Oncorhynchus tshawytscha isolate Ot180627B linkage group LG34, Otsh_v2.0, whole genome shotgun sequence.
type: Entry
definition: Oncorhynchus tshawytscha isolate Ot180627B linkage group LG34, Otsh_v2.0, whole genome shotgun sequence.
sequence version: NC_056462.1
sequence date: 2021-07-08
sequence: sequence
division: CON
label: NC_056462.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA432585
dblink: SAMN17219827
keyword: WGS
keyword: RefSeq
source: Oncorhynchus tshawytscha (Chinook salmon)
organism: Oncorhynchus tshawytscha
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
reference: 1
references: 29621340
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM031232.1.\nAssembly name: Otsh_v2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Fisheries and Oceans Canada\non 2021/05/07. The original whole-genome shotgun project has the\naccession JAEPEU000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Fisheries and Oceans Canada\nAssembly Date :: NOV-2020\nAssembly Method :: Flye v. 2.6-g6f887ae; Racon v. 1.4.16;\n Pilon v. 1.22; Pilon v. 1.22; Chromonomer\n v. 1.10; Ragtag v. 1.0.1; Custom v. 1.0\nAssembly Name :: Otsh_v2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 130.0x\nSequencing Technology :: Oxford Nanopore MinION; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oncorhynchus tshawytscha Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 15889890
topology: linear
so has quality: SO_0000987
location: 1..15889890
location: region:1-15889890:1
RO_0002162: 74940

NC_056462
type: RefSeq
SIO_000068: refseq

PRJNA432585
type: BioProject
SIO_000068: bioproject

SAMN17219827
type: BioSample
SIO_000068: biosample

1
title: Chinook salmon (Oncorhynchus tshawytscha) genome and transcriptome
author: Christensen, K.A.
author: Leong, J.S.
author: Sakhrani, D.
author: Biagi, C.A.
author: Minkley, D.R.
author: Withler, R.E.
author: Rondeau, E.B.
author: Koop, B.F.
author: Devlin, R.H.
journal: PLoS One 13 (4), e0195461 (2018)
pubmed: 29621340
comments: Publication Status: Online-Only

29621340
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15889890:1
position: 15889890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15889890:1:source
so part of: sequence
organism: Oncorhynchus tshawytscha
mol type: genomic DNA
isolate: Ot180627B
sex: male
tissue type: blood
dev stage: Mature
country: Canada: British Columbia, Capilano River
linkage group: LG34

74940
type: Taxonomy
SIO_000068: taxonomy

cntrob
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: cntrob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17893..55536
location: region:17893-55536:1
so has part: feature:17893-55536:1:exon
subclass of: SO_0000010

112238038
type: Gene
SIO_000068: ncbigene

position:17893:1
position: 17893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55536:1
position: 55536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17893-55536:1:exon

cntrob
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: cntrob
product: centrobin, centrosomal BRCA2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_024406639.2
SIO_010081: cntrob
subclass of: SO_0000673
so part of: cntrob
location: join(17893..18204,18837..19103,19261..19449,19531..19618,28556..28622,28747..28876,29158..29274,31045..31161,31381..31479,31567..31770,32062..32229,32346..32452,38099..38203,38322..38463,38714..38888,39387..39587,45718..45917,53382..53436,53553..53663,53763..53862,55368..55536)
location: region:17893-55536:1
so has part: feature:17893-18204:1:exon
so has part: feature:18837-19103:1:exon
so has part: feature:19261-19449:1:exon
so has part: feature:19531-19618:1:exon
so has part: feature:28556-28622:1:exon
so has part: feature:28747-28876:1:exon
so has part: feature:29158-29274:1:exon
so has part: feature:31045-31161:1:exon
so has part: feature:31381-31479:1:exon
so has part: feature:31567-31770:1:exon
so has part: feature:32062-32229:1:exon
so has part: feature:32346-32452:1:exon
so has part: feature:38099-38203:1:exon
so has part: feature:38322-38463:1:exon
so has part: feature:38714-38888:1:exon
so has part: feature:39387-39587:1:exon
so has part: feature:45718-45917:1:exon
so has part: feature:53382-53436:1:exon
so has part: feature:53553-53663:1:exon
so has part: feature:53763-53862:1:exon
so has part: feature:55368-55536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17893-18204:1:exon

position:18204:1
position: 18204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18837-19103:1:exon

position:18837:1
position: 18837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19103:1
position: 19103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19261-19449:1:exon

position:19261:1
position: 19261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19449:1
position: 19449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19531-19618:1:exon

position:19531:1
position: 19531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19618:1
position: 19618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28556-28622:1:exon

position:28556:1
position: 28556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28622:1
position: 28622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28747-28876:1:exon

position:28747:1
position: 28747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28876:1
position: 28876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:29158-29274:1:exon

position:29158:1
position: 29158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29274:1
position: 29274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31045-31161:1:exon

position:31045:1
position: 31045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31161:1
position: 31161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31381-31479:1:exon

position:31381:1
position: 31381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31479:1
position: 31479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31567-31770:1:exon

position:31567:1
position: 31567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31770:1
position: 31770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:32062-32229:1:exon

position:32062:1
position: 32062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32229:1
position: 32229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:32346-32452:1:exon

position:32346:1
position: 32346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32452:1
position: 32452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:38099-38203:1:exon

position:38099:1
position: 38099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38203:1
position: 38203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:38322-38463:1:exon

position:38322:1
position: 38322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38463:1
position: 38463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:38714-38888:1:exon

position:38714:1
position: 38714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38888:1
position: 38888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:39387-39587:1:exon

position:39387:1
position: 39387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39587:1
position: 39587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:45718-45917:1:exon

position:45718:1
position: 45718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45917:1
position: 45917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:53382-53436:1:exon

position:53382:1
position: 53382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53436:1
position: 53436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:53553-53663:1:exon

position:53553:1
position: 53553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53663:1
position: 53663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:53763-53862:1:exon

position:53763:1
position: 53763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53862:1
position: 53862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:55368-55536:1:exon

position:55368:1
position: 55368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cntrob
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: cntrob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrobin
translation: MARSPLNLHTPSPGGRQEEEGEEDRVLVEEMGDNLNTSVDYSSRLTNGRRHIQDMENVRAHLQTMLRSTPTLETEGGSSVTESPNQSFNSDSTSQLLGGGVGGLEELFPRYSSRLRSDGVFSSPEATVLRESLDRERTSRKQCERHVLVLQSKALELQQRLALALSADRKKDVMIEQLDKTLAKVVEGWRKHEQEKSEGVKRLQQEKELAERLHTKQQETLGQLEQSLAQVAEALEQEQKHTEELQRTNRQLELRLVELEGSLCDCRRECELLCVERDGLHLHAQEAQTALTCLQEQTANERRSLEDQTVQLANQLQEERECKQREEQHLLEVRQVLEEVRGELAKMRGRLLQLEEEKLEARREWDTERMDWALEQARFEAQHSQLEVKLKQETERLSASQQEHIALKEQHRNQLLDLSARHERELSSQLQQHQQHILTLTQDYQTRLAHSKQQSVLLEESRRRLEGQREELVSRLQSLLRSHWTEALRLLSTQAEGSSLPSLWDEPKDWMNQHLLQEPSSSSHITVQYRAAADTHMVQREQEGEEVAHLAQDAQAVVLRLSRERGELSGEGEARAITEGRERSWERGAGREGSGNLSVLNHTLSFNLLEPQLDTTNMTAGLEELCDRGGDLRGCVVEEEEHKGERQRAESGERQQWAERGPSLTSGPSPSFDPGRRSELQYYVSMLLDRSPGEPVESPAQDNTGLGSSWDSVKIQLHAPLETPSSPGDQTRHPTCNPTSTGQVSAQLRSLLAQFPSQPDRAARSLQLLSMLTHGSDGECEEKPSRLKKSEPLLRNSGVSRVTSQGSGVRGQVPGMRGRRGWQGRGGAWR
SIO_010081: cntrob
subclass of: SO_0000673
so part of: cntrob
location: join(19312..19449,19531..19618,28556..28622,28747..28876,29158..29274,31045..31161,31381..31479,31567..31770,32062..32229,32346..32452,38099..38203,38322..38463,38714..38888,39387..39587,45718..45917,53382..53436,53553..53663,53763..53862,55368..55536)
location: region:19312-55536:1
so has part: feature:19312-19449:1:exon
so has part: feature:19531-19618:1:exon
so has part: feature:28556-28622:1:exon
so has part: feature:28747-28876:1:exon
so has part: feature:29158-29274:1:exon
so has part: feature:31045-31161:1:exon
so has part: feature:31381-31479:1:exon
so has part: feature:31567-31770:1:exon
so has part: feature:32062-32229:1:exon
so has part: feature:32346-32452:1:exon
so has part: feature:38099-38203:1:exon
so has part: feature:38322-38463:1:exon
so has part: feature:38714-38888:1:exon
so has part: feature:39387-39587:1:exon
so has part: feature:45718-45917:1:exon
so has part: feature:53382-53436:1:exon
so has part: feature:53553-53663:1:exon
so has part: feature:53763-53862:1:exon
so has part: feature:55368-55536:1:exon

XP_024262407.1
type: Protein
SIO_000068: ncbiprotein

position:19312:1
position: 19312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19312-19449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19531-19618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28556-28622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28747-28876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29158-29274:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31045-31161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31381-31479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31567-31770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32062-32229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32346-32452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:38099-38203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38322-38463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38714-38888:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:39387-39587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:45718-45917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:53382-53436:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:53553-53663:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:53763-53862:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:55368-55536:1:exon

LOC121841770
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22569..26450
location: region:22569-26450:1
so has part: feature:22569-26450:1:exon
subclass of: SO_0000011

121841770
type: Gene
SIO_000068: ncbigene

position:22569:1
position: 22569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26450:1
position: 26450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22569-26450:1:exon

LOC121841770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841770
product: uncharacterized LOC121841770
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006080746.1
SIO_010081: LOC121841770
subclass of: SO_0000673
so part of: LOC121841770
location: join(22569..22704,23401..26450)
location: region:22569-26450:1
so has part: feature:22569-22704:1:exon
so has part: feature:23401-26450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22569-22704:1:exon

position:22704:1
position: 22704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23401-26450:1:exon

position:23401:1
position: 23401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231574
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(98140..140749)
location: region:98140-140749:-1
so has part: feature:98140-140749:-1:exon
subclass of: SO_0000010

112231574
type: Gene
SIO_000068: ncbigene

position:98140:-1
position: 98140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140749:-1
position: 140749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98140-140749:-1:exon

LOC112231574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231574
product: TBC1 domain family member 2A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311771.1
SIO_010081: LOC112231574
subclass of: SO_0000673
so part of: LOC112231574
location: complement(join(98140..98493,118876..118997,120182..120367,128703..128823,132536..133057,133372..133541,135371..135481,135877..136245,136498..136709,136983..137113,137572..137738,139935..140264,140626..140749))
location: region:98140-140749:-1
so has part: feature:140626-140749:-1:exon
so has part: feature:139935-140264:-1:exon
so has part: feature:137572-137738:-1:exon
so has part: feature:136983-137113:-1:exon
so has part: feature:136498-136709:-1:exon
so has part: feature:135877-136245:-1:exon
so has part: feature:135371-135481:-1:exon
so has part: feature:133372-133541:-1:exon
so has part: feature:132536-133057:-1:exon
so has part: feature:128703-128823:-1:exon
so has part: feature:120182-120367:-1:exon
so has part: feature:118876-118997:-1:exon
so has part: feature:98140-98493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140626-140749:-1:exon

position:140626:-1
position: 140626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139935-140264:-1:exon

position:139935:-1
position: 139935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140264:-1
position: 140264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137572-137738:-1:exon

position:137572:-1
position: 137572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137738:-1
position: 137738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136983-137113:-1:exon

position:136983:-1
position: 136983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137113:-1
position: 137113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136498-136709:-1:exon

position:136498:-1
position: 136498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136709:-1
position: 136709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:135877-136245:-1:exon

position:135877:-1
position: 135877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136245:-1
position: 136245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135371-135481:-1:exon

position:135371:-1
position: 135371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135481:-1
position: 135481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133372-133541:-1:exon

position:133372:-1
position: 133372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133541:-1
position: 133541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:132536-133057:-1:exon

position:132536:-1
position: 132536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133057:-1
position: 133057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128703-128823:-1:exon

position:128703:-1
position: 128703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128823:-1
position: 128823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:120182-120367:-1:exon

position:120182:-1
position: 120182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120367:-1
position: 120367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:118876-118997:-1:exon

position:118876:-1
position: 118876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118997:-1
position: 118997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98140-98493:-1:exon

position:98493:-1
position: 98493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2A
translation: MNDIAFQNKDGDSFPTESRKQSPVVSAAATLCGYLDKLSGPLKVWRSLWFIYEEKECQLVYYKCAQDVNPLGWIDLSNAILGDLPQADQRTFYIQTPERTFTLKAVNCESMIYWLKQLQLKRWHHGNISGKLGMVTSHHALRRYATLSDVLLRHTPTGIHKEYLLRSRSSQELSHSLSWEELWDPFLPLKDIQAPPYFDQDKSPPKTNIEPSGPKTQWVQEIEAPKGHQSSLSCEGSSSNPADKTASPQQEEPPDTARLQQEVLSLAGQVKAQKDLVSLLQKALELAQQEKLTPAVESPRSECEWKSSNSQPWNQGECNTDHSYGLQVAPLLRHDCVAESQDHLRLLAERNQAERELVLRLSQQVAESLTDPQRSLVRGWTVLETQEQLRQEIRNLKDNIEAYKTQNTYLNAEIYTLTKEWRKSTEQEKCLMIKCAHLEAKVFRMESRSLTVLFKLQESRGLERHREAIKTLITDTLREGGRDILELNPARDYDEYGFRISTDIQMDDMKLLAKLQALGIHSHDPPQQQKDGEEEGDSERLWGRWAQHFDGRRSDKAVASPKLKGLLRKGVPHYYRSRVWRWIVWSRTRSLREGQPHWYQQICFRSQAASAHRVSQQIWLDLETTLRGNRHFSFPAKRAVRQLHRILLAFSCHNRSVGYCQGLNRLAAMALLVLQSEEDAFWCLVAIVETIMPQDFYGKTLTASQVEQRVLKDFMAEKMPRLTAHFHCHGVDVSLVTSDWFLAAFVERLTSDILLRIWDAFLYEGTKVIFRYALALFKYTEEDILKIHHSVDIYQYLRFITRTITDSRRLTTIAFSDMNPFPFRLLRQRRALHLQCVHVQLSELERIQRELGRERRQHKDRELGLVSSEDEGDT
SIO_010081: LOC112231574
subclass of: SO_0000673
so part of: LOC112231574
location: complement(join(98292..98493,118876..118997,120182..120367,128703..128823,132536..133057,133372..133541,135371..135481,135877..136245,136498..136709,136983..137113,137572..137738,139935..140246))
location: region:98292-140246:-1
so has part: feature:139935-140246:-1:exon
so has part: feature:137572-137738:-1:exon
so has part: feature:136983-137113:-1:exon
so has part: feature:136498-136709:-1:exon
so has part: feature:135877-136245:-1:exon
so has part: feature:135371-135481:-1:exon
so has part: feature:133372-133541:-1:exon
so has part: feature:132536-133057:-1:exon
so has part: feature:128703-128823:-1:exon
so has part: feature:120182-120367:-1:exon
so has part: feature:118876-118997:-1:exon
so has part: feature:98292-98493:-1:exon

XP_042167705.1
type: Protein
SIO_000068: ncbiprotein

position:98292:-1
position: 98292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140246:-1
position: 140246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139935-140246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137572-137738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136983-137113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136498-136709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135877-136245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135371-135481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133372-133541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132536-133057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128703-128823:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120182-120367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:118876-118997:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98292-98493:-1:exon

LOC112231652
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 158260..179756
location: region:158260-179756:1
so has part: feature:158260-179756:1:exon
subclass of: SO_0000010

112231652
type: Gene
SIO_000068: ncbigene

position:158260:1
position: 158260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179756:1
position: 179756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158260-179756:1:exon

LOC112231652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231652
product: dnaJ homolog subfamily A member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398347.2
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(158260..158318,160816..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..179756)
location: region:158260-179756:1
so has part: feature:158260-158318:1:exon
so has part: feature:160816-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-179756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158260-158318:1:exon

position:158318:1
position: 158318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160816-160963:1:exon

position:160816:1
position: 160816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160963:1
position: 160963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161734-161917:1:exon

position:161734:1
position: 161734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161917:1
position: 161917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162049-162153:1:exon

position:162049:1
position: 162049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162153:1
position: 162153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162645-162872:1:exon

position:162645:1
position: 162645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162872:1
position: 162872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167857-167971:1:exon

position:167857:1
position: 167857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167971:1
position: 167971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168696-168811:1:exon

position:168696:1
position: 168696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168811:1
position: 168811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176402-176502:1:exon

position:176402:1
position: 176402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176502:1
position: 176502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:178649-179756:1:exon

position:178649:1
position: 178649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231652
product: dnaJ homolog subfamily A member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398345.2
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(158618..158776,160816..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..179756)
location: region:158618-179756:1
so has part: feature:158618-158776:1:exon
so has part: feature:160816-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-179756:1:exon

position:158618:1
position: 158618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158618-158776:1:exon

position:158776:1
position: 158776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160816-160963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161734-161917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162049-162153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162645-162872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167857-167971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168696-168811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176402-176502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178649-179756:1:exon

LOC112231652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231652
product: dnaJ homolog subfamily A member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398346.2
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(158790..158932,160816..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..179756)
location: region:158790-179756:1
so has part: feature:158790-158932:1:exon
so has part: feature:160816-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-179756:1:exon

position:158790:1
position: 158790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158790-158932:1:exon

position:158932:1
position: 158932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160816-160963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161734-161917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162049-162153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162645-162872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167857-167971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168696-168811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176402-176502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178649-179756:1:exon

LOC112231652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1
translation: MVKETGFYDMLGVKPNATPDELKKAYRKLALKYHPDKNPTEGEKFKQISQAYEVLSDSQKREVYDRGGEKAIKGGGSGGGGGFGSPMDIFDMFFGGGGRLHRERRGKNVVHQLTVSLEDLFNGATRKLAVQKNVICERCEGRGGRKGAVEMCMSCHGTGMQVRLHQLGPGMVQQVSTVCGGCQGQGQRISHKDRCKACSGRKILRQKKILEVHIGKGMKDGQKLVFHGEGDQEPGLEPGDIIIVLDQRVHPVFTRQGDNLIMTMELQLVEALCGFQKPCQTLDNRSLLITCHPGELIKPGDKKCVMNEGMPMHRRPFEKGRLIILFSVVFPEANFLPKHKLKELEHYLPAKREAEQPESMDDDLYIYTDLEDCDPARVRRSQYHYMEEDDNPSAGGVQCQTS
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(160832..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..178876)
location: region:160832-178876:1
so has part: feature:160832-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-178876:1:exon

XP_024254113.1
type: Protein
SIO_000068: ncbiprotein

position:160832:1
position: 160832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178876:1
position: 178876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160832-160963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161734-161917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162049-162153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162645-162872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167857-167971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168696-168811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176402-176502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178649-178876:1:exon

LOC112231652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1
translation: MVKETGFYDMLGVKPNATPDELKKAYRKLALKYHPDKNPTEGEKFKQISQAYEVLSDSQKREVYDRGGEKAIKGGGSGGGGGFGSPMDIFDMFFGGGGRLHRERRGKNVVHQLTVSLEDLFNGATRKLAVQKNVICERCEGRGGRKGAVEMCMSCHGTGMQVRLHQLGPGMVQQVSTVCGGCQGQGQRISHKDRCKACSGRKILRQKKILEVHIGKGMKDGQKLVFHGEGDQEPGLEPGDIIIVLDQRVHPVFTRQGDNLIMTMELQLVEALCGFQKPCQTLDNRSLLITCHPGELIKPGDKKCVMNEGMPMHRRPFEKGRLIILFSVVFPEANFLPKHKLKELEHYLPAKREAEQPESMDDDLYIYTDLEDCDPARVRRSQYHYMEEDDNPSAGGVQCQTS
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(160832..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..178876)
location: region:160832-178876:1
so has part: feature:160832-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-178876:1:exon

XP_024254114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160832-160963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161734-161917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162049-162153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162645-162872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167857-167971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168696-168811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176402-176502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178649-178876:1:exon

LOC112231652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1
translation: MVKETGFYDMLGVKPNATPDELKKAYRKLALKYHPDKNPTEGEKFKQISQAYEVLSDSQKREVYDRGGEKAIKGGGSGGGGGFGSPMDIFDMFFGGGGRLHRERRGKNVVHQLTVSLEDLFNGATRKLAVQKNVICERCEGRGGRKGAVEMCMSCHGTGMQVRLHQLGPGMVQQVSTVCGGCQGQGQRISHKDRCKACSGRKILRQKKILEVHIGKGMKDGQKLVFHGEGDQEPGLEPGDIIIVLDQRVHPVFTRQGDNLIMTMELQLVEALCGFQKPCQTLDNRSLLITCHPGELIKPGDKKCVMNEGMPMHRRPFEKGRLIILFSVVFPEANFLPKHKLKELEHYLPAKREAEQPESMDDDLYIYTDLEDCDPARVRRSQYHYMEEDDNPSAGGVQCQTS
SIO_010081: LOC112231652
subclass of: SO_0000673
so part of: LOC112231652
location: join(160832..160963,161734..161917,162049..162153,162645..162872,167857..167971,168696..168811,176402..176502,178649..178876)
location: region:160832-178876:1
so has part: feature:160832-160963:1:exon
so has part: feature:161734-161917:1:exon
so has part: feature:162049-162153:1:exon
so has part: feature:162645-162872:1:exon
so has part: feature:167857-167971:1:exon
so has part: feature:168696-168811:1:exon
so has part: feature:176402-176502:1:exon
so has part: feature:178649-178876:1:exon

XP_024254115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160832-160963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161734-161917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162049-162153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162645-162872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167857-167971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168696-168811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176402-176502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178649-178876:1:exon

LOC121841771
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174508..176277
location: region:174508-176277:1
so has part: feature:174508-176277:1:exon
subclass of: SO_0000011

121841771
type: Gene
SIO_000068: ncbigene

position:174508:1
position: 174508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176277:1
position: 176277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174508-176277:1:exon

LOC121841771
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841771
product: uncharacterized LOC121841771
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006080747.1
SIO_010081: LOC121841771
subclass of: SO_0000673
so part of: LOC121841771
location: join(174508..175955,176085..176277)
location: region:174508-176277:1
so has part: feature:174508-175955:1:exon
so has part: feature:176085-176277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174508-175955:1:exon

position:175955:1
position: 175955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176085-176277:1:exon

position:176085:1
position: 176085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121841826
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199694..202275)
location: region:199694-202275:-1
so has part: feature:199694-202275:-1:exon
subclass of: SO_0000011

121841826
type: Gene
SIO_000068: ncbigene

position:199694:-1
position: 199694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202275:-1
position: 202275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199694-202275:-1:exon

LOC121841826
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841826
product: uncharacterized LOC121841826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006080780.1
SIO_010081: LOC121841826
subclass of: SO_0000673
so part of: LOC121841826
location: complement(join(199694..200009,201628..201812,202161..202275))
location: region:199694-202275:-1
so has part: feature:202161-202275:-1:exon
so has part: feature:201628-201812:-1:exon
so has part: feature:199694-200009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202161-202275:-1:exon

position:202161:-1
position: 202161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201628-201812:-1:exon

position:201628:-1
position: 201628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201812:-1
position: 201812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199694-200009:-1:exon

position:200009:-1
position: 200009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231653
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231653
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202430..206120
location: region:202430-206120:1
so has part: feature:202430-206120:1:exon
subclass of: SO_0000010

112231653
type: Gene
SIO_000068: ncbigene

position:202430:1
position: 202430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206120:1
position: 206120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202430-206120:1:exon

LOC112231653
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231653
product: perilipin-2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398348.2
SIO_010081: LOC112231653
subclass of: SO_0000673
so part of: LOC112231653
location: join(202430..202682,202839..202876,203113..203308,203434..203516,203624..203876,204118..204305,205086..205151,205458..206120)
location: region:202430-206120:1
so has part: feature:202430-202682:1:exon
so has part: feature:202839-202876:1:exon
so has part: feature:203113-203308:1:exon
so has part: feature:203434-203516:1:exon
so has part: feature:203624-203876:1:exon
so has part: feature:204118-204305:1:exon
so has part: feature:205086-205151:1:exon
so has part: feature:205458-206120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202430-202682:1:exon

position:202682:1
position: 202682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202839-202876:1:exon

position:202839:1
position: 202839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202876:1
position: 202876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203113-203308:1:exon

position:203113:1
position: 203113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203308:1
position: 203308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203434-203516:1:exon

position:203434:1
position: 203434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203516:1
position: 203516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203624-203876:1:exon

position:203624:1
position: 203624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203876:1
position: 203876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:204118-204305:1:exon

position:204118:1
position: 204118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204305:1
position: 204305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:205086-205151:1:exon

position:205086:1
position: 205086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205151:1
position: 205151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205458-206120:1:exon

position:205458:1
position: 205458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231653
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231653
product: perilipin-2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398349.2
SIO_010081: LOC112231653
subclass of: SO_0000673
so part of: LOC112231653
location: join(202433..202667,202839..202876,203113..203308,203434..203516,203624..203876,204118..204305,205086..205151,205458..206120)
location: region:202433-206120:1
so has part: feature:202433-202667:1:exon
so has part: feature:202839-202876:1:exon
so has part: feature:203113-203308:1:exon
so has part: feature:203434-203516:1:exon
so has part: feature:203624-203876:1:exon
so has part: feature:204118-204305:1:exon
so has part: feature:205086-205151:1:exon
so has part: feature:205458-206120:1:exon

position:202433:1
position: 202433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202433-202667:1:exon

position:202667:1
position: 202667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202839-202876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203113-203308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203434-203516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203624-203876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204118-204305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205086-205151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205458-206120:1:exon

LOC112231653
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231653
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perilipin-2-like isoform X1
translation: MVQGTSQERMWFYEEHAGKSLAGPNMMPGNLNSSQNVVFRLANLPMVSSACALVSVLYCDTKHNHPYIRSLCKVVEISVTTLSSVACNSATPIIIKLEPQISVVNDLACKGLDKLESTLPVLQQPSQQIVSDVKNIMMEAKDAVVIAVYGAKNCMYYTLTGMVAMTKGASGGRANIVSLEPAVQLVSMGLKNALSLSETLVDQALPPTDEEMEDEVKTVKGFDVVAAARPSSPVRLVSLTVKLCRRAYHQAEEKMRFVKVCCQKSLNLLQHTMHLDNLGALVEWTSNLQEKEDKETERVVIHCLNVSPSVSHQLQRNCLTLACSLQNLPATSSSRLCVCCFLPHRS
SIO_010081: LOC112231653
subclass of: SO_0000673
so part of: LOC112231653
location: join(202616..202682,202839..202876,203113..203308,203434..203516,203624..203876,204118..204305,205086..205151,205458..205607)
location: region:202616-205607:1
so has part: feature:202616-202682:1:exon
so has part: feature:202839-202876:1:exon
so has part: feature:203113-203308:1:exon
so has part: feature:203434-203516:1:exon
so has part: feature:203624-203876:1:exon
so has part: feature:204118-204305:1:exon
so has part: feature:205086-205151:1:exon
so has part: feature:205458-205607:1:exon

XP_024254116.2
type: Protein
SIO_000068: ncbiprotein

position:202616:1
position: 202616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205607:1
position: 205607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202616-202682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202839-202876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203113-203308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203434-203516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203624-203876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204118-204305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205086-205151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205458-205607:1:exon

LOC112231653
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231653
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perilipin-2-like isoform X2
translation: MVQGTSQERMWFYEEHAGPNMMPGNLNSSQNVVFRLANLPMVSSACALVSVLYCDTKHNHPYIRSLCKVVEISVTTLSSVACNSATPIIIKLEPQISVVNDLACKGLDKLESTLPVLQQPSQQIVSDVKNIMMEAKDAVVIAVYGAKNCMYYTLTGMVAMTKGASGGRANIVSLEPAVQLVSMGLKNALSLSETLVDQALPPTDEEMEDEVKTVKGFDVVAAARPSSPVRLVSLTVKLCRRAYHQAEEKMRFVKVCCQKSLNLLQHTMHLDNLGALVEWTSNLQEKEDKETERVVIHCLNVSPSVSHQLQRNCLTLACSLQNLPATSSSRLCVCCFLPHRS
SIO_010081: LOC112231653
subclass of: SO_0000673
so part of: LOC112231653
location: join(202616..202667,202839..202876,203113..203308,203434..203516,203624..203876,204118..204305,205086..205151,205458..205607)
location: region:202616-205607:1
so has part: feature:202616-202667:1:exon
so has part: feature:202839-202876:1:exon
so has part: feature:203113-203308:1:exon
so has part: feature:203434-203516:1:exon
so has part: feature:203624-203876:1:exon
so has part: feature:204118-204305:1:exon
so has part: feature:205086-205151:1:exon
so has part: feature:205458-205607:1:exon

XP_024254117.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202616-202667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202839-202876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203113-203308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203434-203516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203624-203876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204118-204305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205086-205151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205458-205607:1:exon

LOC121841825
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216782..220164)
location: region:216782-220164:-1
so has part: feature:216782-220164:-1:exon
subclass of: SO_0000011

121841825
type: Gene
SIO_000068: ncbigene

position:216782:-1
position: 216782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220164:-1
position: 220164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216782-220164:-1:exon

LOC121841825
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841825
product: uncharacterized LOC121841825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006080779.1
SIO_010081: LOC121841825
subclass of: SO_0000673
so part of: LOC121841825
location: complement(join(216782..217809,219427..219611,219959..220164))
location: region:216782-220164:-1
so has part: feature:219959-220164:-1:exon
so has part: feature:219427-219611:-1:exon
so has part: feature:216782-217809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219959-220164:-1:exon

position:219959:-1
position: 219959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219427-219611:-1:exon

position:219427:-1
position: 219427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219611:-1
position: 219611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216782-217809:-1:exon

position:217809:-1
position: 217809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121838658
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121838658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220271..223920
location: region:220271-223920:1
so has part: feature:220271-223920:1:exon
subclass of: SO_0000010

121838658
type: Gene
SIO_000068: ncbigene

position:220271:1
position: 220271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223920:1
position: 223920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220271-223920:1:exon

LOC121838658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121838658
product: perilipin-2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312133.1
SIO_010081: LOC121838658
subclass of: SO_0000673
so part of: LOC121838658
location: join(220271..220481,220639..220676,220913..221108,221234..221316,221424..221676,221918..222105,222885..222950,223257..223920)
location: region:220271-223920:1
so has part: feature:220271-220481:1:exon
so has part: feature:220639-220676:1:exon
so has part: feature:220913-221108:1:exon
so has part: feature:221234-221316:1:exon
so has part: feature:221424-221676:1:exon
so has part: feature:221918-222105:1:exon
so has part: feature:222885-222950:1:exon
so has part: feature:223257-223920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220271-220481:1:exon

position:220481:1
position: 220481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220639-220676:1:exon

position:220639:1
position: 220639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220676:1
position: 220676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220913-221108:1:exon

position:220913:1
position: 220913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221108:1
position: 221108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221234-221316:1:exon

position:221234:1
position: 221234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221316:1
position: 221316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221424-221676:1:exon

position:221424:1
position: 221424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221676:1
position: 221676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221918-222105:1:exon

position:221918:1
position: 221918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222105:1
position: 222105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222885-222950:1:exon

position:222885:1
position: 222885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222950:1
position: 222950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:223257-223920:1:exon

position:223257:1
position: 223257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121838658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121838658
product: perilipin-2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312134.1
SIO_010081: LOC121838658
subclass of: SO_0000673
so part of: LOC121838658
location: join(220272..220466,220639..220676,220913..221108,221234..221316,221424..221676,221918..222105,222885..222950,223257..223920)
location: region:220272-223920:1
so has part: feature:220272-220466:1:exon
so has part: feature:220639-220676:1:exon
so has part: feature:220913-221108:1:exon
so has part: feature:221234-221316:1:exon
so has part: feature:221424-221676:1:exon
so has part: feature:221918-222105:1:exon
so has part: feature:222885-222950:1:exon
so has part: feature:223257-223920:1:exon

position:220272:1
position: 220272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220272-220466:1:exon

position:220466:1
position: 220466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220639-220676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220913-221108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221234-221316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221424-221676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221918-222105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222885-222950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223257-223920:1:exon

LOC121838658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121838658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perilipin-2-like isoform X1
translation: MVQGTSQERMWFYEEHAGKSLAGPNMMPGNLNSSQNVVFRLANLPMVSSACALVSVLYCDTKHNHPYIRSLCKVVEISVTTLSSVACNSATPIIIKLEPQISVVNDLACKGLDKLESTLPVLQQPSQQIVSDVKNIMMEAKDAVVIAVYGAKNCMYYTLTGMVAMTKGASGGRANIVSLEPAVQLVSMGLKNALSLSETLVDQALPPTDEEMEDEVKTVKGFDVVAAARPSSPVRLVSLTVKLCRRAYHQAEEKMRFVKVCCQKSLNLLQHTMHLDNLGALVEWTSNLQEKEDKETERVVIHCLNVSPSVSHQLQRNCLTLACSLQNLPRYLQQQAVCVLLSASQILNNFSSTDPHLGIRPQGKVSGSLDAILDYLVHNMSLNCLVGPWCPQMPPITPRAQTNGQRKRPAKKTGVFDLGCTVSPYEQY
SIO_010081: LOC121838658
subclass of: SO_0000673
so part of: LOC121838658
location: join(220415..220481,220639..220676,220913..221108,221234..221316,221424..221676,221918..222105,222885..222950,223257..223652)
location: region:220415-223652:1
so has part: feature:220415-220481:1:exon
so has part: feature:220639-220676:1:exon
so has part: feature:220913-221108:1:exon
so has part: feature:221234-221316:1:exon
so has part: feature:221424-221676:1:exon
so has part: feature:221918-222105:1:exon
so has part: feature:222885-222950:1:exon
so has part: feature:223257-223652:1:exon

XP_042168067.1
type: Protein
SIO_000068: ncbiprotein

position:220415:1
position: 220415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223652:1
position: 223652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220415-220481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220639-220676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220913-221108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221234-221316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221424-221676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221918-222105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222885-222950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223257-223652:1:exon

LOC121838658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121838658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perilipin-2-like isoform X2
translation: MVQGTSQERMWFYEEHAGPNMMPGNLNSSQNVVFRLANLPMVSSACALVSVLYCDTKHNHPYIRSLCKVVEISVTTLSSVACNSATPIIIKLEPQISVVNDLACKGLDKLESTLPVLQQPSQQIVSDVKNIMMEAKDAVVIAVYGAKNCMYYTLTGMVAMTKGASGGRANIVSLEPAVQLVSMGLKNALSLSETLVDQALPPTDEEMEDEVKTVKGFDVVAAARPSSPVRLVSLTVKLCRRAYHQAEEKMRFVKVCCQKSLNLLQHTMHLDNLGALVEWTSNLQEKEDKETERVVIHCLNVSPSVSHQLQRNCLTLACSLQNLPRYLQQQAVCVLLSASQILNNFSSTDPHLGIRPQGKVSGSLDAILDYLVHNMSLNCLVGPWCPQMPPITPRAQTNGQRKRPAKKTGVFDLGCTVSPYEQY
SIO_010081: LOC121838658
subclass of: SO_0000673
so part of: LOC121838658
location: join(220415..220466,220639..220676,220913..221108,221234..221316,221424..221676,221918..222105,222885..222950,223257..223652)
location: region:220415-223652:1
so has part: feature:220415-220466:1:exon
so has part: feature:220639-220676:1:exon
so has part: feature:220913-221108:1:exon
so has part: feature:221234-221316:1:exon
so has part: feature:221424-221676:1:exon
so has part: feature:221918-222105:1:exon
so has part: feature:222885-222950:1:exon
so has part: feature:223257-223652:1:exon

XP_042168068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220415-220466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220639-220676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220913-221108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221234-221316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221424-221676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221918-222105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222885-222950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223257-223652:1:exon

LOC112231654
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232800..236329)
location: region:232800-236329:-1
so has part: feature:232800-236329:-1:exon
subclass of: SO_0000010

112231654
type: Gene
SIO_000068: ncbigene

position:232800:-1
position: 232800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236329:-1
position: 236329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232800-236329:-1:exon

LOC112231654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231654
product: 40S ribosomal protein S6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398350.2
SIO_010081: LOC112231654
subclass of: SO_0000673
so part of: LOC112231654
location: complement(join(232800..232927,233192..233349,233888..234034,234581..234791,235260..235391,236246..236329))
location: region:232800-236329:-1
so has part: feature:236246-236329:-1:exon
so has part: feature:235260-235391:-1:exon
so has part: feature:234581-234791:-1:exon
so has part: feature:233888-234034:-1:exon
so has part: feature:233192-233349:-1:exon
so has part: feature:232800-232927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236246-236329:-1:exon

position:236246:-1
position: 236246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235260-235391:-1:exon

position:235260:-1
position: 235260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235391:-1
position: 235391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234581-234791:-1:exon

position:234581:-1
position: 234581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234791:-1
position: 234791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233888-234034:-1:exon

position:233888:-1
position: 233888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234034:-1
position: 234034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233192-233349:-1:exon

position:233192:-1
position: 233192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233349:-1
position: 233349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232800-232927:-1:exon

position:232927:-1
position: 232927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S6
translation: MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYVVRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK
SIO_010081: LOC112231654
subclass of: SO_0000673
so part of: LOC112231654
location: complement(join(232832..232927,233192..233349,233888..234034,234581..234791,235260..235391,236246..236251))
location: region:232832-236251:-1
so has part: feature:236246-236251:-1:exon
so has part: feature:235260-235391:-1:exon
so has part: feature:234581-234791:-1:exon
so has part: feature:233888-234034:-1:exon
so has part: feature:233192-233349:-1:exon
so has part: feature:232832-232927:-1:exon

XP_024254118.1
type: Protein
SIO_000068: ncbiprotein

position:232832:-1
position: 232832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236251:-1
position: 236251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236246-236251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235260-235391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234581-234791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233888-234034:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233192-233349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232832-232927:-1:exon

LOC112231655
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 239556..273398
location: region:239556-273398:1
so has part: feature:239556-273398:1:exon
subclass of: SO_0000010

112231655
type: Gene
SIO_000068: ncbigene

position:239556:1
position: 239556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273398:1
position: 273398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239556-273398:1:exon

LOC112231655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231655
product: alkaline ceramidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_024398352.2
SIO_010081: LOC112231655
subclass of: SO_0000673
so part of: LOC112231655
location: join(239556..239905,240422..240536,250802..250943,259157..259294,268044..268181,269056..273398)
location: region:239556-273398:1
so has part: feature:239556-239905:1:exon
so has part: feature:240422-240536:1:exon
so has part: feature:250802-250943:1:exon
so has part: feature:259157-259294:1:exon
so has part: feature:268044-268181:1:exon
so has part: feature:269056-273398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239556-239905:1:exon

position:239905:1
position: 239905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240422-240536:1:exon

position:240422:1
position: 240422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240536:1
position: 240536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250802-250943:1:exon

position:250802:1
position: 250802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250943:1
position: 250943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259157-259294:1:exon

position:259157:1
position: 259157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259294:1
position: 259294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268044-268181:1:exon

position:268044:1
position: 268044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268181:1
position: 268181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:269056-273398:1:exon

position:269056:1
position: 269056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alkaline ceramidase 2
translation: MTNPMFWDQLQAGSSEVDWCEGNYLIYPSIAEFYNTISNILFFVLPPILMCLFRQYATHFNSGIYLIWILLVVIGIGSTYFHATLSFLGQMLDELSILWVLMCAIGMWFPKRYLPKMFRNDRSRFKVVIGILSGITTGLAFVKPVINSVSLMTLGIPCTVLLITELKRCENPRVFKLGLISGFWWALALLCWISDKIFCEMWSSVNFPYLHCAWHILICLASYLGCVCFAYFDVATEAPERGPVIMFWPNEKWAFIGVPYVTLLCETKKSDSVKVT
SIO_010081: LOC112231655
subclass of: SO_0000673
so part of: LOC112231655
location: join(239798..239905,240422..240536,250802..250943,259157..259294,268044..268181,269056..269245)
location: region:239798-269245:1
so has part: feature:239798-239905:1:exon
so has part: feature:240422-240536:1:exon
so has part: feature:250802-250943:1:exon
so has part: feature:259157-259294:1:exon
so has part: feature:268044-268181:1:exon
so has part: feature:269056-269245:1:exon

XP_024254120.1
type: Protein
SIO_000068: ncbiprotein

position:239798:1
position: 239798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269245:1
position: 269245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239798-239905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240422-240536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250802-250943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259157-259294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268044-268181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269056-269245:1:exon

LOC112231656
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 282467..324072
location: region:282467-324072:1
so has part: feature:282467-324072:1:exon
subclass of: SO_0000010

112231656
type: Gene
SIO_000068: ncbigene

position:282467:1
position: 282467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324072:1
position: 324072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282467-324072:1:exon

LOC112231656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231656
product: tetraspanin-5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398353.2
SIO_010081: LOC112231656
subclass of: SO_0000673
so part of: LOC112231656
location: join(282467..282861,287724..287774,288870..289016,302932..303102,312878..313003,315438..315485,319720..319836,321044..321105,321602..321647,321920..324072)
location: region:282467-324072:1
so has part: feature:282467-282861:1:exon
so has part: feature:287724-287774:1:exon
so has part: feature:288870-289016:1:exon
so has part: feature:302932-303102:1:exon
so has part: feature:312878-313003:1:exon
so has part: feature:315438-315485:1:exon
so has part: feature:319720-319836:1:exon
so has part: feature:321044-321105:1:exon
so has part: feature:321602-321647:1:exon
so has part: feature:321920-324072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282467-282861:1:exon

position:282861:1
position: 282861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287724-287774:1:exon

position:287724:1
position: 287724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287774:1
position: 287774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288870-289016:1:exon

position:288870:1
position: 288870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289016:1
position: 289016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302932-303102:1:exon

position:302932:1
position: 302932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303102:1
position: 303102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312878-313003:1:exon

position:312878:1
position: 312878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313003:1
position: 313003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315438-315485:1:exon

position:315438:1
position: 315438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315485:1
position: 315485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319720-319836:1:exon

position:319720:1
position: 319720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319836:1
position: 319836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321044-321105:1:exon

position:321044:1
position: 321044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321105:1
position: 321105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321602-321647:1:exon

position:321602:1
position: 321602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321647:1
position: 321647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321920-324072:1:exon

position:321920:1
position: 321920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-5
translation: MMSGKYFKAHEVSCCIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENSFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLNFFINNNIRAYRDDIDLQNLIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVINTQCGYDIRAKADSEQMTFIYIKGCVPQFEKWLQDNLTVVAGIFIGIALLQIFGICLAQNLVSDIEVVRESCLFT
SIO_010081: LOC112231656
subclass of: SO_0000673
so part of: LOC112231656
location: join(282778..282861,287724..287774,288870..289016,302932..303102,312878..313003,315438..315485,319720..319836,321044..321105,321602..321614)
location: region:282778-321614:1
so has part: feature:282778-282861:1:exon
so has part: feature:287724-287774:1:exon
so has part: feature:288870-289016:1:exon
so has part: feature:302932-303102:1:exon
so has part: feature:312878-313003:1:exon
so has part: feature:315438-315485:1:exon
so has part: feature:319720-319836:1:exon
so has part: feature:321044-321105:1:exon
so has part: feature:321602-321614:1:exon

XP_024254121.1
type: Protein
SIO_000068: ncbiprotein

position:282778:1
position: 282778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321614:1
position: 321614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282778-282861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287724-287774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288870-289016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302932-303102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312878-313003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315438-315485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319720-319836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321044-321105:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321602-321614:1:exon

LOC112231657
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354921..417580
location: region:354921-417580:1
so has part: feature:354921-417580:1:exon
subclass of: SO_0000010

112231657
type: Gene
SIO_000068: ncbigene

position:354921:1
position: 354921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417580:1
position: 417580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354921-417580:1:exon

LOC112231657
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231657
product: microsomal triglyceride transfer protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398354.2
SIO_010081: LOC112231657
subclass of: SO_0000673
so part of: LOC112231657
location: join(354921..355614,357468..357658,359578..359721,361756..361863,362259..362515,363243..363393,363763..363920,364309..364477,367631..367738,368279..368491,371080..371291,381121..381218,381437..381558,384862..385089,385417..385541,416430..416600,416748..417580)
location: region:354921-417580:1
so has part: feature:354921-355614:1:exon
so has part: feature:357468-357658:1:exon
so has part: feature:359578-359721:1:exon
so has part: feature:361756-361863:1:exon
so has part: feature:362259-362515:1:exon
so has part: feature:363243-363393:1:exon
so has part: feature:363763-363920:1:exon
so has part: feature:364309-364477:1:exon
so has part: feature:367631-367738:1:exon
so has part: feature:368279-368491:1:exon
so has part: feature:371080-371291:1:exon
so has part: feature:381121-381218:1:exon
so has part: feature:381437-381558:1:exon
so has part: feature:384862-385089:1:exon
so has part: feature:385417-385541:1:exon
so has part: feature:416430-416600:1:exon
so has part: feature:416748-417580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354921-355614:1:exon

position:355614:1
position: 355614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357468-357658:1:exon

position:357468:1
position: 357468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357658:1
position: 357658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359578-359721:1:exon

position:359578:1
position: 359578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359721:1
position: 359721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361756-361863:1:exon

position:361756:1
position: 361756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361863:1
position: 361863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362259-362515:1:exon

position:362259:1
position: 362259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362515:1
position: 362515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363243-363393:1:exon

position:363243:1
position: 363243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363393:1
position: 363393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363763-363920:1:exon

position:363763:1
position: 363763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363920:1
position: 363920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:364309-364477:1:exon

position:364309:1
position: 364309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364477:1
position: 364477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:367631-367738:1:exon

position:367631:1
position: 367631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367738:1
position: 367738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368279-368491:1:exon

position:368279:1
position: 368279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368491:1
position: 368491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:371080-371291:1:exon

position:371080:1
position: 371080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371291:1
position: 371291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:381121-381218:1:exon

position:381121:1
position: 381121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381218:1
position: 381218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:381437-381558:1:exon

position:381437:1
position: 381437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381558:1
position: 381558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:384862-385089:1:exon

position:384862:1
position: 384862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385089:1
position: 385089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:385417-385541:1:exon

position:385417:1
position: 385417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385541:1
position: 385541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:416430-416600:1:exon

position:416430:1
position: 416430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416600:1
position: 416600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:416748-417580:1:exon

position:416748:1
position: 416748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231657
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microsomal triglyceride transfer protein
translation: MLALFVLLLCMTSSFSASNRGAGAVGPRLNNDRLYKFSYTTEVLVDRAKGSKDGSAGYRISSDVDVNLVWRDPSSKDDQLIQLVISNVKIKNVAPRSAKKNIFQGATTQSLLGEKKLAALERPFMVHLKNGKVSSFYCYKAEPASIKNLKRGVASLLQVQCRSGKVIENDVSGRCTVEYKAAQGQVTRTKALETCKTAETGFTTYIQVLGVSGESSSVTVFTLEDGFIKSAIAKETHILAVNARRTTAAKIVSRQSLTLVAIEAGPFEAAGKNVASVVKSLDEKLFAVGVAAEKVKSQCKGCQSLFEHWQAVQKQFEPDSLSKAIAPRSFLALIQSIRKAYKDEILQVLKRSSKTALPQVVDAVTSSQTPDSLDAMLQFLNFADPKGMVLQERFLYACGFASHPNERMLQALVDISKGKIGSKDIKESVVIIMGAIVHKLCQKGGCELPTVVEVKKMILEGPDSTQVESDIQMYLLALKNSLLPEAIPLFSKYAESEVGAYCTISLTALQRYDVALITDEVKQTVNRVYHQNRRVYEKNVRAAAADVIFSSNPSYMEVKNVLLSIGNLPKELNKYMLSKVKDILHFEMPASKILRQAMKDMISHNYDRFSKVGSSSAFSGFMARTADATTTYSLDILYSGSGVLRRSNMNIYGASNGALLHGLQVAIEAQGMESLIAAKPDEGEEDLESFAGMSALLFDVQLRPVTFFKGYSDLMSKMFSMSGEPMNVVKGLILLTDHSQVIQLQSGLKANAEFQGGLAIDISGGMEVSLWYRESKTSVNNRGAMVVTGNVTVDMDFVRTGMEVSFETEASLDFITTVQFSEYPFLVCMQMDKTTFPFSESLTKYESLPSGKSYVSRRGHKQLLPGSEFPLHQENSNMCKRVFDSDW
SIO_010081: LOC112231657
subclass of: SO_0000673
so part of: LOC112231657
location: join(355554..355614,357468..357658,359578..359721,361756..361863,362259..362515,363243..363393,363763..363920,364309..364477,367631..367738,368279..368491,371080..371291,381121..381218,381437..381558,384862..385089,385417..385541,416430..416600,416748..416895)
location: region:355554-416895:1
so has part: feature:355554-355614:1:exon
so has part: feature:357468-357658:1:exon
so has part: feature:359578-359721:1:exon
so has part: feature:361756-361863:1:exon
so has part: feature:362259-362515:1:exon
so has part: feature:363243-363393:1:exon
so has part: feature:363763-363920:1:exon
so has part: feature:364309-364477:1:exon
so has part: feature:367631-367738:1:exon
so has part: feature:368279-368491:1:exon
so has part: feature:371080-371291:1:exon
so has part: feature:381121-381218:1:exon
so has part: feature:381437-381558:1:exon
so has part: feature:384862-385089:1:exon
so has part: feature:385417-385541:1:exon
so has part: feature:416430-416600:1:exon
so has part: feature:416748-416895:1:exon

XP_024254122.1
type: Protein
SIO_000068: ncbiprotein

position:355554:1
position: 355554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416895:1
position: 416895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355554-355614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357468-357658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359578-359721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361756-361863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362259-362515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363243-363393:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363763-363920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364309-364477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367631-367738:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368279-368491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371080-371291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381121-381218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381437-381558:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:384862-385089:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:385417-385541:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:416430-416600:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:416748-416895:1:exon

LOC112231658
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(422958..446456)
location: region:422958-446456:-1
so has part: feature:422958-446456:-1:exon
subclass of: SO_0000010

112231658
type: Gene
SIO_000068: ncbigene

position:422958:-1
position: 422958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446456:-1
position: 446456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422958-446456:-1:exon

LOC112231658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231658
product: uncharacterized protein C4orf54
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_024398355.2
SIO_010081: LOC112231658
subclass of: SO_0000673
so part of: LOC112231658
location: complement(join(422958..425287,441548..446456))
location: region:422958-446456:-1
so has part: feature:441548-446456:-1:exon
so has part: feature:422958-425287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441548-446456:-1:exon

position:441548:-1
position: 441548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422958-425287:-1:exon

position:425287:-1
position: 425287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf54
translation: MEAVEKTLTYRDNTGPYRKLLPGNKDKDKCNPKTKSDEYNYVHLNDLIDMKSEVTKTVKVAFTGDGNQLAVFKCNSDKSGERSPRIREIDDNVDKIYEVKSKDKSEDRPVSEDPPMDTSLTEFNSNVDLENDNMTELQSEIVPRDNTVPSECEELQYTDMHLNSKSESDDCESVVLSDHCAPDTVIDESHYITTHEIQLTELDHDVDYDFGRGSCWDIEDDNLVYSFVDYASFESDETTEGTLIGLVDGRSLAKVKSSKAQYNNVHQSVAGCAVVSTESEFCDSDKCPSSDESICKNQNGSGNSAGQIHLSIKTSSTAINDYNNTIENENMCYHTKHVGDRSHFFFTSTDARAEALCDRSQYFIPAPGRQHFATKLRGKDVNEYSSGASSSISELDDADKEVRNLTAKSFRSLACPYFDAIHLSTSSESSMSEYGLGLNKWSAFVDLKYGNMSQGREQNLIAQKSATATFEMSKNAEYKSINGIAISSKKGPQTNMISLNTKISSPQHASSSTQNVEFTGPFEPGSEVITLTKTLDFRCNVEAGSPERGKPPKYSENASGARSMDEVPGTLPAEPEYEVSYQHSDAGDSMEGTHKKASFASSLLKNVISKKMQFEQERKMERGEIRDTHPTHSPCFQCKDQDGVRERDTEKGVHNSQTSESGSGYTSNSSDEQGAVDLRPNSCDPKEELTEALESFQTINEARLDFQKDACEPTRGSLSHSQNSAFKSWRDGEPEPQEKHEIRTILDGTPSTTDYTGERELDSRVVSSKLTKLSHLFVPSSQLLPKENQFKEKVSDSTLVGAQKEQRGYGERKCRPDNNAGIVKGSKAPEIKIRLRSVKENKCNPLNIDKLLTPNINYPIKSAADSKCQVLPASDRVPHFTVRDIRDNKCKFQTPIHQVRDVRKLVKSSYRLVSVDNSESKGAVASAAASLREDNKGSTKESDKKSPPSSIVIKCQSVNTNSSTKQRVLVTEAPKRRQIENDRSSPKPSPECAKNEPMSLHRATGRPPIGFAKQPNTDQSEAKQKQEKMVEAGERKPESKIPKQVALEKLKAAVKTMEQLYVFDRNEWKRKSQAPWPITDSHVLSLIAREEHGGPEELGAAGGRERLSTAINTGRLPETCNIQEEKGCLRIIHVPLTEDTFKTQSHQSKRFSNKSVFHLENSIKTAVSSSSSNSWNGPQTCSPSHATSMVKSISSKTPIGPLSLKISPPKRALVDRGRFKSSPTTETPPQPIKSGNPDSENYLTIPVEGRSVGQMKLPIQEQVFPSSPAASQPGITNTKRHKHNSIQSLKRSPVVIETRAPDTATTATIYHHSRPVVKQGTPQPQVFCFSPSIAPLPTTPSGGDPFQRTQRKMLFDPTTGQYYLVDTPIEPVTQCLFHPEMGQYVDMPMPMPPPQPVTPMSVSPLALNLGGMYAPTYMIYPGFLSPTLAAQTVMAPQVATHMVSQLEEESGETAQGKYTLVQEGNMMGAESPYYSATGESVPASVPVTQGSAVTSEGKPAVISITSQQRPRIIAPPSFDGTTMSFVVEHR
SIO_010081: LOC112231658
subclass of: SO_0000673
so part of: LOC112231658
location: complement(441568..446160)
location: region:441568-446160:-1
so has part: feature:441568-446160:-1:exon

XP_024254123.1
type: Protein
SIO_000068: ncbiprotein

position:441568:-1
position: 441568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446160:-1
position: 446160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441568-446160:-1:exon

LOC112231659
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 494064..505002
location: region:494064-505002:1
so has part: feature:494064-505002:1:exon

112231659
type: Gene
SIO_000068: ncbigene

position:494064:1
position: 494064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505002:1
position: 505002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494064-505002:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 494064..494756
location: region:494064-494756:1
so has part: feature:494064-494756:1:exon

position:494756:1
position: 494756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494064-494756:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 495020..495091
location: region:495020-495091:1
so has part: feature:495020-495091:1:exon

position:495020:1
position: 495020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495091:1
position: 495091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495020-495091:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 495768..495839
location: region:495768-495839:1
so has part: feature:495768-495839:1:exon

position:495768:1
position: 495768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495839:1
position: 495839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495768-495839:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 496150..496221
location: region:496150-496221:1
so has part: feature:496150-496221:1:exon

position:496150:1
position: 496150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496221:1
position: 496221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496150-496221:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 499572..499643
location: region:499572-499643:1
so has part: feature:499572-499643:1:exon

position:499572:1
position: 499572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499643:1
position: 499643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499572-499643:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 500566..500735
location: region:500566-500735:1
so has part: feature:500566-500735:1:exon

position:500566:1
position: 500566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500735:1
position: 500735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500566-500735:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 501525..501690
location: region:501525-501690:1
so has part: feature:501525-501690:1:exon

position:501525:1
position: 501525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501690:1
position: 501690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501525-501690:1:exon

LOC112231659
type: Exon
subclass of: SO_0000147
RO_0002162: 74940
gene: LOC112231659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC112231659
subclass of: SO_0000673
so part of: LOC112231659
location: 503232..505002
location: region:503232-505002:1
so has part: feature:503232-505002:1:exon

position:503232:1
position: 503232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503232-505002:1:exon

LOC112231660
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 505690..529243
location: region:505690-529243:1
so has part: feature:505690-529243:1:exon
subclass of: SO_0000010

112231660
type: Gene
SIO_000068: ncbigene

position:505690:1
position: 505690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529243:1
position: 529243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505690-529243:1:exon

LOC112231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231660
product: coiled-coil domain-containing protein 149, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398356.2
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505690..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528254..529243)
location: region:505690-529243:1
so has part: feature:505690-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-529243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505690-505882:1:exon

position:505882:1
position: 505882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

position:512332:1
position: 512332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512493:1
position: 512493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

position:514706:1
position: 514706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514744:1
position: 514744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

position:517998:1
position: 517998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518105:1
position: 518105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

position:518316:1
position: 518316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518432:1
position: 518432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

position:519111:1
position: 519111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519283:1
position: 519283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

position:519422:1
position: 519422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519494:1
position: 519494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

position:519878:1
position: 519878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519962:1
position: 519962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

position:525429:1
position: 525429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525576:1
position: 525576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

position:525801:1
position: 525801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525877:1
position: 525877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526380-526415:1:exon

position:526380:1
position: 526380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526415:1
position: 526415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:527688-527978:1:exon

position:527688:1
position: 527688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527978:1
position: 527978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:528254-529243:1:exon

position:528254:1
position: 528254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231660
product: coiled-coil domain-containing protein 149, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398360.2
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505690..505882,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528254..529243)
location: region:505690-529243:1
so has part: feature:505690-505882:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-529243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505690-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526380-526415:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528254-529243:1:exon

LOC112231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231660
product: coiled-coil domain-containing protein 149, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398357.2
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505691..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,527688..527978,528254..529243)
location: region:505691-529243:1
so has part: feature:505691-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-529243:1:exon

position:505691:1
position: 505691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505691-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:528254-529243:1:exon

LOC112231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231660
product: coiled-coil domain-containing protein 149, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_024398358.2
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505691..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528249..528403)
location: region:505691-528403:1
so has part: feature:505691-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528249-528403:1:exon

position:528403:1
position: 528403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505691-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526380-526415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:528249-528403:1:exon

position:528249:1
position: 528249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 149 isoform X1
translation: MNSSRRSESDWQGLVSEFLVCKRKLESKKEALLILSKELDTCQQERDQYQLMANQLRERHQGLKKKYRELIDGDPSLPPEKRNQLNLAQLLRDSRERSKQLSEEVKELSQRLAEAQGDNKLLRMTIARQRLGDEEVGARHFQAYEREDLVQQLETAREQNEELEHSVKSLTDELQDVRAERNVFQEKAQRLNHEVNHILGGHECRILDVDALCMENRYLHERFKQLQEEVTMLKMNVMKYKSALESRKNSKTYGKANSSALTGVLSAKQVQELLLSEDNGCSLPVTSQSISDLKSLATALLETIHEKNLVIQHQRQTNKILGNRVGELEKKLKTLEVSGLWSLPGLTYNVSLGFSGRGRDAIILNETLQPSSTVTSSEEKKVPSNDHEVPSNDHEVPPTEHEVLPTEHEVPPTEHEVPPNEQDVTPNEQEVPPTDHKVPPTEQEVPSTVQSTTEDDKVANDMQIPVPVPRHVGGLPSVTGDTEISTKESEPLVSPVSRLDTSKQN
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505832..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528254..528411)
location: region:505832-528411:1
so has part: feature:505832-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-528411:1:exon

XP_024254124.1
type: Protein
SIO_000068: ncbiprotein

position:505832:1
position: 505832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528411:1
position: 528411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505832-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526380-526415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:528254-528411:1:exon

LOC112231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 149 isoform X2
translation: MNSSRRSESDWQGLVSEFLVCKRKLESKKEALLILSKELDTCQQERDQYQLMANQLRERHQGLKKKYRELIDGDPSLPPEKRNQLNLAQLLRDSRERSKQLSEEVKELSQRLAEAQGDNKLLRMTIARQRLGDEEVGARHFQAYEREDLVQQLETAREQNEELEHSVKSLTDELQDVRAERNVFQEKAQRLNHEVNHILGGHECRILDVDALCMENRYLHERFKQLQEEVTMLKMNVMKYKSALESRKNSKTYGKANSSALTGVLSAKQVQELLLSEDNGCSLPVTSQSISDLKSLATALLETIHEKNLVIQHQRQTNKILGNRVGELEKKLKTLEVSGLWSLPGGRDAIILNETLQPSSTVTSSEEKKVPSNDHEVPSNDHEVPPTEHEVLPTEHEVPPTEHEVPPNEQDVTPNEQEVPPTDHKVPPTEQEVPSTVQSTTEDDKVANDMQIPVPVPRHVGGLPSVTGDTEISTKESEPLVSPVSRLDTSKQN
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505832..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,527688..527978,528254..528411)
location: region:505832-528411:1
so has part: feature:505832-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-528411:1:exon

XP_024254125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505832-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:528254-528411:1:exon

LOC112231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 149 isoform X4
translation: MNSSRRSESDWQGLVSELNLAQLLRDSRERSKQLSEEVKELSQRLAEAQGDNKLLRMTIARQRLGDEEVGARHFQAYEREDLVQQLETAREQNEELEHSVKSLTDELQDVRAERNVFQEKAQRLNHEVNHILGGHECRILDVDALCMENRYLHERFKQLQEEVTMLKMNVMKYKSALESRKNSKTYGKANSSALTGVLSAKQVQELLLSEDNGCSLPVTSQSISDLKSLATALLETIHEKNLVIQHQRQTNKILGNRVGELEKKLKTLEVSGLWSLPGLTYNVSLGFSGRGRDAIILNETLQPSSTVTSSEEKKVPSNDHEVPSNDHEVPPTEHEVLPTEHEVPPTEHEVPPNEQDVTPNEQEVPPTDHKVPPTEQEVPSTVQSTTEDDKVANDMQIPVPVPRHVGGLPSVTGDTEISTKESEPLVSPVSRLDTSKQN
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505832..505882,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528254..528411)
location: region:505832-528411:1
so has part: feature:505832-505882:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528254-528411:1:exon

XP_024254128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505832-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526380-526415:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528254-528411:1:exon

LOC112231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 149 isoform X3
translation: MNSSRRSESDWQGLVSEFLVCKRKLESKKEALLILSKELDTCQQERDQYQLMANQLRERHQGLKKKYRELIDGDPSLPPEKRNQLNLAQLLRDSRERSKQLSEEVKELSQRLAEAQGDNKLLRMTIARQRLGDEEVGARHFQAYEREDLVQQLETAREQNEELEHSVKSLTDELQDVRAERNVFQEKAQRLNHEVNHILGGHECRILDVDALCMENRYLHERFKQLQEEVTMLKMNVMKYKSALESRKNSKTYGKANSSALTGVLSAKQVQELLLSEDNGCSLPVTSQSISDLKSLATALLETIHEKNLVIQHQRQTNKILGNRVGELEKKLKTLEVSGLWSLPGLTYNVSLGFSGRGRDAIILNETLQPSSTVTSSEEKKVPSNDHEVPSNDHEVPPTEHEVLPTEHEVPPTEHEVPPNEQDVTPNEQEVPPTDHKVPPTEQEVPSTVQSTTEQRMTR
SIO_010081: LOC112231660
subclass of: SO_0000673
so part of: LOC112231660
location: join(505832..505882,512332..512493,514706..514744,517998..518105,518316..518432,519111..519283,519422..519494,519878..519962,525429..525576,525801..525877,526380..526415,527688..527978,528249..528268)
location: region:505832-528268:1
so has part: feature:505832-505882:1:exon
so has part: feature:512332-512493:1:exon
so has part: feature:514706-514744:1:exon
so has part: feature:517998-518105:1:exon
so has part: feature:518316-518432:1:exon
so has part: feature:519111-519283:1:exon
so has part: feature:519422-519494:1:exon
so has part: feature:519878-519962:1:exon
so has part: feature:525429-525576:1:exon
so has part: feature:525801-525877:1:exon
so has part: feature:526380-526415:1:exon
so has part: feature:527688-527978:1:exon
so has part: feature:528249-528268:1:exon

XP_024254126.1
type: Protein
SIO_000068: ncbiprotein

position:528268:1
position: 528268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505832-505882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512332-512493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514706-514744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517998-518105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518316-518432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519111-519283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519422-519494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519878-519962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525429-525576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525801-525877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526380-526415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527688-527978:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:528249-528268:1:exon

LOC112231662
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(535212..538888)
location: region:535212-538888:-1
so has part: feature:535212-538888:-1:exon
subclass of: SO_0000010

112231662
type: Gene
SIO_000068: ncbigene

position:535212:-1
position: 535212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538888:-1
position: 538888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535212-538888:-1:exon

LOC112231662
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231662
product: extracellular superoxide dismutase [Cu-Zn]
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398361.2
SIO_010081: LOC112231662
subclass of: SO_0000673
so part of: LOC112231662
location: complement(join(535212..536094,538481..538888))
location: region:535212-538888:-1
so has part: feature:538481-538888:-1:exon
so has part: feature:535212-536094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538481-538888:-1:exon

position:538481:-1
position: 538481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535212-536094:-1:exon

position:536094:-1
position: 536094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231662
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular superoxide dismutase [Cu-Zn]
translation: MPLFHPIFLFVLVSFQACSSTHSQEAASNMAPPEAMEYNRTVYAACKMRPSTKLGEGLPNVYGQVLFKQEYPEGSLKVLFLLHGFPSDSDHQSKAIHIHQYGDFSQGCDSTGGHYNPYRVPHPSHPGDFGNFVAHQGRVHKLTESKATLFGGLSVLGRAVVVHEKADDLGQGGDAGSLLHGNAGRRLACCTIGMSSPKLWDKHHHRQQRRRG
SIO_010081: LOC112231662
subclass of: SO_0000673
so part of: LOC112231662
location: complement(535434..536072)
location: region:535434-536072:-1
so has part: feature:535434-536072:-1:exon

XP_024254129.1
type: Protein
SIO_000068: ncbiprotein

position:535434:-1
position: 535434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536072:-1
position: 536072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535434-536072:-1:exon

LOC112231663
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549540..562321
location: region:549540-562321:1
so has part: feature:549540-562321:1:exon
subclass of: SO_0000010

112231663
type: Gene
SIO_000068: ncbigene

position:549540:1
position: 549540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562321:1
position: 562321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549540-562321:1:exon

LOC112231663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231663
product: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398362.2
SIO_010081: LOC112231663
subclass of: SO_0000673
so part of: LOC112231663
location: join(549540..549730,550871..551219,551918..552111,552713..552872,553894..554112,554291..554458,554737..554823,557554..557703,558002..558110,558359..558550,560235..560357,561144..561334,561460..561629,561824..562321)
location: region:549540-562321:1
so has part: feature:549540-549730:1:exon
so has part: feature:550871-551219:1:exon
so has part: feature:551918-552111:1:exon
so has part: feature:552713-552872:1:exon
so has part: feature:553894-554112:1:exon
so has part: feature:554291-554458:1:exon
so has part: feature:554737-554823:1:exon
so has part: feature:557554-557703:1:exon
so has part: feature:558002-558110:1:exon
so has part: feature:558359-558550:1:exon
so has part: feature:560235-560357:1:exon
so has part: feature:561144-561334:1:exon
so has part: feature:561460-561629:1:exon
so has part: feature:561824-562321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549540-549730:1:exon

position:549730:1
position: 549730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550871-551219:1:exon

position:550871:1
position: 550871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551219:1
position: 551219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551918-552111:1:exon

position:551918:1
position: 551918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552111:1
position: 552111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552713-552872:1:exon

position:552713:1
position: 552713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552872:1
position: 552872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553894-554112:1:exon

position:553894:1
position: 553894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554112:1
position: 554112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554291-554458:1:exon

position:554291:1
position: 554291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554458:1
position: 554458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:554737-554823:1:exon

position:554737:1
position: 554737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554823:1
position: 554823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557554-557703:1:exon

position:557554:1
position: 557554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557703:1
position: 557703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558002-558110:1:exon

position:558002:1
position: 558002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558110:1
position: 558110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558359-558550:1:exon

position:558359:1
position: 558359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558550:1
position: 558550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:560235-560357:1:exon

position:560235:1
position: 560235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560357:1
position: 560357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:561144-561334:1:exon

position:561144:1
position: 561144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561334:1
position: 561334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:561460-561629:1:exon

position:561460:1
position: 561460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561629:1
position: 561629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:561824-562321:1:exon

position:561824:1
position: 561824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
translation: MSKRHRLDLGDDYSNKKRSDGKDRDRDRDRDERSKDRERDRDRDRDRDRDRDRDVKPSVVPPNTMMAVGGMLPLKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILARHQSFVLVGETGSGKTTQIPQWCVDMVKGLGGPKKAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEEEGDCLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKVIPLYSTLPPQQQQRIFEAAPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKTFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESTQWCYDNFVNYRSLMSADNVRSQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCSDIKPEWLVKVAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
SIO_010081: LOC112231663
subclass of: SO_0000673
so part of: LOC112231663
location: join(549669..549730,550871..551219,551918..552111,552713..552872,553894..554112,554291..554458,554737..554823,557554..557703,558002..558110,558359..558550,560235..560357,561144..561334,561460..561629,561824..561941)
location: region:549669-561941:1
so has part: feature:549669-549730:1:exon
so has part: feature:550871-551219:1:exon
so has part: feature:551918-552111:1:exon
so has part: feature:552713-552872:1:exon
so has part: feature:553894-554112:1:exon
so has part: feature:554291-554458:1:exon
so has part: feature:554737-554823:1:exon
so has part: feature:557554-557703:1:exon
so has part: feature:558002-558110:1:exon
so has part: feature:558359-558550:1:exon
so has part: feature:560235-560357:1:exon
so has part: feature:561144-561334:1:exon
so has part: feature:561460-561629:1:exon
so has part: feature:561824-561941:1:exon

XP_024254130.1
type: Protein
SIO_000068: ncbiprotein

position:549669:1
position: 549669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561941:1
position: 561941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549669-549730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550871-551219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551918-552111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552713-552872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553894-554112:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554291-554458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554737-554823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557554-557703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558002-558110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558359-558550:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560235-560357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:561144-561334:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561460-561629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561824-561941:1:exon

LOC112231664
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598974..640865
location: region:598974-640865:1
so has part: feature:598974-640865:1:exon
subclass of: SO_0000010

112231664
type: Gene
SIO_000068: ncbigene

position:598974:1
position: 598974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640865:1
position: 640865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598974-640865:1:exon

LOC112231664
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231664
product: storkhead-box protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398364.2
SIO_010081: LOC112231664
subclass of: SO_0000673
so part of: LOC112231664
location: join(598974..600508,620200..620352,628467..629899,629999..630975,639080..640865)
location: region:598974-640865:1
so has part: feature:598974-600508:1:exon
so has part: feature:620200-620352:1:exon
so has part: feature:628467-629899:1:exon
so has part: feature:629999-630975:1:exon
so has part: feature:639080-640865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598974-600508:1:exon

position:600508:1
position: 600508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:620200-620352:1:exon

position:620200:1
position: 620200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620352:1
position: 620352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628467-629899:1:exon

position:628467:1
position: 628467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629899:1
position: 629899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629999-630975:1:exon

position:629999:1
position: 629999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630975:1
position: 630975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:639080-640865:1:exon

position:639080:1
position: 639080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231664
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: storkhead-box protein 2
translation: MKKTRSTNLRRAWPSSDLSERLPERTRSRSEKDFRLQQKHHHTPPPPPHISPGPPRGYQMPGDVSPISMSPISQSQFIPLGEILCLAISAMNSARKPVNQEALMEHLATCFPGVPTPSSEILRHTLNMLVRERKIYPTPEGYFIVTPQTYFITPNLIRSNSKWYHLDDWQQQQQCTSPQSGTITPSTPGCVRERPNQKNHGDSYNTYRDDTPIPQAPTYQRKSPKEPRGDPPSYPQPPPTPIQIPTSQLQDPLTDKSKSNAPFPYKTDTLTKKKEGGGGSSAEKQSKKFGLKLFRLSFKKDKLRQLATFSAQFPPEEWPLRDEDAPAITIPRTVEMEIIRRINPDLTVENVARHTAVMKRLEEERAQRRKAGSSAEHSARSRRSRGHRRVPHGKSRSHSKTRASRGDPSDSSNLDMAMVDRDYSRFFSHSLVRSPREAMYTLERKRSGGTYVVHSNPNITESHFPITPEWDVSGELAKRRTEMPFPEPSRGTSSGRVHRSHSHTQEGRKSRDELTDQAKERSRSMDNALSPLDGMGPSSLGMSEDYERSPDERSRYYTDDGTLRASQKSPHYSRIMFSAAKFNSEMCVPDGSLGKGSLDESRIRSPLERNKSRDSLPAYSDLKGLSPKSSADDYFQCNTSNETILTAPSPLSKADHDTLTSSEGIRKGTPADRHTPHLTSPLTMEYKEDSLAKGQNGSNRSTPSQTPEPMTNGRLTQHQHNVDPGGGGGGGVADKRKEIFSKDTLFKPPHNTLTAGYVEGTYTKSGTLRKTPHIKSAEVLDNLEAQQPSNSAASPASALVPQGSEPVVPSASEAAFDYYNVSDDDEEVMAEDTARKELVVAEGKGHGEGGGGVGTMQWLLEREKEHDLQRKFETNLTLLSPKETENSSSQKSAHSARLDSMDSSSVTVDSGFNSPRTRESLASNTSSIMESNRRQNPALSPGHMGTTSNGPPFSFRAIPEPPRTAQPEKLQKSSTCLASITSV
SIO_010081: LOC112231664
subclass of: SO_0000673
so part of: LOC112231664
location: join(600325..600508,620200..620352,628467..629899,629999..630975,639080..639284)
location: region:600325-639284:1
so has part: feature:600325-600508:1:exon
so has part: feature:620200-620352:1:exon
so has part: feature:628467-629899:1:exon
so has part: feature:629999-630975:1:exon
so has part: feature:639080-639284:1:exon

XP_024254132.1
type: Protein
SIO_000068: ncbiprotein

position:600325:1
position: 600325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639284:1
position: 639284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600325-600508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620200-620352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628467-629899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629999-630975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639080-639284:1:exon

casp3a
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: casp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656139..662599)
location: region:656139-662599:-1
so has part: feature:656139-662599:-1:exon
subclass of: SO_0000010

112231666
type: Gene
SIO_000068: ncbigene

position:656139:-1
position: 656139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662599:-1
position: 662599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656139-662599:-1:exon

casp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: casp3a
product: caspase 3, apoptosis-related cysteine peptidase a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398368.2
SIO_010081: casp3a
subclass of: SO_0000673
so part of: casp3a
location: complement(join(656139..657607,657859..657973,658934..659109,659930..660058,661369..661508,662336..662599))
location: region:656139-662599:-1
so has part: feature:662336-662599:-1:exon
so has part: feature:661369-661508:-1:exon
so has part: feature:659930-660058:-1:exon
so has part: feature:658934-659109:-1:exon
so has part: feature:657859-657973:-1:exon
so has part: feature:656139-657607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662336-662599:-1:exon

position:662336:-1
position: 662336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661369-661508:-1:exon

position:661369:-1
position: 661369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661508:-1
position: 661508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659930-660058:-1:exon

position:659930:-1
position: 659930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660058:-1
position: 660058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658934-659109:-1:exon

position:658934:-1
position: 658934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659109:-1
position: 659109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657859-657973:-1:exon

position:657859:-1
position: 657859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657973:-1
position: 657973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:656139-657607:-1:exon

position:657607:-1
position: 657607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

casp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: casp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-3a
translation: MSAANDLSAGDCVDARRGDGQESEGPCGGSGSMQVDAKPQSHSFRYSLSYPSIGQCIIINNKNFDRRTGMNVRNGTDVDAGNVMKVFGKLGYKVKVYNDQKVDQIKHVLTTASKEDHSCSASFVCVLLSHGDCGVFFGTDASIELKSLTSLFRGDRCNSLVGKPKLFFIQACRGTDLDGGIEADSSSDGSSTKIPVEADFLYAYSTAPGYYSWRNTQTGSWFIQSLCEMIGKYSKELEVQHILTRVNHKVATEFESASNSPGFDAKKQIPCIVSMLTKEMYFTS
SIO_010081: casp3a
subclass of: SO_0000673
so part of: casp3a
location: complement(join(657378..657607,657859..657973,658934..659109,659930..660058,661369..661508,662336..662400))
location: region:657378-662400:-1
so has part: feature:662336-662400:-1:exon
so has part: feature:661369-661508:-1:exon
so has part: feature:659930-660058:-1:exon
so has part: feature:658934-659109:-1:exon
so has part: feature:657859-657973:-1:exon
so has part: feature:657378-657607:-1:exon

XP_024254136.1
type: Protein
SIO_000068: ncbiprotein

position:657378:-1
position: 657378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662400:-1
position: 662400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662336-662400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661369-661508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:659930-660058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658934-659109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657859-657973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657378-657607:-1:exon

primpol
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: primpol
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662705..689947
location: region:662705-689947:1
so has part: feature:662705-689947:1:exon
subclass of: SO_0000010

112231665
type: Gene
SIO_000068: ncbigene

position:662705:1
position: 662705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689947:1
position: 689947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662705-689947:1:exon

primpol
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: primpol
product: primase and polymerase (DNA-directed), transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398367.2
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(662705..662894,663431..663648,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..689947)
location: region:662705-689947:1
so has part: feature:662705-662894:1:exon
so has part: feature:663431-663648:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-689947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662705-662894:1:exon

position:662894:1
position: 662894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663431-663648:1:exon

position:663431:1
position: 663431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663648:1
position: 663648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666706-666853:1:exon

position:666706:1
position: 666706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666853:1
position: 666853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669074-669176:1:exon

position:669074:1
position: 669074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669176:1
position: 669176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:669928-670037:1:exon

position:669928:1
position: 669928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670037:1
position: 670037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:670304-670466:1:exon

position:670304:1
position: 670304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670466:1
position: 670466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:671924-672027:1:exon

position:671924:1
position: 671924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672027:1
position: 672027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:678456-678542:1:exon

position:678456:1
position: 678456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678542:1
position: 678542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:681643-681751:1:exon

position:681643:1
position: 681643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681751:1
position: 681751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:686343-686419:1:exon

position:686343:1
position: 686343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686419:1
position: 686419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:686634-686680:1:exon

position:686634:1
position: 686634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686680:1
position: 686680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686896-689947:1:exon

position:686896:1
position: 686896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

primpol
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: primpol
product: primase and polymerase (DNA-directed), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398365.2
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(662707..662894,663431..663648,664063..664157,664310..664448,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..689947)
location: region:662707-689947:1
so has part: feature:662707-662894:1:exon
so has part: feature:663431-663648:1:exon
so has part: feature:664063-664157:1:exon
so has part: feature:664310-664448:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-689947:1:exon

position:662707:1
position: 662707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662707-662894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663431-663648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664063-664157:1:exon

position:664063:1
position: 664063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664157:1
position: 664157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664310-664448:1:exon

position:664310:1
position: 664310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664448:1
position: 664448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666706-666853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669074-669176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669928-670037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670304-670466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671924-672027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678456-678542:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681643-681751:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686343-686419:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686634-686680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:686896-689947:1:exon

primpol
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: primpol
product: primase and polymerase (DNA-directed), transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398366.2
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(662882..662984,663431..663648,664063..664157,664310..664448,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..689947)
location: region:662882-689947:1
so has part: feature:662882-662984:1:exon
so has part: feature:663431-663648:1:exon
so has part: feature:664063-664157:1:exon
so has part: feature:664310-664448:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-689947:1:exon

position:662882:1
position: 662882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662882-662984:1:exon

position:662984:1
position: 662984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663431-663648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664063-664157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664310-664448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666706-666853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669074-669176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669928-670037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670304-670466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671924-672027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678456-678542:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681643-681751:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686343-686419:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686634-686680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:686896-689947:1:exon

primpol
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: primpol
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed primase/polymerase protein isoform X1
translation: MNKGDWENRLKKVEELAQSFQQCPLTSCYKPRLSRPWQPSSIWKLFPRQCMAINFAQSCREDVHVFALEKEQAKMGQRIFLVTSYSELWHYYSTYRQSLMHCYEVIPEGAVCKLYFDLEFHRPSNKGFDGKCMVASLIQYVCEKLEEVYGIECSGKDVLNLDSSTEEKFSRHLIFILPNAAFKDNLHVGQFIHLILQPVLSVNRRGSELENDMGGVTEDSGKSGLIGSQQAKRPRQEERDLSFLLVKNKDGQDGLFVDLGVYTKNRNFRLYKSSKVGKNVAFTVAEDNKFITKPKRNVSAEESLFQSSLISNVSFTGQMILTWDLHDERDGICPKPHAQQGSTSHCVSDSLGGYQSSPHKEVDNFVLSVVKKDGIQGSIRRWNYFVSEQLLVYDILKYRWCQNVHRCHKSNNIMILVDLKQEVWYQKCHDPACKSFRSSSYPLPQDICISYLITMDEEDQAYLMDDVGNIELSQTLPVEKYLGGSAATLPQGEDRDPWGDDQAYLEALEDVERSTGDLAEDDVPDELLLQTMTEFESLKDLCLSATKC
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(663466..663648,664063..664157,664310..664448,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..687177)
location: region:663466-687177:1
so has part: feature:663466-663648:1:exon
so has part: feature:664063-664157:1:exon
so has part: feature:664310-664448:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-687177:1:exon

XP_024254133.1
type: Protein
SIO_000068: ncbiprotein

position:663466:1
position: 663466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687177:1
position: 687177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663466-663648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664063-664157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664310-664448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666706-666853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669074-669176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669928-670037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670304-670466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671924-672027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678456-678542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:681643-681751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686343-686419:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686634-686680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686896-687177:1:exon

primpol
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: primpol
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed primase/polymerase protein isoform X1
translation: MNKGDWENRLKKVEELAQSFQQCPLTSCYKPRLSRPWQPSSIWKLFPRQCMAINFAQSCREDVHVFALEKEQAKMGQRIFLVTSYSELWHYYSTYRQSLMHCYEVIPEGAVCKLYFDLEFHRPSNKGFDGKCMVASLIQYVCEKLEEVYGIECSGKDVLNLDSSTEEKFSRHLIFILPNAAFKDNLHVGQFIHLILQPVLSVNRRGSELENDMGGVTEDSGKSGLIGSQQAKRPRQEERDLSFLLVKNKDGQDGLFVDLGVYTKNRNFRLYKSSKVGKNVAFTVAEDNKFITKPKRNVSAEESLFQSSLISNVSFTGQMILTWDLHDERDGICPKPHAQQGSTSHCVSDSLGGYQSSPHKEVDNFVLSVVKKDGIQGSIRRWNYFVSEQLLVYDILKYRWCQNVHRCHKSNNIMILVDLKQEVWYQKCHDPACKSFRSSSYPLPQDICISYLITMDEEDQAYLMDDVGNIELSQTLPVEKYLGGSAATLPQGEDRDPWGDDQAYLEALEDVERSTGDLAEDDVPDELLLQTMTEFESLKDLCLSATKC
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(663466..663648,664063..664157,664310..664448,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..687177)
location: region:663466-687177:1
so has part: feature:663466-663648:1:exon
so has part: feature:664063-664157:1:exon
so has part: feature:664310-664448:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-687177:1:exon

XP_024254134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663466-663648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664063-664157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664310-664448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666706-666853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669074-669176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669928-670037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670304-670466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671924-672027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678456-678542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:681643-681751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686343-686419:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686634-686680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686896-687177:1:exon

primpol
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: primpol
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed primase/polymerase protein isoform X2
translation: MNKGDWENRLKKVEELAQSFQQCPLTSCYKPRLSRPWQPSSIWKLFPRQCMAINFAQSCREYVCEKLEEVYGIECSGKDVLNLDSSTEEKFSRHLIFILPNAAFKDNLHVGQFIHLILQPVLSVNRRGSELENDMGGVTEDSGKSGLIGSQQAKRPRQEERDLSFLLVKNKDGQDGLFVDLGVYTKNRNFRLYKSSKVGKNVAFTVAEDNKFITKPKRNVSAEESLFQSSLISNVSFTGQMILTWDLHDERDGICPKPHAQQGSTSHCVSDSLGGYQSSPHKEVDNFVLSVVKKDGIQGSIRRWNYFVSEQLLVYDILKYRWCQNVHRCHKSNNIMILVDLKQEVWYQKCHDPACKSFRSSSYPLPQDICISYLITMDEEDQAYLMDDVGNIELSQTLPVEKYLGGSAATLPQGEDRDPWGDDQAYLEALEDVERSTGDLAEDDVPDELLLQTMTEFESLKDLCLSATKC
SIO_010081: primpol
subclass of: SO_0000673
so part of: primpol
location: join(663466..663648,666706..666853,669074..669176,669928..670037,670304..670466,671924..672027,678456..678542,681643..681751,686343..686419,686634..686680,686896..687177)
location: region:663466-687177:1
so has part: feature:663466-663648:1:exon
so has part: feature:666706-666853:1:exon
so has part: feature:669074-669176:1:exon
so has part: feature:669928-670037:1:exon
so has part: feature:670304-670466:1:exon
so has part: feature:671924-672027:1:exon
so has part: feature:678456-678542:1:exon
so has part: feature:681643-681751:1:exon
so has part: feature:686343-686419:1:exon
so has part: feature:686634-686680:1:exon
so has part: feature:686896-687177:1:exon

XP_024254135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663466-663648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666706-666853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669074-669176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669928-670037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670304-670466:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671924-672027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678456-678542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:681643-681751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686343-686419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686634-686680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686896-687177:1:exon

acsl1a
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: acsl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690040..740643)
location: region:690040-740643:-1
so has part: feature:690040-740643:-1:exon
subclass of: SO_0000010

112231667
type: Gene
SIO_000068: ncbigene

position:690040:-1
position: 690040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740643:-1
position: 740643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690040-740643:-1:exon

acsl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: acsl1a
product: acyl-CoA synthetase long chain family member 1a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398369.2
SIO_010081: acsl1a
subclass of: SO_0000673
so part of: acsl1a
location: complement(join(690040..692065,692280..692351,693473..693574,693825..693968,695006..695122,697066..697154,697415..697487,698036..698131,703551..703685,704248..704382,704881..704958,705565..705638,707188..707239,707438..707470,707718..707893,708479..708578,709277..709378,709695..709759,710643..710757,719856..720057,740545..740643))
location: region:690040-740643:-1
so has part: feature:740545-740643:-1:exon
so has part: feature:719856-720057:-1:exon
so has part: feature:710643-710757:-1:exon
so has part: feature:709695-709759:-1:exon
so has part: feature:709277-709378:-1:exon
so has part: feature:708479-708578:-1:exon
so has part: feature:707718-707893:-1:exon
so has part: feature:707438-707470:-1:exon
so has part: feature:707188-707239:-1:exon
so has part: feature:705565-705638:-1:exon
so has part: feature:704881-704958:-1:exon
so has part: feature:704248-704382:-1:exon
so has part: feature:703551-703685:-1:exon
so has part: feature:698036-698131:-1:exon
so has part: feature:697415-697487:-1:exon
so has part: feature:697066-697154:-1:exon
so has part: feature:695006-695122:-1:exon
so has part: feature:693825-693968:-1:exon
so has part: feature:693473-693574:-1:exon
so has part: feature:692280-692351:-1:exon
so has part: feature:690040-692065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740545-740643:-1:exon

position:740545:-1
position: 740545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719856-720057:-1:exon

position:719856:-1
position: 719856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720057:-1
position: 720057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710643-710757:-1:exon

position:710643:-1
position: 710643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710757:-1
position: 710757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709695-709759:-1:exon

position:709695:-1
position: 709695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709759:-1
position: 709759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:709277-709378:-1:exon

position:709277:-1
position: 709277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709378:-1
position: 709378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:708479-708578:-1:exon

position:708479:-1
position: 708479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708578:-1
position: 708578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:707718-707893:-1:exon

position:707718:-1
position: 707718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707893:-1
position: 707893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707438-707470:-1:exon

position:707438:-1
position: 707438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707470:-1
position: 707470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:707188-707239:-1:exon

position:707188:-1
position: 707188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707239:-1
position: 707239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:705565-705638:-1:exon

position:705565:-1
position: 705565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705638:-1
position: 705638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:704881-704958:-1:exon

position:704881:-1
position: 704881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704958:-1
position: 704958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:704248-704382:-1:exon

position:704248:-1
position: 704248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704382:-1
position: 704382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:703551-703685:-1:exon

position:703551:-1
position: 703551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703685:-1
position: 703685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:698036-698131:-1:exon

position:698036:-1
position: 698036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698131:-1
position: 698131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:697415-697487:-1:exon

position:697415:-1
position: 697415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697487:-1
position: 697487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:697066-697154:-1:exon

position:697066:-1
position: 697066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697154:-1
position: 697154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:695006-695122:-1:exon

position:695006:-1
position: 695006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695122:-1
position: 695122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:693825-693968:-1:exon

position:693825:-1
position: 693825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693968:-1
position: 693968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:693473-693574:-1:exon

position:693473:-1
position: 693473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693574:-1
position: 693574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:692280-692351:-1:exon

position:692280:-1
position: 692280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692351:-1
position: 692351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:690040-692065:-1:exon

position:692065:-1
position: 692065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

acsl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: acsl1a
product: acyl-CoA synthetase long chain family member 1a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398370.2
SIO_010081: acsl1a
subclass of: SO_0000673
so part of: acsl1a
location: complement(join(690040..692065,692280..692351,693473..693574,693825..693968,695006..695122,697066..697154,697415..697487,698036..698131,703551..703685,704248..704382,704999..705076,705565..705638,707188..707239,707438..707470,707718..707893,708479..708578,709277..709378,709695..709759,710643..710757,719856..720057,740545..740643))
location: region:690040-740643:-1
so has part: feature:740545-740643:-1:exon
so has part: feature:719856-720057:-1:exon
so has part: feature:710643-710757:-1:exon
so has part: feature:709695-709759:-1:exon
so has part: feature:709277-709378:-1:exon
so has part: feature:708479-708578:-1:exon
so has part: feature:707718-707893:-1:exon
so has part: feature:707438-707470:-1:exon
so has part: feature:707188-707239:-1:exon
so has part: feature:705565-705638:-1:exon
so has part: feature:704999-705076:-1:exon
so has part: feature:704248-704382:-1:exon
so has part: feature:703551-703685:-1:exon
so has part: feature:698036-698131:-1:exon
so has part: feature:697415-697487:-1:exon
so has part: feature:697066-697154:-1:exon
so has part: feature:695006-695122:-1:exon
so has part: feature:693825-693968:-1:exon
so has part: feature:693473-693574:-1:exon
so has part: feature:692280-692351:-1:exon
so has part: feature:690040-692065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740545-740643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719856-720057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710643-710757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709695-709759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709277-709378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708479-708578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707718-707893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707438-707470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707188-707239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705565-705638:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:704999-705076:-1:exon

position:704999:-1
position: 704999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705076:-1
position: 705076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:704248-704382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:703551-703685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:698036-698131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:697415-697487:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:697066-697154:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:695006-695122:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:693825-693968:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:693473-693574:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692280-692351:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:690040-692065:-1:exon

acsl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: acsl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 1a isoform X1
translation: MQAQELLRRLRIPEFEDVRQYMHSLPTNMLMGVGALAALTTYWYATRPKALKPPCDLNMQSVAMAGDGYVRRSILNNDDEHMTHYYSDARTMYEVFLRGLRVSNDGPCLGSRKPNQPYEWLSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLYDTLGLEAIEYIINQAAISTVICDLAAKARLILDCVSGKEHTLKTIVLMEAFDEELMARGQQSSIEILSLKDVEAVGKAHHHQPLPPTPEDLALICFTSGTTGNPKGGMLTHGNVIANCAAFIKITEVHCMLNLHDIHMSYLPLAHMFERVVEGVILVHGARIGYFQGDIRLLMDDLKTLQPTVFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGIVRKDSLWDKLIFQKVQNSLGGRVRLMITGAAPVSPTVLTFIRAALGCQFYEGYGQTECTAGCTMSMPGDWTAGHVGAPLPCNYVKLVDVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTGDIGKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVGIVVPDPDFLPGWAKKKGIEGSYLEMCASKEMKNAILEDILRLGKEGGLKSFEQVRDISLHTEMFSVQNGLLTPTLKAKRTDLRSHFREQIDLLYAKIKM
SIO_010081: acsl1a
subclass of: SO_0000673
so part of: acsl1a
location: complement(join(691925..692065,692280..692351,693473..693574,693825..693968,695006..695122,697066..697154,697415..697487,698036..698131,703551..703685,704248..704382,704881..704958,705565..705638,707188..707239,707438..707470,707718..707893,708479..708578,709277..709378,709695..709759,710643..710757,719856..720050))
location: region:691925-720050:-1
so has part: feature:719856-720050:-1:exon
so has part: feature:710643-710757:-1:exon
so has part: feature:709695-709759:-1:exon
so has part: feature:709277-709378:-1:exon
so has part: feature:708479-708578:-1:exon
so has part: feature:707718-707893:-1:exon
so has part: feature:707438-707470:-1:exon
so has part: feature:707188-707239:-1:exon
so has part: feature:705565-705638:-1:exon
so has part: feature:704881-704958:-1:exon
so has part: feature:704248-704382:-1:exon
so has part: feature:703551-703685:-1:exon
so has part: feature:698036-698131:-1:exon
so has part: feature:697415-697487:-1:exon
so has part: feature:697066-697154:-1:exon
so has part: feature:695006-695122:-1:exon
so has part: feature:693825-693968:-1:exon
so has part: feature:693473-693574:-1:exon
so has part: feature:692280-692351:-1:exon
so has part: feature:691925-692065:-1:exon

XP_024254137.1
type: Protein
SIO_000068: ncbiprotein

position:691925:-1
position: 691925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720050:-1
position: 720050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719856-720050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710643-710757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709695-709759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709277-709378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708479-708578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707718-707893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707438-707470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707188-707239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:705565-705638:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704881-704958:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:704248-704382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:703551-703685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698036-698131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:697415-697487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:697066-697154:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:695006-695122:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:693825-693968:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:693473-693574:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:692280-692351:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691925-692065:-1:exon

acsl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: acsl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 1a isoform X2
translation: MQAQELLRRLRIPEFEDVRQYMHSLPTNMLMGVGALAALTTYWYATRPKALKPPCDLNMQSVAMAGDGYVRRSILNNDDEHMTHYYSDARTMYEVFLRGLRVSNDGPCLGSRKPNQPYEWLSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLYDTLGLEAIEYIINQAAISTVICDLAAKARLILDCVSGKEHTLKTIVLMEAFDEELMARGQQSSIEILSLKDVEAVGKAHHHQPLPPTPEDLALICFTSGTTGNPKGGMLTHGNVIANCAAFIKITESILKPSTKDVLISFLPLAHMFERVFEGVILVHGARIGYFQGDIRLLMDDLKTLQPTVFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGIVRKDSLWDKLIFQKVQNSLGGRVRLMITGAAPVSPTVLTFIRAALGCQFYEGYGQTECTAGCTMSMPGDWTAGHVGAPLPCNYVKLVDVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTGDIGKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVGIVVPDPDFLPGWAKKKGIEGSYLEMCASKEMKNAILEDILRLGKEGGLKSFEQVRDISLHTEMFSVQNGLLTPTLKAKRTDLRSHFREQIDLLYAKIKM
SIO_010081: acsl1a
subclass of: SO_0000673
so part of: acsl1a
location: complement(join(691925..692065,692280..692351,693473..693574,693825..693968,695006..695122,697066..697154,697415..697487,698036..698131,703551..703685,704248..704382,704999..705076,705565..705638,707188..707239,707438..707470,707718..707893,708479..708578,709277..709378,709695..709759,710643..710757,719856..720050))
location: region:691925-720050:-1
so has part: feature:719856-720050:-1:exon
so has part: feature:710643-710757:-1:exon
so has part: feature:709695-709759:-1:exon
so has part: feature:709277-709378:-1:exon
so has part: feature:708479-708578:-1:exon
so has part: feature:707718-707893:-1:exon
so has part: feature:707438-707470:-1:exon
so has part: feature:707188-707239:-1:exon
so has part: feature:705565-705638:-1:exon
so has part: feature:704999-705076:-1:exon
so has part: feature:704248-704382:-1:exon
so has part: feature:703551-703685:-1:exon
so has part: feature:698036-698131:-1:exon
so has part: feature:697415-697487:-1:exon
so has part: feature:697066-697154:-1:exon
so has part: feature:695006-695122:-1:exon
so has part: feature:693825-693968:-1:exon
so has part: feature:693473-693574:-1:exon
so has part: feature:692280-692351:-1:exon
so has part: feature:691925-692065:-1:exon

XP_024254138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:719856-720050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710643-710757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709695-709759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709277-709378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708479-708578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707718-707893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707438-707470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707188-707239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:705565-705638:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704999-705076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:704248-704382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:703551-703685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698036-698131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:697415-697487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:697066-697154:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:695006-695122:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:693825-693968:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:693473-693574:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:692280-692351:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691925-692065:-1:exon

helt
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: helt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 753646..755638
location: region:753646-755638:1
so has part: feature:753646-755638:1:exon
subclass of: SO_0000010

112231546
type: Gene
SIO_000068: ncbigene

position:753646:1
position: 753646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755638:1
position: 755638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753646-755638:1:exon

helt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: helt
product: helt bHLH transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_024398249.2
SIO_010081: helt
subclass of: SO_0000673
so part of: helt
location: join(753646..753861,754464..754568,754800..754896,755142..755638)
location: region:753646-755638:1
so has part: feature:753646-753861:1:exon
so has part: feature:754464-754568:1:exon
so has part: feature:754800-754896:1:exon
so has part: feature:755142-755638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753646-753861:1:exon

position:753861:1
position: 753861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754464-754568:1:exon

position:754464:1
position: 754464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754568:1
position: 754568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754800-754896:1:exon

position:754800:1
position: 754800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754896:1
position: 754896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755142-755638:1:exon

position:755142:1
position: 755142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

helt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: helt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy and enhancer of split-related protein helt
translation: MASKMKDRKRTPISHKVIEKRRRDRINRCLNELGKTVPMARAKQNSGKLEKAEILEMTVQYLRALHSADFPRGREKGELLGEFANYFHYGYHECMKNLVHYLTTEERVETKDIKYARILAFLQSKSRVATEPVFGSLGAFPDQADYLCQLHSSPESLQSHSPNDSVFQQSPPGHFSWHSTARSPTISYPTVPLSAPTQQHHGGYLSPVQGLDHHYFNFFNGHPHANAFSLHSTQHAL
SIO_010081: helt
subclass of: SO_0000673
so part of: helt
location: join(753835..753861,754464..754568,754800..754896,755142..755626)
location: region:753835-755626:1
so has part: feature:753835-753861:1:exon
so has part: feature:754464-754568:1:exon
so has part: feature:754800-754896:1:exon
so has part: feature:755142-755626:1:exon

XP_024254017.1
type: Protein
SIO_000068: ncbiprotein

position:753835:1
position: 753835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755626:1
position: 755626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753835-753861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754464-754568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754800-754896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755142-755626:1:exon

si:ch211-197n1.2
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: si:ch211-197n1.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(767066..812014)
location: region:767066-812014:-1
so has part: feature:767066-812014:-1:exon
subclass of: SO_0000010

112231670
type: Gene
SIO_000068: ncbigene

position:767066:-1
position: 767066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812014:-1
position: 812014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767066-812014:-1:exon

si:ch211-197n1.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: si:ch211-197n1.2
product: uncharacterized si:ch211-197n1.2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_024398374.2
SIO_010081: si:ch211-197n1.2
subclass of: SO_0000673
so part of: si:ch211-197n1.2
location: complement(join(767066..768326,768701..768872,769114..769286,780960..781203,784162..784286,788807..788942,808620..808730,811894..812014))
location: region:767066-812014:-1
so has part: feature:811894-812014:-1:exon
so has part: feature:808620-808730:-1:exon
so has part: feature:788807-788942:-1:exon
so has part: feature:784162-784286:-1:exon
so has part: feature:780960-781203:-1:exon
so has part: feature:769114-769286:-1:exon
so has part: feature:768701-768872:-1:exon
so has part: feature:767066-768326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811894-812014:-1:exon

position:811894:-1
position: 811894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808620-808730:-1:exon

position:808620:-1
position: 808620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808730:-1
position: 808730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788807-788942:-1:exon

position:788807:-1
position: 788807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788942:-1
position: 788942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784162-784286:-1:exon

position:784162:-1
position: 784162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784286:-1
position: 784286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:780960-781203:-1:exon

position:780960:-1
position: 780960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781203:-1
position: 781203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:769114-769286:-1:exon

position:769114:-1
position: 769114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769286:-1
position: 769286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768701-768872:-1:exon

position:768701:-1
position: 768701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768872:-1
position: 768872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767066-768326:-1:exon

position:768326:-1
position: 768326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-197n1.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: si:ch211-197n1.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-197n1.2
translation: MAAFDTRRGVPSLFEASPAGNLGRTNEEQEGLNVQLENEESGTLGRGRSVAQLFQIIKALVKNHYQAAERVFEKLDEKNTKRLSQETFYQLLKRFDIHPEVSRGEIRHLWVTLITNQDRTLDFLQLARHFGYSPKSSCFPNAKRSPPKKGDENLRQCSRKLHCVSDILADGVRAKVELSLDELRAEFEELDPYRTGFVSQEEFQEVLKGLCVHLDDYEWEMLAQKFDINRDGRVSFVEFLRPFGRRKQPWRHGSNMAGILQFHNETEDLSAEKGSSLCDQVPLSSRLRKKLQRQGKILRRAFHRLDSSDSGYLSPGEFRAALRLCDVPLDPEEYYHVLAGLDRDLAGRVAYRRLIQDIRKRRTSGTRVKSHHHPS
SIO_010081: si:ch211-197n1.2
subclass of: SO_0000673
so part of: si:ch211-197n1.2
location: complement(join(768069..768326,768701..768872,769114..769286,780960..781203,784162..784286,788807..788942,808620..808639))
location: region:768069-808639:-1
so has part: feature:808620-808639:-1:exon
so has part: feature:788807-788942:-1:exon
so has part: feature:784162-784286:-1:exon
so has part: feature:780960-781203:-1:exon
so has part: feature:769114-769286:-1:exon
so has part: feature:768701-768872:-1:exon
so has part: feature:768069-768326:-1:exon

XP_024254142.1
type: Protein
SIO_000068: ncbiprotein

position:768069:-1
position: 768069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808639:-1
position: 808639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808620-808639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788807-788942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784162-784286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780960-781203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769114-769286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768701-768872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768069-768326:-1:exon

LOC121841758
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(827414..841658)
location: region:827414-841658:-1
so has part: feature:827414-841658:-1:exon
subclass of: SO_0000010

121841758
type: Gene
SIO_000068: ncbigene

position:827414:-1
position: 827414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841658:-1
position: 841658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827414-841658:-1:exon

LOC121841758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841758
product: uncharacterized LOC121841758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042311770.1
SIO_010081: LOC121841758
subclass of: SO_0000673
so part of: LOC121841758
location: complement(join(827414..827743,833983..834171,837321..837398,837727..837827,839047..839213,840606..841658))
location: region:827414-841658:-1
so has part: feature:840606-841658:-1:exon
so has part: feature:839047-839213:-1:exon
so has part: feature:837727-837827:-1:exon
so has part: feature:837321-837398:-1:exon
so has part: feature:833983-834171:-1:exon
so has part: feature:827414-827743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840606-841658:-1:exon

position:840606:-1
position: 840606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:839047-839213:-1:exon

position:839047:-1
position: 839047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839213:-1
position: 839213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837727-837827:-1:exon

position:837727:-1
position: 837727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837827:-1
position: 837827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:837321-837398:-1:exon

position:837321:-1
position: 837321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837398:-1
position: 837398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833983-834171:-1:exon

position:833983:-1
position: 833983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834171:-1
position: 834171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:827414-827743:-1:exon

position:827743:-1
position: 827743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121841758
translation: MTDTMSRLSSVASLRLPAIQHPLSRLIDPETLSLRGYSRNYAGSDEVVPPLLRDVDLDFVFRGQNTRRATGYPYDKAPPKQSSFSLVSQPIPEGVEVSVALDPVKPRLPIFGQRVAPESRGSRVTSLTSTIKTSITSQTNTSRTSILTRTTTAASCPEAQLRIQVDQLEHELRQNIQLLGHLNLQRMFKNNHPEGKALANRDVLLMILTKFLGRFITLQQYSQLLLRLHLSKKAAISFEELWEAIRESGAGGPATWFNPTQDPSTATPLSPAKVTASQTLSLLRGQAQNRFLKVIESRPTELGLQRISLIVAPELKRCLAQLGLNLEDREFEKLWKKCVSPLKISLYICINNL
SIO_010081: LOC121841758
subclass of: SO_0000673
so part of: LOC121841758
location: complement(join(827551..827743,833983..834171,837321..837398,837727..837827,839047..839213,840606..840939))
location: region:827551-840939:-1
so has part: feature:840606-840939:-1:exon
so has part: feature:839047-839213:-1:exon
so has part: feature:837727-837827:-1:exon
so has part: feature:837321-837398:-1:exon
so has part: feature:833983-834171:-1:exon
so has part: feature:827551-827743:-1:exon

XP_042167704.1
type: Protein
SIO_000068: ncbiprotein

position:827551:-1
position: 827551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840939:-1
position: 840939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840606-840939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839047-839213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837727-837827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837321-837398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833983-834171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827551-827743:-1:exon

slc25a4
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: slc25a4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 843556..846639
location: region:843556-846639:1
so has part: feature:843556-846639:1:exon
subclass of: SO_0000010

112231671
type: Gene
SIO_000068: ncbigene

position:843556:1
position: 843556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846639:1
position: 846639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843556-846639:1:exon

slc25a4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: slc25a4
product: solute carrier family 25 member 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398375.2
SIO_010081: slc25a4
subclass of: SO_0000673
so part of: slc25a4
location: join(843556..843776,845064..845550,845681..845821,846012..846639)
location: region:843556-846639:1
so has part: feature:843556-843776:1:exon
so has part: feature:845064-845550:1:exon
so has part: feature:845681-845821:1:exon
so has part: feature:846012-846639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:843556-843776:1:exon

position:843776:1
position: 843776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845064-845550:1:exon

position:845064:1
position: 845064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845550:1
position: 845550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:845681-845821:1:exon

position:845681:1
position: 845681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845821:1
position: 845821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846012-846639:1:exon

position:846012:1
position: 846012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc25a4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: slc25a4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP/ATP translocase 1
translation: MSDAVVSFIKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASQQITKEMQYKGIMDCVRRIPKEQGFISFWRGNLANVIRYFPTQALNFAFKDKYKKIFLGGVDQKTQFWRWFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKSGAEREFSGLGSCLSKIYKADGIKGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGIISYPFDTVRRRMMMQSGRKSADIMYTGTIDCWKKIAKNEGGKAFFKGAWSNVIRGMGGAFVLVLYDEIKKYT
SIO_010081: slc25a4
subclass of: SO_0000673
so part of: slc25a4
location: join(843666..843776,845064..845550,845681..845821,846012..846169)
location: region:843666-846169:1
so has part: feature:843666-843776:1:exon
so has part: feature:845064-845550:1:exon
so has part: feature:845681-845821:1:exon
so has part: feature:846012-846169:1:exon

XP_024254143.1
type: Protein
SIO_000068: ncbiprotein

position:843666:1
position: 843666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846169:1
position: 846169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843666-843776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845064-845550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845681-845821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846012-846169:1:exon

cfap97
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: cfap97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(847742..882220)
location: region:847742-882220:-1
so has part: feature:847742-882220:-1:exon
subclass of: SO_0000010

112231668
type: Gene
SIO_000068: ncbigene

position:847742:-1
position: 847742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882220:-1
position: 882220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847742-882220:-1:exon

cfap97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: cfap97
product: cilia and flagella associated protein 97, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398373.1
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(847742..848503,870942..871243,871467..871851,874893..875061,879680..879861,880757..881110,881976..882220))
location: region:847742-882220:-1
so has part: feature:881976-882220:-1:exon
so has part: feature:880757-881110:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:847742-848503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881976-882220:-1:exon

position:881976:-1
position: 881976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880757-881110:-1:exon

position:880757:-1
position: 880757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881110:-1
position: 881110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:879680-879861:-1:exon

position:879680:-1
position: 879680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879861:-1
position: 879861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:874893-875061:-1:exon

position:874893:-1
position: 874893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875061:-1
position: 875061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:871467-871851:-1:exon

position:871467:-1
position: 871467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871851:-1
position: 871851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870942-871243:-1:exon

position:870942:-1
position: 870942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871243:-1
position: 871243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:847742-848503:-1:exon

position:848503:-1
position: 848503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cfap97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: cfap97
product: cilia and flagella associated protein 97, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398371.2
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(847742..848503,850272..850440,870942..871243,871467..871851,874893..875061,879680..879861,880757..881110,881976..882219))
location: region:847742-882219:-1
so has part: feature:881976-882219:-1:exon
so has part: feature:880757-881110:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:850272-850440:-1:exon
so has part: feature:847742-848503:-1:exon

position:882219:-1
position: 882219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881976-882219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880757-881110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879680-879861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874893-875061:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871467-871851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870942-871243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850272-850440:-1:exon

position:850272:-1
position: 850272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850440:-1
position: 850440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:847742-848503:-1:exon

cfap97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: cfap97
product: cilia and flagella associated protein 97, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398372.2
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(847742..848503,850272..850440,870942..871243,871467..871851,874893..875061,879680..879861,880757..881110,881617..881696))
location: region:847742-881696:-1
so has part: feature:881617-881696:-1:exon
so has part: feature:880757-881110:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:850272-850440:-1:exon
so has part: feature:847742-848503:-1:exon

position:881696:-1
position: 881696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881617-881696:-1:exon

position:881617:-1
position: 881617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880757-881110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879680-879861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874893-875061:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871467-871851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870942-871243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850272-850440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847742-848503:-1:exon

cfap97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: cfap97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 97 isoform X2
translation: MYSPKELEGEVDHSFFDSDADCDSISKEQGKSERKSEISSEARKEPDIQPEAPQTERHSGTERSCGGTRDPSPAGVIFQPRTEEKGHGFEAEDRRSRSSSISSNKSESEVKDGSGAEEVSSIHSKSSSDIRTASSAEEQEEGADDDEDGYHQSQDESEEESGRPLGQRLIPGPNGTQHGIPKKPVRKLRHRSLSPSSTSSESETDESYSSGESCSSEPSHSVDMVHTGCPEPSPKPGLPTHQTSMPSSPRWRPPRLGSAAPREIPHTTITLEEEEDTVTDVTPLSTPDVSPAQSLDLGVGRVVVEEEGVGPGGVGVRQQQHRGTEGSAPTGNLSSIPQEEEEGGSWNPDVEEAFLSRLGSGLSIDCPSGGRNRKNYSFSNDEVRQIDRENQRLLRQLSRPSPHSRPGSTGGTSTTSSSRRRSNGGGGGPPPVRLYHSALNRQREQQRIEKENLERAPGLAVPTATTIVPGHHLPSLPPPHPYPGTPVWQRPEQHGPESCAQGGAPFPNSPTPSKSLPISQ
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(848300..848503,870942..871243,871467..871851,874893..875061,879680..879861,880757..881077))
location: region:848300-881077:-1
so has part: feature:880757-881077:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:848300-848503:-1:exon

XP_024254141.1
type: Protein
SIO_000068: ncbiprotein

position:848300:-1
position: 848300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881077:-1
position: 881077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880757-881077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:879680-879861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874893-875061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871467-871851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870942-871243:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848300-848503:-1:exon

cfap97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: cfap97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 97 isoform X1
translation: MYSPKELEGEVDHSFFDSDADCDSISKEQGKSERKSEISSEARKEPDIQPEAPQTERHSGTERSCGGTRDPSPAGVIFQPRTEEKGHGFEAEDRRSRSSSISSNKSESEVKDGSGAEEVSSIHSKSSSDIRTASSAEEQEEGADDDEDGYHQSQDESEEESGRPLGQRLIPGPNGTQHGIPKKPVRKLRHRSLSPSSTSSESETDESYSSGESCSSEPSHSVDMVHTGCPEPSPKPGLPTHQTSMPSSPRWRPPRLGSAAPREIPHTTITLEEEEDTVTDVTPLSTPDVSPAQSLDLGVGRVVVEEEGVGPGGVGVRQQQHRGTEGSAPTGNLSSIPQEEEEGGSWNPDVEEAFLSRLGSGLSIDCPSGGRNRKNYSFSNDEVRQIDRENQRLLRQLSRPSPHSRPGSTGGTSTTSSSRRRSNGGGGGPPPVRLYHSALNRQREQQRIEKENLAFLRRLESVRPTRGMKRAEQLADYQRQAGYLGIATSLSAMDRSPSKMERSSSRTSPGKSPRPGSTNRNHHSARASSAIATTSTPLPRHASMAASRAAWS
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(848373..848503,850272..850440,870942..871243,871467..871851,874893..875061,879680..879861,880757..881077))
location: region:848373-881077:-1
so has part: feature:880757-881077:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:850272-850440:-1:exon
so has part: feature:848373-848503:-1:exon

XP_024254139.1
type: Protein
SIO_000068: ncbiprotein

position:848373:-1
position: 848373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880757-881077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:879680-879861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874893-875061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871467-871851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870942-871243:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850272-850440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848373-848503:-1:exon

cfap97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: cfap97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 97 isoform X1
translation: MYSPKELEGEVDHSFFDSDADCDSISKEQGKSERKSEISSEARKEPDIQPEAPQTERHSGTERSCGGTRDPSPAGVIFQPRTEEKGHGFEAEDRRSRSSSISSNKSESEVKDGSGAEEVSSIHSKSSSDIRTASSAEEQEEGADDDEDGYHQSQDESEEESGRPLGQRLIPGPNGTQHGIPKKPVRKLRHRSLSPSSTSSESETDESYSSGESCSSEPSHSVDMVHTGCPEPSPKPGLPTHQTSMPSSPRWRPPRLGSAAPREIPHTTITLEEEEDTVTDVTPLSTPDVSPAQSLDLGVGRVVVEEEGVGPGGVGVRQQQHRGTEGSAPTGNLSSIPQEEEEGGSWNPDVEEAFLSRLGSGLSIDCPSGGRNRKNYSFSNDEVRQIDRENQRLLRQLSRPSPHSRPGSTGGTSTTSSSRRRSNGGGGGPPPVRLYHSALNRQREQQRIEKENLAFLRRLESVRPTRGMKRAEQLADYQRQAGYLGIATSLSAMDRSPSKMERSSSRTSPGKSPRPGSTNRNHHSARASSAIATTSTPLPRHASMAASRAAWS
SIO_010081: cfap97
subclass of: SO_0000673
so part of: cfap97
location: complement(join(848373..848503,850272..850440,870942..871243,871467..871851,874893..875061,879680..879861,880757..881077))
location: region:848373-881077:-1
so has part: feature:880757-881077:-1:exon
so has part: feature:879680-879861:-1:exon
so has part: feature:874893-875061:-1:exon
so has part: feature:871467-871851:-1:exon
so has part: feature:870942-871243:-1:exon
so has part: feature:850272-850440:-1:exon
so has part: feature:848373-848503:-1:exon

XP_024254140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:880757-881077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:879680-879861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874893-875061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871467-871851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870942-871243:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850272-850440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848373-848503:-1:exon

trnar-ucu
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: trnar-ucu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 868301..868392
location: region:868301-868392:1
so has part: feature:868301-868392:1:exon
subclass of: SO_0000663

112232067
type: Gene
SIO_000068: ncbigene

position:868301:1
position: 868301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868392:1
position: 868392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868301-868392:1:exon

trnar-ucu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 74940
gene: trnar-ucu
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:868334..868336,aa:Arg,seq:tct)
SIO_010081: trnar-ucu
subclass of: SO_0000673
so part of: trnar-ucu
location: join(868301..868337,868357..868392)
location: region:868301-868392:1
so has part: feature:868301-868337:1:exon
so has part: feature:868357-868392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868301-868337:1:exon

position:868337:1
position: 868337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868357-868392:1:exon

position:868357:1
position: 868357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ankrd37
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: ankrd37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 910562..913974
location: region:910562-913974:1
so has part: feature:910562-913974:1:exon
subclass of: SO_0000010

112231673
type: Gene
SIO_000068: ncbigene

position:910562:1
position: 910562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913974:1
position: 913974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910562-913974:1:exon

ankrd37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: ankrd37
product: ankyrin repeat domain 37
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398378.2
SIO_010081: ankrd37
subclass of: SO_0000673
so part of: ankrd37
location: join(910562..910748,911264..911413,912176..912267,912635..913974)
location: region:910562-913974:1
so has part: feature:910562-910748:1:exon
so has part: feature:911264-911413:1:exon
so has part: feature:912176-912267:1:exon
so has part: feature:912635-913974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910562-910748:1:exon

position:910748:1
position: 910748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:911264-911413:1:exon

position:911264:1
position: 911264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911413:1
position: 911413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912176-912267:1:exon

position:912176:1
position: 912176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912267:1
position: 912267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912635-913974:1:exon

position:912635:1
position: 912635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ankrd37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: ankrd37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 37
translation: MFLLDSDSQLDCISNLFEGGDAVNSSNVLGQSPAHLAACSGQAFCLLWLLQTGADANQQDNNGETPMHKAAKAGSLECISVLVASDAQLGLCNNEGRTAEELALSYGFEECGRFLNTLRMTRLLTNSSTPLMMPAGLVACPLTGAQSSKVAGQKRALIATGAQDRKRARDW
SIO_010081: ankrd37
subclass of: SO_0000673
so part of: ankrd37
location: join(910722..910748,911264..911413,912176..912267,912635..912881)
location: region:910722-912881:1
so has part: feature:910722-910748:1:exon
so has part: feature:911264-911413:1:exon
so has part: feature:912176-912267:1:exon
so has part: feature:912635-912881:1:exon

XP_024254146.1
type: Protein
SIO_000068: ncbiprotein

position:910722:1
position: 910722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912881:1
position: 912881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910722-910748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911264-911413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912176-912267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912635-912881:1:exon

ufsp2
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: ufsp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(913963..932049)
location: region:913963-932049:-1
so has part: feature:913963-932049:-1:exon
subclass of: SO_0000010

112231672
type: Gene
SIO_000068: ncbigene

position:913963:-1
position: 913963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932049:-1
position: 932049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913963-932049:-1:exon

ufsp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: ufsp2
product: ufm1-specific peptidase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398377.2
SIO_010081: ufsp2
subclass of: SO_0000673
so part of: ufsp2
location: complement(join(913963..914152,915422..915546,915925..916001,916179..916303,916764..916928,917204..917350,918456..918648,919047..919201,919384..919447,919749..919932,925264..925333,931943..932049))
location: region:913963-932049:-1
so has part: feature:931943-932049:-1:exon
so has part: feature:925264-925333:-1:exon
so has part: feature:919749-919932:-1:exon
so has part: feature:919384-919447:-1:exon
so has part: feature:919047-919201:-1:exon
so has part: feature:918456-918648:-1:exon
so has part: feature:917204-917350:-1:exon
so has part: feature:916764-916928:-1:exon
so has part: feature:916179-916303:-1:exon
so has part: feature:915925-916001:-1:exon
so has part: feature:915422-915546:-1:exon
so has part: feature:913963-914152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931943-932049:-1:exon

position:931943:-1
position: 931943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:925264-925333:-1:exon

position:925264:-1
position: 925264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925333:-1
position: 925333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919749-919932:-1:exon

position:919749:-1
position: 919749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919932:-1
position: 919932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:919384-919447:-1:exon

position:919384:-1
position: 919384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919447:-1
position: 919447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:919047-919201:-1:exon

position:919047:-1
position: 919047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919201:-1
position: 919201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:918456-918648:-1:exon

position:918456:-1
position: 918456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918648:-1
position: 918648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917204-917350:-1:exon

position:917204:-1
position: 917204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917350:-1
position: 917350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:916764-916928:-1:exon

position:916764:-1
position: 916764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916928:-1
position: 916928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:916179-916303:-1:exon

position:916179:-1
position: 916179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916303:-1
position: 916303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:915925-916001:-1:exon

position:915925:-1
position: 915925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916001:-1
position: 916001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:915422-915546:-1:exon

position:915422:-1
position: 915422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915546:-1
position: 915546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:913963-914152:-1:exon

position:914152:-1
position: 914152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ufsp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: ufsp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ufm1-specific protease 2
translation: MVVGNIILRLRGSLEFKCQLDSTDVPHVQKVISRTFEALGSQVKAESLVLSLSSSPVFLWPNKGGHATAGEISPNRPCKDLQQLIQTDDQESSRKKSAKKDKKNPTAGIINLTLMTEVTEPGVLSAPTLLRGSKKHHLLQTTLPMDCVVSVLSSESISVVCGTLVGALCSQLGDMEKVALRHMKGTALLIPQPFHFLLPAPVGLVTVVYPAGVPDSQLETRRKELHSLFELPDDRPYLRRANALHFPDEPYKDGYLRNPHVHLNLPALENGKPYLVQGVYSYHHYMQDRVDDNGWGCAYRSLQTICSWFQQQGYVERAVPSHKEIQQALVEVGDKQGSFLGSRQWIGSIEVAAVLDQLLGVTSKIMFVSQGSELASKGRELANHFLSEGTPIMIGGGVLAHTILGVAWSETTGQIRYLILDPHYTGAEDLQVITDKGWCGWKGPEFWDQNAYYNLCLPQRPKTI
SIO_010081: ufsp2
subclass of: SO_0000673
so part of: ufsp2
location: complement(join(914066..914152,915422..915546,915925..916001,916179..916303,916764..916928,917204..917350,918456..918648,919047..919201,919384..919447,919749..919932,925264..925333,931943..931945))
location: region:914066-931945:-1
so has part: feature:931943-931945:-1:exon
so has part: feature:925264-925333:-1:exon
so has part: feature:919749-919932:-1:exon
so has part: feature:919384-919447:-1:exon
so has part: feature:919047-919201:-1:exon
so has part: feature:918456-918648:-1:exon
so has part: feature:917204-917350:-1:exon
so has part: feature:916764-916928:-1:exon
so has part: feature:916179-916303:-1:exon
so has part: feature:915925-916001:-1:exon
so has part: feature:915422-915546:-1:exon
so has part: feature:914066-914152:-1:exon

XP_024254145.1
type: Protein
SIO_000068: ncbiprotein

position:914066:-1
position: 914066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931945:-1
position: 931945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931943-931945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:925264-925333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919749-919932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919384-919447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919047-919201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918456-918648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917204-917350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:916764-916928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916179-916303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:915925-916001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:915422-915546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:914066-914152:-1:exon

LOC112231575
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938508..942364)
location: region:938508-942364:-1
so has part: feature:938508-942364:-1:exon
subclass of: SO_0000010

112231575
type: Gene
SIO_000068: ncbigene

position:938508:-1
position: 938508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942364:-1
position: 942364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938508-942364:-1:exon

LOC112231575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231575
product: NXPE family member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042312085.1
SIO_010081: LOC112231575
subclass of: SO_0000673
so part of: LOC112231575
location: complement(join(938508..940030,940140..940358,940636..940706,940852..941633,942067..942364))
location: region:938508-942364:-1
so has part: feature:942067-942364:-1:exon
so has part: feature:940852-941633:-1:exon
so has part: feature:940636-940706:-1:exon
so has part: feature:940140-940358:-1:exon
so has part: feature:938508-940030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:942067-942364:-1:exon

position:942067:-1
position: 942067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940852-941633:-1:exon

position:940852:-1
position: 940852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941633:-1
position: 941633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:940636-940706:-1:exon

position:940636:-1
position: 940636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940706:-1
position: 940706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940140-940358:-1:exon

position:940140:-1
position: 940140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940358:-1
position: 940358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:938508-940030:-1:exon

position:940030:-1
position: 940030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NXPE family member 3-like
translation: MWRSLSKYVCVFFLLALSGLFFLINNINVLENLNCQTVSTLYQLQSSIHTAFFSEAHFPLDRNHSYCGLLGQEPSPEEALEERYLLESIAWPEPMHHSESVSLDHTSDPAHSFFVILPARGRSEWYVGDQLEAFVQMYDFQGHPKSHGGDFLLARLHSSELEAGVAGQVLDHRNGTYSAIFPLLWQGSAQVEMTLVHPSEAVHVLRRLREERPDRVFFKSLFRSGKLSQTTVCNLCLPTSQKPLCNYTDAHTEEPWYCYKPKLLSCDTRINHAKGGYVKGLLTNKEALLFQGGVNIKVHIHPSGSDSVTVLPEKKDKADERSSMKMEPTRITPSGYYFQGSWRALTGGVIRQFNDSSAITQCLKGKVVYMYGDSTARQWFEYLNDLLPELKQFNLHSPKNVGPNMAVDSTHNILLRYRCHGPPIRFTNVIASEMRYVANELDGLTGGSNTVVFISIWSHFSTFPVQVYIRRLRHIRRAMVRLLDRAPGTMVVLRSANLQALDPEVSLYNSDWYSLQLDWVLRAMFRGLDILLIDAWEMTLGHHLPHALHPPPIIIKNMIDIILSRICP
SIO_010081: LOC112231575
subclass of: SO_0000673
so part of: LOC112231575
location: complement(join(939489..940030,940140..940358,940636..940706,940852..941633,942067..942159))
location: region:939489-942159:-1
so has part: feature:942067-942159:-1:exon
so has part: feature:940852-941633:-1:exon
so has part: feature:940636-940706:-1:exon
so has part: feature:940140-940358:-1:exon
so has part: feature:939489-940030:-1:exon

XP_042168019.1
type: Protein
SIO_000068: ncbiprotein

position:939489:-1
position: 939489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942159:-1
position: 942159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942067-942159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940852-941633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940636-940706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940140-940358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939489-940030:-1:exon

LOC112231547
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231547
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969664..972763)
location: region:969664-972763:-1
so has part: feature:969664-972763:-1:exon
subclass of: SO_0000011

112231547
type: Gene
SIO_000068: ncbigene

position:969664:-1
position: 969664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972763:-1
position: 972763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969664-972763:-1:exon

LOC112231547
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC112231547
product: uncharacterized LOC112231547
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_002950489.2
SIO_010081: LOC112231547
subclass of: SO_0000673
so part of: LOC112231547
location: complement(join(969664..970299,972340..972763))
location: region:969664-972763:-1
so has part: feature:972340-972763:-1:exon
so has part: feature:969664-970299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972340-972763:-1:exon

position:972340:-1
position: 972340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969664-970299:-1:exon

position:970299:-1
position: 970299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

map9
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: map9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(984215..1005527)
location: region:984215-1005527:-1
so has part: feature:984215-1005527:-1:exon
subclass of: SO_0000010

112231674
type: Gene
SIO_000068: ncbigene

position:984215:-1
position: 984215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005527:-1
position: 1005527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984215-1005527:-1:exon

map9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: map9
product: microtubule-associated protein 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398380.2
SIO_010081: map9
subclass of: SO_0000673
so part of: map9
location: complement(join(984215..984467,986449..986584,986944..987089,987862..988023,988298..988387,989156..989318,990934..991004,993291..993358,995941..996052,998111..998340,998521..999075,999254..999338,1004654..1004730,1005436..1005527))
location: region:984215-1005527:-1
so has part: feature:1005436-1005527:-1:exon
so has part: feature:1004654-1004730:-1:exon
so has part: feature:999254-999338:-1:exon
so has part: feature:998521-999075:-1:exon
so has part: feature:998111-998340:-1:exon
so has part: feature:995941-996052:-1:exon
so has part: feature:993291-993358:-1:exon
so has part: feature:990934-991004:-1:exon
so has part: feature:989156-989318:-1:exon
so has part: feature:988298-988387:-1:exon
so has part: feature:987862-988023:-1:exon
so has part: feature:986944-987089:-1:exon
so has part: feature:986449-986584:-1:exon
so has part: feature:984215-984467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1005436-1005527:-1:exon

position:1005436:-1
position: 1005436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004654-1004730:-1:exon

position:1004654:-1
position: 1004654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004730:-1
position: 1004730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:999254-999338:-1:exon

position:999254:-1
position: 999254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999338:-1
position: 999338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998521-999075:-1:exon

position:998521:-1
position: 998521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999075:-1
position: 999075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998111-998340:-1:exon

position:998111:-1
position: 998111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998340:-1
position: 998340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995941-996052:-1:exon

position:995941:-1
position: 995941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996052:-1
position: 996052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993291-993358:-1:exon

position:993291:-1
position: 993291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993358:-1
position: 993358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:990934-991004:-1:exon

position:990934:-1
position: 990934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991004:-1
position: 991004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:989156-989318:-1:exon

position:989156:-1
position: 989156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989318:-1
position: 989318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:988298-988387:-1:exon

position:988298:-1
position: 988298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988387:-1
position: 988387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:987862-988023:-1:exon

position:987862:-1
position: 987862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988023:-1
position: 988023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:986944-987089:-1:exon

position:986944:-1
position: 986944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987089:-1
position: 987089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:986449-986584:-1:exon

position:986449:-1
position: 986449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986584:-1
position: 986584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:984215-984467:-1:exon

position:984467:-1
position: 984467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

map9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: map9
product: microtubule-associated protein 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398379.2
SIO_010081: map9
subclass of: SO_0000673
so part of: map9
location: complement(join(984215..984467,986449..986584,986944..987089,987862..988023,988298..988387,989156..989318,990934..991004,993291..993358,995941..996052,998111..998340,998521..999075,999254..999338,1004654..1004730,1004993..1005252))
location: region:984215-1005252:-1
so has part: feature:1004993-1005252:-1:exon
so has part: feature:1004654-1004730:-1:exon
so has part: feature:999254-999338:-1:exon
so has part: feature:998521-999075:-1:exon
so has part: feature:998111-998340:-1:exon
so has part: feature:995941-996052:-1:exon
so has part: feature:993291-993358:-1:exon
so has part: feature:990934-991004:-1:exon
so has part: feature:989156-989318:-1:exon
so has part: feature:988298-988387:-1:exon
so has part: feature:987862-988023:-1:exon
so has part: feature:986944-987089:-1:exon
so has part: feature:986449-986584:-1:exon
so has part: feature:984215-984467:-1:exon

position:1005252:-1
position: 1005252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004993-1005252:-1:exon

position:1004993:-1
position: 1004993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004654-1004730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:999254-999338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998521-999075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998111-998340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995941-996052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993291-993358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990934-991004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:989156-989318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988298-988387:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987862-988023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986944-987089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:986449-986584:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984215-984467:-1:exon

map9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: map9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 9
translation: MADKDFSTTLAYTKSPKASRRTHFQDELEAAVSARASKKKTDQYSYSDDFDENDVLKELLNSRKKRIDTFKAGKKKAKINDFNLSDDEEESKRPTRVSFMKTRKATSPLQDLATPDPHKNEQTNGFIGGSSDQKDSDSSLHIKNPHEDYTETSASQNSQLKSPLSLPSQPSQTESPLQSTSENNSHWDSPLPLPSNGGLLETPLPLPSENSVESKESGTGGKGKLATPLPLIRCASLTDSVVENEPPRPKPRQRTLRVSSQTEAEPVAVDKETPPSRPPTSSVSISLSSIDQGEMASTPTTSSSSKTSARSHSRQGPVGDHSISSKLRKSSSSTVGRQSNSLYKSTDGTWSRDGHTSEDSKAKDGKYSTSFEEYQDDSEDHPDHISRLSHVTENSIDTRPSSSLTKSSRKSQSVCSYTAESKYLGSLKVLDRKVQLKEAEPGSADSLRAAIYQEWLKKKREKLQETMQTRKEELTLKEEKRRKDEQAKMDDAKASYEAWKEKKTEVIKAKVKEKQDVIKKKQREMYEQEEKKESAKKVFEKWKQGHDELLKEKYTKQKEVENKLKQKKEEKEEERKRDSISAISIWNERKKDVVHEKVKTERRKEKIKEEEERYEKEEKDRMALEMYEKWLRRKERQQTRQRKERQIQAILQDDPPPPWSPPSKTVPFGK
SIO_010081: map9
subclass of: SO_0000673
so part of: map9
location: complement(join(984348..984467,986449..986584,986944..987089,987862..988023,988298..988387,989156..989318,990934..991004,993291..993358,995941..996052,998111..998340,998521..999075,999254..999338,1004654..1004728))
location: region:984348-1004728:-1
so has part: feature:1004654-1004728:-1:exon
so has part: feature:999254-999338:-1:exon
so has part: feature:998521-999075:-1:exon
so has part: feature:998111-998340:-1:exon
so has part: feature:995941-996052:-1:exon
so has part: feature:993291-993358:-1:exon
so has part: feature:990934-991004:-1:exon
so has part: feature:989156-989318:-1:exon
so has part: feature:988298-988387:-1:exon
so has part: feature:987862-988023:-1:exon
so has part: feature:986944-987089:-1:exon
so has part: feature:986449-986584:-1:exon
so has part: feature:984348-984467:-1:exon

XP_024254147.1
type: Protein
SIO_000068: ncbiprotein

position:984348:-1
position: 984348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004728:-1
position: 1004728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004654-1004728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999254-999338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998521-999075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998111-998340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:995941-996052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993291-993358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:990934-991004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989156-989318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988298-988387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987862-988023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986944-987089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986449-986584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984348-984467:-1:exon

map9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: map9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 9
translation: MADKDFSTTLAYTKSPKASRRTHFQDELEAAVSARASKKKTDQYSYSDDFDENDVLKELLNSRKKRIDTFKAGKKKAKINDFNLSDDEEESKRPTRVSFMKTRKATSPLQDLATPDPHKNEQTNGFIGGSSDQKDSDSSLHIKNPHEDYTETSASQNSQLKSPLSLPSQPSQTESPLQSTSENNSHWDSPLPLPSNGGLLETPLPLPSENSVESKESGTGGKGKLATPLPLIRCASLTDSVVENEPPRPKPRQRTLRVSSQTEAEPVAVDKETPPSRPPTSSVSISLSSIDQGEMASTPTTSSSSKTSARSHSRQGPVGDHSISSKLRKSSSSTVGRQSNSLYKSTDGTWSRDGHTSEDSKAKDGKYSTSFEEYQDDSEDHPDHISRLSHVTENSIDTRPSSSLTKSSRKSQSVCSYTAESKYLGSLKVLDRKVQLKEAEPGSADSLRAAIYQEWLKKKREKLQETMQTRKEELTLKEEKRRKDEQAKMDDAKASYEAWKEKKTEVIKAKVKEKQDVIKKKQREMYEQEEKKESAKKVFEKWKQGHDELLKEKYTKQKEVENKLKQKKEEKEEERKRDSISAISIWNERKKDVVHEKVKTERRKEKIKEEEERYEKEEKDRMALEMYEKWLRRKERQQTRQRKERQIQAILQDDPPPPWSPPSKTVPFGK
SIO_010081: map9
subclass of: SO_0000673
so part of: map9
location: complement(join(984348..984467,986449..986584,986944..987089,987862..988023,988298..988387,989156..989318,990934..991004,993291..993358,995941..996052,998111..998340,998521..999075,999254..999338,1004654..1004728))
location: region:984348-1004728:-1
so has part: feature:1004654-1004728:-1:exon
so has part: feature:999254-999338:-1:exon
so has part: feature:998521-999075:-1:exon
so has part: feature:998111-998340:-1:exon
so has part: feature:995941-996052:-1:exon
so has part: feature:993291-993358:-1:exon
so has part: feature:990934-991004:-1:exon
so has part: feature:989156-989318:-1:exon
so has part: feature:988298-988387:-1:exon
so has part: feature:987862-988023:-1:exon
so has part: feature:986944-987089:-1:exon
so has part: feature:986449-986584:-1:exon
so has part: feature:984348-984467:-1:exon

XP_024254148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1004654-1004728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999254-999338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998521-999075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998111-998340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:995941-996052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993291-993358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:990934-991004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989156-989318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988298-988387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987862-988023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986944-987089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986449-986584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984348-984467:-1:exon

gucy1a1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: gucy1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1048556..1061872
location: region:1048556-1061872:1
so has part: feature:1048556-1061872:1:exon
subclass of: SO_0000010

112231675
type: Gene
SIO_000068: ncbigene

position:1048556:1
position: 1048556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061872:1
position: 1061872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048556-1061872:1:exon

gucy1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: gucy1a1
product: guanylate cyclase 1 soluble subunit alpha 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398382.2
SIO_010081: gucy1a1
subclass of: SO_0000673
so part of: gucy1a1
location: join(1048556..1049114,1049382..1049443,1049825..1049919,1050193..1050977,1054228..1054713,1056602..1056745,1060926..1061872)
location: region:1048556-1061872:1
so has part: feature:1048556-1049114:1:exon
so has part: feature:1049382-1049443:1:exon
so has part: feature:1049825-1049919:1:exon
so has part: feature:1050193-1050977:1:exon
so has part: feature:1054228-1054713:1:exon
so has part: feature:1056602-1056745:1:exon
so has part: feature:1060926-1061872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048556-1049114:1:exon

position:1049114:1
position: 1049114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049382-1049443:1:exon

position:1049382:1
position: 1049382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049443:1
position: 1049443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1049825-1049919:1:exon

position:1049825:1
position: 1049825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049919:1
position: 1049919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1050193-1050977:1:exon

position:1050193:1
position: 1050193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050977:1
position: 1050977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1054228-1054713:1:exon

position:1054228:1
position: 1054228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054713:1
position: 1054713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1056602-1056745:1:exon

position:1056602:1
position: 1056602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056745:1
position: 1056745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1060926-1061872:1:exon

position:1060926:1
position: 1060926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gucy1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: gucy1a1
product: guanylate cyclase 1 soluble subunit alpha 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398381.2
SIO_010081: gucy1a1
subclass of: SO_0000673
so part of: gucy1a1
location: join(1048560..1049114,1049382..1049443,1049825..1049919,1050193..1050977,1054228..1054713,1056602..1056745,1059550..1059704,1060926..1061872)
location: region:1048560-1061872:1
so has part: feature:1048560-1049114:1:exon
so has part: feature:1049382-1049443:1:exon
so has part: feature:1049825-1049919:1:exon
so has part: feature:1050193-1050977:1:exon
so has part: feature:1054228-1054713:1:exon
so has part: feature:1056602-1056745:1:exon
so has part: feature:1059550-1059704:1:exon
so has part: feature:1060926-1061872:1:exon

position:1048560:1
position: 1048560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048560-1049114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049382-1049443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049825-1049919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050193-1050977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054228-1054713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056602-1056745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059550-1059704:1:exon

position:1059550:1
position: 1059550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059704:1
position: 1059704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1060926-1061872:1:exon

gucy1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: gucy1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate cyclase soluble subunit alpha-1 isoform X1
translation: MFCAKLKDLKISGECPFSGIGRMDEPGDFEECISHHTGDVLAISKDVYGNVSEVLPQRKTSKTRVNLHSLGESIRKLACPEFQRLHTAFLQMMKQHTLDTKCPSVCYADICQDRSFDRPENLMEIMKNYSLKTGIHMDALKVSLGEELFQTCFDEDGHILRVVGGALSDFLNSFNVLLKQSCSPNPLAPAALQAEPDRRTDYVNNEEASVLCLDKDLGLLTVYYFNPRQTTELFFPGVIKAAARLLYDTTVEVLMDMEMDLQEGTKESVGPLQFQAGPRQPSLLYSVVVKNAKSLSPSPMRATSVGTMPTSLFSSTFPFHLFLDQDLGLMQIGDGLRKRLSRKDGPRRPTAFLEHFAIVTPQIRCTFQGILTMLNTQFIIRIKHQGGSMADDTGRLMDLKGQMIYISESNVILFLGSPCVDKLEELTGRGLYLSDIPIHNALRDVVLVGEQAKAQDGLKKRLGKAKAALEHAHLALEEEKKRTVDLLFTIFPGTVAQELWQGHTVDAREFENVTMLFSDIVGFTAVCSRCTPMQVVTMLNELYTRFDHHCGELDVYKVETIGDAYCVAGGLHKESETHAVQIALMALKMMELSDEVRTPTGEPIKMRIGLHTGSVLAGVVGVMMPRYCLFGNNVTLANKFESCSVPRRINVSPTTHRLLKDCPEFVFIPRTRQDLPPNFPPDIPGVCYFLEAFDQWSGKTTSDCETEEPCYSNTNFMAEQT
SIO_010081: gucy1a1
subclass of: SO_0000673
so part of: gucy1a1
location: join(1048872..1049114,1049382..1049443,1049825..1049919,1050193..1050977,1054228..1054713,1056602..1056745,1059550..1059704,1060926..1061121)
location: region:1048872-1061121:1
so has part: feature:1048872-1049114:1:exon
so has part: feature:1049382-1049443:1:exon
so has part: feature:1049825-1049919:1:exon
so has part: feature:1050193-1050977:1:exon
so has part: feature:1054228-1054713:1:exon
so has part: feature:1056602-1056745:1:exon
so has part: feature:1059550-1059704:1:exon
so has part: feature:1060926-1061121:1:exon

XP_024254149.1
type: Protein
SIO_000068: ncbiprotein

position:1048872:1
position: 1048872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061121:1
position: 1061121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048872-1049114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049382-1049443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049825-1049919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050193-1050977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054228-1054713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056602-1056745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059550-1059704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1060926-1061121:1:exon

gucy1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: gucy1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate cyclase soluble subunit alpha-1 isoform X2
translation: MFCAKLKDLKISGECPFSGIGRMDEPGDFEECISHHTGDVLAISKDVYGNVSEVLPQRKTSKTRVNLHSLGESIRKLACPEFQRLHTAFLQMMKQHTLDTKCPSVCYADICQDRSFDRPENLMEIMKNYSLKTGIHMDALKVSLGEELFQTCFDEDGHILRVVGGALSDFLNSFNVLLKQSCSPNPLAPAALQAEPDRRTDYVNNEEASVLCLDKDLGLLTVYYFNPRQTTELFFPGVIKAAARLLYDTTVEVLMDMEMDLQEGTKESVGPLQFQAGPRQPSLLYSVVVKNAKSLSPSPMRATSVGTMPTSLFSSTFPFHLFLDQDLGLMQIGDGLRKRLSRKDGPRRPTAFLEHFAIVTPQIRCTFQGILTMLNTQFIIRIKHQGGSMADDTGRLMDLKGQMIYISESNVILFLGSPCVDKLEELTGRGLYLSDIPIHNALRDVVLVGEQAKAQDGLKKRLGKAKAALEHAHLALEEEKKRTVDLLFTIFPGTVAQELWQGHTVDAREFENVTMLFSDIVGFTAVCSRCTPMQVVTMLNELYTRFDHHCGELDVYKVETIGDAYCVAGGLHKESETHAVQIALMALKMMELSDEVRTPTGEPIKIAERLSRVRLHSPDQTGSSAKLPTGYSRCLLLLGGF
SIO_010081: gucy1a1
subclass of: SO_0000673
so part of: gucy1a1
location: join(1048872..1049114,1049382..1049443,1049825..1049919,1050193..1050977,1054228..1054713,1056602..1056745,1060926..1061036)
location: region:1048872-1061036:1
so has part: feature:1048872-1049114:1:exon
so has part: feature:1049382-1049443:1:exon
so has part: feature:1049825-1049919:1:exon
so has part: feature:1050193-1050977:1:exon
so has part: feature:1054228-1054713:1:exon
so has part: feature:1056602-1056745:1:exon
so has part: feature:1060926-1061036:1:exon

XP_024254150.1
type: Protein
SIO_000068: ncbiprotein

position:1061036:1
position: 1061036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048872-1049114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049382-1049443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049825-1049919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050193-1050977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054228-1054713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056602-1056745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060926-1061036:1:exon

gucy1b1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: gucy1b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1068412..1102148
location: region:1068412-1102148:1
so has part: feature:1068412-1102148:1:exon
subclass of: SO_0000010

112231676
type: Gene
SIO_000068: ncbigene

position:1068412:1
position: 1068412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102148:1
position: 1102148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068412-1102148:1:exon

gucy1b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: gucy1b1
product: guanylate cyclase 1 soluble subunit beta 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398384.2
SIO_010081: gucy1b1
subclass of: SO_0000673
so part of: gucy1b1
location: join(1068412..1068878,1069276..1069349,1071106..1071206,1071393..1071511,1074081..1074278,1075593..1075823,1076062..1076178,1076410..1076543,1078471..1078668,1084200..1084437,1092880..1093020,1100144..1100298,1100542..1102148)
location: region:1068412-1102148:1
so has part: feature:1068412-1068878:1:exon
so has part: feature:1069276-1069349:1:exon
so has part: feature:1071106-1071206:1:exon
so has part: feature:1071393-1071511:1:exon
so has part: feature:1074081-1074278:1:exon
so has part: feature:1075593-1075823:1:exon
so has part: feature:1076062-1076178:1:exon
so has part: feature:1076410-1076543:1:exon
so has part: feature:1078471-1078668:1:exon
so has part: feature:1084200-1084437:1:exon
so has part: feature:1092880-1093020:1:exon
so has part: feature:1100144-1100298:1:exon
so has part: feature:1100542-1102148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068412-1068878:1:exon

position:1068878:1
position: 1068878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069276-1069349:1:exon

position:1069276:1
position: 1069276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069349:1
position: 1069349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1071106-1071206:1:exon

position:1071106:1
position: 1071106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071206:1
position: 1071206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1071393-1071511:1:exon

position:1071393:1
position: 1071393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071511:1
position: 1071511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1074081-1074278:1:exon

position:1074081:1
position: 1074081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074278:1
position: 1074278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1075593-1075823:1:exon

position:1075593:1
position: 1075593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075823:1
position: 1075823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1076062-1076178:1:exon

position:1076062:1
position: 1076062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076178:1
position: 1076178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1076410-1076543:1:exon

position:1076410:1
position: 1076410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076543:1
position: 1076543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1078471-1078668:1:exon

position:1078471:1
position: 1078471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078668:1
position: 1078668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1084200-1084437:1:exon

position:1084200:1
position: 1084200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084437:1
position: 1084437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1092880-1093020:1:exon

position:1092880:1
position: 1092880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093020:1
position: 1093020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1100144-1100298:1:exon

position:1100144:1
position: 1100144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100298:1
position: 1100298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1100542-1102148:1:exon

position:1100542:1
position: 1100542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gucy1b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: gucy1b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate cyclase soluble subunit beta-1
translation: MYGFVNHALELLVLRNYGEEVWEDIKREAQLDVEGQFLVRIIYEDAKTYDLVAAASKVLKIDAGCILQMFGKMFFEFCQESGYDTILRVLGSNVREFLQNLDALHDHLGTIYPGMRAPSFRCTDAEKGNNLILHYYSEREGLQDIVIGIIKTVAQQIHGTEIEMKVIQHKSEECDHIKFLIEEKDSEEEAFYEDLDGFEENGTQETRISPYTFCKAFPFHLMFDRDLMLTQCGNAIFRVLPQLQPGICNLPSVFSLVRPHIDFSFQGMLSHINTVFVLRSKEGLLNVETSENEDELTGAEISCLRLKGQMIYLPEAENILFLCSPSVMNLDDLTRRGLYLSDIPLHDATRDLVLLGEQFREEYKLTQELEILTDRLQHTLRALEDEKKKTDRLLYSVLPPSVANELRHKRPVPAKRYDNVTILFSGIVGFNAFCSKHASAEGAIKIVNLLNDVYTRFDILTDSRKNPYVYKVETVGDKYMTVSGLPEPCTHHAQSICHLALDMMEIAGQVKVDEDPVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINISEYTYRCLQSAENADPQFHLEYRGPITMKGKKEPMNVYFLSRKSTESDV
SIO_010081: gucy1b1
subclass of: SO_0000673
so part of: gucy1b1
location: join(1068876..1068878,1069276..1069349,1071106..1071206,1071393..1071511,1074081..1074278,1075593..1075823,1076062..1076178,1076410..1076543,1078471..1078668,1084200..1084437,1092880..1093020,1100144..1100298,1100542..1100674)
location: region:1068876-1100674:1
so has part: feature:1068876-1068878:1:exon
so has part: feature:1069276-1069349:1:exon
so has part: feature:1071106-1071206:1:exon
so has part: feature:1071393-1071511:1:exon
so has part: feature:1074081-1074278:1:exon
so has part: feature:1075593-1075823:1:exon
so has part: feature:1076062-1076178:1:exon
so has part: feature:1076410-1076543:1:exon
so has part: feature:1078471-1078668:1:exon
so has part: feature:1084200-1084437:1:exon
so has part: feature:1092880-1093020:1:exon
so has part: feature:1100144-1100298:1:exon
so has part: feature:1100542-1100674:1:exon

XP_024254152.2
type: Protein
SIO_000068: ncbiprotein

position:1068876:1
position: 1068876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100674:1
position: 1100674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068876-1068878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069276-1069349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071106-1071206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071393-1071511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074081-1074278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075593-1075823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076062-1076178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1076410-1076543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078471-1078668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084200-1084437:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092880-1093020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1100144-1100298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1100542-1100674:1:exon

fabp2
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: fabp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1118671..1120667
location: region:1118671-1120667:1
so has part: feature:1118671-1120667:1:exon
subclass of: SO_0000010

112231678
type: Gene
SIO_000068: ncbigene

position:1118671:1
position: 1118671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120667:1
position: 1120667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118671-1120667:1:exon

fabp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: fabp2
product: fatty acid binding protein 2, intestinal
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398387.2
SIO_010081: fabp2
subclass of: SO_0000673
so part of: fabp2
location: join(1118671..1118826,1119231..1119403,1119939..1120046,1120384..1120667)
location: region:1118671-1120667:1
so has part: feature:1118671-1118826:1:exon
so has part: feature:1119231-1119403:1:exon
so has part: feature:1119939-1120046:1:exon
so has part: feature:1120384-1120667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1118671-1118826:1:exon

position:1118826:1
position: 1118826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1119231-1119403:1:exon

position:1119231:1
position: 1119231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119403:1
position: 1119403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1119939-1120046:1:exon

position:1119939:1
position: 1119939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120046:1
position: 1120046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1120384-1120667:1:exon

position:1120384:1
position: 1120384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fabp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: fabp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, intestinal
translation: MTYNGTWKVDRSENYEKFMEQMGVNMVKRKLAAHDNLKITLEQTGDKFVVKEASSFRTLDLEFTLGVTFEYALADGTMLSGSWGMEGDMMKGTFTRKDNGKVLTTTRAIVGEELVQSYSYDGVEAKRIFKRG
SIO_010081: fabp2
subclass of: SO_0000673
so part of: fabp2
location: join(1118760..1118826,1119231..1119403,1119939..1120046,1120384..1120434)
location: region:1118760-1120434:1
so has part: feature:1118760-1118826:1:exon
so has part: feature:1119231-1119403:1:exon
so has part: feature:1119939-1120046:1:exon
so has part: feature:1120384-1120434:1:exon

XP_024254155.1
type: Protein
SIO_000068: ncbiprotein

position:1118760:1
position: 1118760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120434:1
position: 1120434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118760-1118826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1119231-1119403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119939-1120046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120384-1120434:1:exon

usp53b
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: usp53b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1120855..1169971)
location: region:1120855-1169971:-1
so has part: feature:1120855-1169971:-1:exon
subclass of: SO_0000010

112231677
type: Gene
SIO_000068: ncbigene

position:1120855:-1
position: 1120855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169971:-1
position: 1169971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120855-1169971:-1:exon

usp53b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: usp53b
product: ubiquitin specific peptidase 53b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398386.2
SIO_010081: usp53b
subclass of: SO_0000673
so part of: usp53b
location: complement(join(1120855..1124916,1127837..1127925,1128209..1129092,1129223..1129301,1139327..1139391,1139777..1140590,1142346..1142468,1144267..1144377,1147978..1148146,1149481..1149630,1151655..1151801,1157728..1157833,1161026..1161108,1161761..1161874,1164057..1164191,1164614..1164706,1164963..1165132,1165392..1165582,1169424..1169971))
location: region:1120855-1169971:-1
so has part: feature:1169424-1169971:-1:exon
so has part: feature:1165392-1165582:-1:exon
so has part: feature:1164963-1165132:-1:exon
so has part: feature:1164614-1164706:-1:exon
so has part: feature:1164057-1164191:-1:exon
so has part: feature:1161761-1161874:-1:exon
so has part: feature:1161026-1161108:-1:exon
so has part: feature:1157728-1157833:-1:exon
so has part: feature:1151655-1151801:-1:exon
so has part: feature:1149481-1149630:-1:exon
so has part: feature:1147978-1148146:-1:exon
so has part: feature:1144267-1144377:-1:exon
so has part: feature:1142346-1142468:-1:exon
so has part: feature:1139777-1140590:-1:exon
so has part: feature:1139327-1139391:-1:exon
so has part: feature:1129223-1129301:-1:exon
so has part: feature:1128209-1129092:-1:exon
so has part: feature:1127837-1127925:-1:exon
so has part: feature:1120855-1124916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1169424-1169971:-1:exon

position:1169424:-1
position: 1169424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1165392-1165582:-1:exon

position:1165392:-1
position: 1165392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165582:-1
position: 1165582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1164963-1165132:-1:exon

position:1164963:-1
position: 1164963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165132:-1
position: 1165132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1164614-1164706:-1:exon

position:1164614:-1
position: 1164614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164706:-1
position: 1164706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1164057-1164191:-1:exon

position:1164057:-1
position: 1164057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164191:-1
position: 1164191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1161761-1161874:-1:exon

position:1161761:-1
position: 1161761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161874:-1
position: 1161874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1161026-1161108:-1:exon

position:1161026:-1
position: 1161026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161108:-1
position: 1161108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1157728-1157833:-1:exon

position:1157728:-1
position: 1157728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157833:-1
position: 1157833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1151655-1151801:-1:exon

position:1151655:-1
position: 1151655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151801:-1
position: 1151801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1149481-1149630:-1:exon

position:1149481:-1
position: 1149481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149630:-1
position: 1149630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1147978-1148146:-1:exon

position:1147978:-1
position: 1147978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148146:-1
position: 1148146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1144267-1144377:-1:exon

position:1144267:-1
position: 1144267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144377:-1
position: 1144377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1142346-1142468:-1:exon

position:1142346:-1
position: 1142346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142468:-1
position: 1142468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1139777-1140590:-1:exon

position:1139777:-1
position: 1139777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140590:-1
position: 1140590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1139327-1139391:-1:exon

position:1139327:-1
position: 1139327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139391:-1
position: 1139391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1129223-1129301:-1:exon

position:1129223:-1
position: 1129223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129301:-1
position: 1129301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1128209-1129092:-1:exon

position:1128209:-1
position: 1128209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129092:-1
position: 1129092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1127837-1127925:-1:exon

position:1127837:-1
position: 1127837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127925:-1
position: 1127925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1120855-1124916:-1:exon

position:1124916:-1
position: 1124916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

usp53b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: usp53b
product: ubiquitin specific peptidase 53b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398385.2
SIO_010081: usp53b
subclass of: SO_0000673
so part of: usp53b
location: complement(join(1120855..1124916,1127837..1127925,1128209..1129092,1129223..1129301,1139327..1139394,1139777..1140590,1142346..1142468,1144267..1144377,1147978..1148146,1149481..1149630,1151655..1151801,1157728..1157833,1161026..1161108,1161761..1161874,1164057..1164191,1164614..1164706,1164963..1165132,1165392..1165582,1169424..1169971))
location: region:1120855-1169971:-1
so has part: feature:1169424-1169971:-1:exon
so has part: feature:1165392-1165582:-1:exon
so has part: feature:1164963-1165132:-1:exon
so has part: feature:1164614-1164706:-1:exon
so has part: feature:1164057-1164191:-1:exon
so has part: feature:1161761-1161874:-1:exon
so has part: feature:1161026-1161108:-1:exon
so has part: feature:1157728-1157833:-1:exon
so has part: feature:1151655-1151801:-1:exon
so has part: feature:1149481-1149630:-1:exon
so has part: feature:1147978-1148146:-1:exon
so has part: feature:1144267-1144377:-1:exon
so has part: feature:1142346-1142468:-1:exon
so has part: feature:1139777-1140590:-1:exon
so has part: feature:1139327-1139394:-1:exon
so has part: feature:1129223-1129301:-1:exon
so has part: feature:1128209-1129092:-1:exon
so has part: feature:1127837-1127925:-1:exon
so has part: feature:1120855-1124916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1169424-1169971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1165392-1165582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164963-1165132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164614-1164706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164057-1164191:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1161761-1161874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1161026-1161108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1157728-1157833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151655-1151801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149481-1149630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1147978-1148146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1144267-1144377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1142346-1142468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1139777-1140590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1139327-1139394:-1:exon

position:1139394:-1
position: 1139394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1129223-1129301:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1128209-1129092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1127837-1127925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1120855-1124916:-1:exon

usp53b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: usp53b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X2
translation: MACQLPLPSMSSCGKPPPLSGEGSGSNSLAWVKLFKKPGGVGGGLGKSYQPGSMLSLALTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLPGHFCLGDACIFCALKSIFSQFQESRERALPSDSLRHALAETFKDEQRFQLGHMDDAAECFENILERIHLHIVSDTATEACTSKSCITHQKFAMTLYEQFVCRSCGASSDPLPFTELVHYVSTTALCQQVGHVLGKNDRLRSDMFGELLQAANTIGDLRNCPSNCGQSIKIRRVLLNCPEIVTIGFVWDAEQSDLTEDVVRSLGPHLNLSGLFNRVTDENAKRSELRLVGMICFSSKHYSAFAYHTKSSKWVFFDDATVKEIGSKWKDVASKCIRGHFQPLLLFYTNLEGTPVSSEDAPRQTTMCPRFKANINGEVPAGMKKLDAVREKAGPLRSNQGPYKQMLPPPSTSGYKRVKGPPASPNTFRDPSKETSQRVVEGIKKEAERGHRKLDPHKDMAYARSPSEGGLRPHADQRLRGGSGARADKLSSSHQNRASQDPRFQSGAPGGHSWRQETSPGRQEQDGSQDAWEKDGGSGAGRNKAKPSWRPIREVLNVDSVLNDLERRQQQQQHGGGGGSPRLSKPSCQERPHGSERDNRDWEKERERDKERERERLRIREERKQQKCLMTIYEDEQRQETESHSSLESEGRASGHGDQGGVGGGSRGGGRAKGGPKALLRSDTWTIQRTESGYESSDRLSSGSTNPDSPGVDSFAGKEQRLTPEVQSQRGQLHPNRCDSKPDAVHSSLYQGKHQLTTQGKNCDHQVSHLLKSSPSSRRKCRYSSGSSKKGAGLERDASSSDNRSSHMMGSPEMSNNNRGGHHGDSPAVRRLGKTSSSEWNSSDDLAGNLSEPEDSAYHSSNIKPPLSESPCPCPPHHLAFHQPPHIELEEPSSQHQPSMPSLPHPKAAQRASPHQGDVGRHCFRPRLLQEPSQTSPRPSVRPTPASHTPSPNQRSESNGPLQRPLSSASSKSGSDPERSNPSSGESEERLPICRPPGAESAVAQGVSLTTYFSVDNCMTDTYRLKYHHQRPLLLSAIMPKTPTEPAEHPSHHLHPANTHSMLDPPKTRPDAGHNSNKPTAKWNPVTAKGLDERGYL
SIO_010081: usp53b
subclass of: SO_0000673
so part of: usp53b
location: complement(join(1127849..1127925,1128209..1129092,1129223..1129301,1139327..1139391,1139777..1140590,1142346..1142468,1144267..1144377,1147978..1148146,1149481..1149630,1151655..1151801,1157728..1157833,1161026..1161108,1161761..1161874,1164057..1164191,1164614..1164706,1164963..1165132,1165392..1165458))
location: region:1127849-1165458:-1
so has part: feature:1165392-1165458:-1:exon
so has part: feature:1164963-1165132:-1:exon
so has part: feature:1164614-1164706:-1:exon
so has part: feature:1164057-1164191:-1:exon
so has part: feature:1161761-1161874:-1:exon
so has part: feature:1161026-1161108:-1:exon
so has part: feature:1157728-1157833:-1:exon
so has part: feature:1151655-1151801:-1:exon
so has part: feature:1149481-1149630:-1:exon
so has part: feature:1147978-1148146:-1:exon
so has part: feature:1144267-1144377:-1:exon
so has part: feature:1142346-1142468:-1:exon
so has part: feature:1139777-1140590:-1:exon
so has part: feature:1139327-1139391:-1:exon
so has part: feature:1129223-1129301:-1:exon
so has part: feature:1128209-1129092:-1:exon
so has part: feature:1127849-1127925:-1:exon

XP_024254154.1
type: Protein
SIO_000068: ncbiprotein

position:1127849:-1
position: 1127849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165458:-1
position: 1165458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165392-1165458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164963-1165132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164614-1164706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164057-1164191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161761-1161874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1161026-1161108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157728-1157833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151655-1151801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149481-1149630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1147978-1148146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1144267-1144377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1142346-1142468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1139777-1140590:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1139327-1139391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129223-1129301:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1128209-1129092:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127849-1127925:-1:exon

usp53b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: usp53b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1
translation: MACQLPLPSMSSCGKPPPLSGEGSGSNSLAWVKLFKKPGGVGGGLGKSYQPGSMLSLALTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLPGHFCLGDACIFCALKSIFSQFQESRERALPSDSLRHALAETFKDEQRFQLGHMDDAAECFENILERIHLHIVSDTATEACTSKSCITHQKFAMTLYEQFVCRSCGASSDPLPFTELVHYVSTTALCQQVGHVLGKNDRLRSDMFGELLQAANTIGDLRNCPSNCGQSIKIRRVLLNCPEIVTIGFVWDAEQSDLTEDVVRSLGPHLNLSGLFNRVTDENAKRSELRLVGMICFSSKHYSAFAYHTKSSKWVFFDDATVKEIGSKWKDVASKCIRGHFQPLLLFYTNLEGTPVSSEDAPRQTTMCPRFKANINGEVPAGMKKLDAVREKAGPLRSNQGPYKQMLPPPSTSGYKRVKGPPASPNTFRDPSKETSQRVVEGIKKEAERGHRKLDPHKDMAYARSPSEGGLRPHADQRLRGGSGARADKLSSSHQNRASQDPRFQSGAPGGHSWRQETSPGRQEQDGSQDAWEKDGGSGAGRNKAKPSWRPIREVLNVDSVLNDLERRQQQQQHGGGGGSPRLSKPSCQERPHGSERDNRDWEKERERDKERERERLRIREERKQQKCLMTIYEDEQRQETESHSSLESEGRASGHGDQGGVGGGSRGGGRAKGGPKALLRSDTWTIQRTESGYESSDRLSSGSTNPDSPGVDSFAGKEQRLTPEVQSQSRGQLHPNRCDSKPDAVHSSLYQGKHQLTTQGKNCDHQVSHLLKSSPSSRRKCRYSSGSSKKGAGLERDASSSDNRSSHMMGSPEMSNNNRGGHHGDSPAVRRLGKTSSSEWNSSDDLAGNLSEPEDSAYHSSNIKPPLSESPCPCPPHHLAFHQPPHIELEEPSSQHQPSMPSLPHPKAAQRASPHQGDVGRHCFRPRLLQEPSQTSPRPSVRPTPASHTPSPNQRSESNGPLQRPLSSASSKSGSDPERSNPSSGESEERLPICRPPGAESAVAQGVSLTTYFSVDNCMTDTYRLKYHHQRPLLLSAIMPKTPTEPAEHPSHHLHPANTHSMLDPPKTRPDAGHNSNKPTAKWNPVTAKGLDERGYL
SIO_010081: usp53b
subclass of: SO_0000673
so part of: usp53b
location: complement(join(1127849..1127925,1128209..1129092,1129223..1129301,1139327..1139394,1139777..1140590,1142346..1142468,1144267..1144377,1147978..1148146,1149481..1149630,1151655..1151801,1157728..1157833,1161026..1161108,1161761..1161874,1164057..1164191,1164614..1164706,1164963..1165132,1165392..1165458))
location: region:1127849-1165458:-1
so has part: feature:1165392-1165458:-1:exon
so has part: feature:1164963-1165132:-1:exon
so has part: feature:1164614-1164706:-1:exon
so has part: feature:1164057-1164191:-1:exon
so has part: feature:1161761-1161874:-1:exon
so has part: feature:1161026-1161108:-1:exon
so has part: feature:1157728-1157833:-1:exon
so has part: feature:1151655-1151801:-1:exon
so has part: feature:1149481-1149630:-1:exon
so has part: feature:1147978-1148146:-1:exon
so has part: feature:1144267-1144377:-1:exon
so has part: feature:1142346-1142468:-1:exon
so has part: feature:1139777-1140590:-1:exon
so has part: feature:1139327-1139394:-1:exon
so has part: feature:1129223-1129301:-1:exon
so has part: feature:1128209-1129092:-1:exon
so has part: feature:1127849-1127925:-1:exon

XP_024254153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1165392-1165458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164963-1165132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164614-1164706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164057-1164191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161761-1161874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1161026-1161108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157728-1157833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151655-1151801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149481-1149630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1147978-1148146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1144267-1144377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1142346-1142468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1139777-1140590:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1139327-1139394:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129223-1129301:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1128209-1129092:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127849-1127925:-1:exon

myoz2b
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: myoz2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1171614..1181287)
location: region:1171614-1181287:-1
so has part: feature:1171614-1181287:-1:exon
subclass of: SO_0000010

112231679
type: Gene
SIO_000068: ncbigene

position:1171614:-1
position: 1171614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181287:-1
position: 1181287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171614-1181287:-1:exon

myoz2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: myoz2b
product: myozenin 2b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398388.2
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1171614..1172330,1172732..1172915,1174351..1174453,1177939..1178105,1179735..1179857,1181134..1181287))
location: region:1171614-1181287:-1
so has part: feature:1181134-1181287:-1:exon
so has part: feature:1179735-1179857:-1:exon
so has part: feature:1177939-1178105:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1171614-1172330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181134-1181287:-1:exon

position:1181134:-1
position: 1181134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179735-1179857:-1:exon

position:1179735:-1
position: 1179735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179857:-1
position: 1179857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177939-1178105:-1:exon

position:1177939:-1
position: 1177939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178105:-1
position: 1178105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174351-1174453:-1:exon

position:1174351:-1
position: 1174351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174453:-1
position: 1174453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1172732-1172915:-1:exon

position:1172732:-1
position: 1172732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172915:-1
position: 1172915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1171614-1172330:-1:exon

position:1172330:-1
position: 1172330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

myoz2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: myoz2b
product: myozenin 2b, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398390.2
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1171614..1172330,1172732..1172915,1174351..1174453,1177939..1178105,1181134..1181277))
location: region:1171614-1181277:-1
so has part: feature:1181134-1181277:-1:exon
so has part: feature:1177939-1178105:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1171614-1172330:-1:exon

position:1181277:-1
position: 1181277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181134-1181277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177939-1178105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174351-1174453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1172732-1172915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1171614-1172330:-1:exon

myoz2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: myoz2b
product: myozenin 2b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398389.2
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1171614..1172330,1172732..1172915,1174351..1174453,1177939..1178105,1179735..1179857,1181092..1181275))
location: region:1171614-1181275:-1
so has part: feature:1181092-1181275:-1:exon
so has part: feature:1179735-1179857:-1:exon
so has part: feature:1177939-1178105:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1171614-1172330:-1:exon

position:1181275:-1
position: 1181275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181092-1181275:-1:exon

position:1181092:-1
position: 1181092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179735-1179857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177939-1178105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174351-1174453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1172732-1172915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1171614-1172330:-1:exon

myoz2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: myoz2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-2b isoform X1
translation: MSQFCTMPAGERKMHAAAISREVHGANGDTMDLGIKVSTPKDIMLEELSLQSNRGSRLFKMRQRRSEKYTFESIQNEANVQLSSDLLAENADSAENKEGSKTLPYTPTPGNPESIAPGYGGPLKDVPAETFNSTAIPKSYHSPWEQAIINDPNLAATLNIRMPVPEPRPEAPDYKSFNRVATPFGGFDKAPRSSGITFKLPEIDLNLHNYSELQDPGVKRPTFNRVAQGWISDGIPLILPTVPLEPMPIPESDDL
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1172099..1172330,1172732..1172915,1174351..1174453,1177939..1178105,1179735..1179816))
location: region:1172099-1179816:-1
so has part: feature:1179735-1179816:-1:exon
so has part: feature:1177939-1178105:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1172099-1172330:-1:exon

XP_024254156.1
type: Protein
SIO_000068: ncbiprotein

position:1172099:-1
position: 1172099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179816:-1
position: 1179816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179735-1179816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177939-1178105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174351-1174453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1172732-1172915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1172099-1172330:-1:exon

myoz2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: myoz2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-2b isoform X1
translation: MSQFCTMPAGERKMHAAAISREVHGANGDTMDLGIKVSTPKDIMLEELSLQSNRGSRLFKMRQRRSEKYTFESIQNEANVQLSSDLLAENADSAENKEGSKTLPYTPTPGNPESIAPGYGGPLKDVPAETFNSTAIPKSYHSPWEQAIINDPNLAATLNIRMPVPEPRPEAPDYKSFNRVATPFGGFDKAPRSSGITFKLPEIDLNLHNYSELQDPGVKRPTFNRVAQGWISDGIPLILPTVPLEPMPIPESDDL
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1172099..1172330,1172732..1172915,1174351..1174453,1177939..1178105,1179735..1179816))
location: region:1172099-1179816:-1
so has part: feature:1179735-1179816:-1:exon
so has part: feature:1177939-1178105:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1172099-1172330:-1:exon

XP_024254157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1179735-1179816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177939-1178105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174351-1174453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1172732-1172915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1172099-1172330:-1:exon

myoz2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: myoz2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-2b isoform X2
translation: MDLGIKVSTPKDIMLEELSLQSNRGSRLFKMRQRRSEKYTFESIQNEANVQLSSDLLAENADSAENKEGSKTLPYTPTPGNPESIAPGYGGPLKDVPAETFNSTAIPKSYHSPWEQAIINDPNLAATLNIRMPVPEPRPEAPDYKSFNRVATPFGGFDKAPRSSGITFKLPEIDLNLHNYSELQDPGVKRPTFNRVAQGWISDGIPLILPTVPLEPMPIPESDDL
SIO_010081: myoz2b
subclass of: SO_0000673
so part of: myoz2b
location: complement(join(1172099..1172330,1172732..1172915,1174351..1174453,1177939..1178097))
location: region:1172099-1178097:-1
so has part: feature:1177939-1178097:-1:exon
so has part: feature:1174351-1174453:-1:exon
so has part: feature:1172732-1172915:-1:exon
so has part: feature:1172099-1172330:-1:exon

XP_024254158.1
type: Protein
SIO_000068: ncbiprotein

position:1178097:-1
position: 1178097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177939-1178097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174351-1174453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1172732-1172915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1172099-1172330:-1:exon

LOC112231577
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1184899..1197205)
location: region:1184899-1197205:-1
so has part: feature:1184899-1197205:-1:exon
subclass of: SO_0000010

112231577
type: Gene
SIO_000068: ncbigene

position:1184899:-1
position: 1184899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197205:-1
position: 1197205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184899-1197205:-1:exon

LOC112231577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231577
product: synaptopodin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_024398275.1
SIO_010081: LOC112231577
subclass of: SO_0000673
so part of: LOC112231577
location: complement(join(1184899..1186852,1190183..1192383,1196464..1197205))
location: region:1184899-1197205:-1
so has part: feature:1196464-1197205:-1:exon
so has part: feature:1190183-1192383:-1:exon
so has part: feature:1184899-1186852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196464-1197205:-1:exon

position:1196464:-1
position: 1196464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190183-1192383:-1:exon

position:1190183:-1
position: 1190183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192383:-1
position: 1192383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1184899-1186852:-1:exon

position:1186852:-1
position: 1186852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptopodin-2
translation: MEPETEDQESTVMDSWSVSEYGHSSDDLYISESRDGFYYEERKSDTELPIDPQHTHIRQAESPHSVESPEPYTKKAMVEHQRPPSNYSPEERSLVRGLSPSRSQEIDTLSQGPGSVYPGESLSSDAESYPSTPSPIPPKSPQAPTPNPNLCQMSRQRSSSSSSVGRSEMTLTLTHGQPRGDGRRLGSGTGARGNGSVESLEEGGHSEAPPAHLSFGISAQGAEQAEQWNSASERDLPSPSRHRVRRARPRQSESQSDRQVKEAKSKCKRIALLLTDAPNPRNRGVLMFKKRRQRVKKYTLVSYGTGQHQFDDQSGKDEESEYGKTVRFTLATNDYSELDEDYTVNVRDRDVNLNWENLGIANIFHHLEEMEQLPETKGKGVAMFVQRRQRMDEIALEHEEMRRKGLPVKGIVELEDTEMYKSYKTDETYVQSNQIQYSERHADQIYMDGHGNQHLQYKENQQEMQQYAHMMNSMPNLLASAIPKPLVPNRTAKPFLGSQNRLPVPFSPLSGVTSPVKHHELKFKVSVPIHTVPQVWSPTGDFIASRDERISVPAIKTGILPDSKRRGANRAASDQPSNAYIQNRGERRSYIESGEEEDYFSLGAEACNFMQPRTVKHKNPPPVAPKPSINPVCPPWLKESPSNVLLHLARSPIPASFPNPVGSSPQQYFKQQDWLSPQQTANPREPPQTQSRPQPPMNTRAPANSTSPSQLHPTMNSWSPQPPRSPVSIQAPNPTHTAPRQATVSKNKSPNPSVASCPPQRGSSYSHAAKAPPTSSMGHISEGHVSPAINGPTLRGRGAELFAKRQTRMEKFVVDAETVQANKAKCPSPTASLPGAWRYSSNIRAPPPLSYNPLHAPFYPPAAAKHPYSTSPKIKPKTTVKTKPQPSKHLDALDVMKHQPYQLDSSLFRYNVGTEAEGLSPSLKTAPIQTPESNPTLSPKPAPVVSPRPAFTISPYSYPGHDLPPAKQQSKPIAPAKSTRSGLGRSYSLSLPRRMCSMSYMPSQSSMSPVTTPVFHPSLGRQTSWQEKAALKPPSPWEAASRSPLGLVDDAFRFQNFPQSIATNVNSTANRRSLPEPPDEWKRKVSLDAPCVSGGYYHAPPPAMHTRSMSMTSAPVYGPPFRQAQPLWSAVSASAGHMGRGPGHPSQSLYATLPRTAMRR
SIO_010081: LOC112231577
subclass of: SO_0000673
so part of: LOC112231577
location: complement(join(1186313..1186852,1190183..1192383,1196464..1197205))
location: region:1186313-1197205:-1
so has part: feature:1196464-1197205:-1:exon
so has part: feature:1190183-1192383:-1:exon
so has part: feature:1186313-1186852:-1:exon

XP_024254043.1
type: Protein
SIO_000068: ncbiprotein

position:1186313:-1
position: 1186313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196464-1197205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190183-1192383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1186313-1186852:-1:exon

enam
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: enam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1225100..1227596)
location: region:1225100-1227596:-1
so has part: feature:1225100-1227596:-1:exon
subclass of: SO_0000010

112231549
type: Gene
SIO_000068: ncbigene

position:1225100:-1
position: 1225100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227596:-1
position: 1227596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225100-1227596:-1:exon

enam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: enam
product: enamelin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398250.2
SIO_010081: enam
subclass of: SO_0000673
so part of: enam
location: complement(join(1225100..1225770,1225957..1226052,1226255..1226278,1226439..1226510,1226657..1226680,1226833..1226893,1227483..1227596))
location: region:1225100-1227596:-1
so has part: feature:1227483-1227596:-1:exon
so has part: feature:1226833-1226893:-1:exon
so has part: feature:1226657-1226680:-1:exon
so has part: feature:1226439-1226510:-1:exon
so has part: feature:1226255-1226278:-1:exon
so has part: feature:1225957-1226052:-1:exon
so has part: feature:1225100-1225770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227483-1227596:-1:exon

position:1227483:-1
position: 1227483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226833-1226893:-1:exon

position:1226833:-1
position: 1226833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226893:-1
position: 1226893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1226657-1226680:-1:exon

position:1226657:-1
position: 1226657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226680:-1
position: 1226680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1226439-1226510:-1:exon

position:1226439:-1
position: 1226439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226510:-1
position: 1226510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1226255-1226278:-1:exon

position:1226255:-1
position: 1226255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226278:-1
position: 1226278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1225957-1226052:-1:exon

position:1225957:-1
position: 1225957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226052:-1
position: 1226052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1225100-1225770:-1:exon

position:1225770:-1
position: 1225770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

enam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: enam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enamelin
translation: MISVVLLMCLLGFSLAAPTPDSGSDEVAAHANEALRWMELYRMYGSLGQLAAPAQPPMLNAPAAAPAAPAQDPKFFYPPPPMNSDEEAPVPRYGSYGRYYPYPGLAAPAAPAVPLNSDEVGEDETATEAEAEPAVDHAAEEPAVVDTAAPVDPADAAPVDPAVDVPIDVVIPAAIDIPATVATDIIVVDPALIAPIDTIVVAGPLDPTLPVM
SIO_010081: enam
subclass of: SO_0000673
so part of: enam
location: complement(join(1225402..1225770,1225957..1226052,1226255..1226278,1226439..1226510,1226657..1226680,1226833..1226886))
location: region:1225402-1226886:-1
so has part: feature:1226833-1226886:-1:exon
so has part: feature:1226657-1226680:-1:exon
so has part: feature:1226439-1226510:-1:exon
so has part: feature:1226255-1226278:-1:exon
so has part: feature:1225957-1226052:-1:exon
so has part: feature:1225402-1225770:-1:exon

XP_024254018.1
type: Protein
SIO_000068: ncbiprotein

position:1225402:-1
position: 1225402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226886:-1
position: 1226886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226833-1226886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226657-1226680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1226439-1226510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226255-1226278:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225957-1226052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1225402-1225770:-1:exon

LOC121841829
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1236333..1240983)
location: region:1236333-1240983:-1
so has part: feature:1236333-1240983:-1:exon
subclass of: SO_0000010

121841829
type: Gene
SIO_000068: ncbigene

position:1236333:-1
position: 1236333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240983:-1
position: 1240983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236333-1240983:-1:exon

LOC121841829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841829
product: gamma-gliadin-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312144.1
SIO_010081: LOC121841829
subclass of: SO_0000673
so part of: LOC121841829
location: complement(join(1236333..1236664,1236755..1236789,1237034..1237159,1237909..1237959,1238085..1238123,1238773..1238802,1239130..1239201,1239315..1239368,1239658..1239732,1239907..1239972,1240411..1240478,1240879..1240983))
location: region:1236333-1240983:-1
so has part: feature:1240879-1240983:-1:exon
so has part: feature:1240411-1240478:-1:exon
so has part: feature:1239907-1239972:-1:exon
so has part: feature:1239658-1239732:-1:exon
so has part: feature:1239315-1239368:-1:exon
so has part: feature:1239130-1239201:-1:exon
so has part: feature:1238773-1238802:-1:exon
so has part: feature:1238085-1238123:-1:exon
so has part: feature:1237909-1237959:-1:exon
so has part: feature:1237034-1237159:-1:exon
so has part: feature:1236755-1236789:-1:exon
so has part: feature:1236333-1236664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240879-1240983:-1:exon

position:1240879:-1
position: 1240879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240411-1240478:-1:exon

position:1240411:-1
position: 1240411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240478:-1
position: 1240478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1239907-1239972:-1:exon

position:1239907:-1
position: 1239907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239972:-1
position: 1239972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1239658-1239732:-1:exon

position:1239658:-1
position: 1239658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239732:-1
position: 1239732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1239315-1239368:-1:exon

position:1239315:-1
position: 1239315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239368:-1
position: 1239368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1239130-1239201:-1:exon

position:1239130:-1
position: 1239130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239201:-1
position: 1239201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1238773-1238802:-1:exon

position:1238773:-1
position: 1238773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238802:-1
position: 1238802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1238085-1238123:-1:exon

position:1238085:-1
position: 1238085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238123:-1
position: 1238123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1237909-1237959:-1:exon

position:1237909:-1
position: 1237909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237959:-1
position: 1237959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1237034-1237159:-1:exon

position:1237034:-1
position: 1237034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237159:-1
position: 1237159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1236755-1236789:-1:exon

position:1236755:-1
position: 1236755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236789:-1
position: 1236789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1236333-1236664:-1:exon

position:1236664:-1
position: 1236664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-gliadin-like
translation: MKITIMCLCLASSISAAPRQPFFNYLPHYGDPRQSGPPTQVNEGLYPAGHPYPQPGLNGPVSMEIVFPQRFPGWSTGGQINGPQSYPSQAFIKYSLPEAPGRKSVEIYYPYDFVQQKMMPNIPQMPQIPNLFQYEYQPQTVPQQRPNIPFPPYNSQLPHSQDPLQPAEQEQPLQTGHVGKLELYLS
SIO_010081: LOC121841829
subclass of: SO_0000673
so part of: LOC121841829
location: complement(join(1237040..1237159,1237909..1237959,1238085..1238123,1238773..1238802,1239130..1239201,1239315..1239368,1239658..1239732,1239907..1239972,1240411..1240464))
location: region:1237040-1240464:-1
so has part: feature:1240411-1240464:-1:exon
so has part: feature:1239907-1239972:-1:exon
so has part: feature:1239658-1239732:-1:exon
so has part: feature:1239315-1239368:-1:exon
so has part: feature:1239130-1239201:-1:exon
so has part: feature:1238773-1238802:-1:exon
so has part: feature:1238085-1238123:-1:exon
so has part: feature:1237909-1237959:-1:exon
so has part: feature:1237040-1237159:-1:exon

XP_042168078.1
type: Protein
SIO_000068: ncbiprotein

position:1237040:-1
position: 1237040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240464:-1
position: 1240464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240411-1240464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239907-1239972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239658-1239732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239315-1239368:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1239130-1239201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238773-1238802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1238085-1238123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1237909-1237959:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237040-1237159:-1:exon

LOC112239125
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112239125
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1248922..1253943)
location: region:1248922-1253943:-1
so has part: feature:1248922-1253943:-1:exon
subclass of: SO_0000010

112239125
type: Gene
SIO_000068: ncbigene

position:1248922:-1
position: 1248922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253943:-1
position: 1253943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248922-1253943:-1:exon

LOC112239125
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112239125
product: AT-rich interactive domain-containing protein 1A-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312145.1
SIO_010081: LOC112239125
subclass of: SO_0000673
so part of: LOC112239125
location: complement(join(1248922..1249521,1249612..1249646,1249919..1249996,1250727..1250777,1250881..1250919,1251726..1251755,1252089..1252160,1252265..1252318,1252581..1252655,1252827..1252892,1253385..1253452,1253872..1253943))
location: region:1248922-1253943:-1
so has part: feature:1253872-1253943:-1:exon
so has part: feature:1253385-1253452:-1:exon
so has part: feature:1252827-1252892:-1:exon
so has part: feature:1252581-1252655:-1:exon
so has part: feature:1252265-1252318:-1:exon
so has part: feature:1252089-1252160:-1:exon
so has part: feature:1251726-1251755:-1:exon
so has part: feature:1250881-1250919:-1:exon
so has part: feature:1250727-1250777:-1:exon
so has part: feature:1249919-1249996:-1:exon
so has part: feature:1249612-1249646:-1:exon
so has part: feature:1248922-1249521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253872-1253943:-1:exon

position:1253872:-1
position: 1253872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1253385-1253452:-1:exon

position:1253385:-1
position: 1253385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253452:-1
position: 1253452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1252827-1252892:-1:exon

position:1252827:-1
position: 1252827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252892:-1
position: 1252892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1252581-1252655:-1:exon

position:1252581:-1
position: 1252581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252655:-1
position: 1252655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1252265-1252318:-1:exon

position:1252265:-1
position: 1252265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252318:-1
position: 1252318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1252089-1252160:-1:exon

position:1252089:-1
position: 1252089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252160:-1
position: 1252160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1251726-1251755:-1:exon

position:1251726:-1
position: 1251726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251755:-1
position: 1251755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1250881-1250919:-1:exon

position:1250881:-1
position: 1250881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250919:-1
position: 1250919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1250727-1250777:-1:exon

position:1250727:-1
position: 1250727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250777:-1
position: 1250777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1249919-1249996:-1:exon

position:1249919:-1
position: 1249919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249996:-1
position: 1249996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1249612-1249646:-1:exon

position:1249612:-1
position: 1249612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249646:-1
position: 1249646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1248922-1249521:-1:exon

position:1249521:-1
position: 1249521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112239125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112239125
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A-like
translation: MKITIMCLCLASSISAAPRQHYFNYMPHYGDPRQSGPPTQVNEGLYPAGQPYPQPGLNGPVSMEIVFPQRFPGWSTGGQINGPQSYPSQAFIKYSLPKAPGRKSVEIYYPYDFVQQKMMPNIPQMPQIPNLFPNEYQPQTVPQQRPNIQFPPNSQLPHSQDPLQPAQQEQTGQVPHVQP
SIO_010081: LOC112239125
subclass of: SO_0000673
so part of: LOC112239125
location: complement(join(1249626..1249646,1249919..1249996,1250727..1250777,1250881..1250919,1251726..1251755,1252089..1252160,1252265..1252318,1252581..1252655,1252827..1252892,1253385..1253438))
location: region:1249626-1253438:-1
so has part: feature:1253385-1253438:-1:exon
so has part: feature:1252827-1252892:-1:exon
so has part: feature:1252581-1252655:-1:exon
so has part: feature:1252265-1252318:-1:exon
so has part: feature:1252089-1252160:-1:exon
so has part: feature:1251726-1251755:-1:exon
so has part: feature:1250881-1250919:-1:exon
so has part: feature:1250727-1250777:-1:exon
so has part: feature:1249919-1249996:-1:exon
so has part: feature:1249626-1249646:-1:exon

XP_042168079.1
type: Protein
SIO_000068: ncbiprotein

position:1249626:-1
position: 1249626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253438:-1
position: 1253438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253385-1253438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1252827-1252892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252581-1252655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252265-1252318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252089-1252160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1251726-1251755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1250881-1250919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250727-1250777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249919-1249996:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1249626-1249646:-1:exon

LOC112231682
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1265579..1266286)
location: region:1265579-1266286:-1
so has part: feature:1265579-1266286:-1:exon
subclass of: SO_0000011

112231682
type: Gene
SIO_000068: ncbigene

position:1265579:-1
position: 1265579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266286:-1
position: 1266286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265579-1266286:-1:exon

LOC112231682
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC112231682
product: uncharacterized LOC112231682
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002950499.1
SIO_010081: LOC112231682
subclass of: SO_0000673
so part of: LOC112231682
location: complement(join(1265579..1265617,1265914..1265958,1266228..1266286))
location: region:1265579-1266286:-1
so has part: feature:1266228-1266286:-1:exon
so has part: feature:1265914-1265958:-1:exon
so has part: feature:1265579-1265617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266228-1266286:-1:exon

position:1266228:-1
position: 1266228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265914-1265958:-1:exon

position:1265914:-1
position: 1265914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265958:-1
position: 1265958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265579-1265617:-1:exon

position:1265617:-1
position: 1265617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112243025
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112243025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1272158..1277676)
location: region:1272158-1277676:-1
so has part: feature:1272158-1277676:-1:exon
subclass of: SO_0000010

112243025
type: Gene
SIO_000068: ncbigene

position:1272158:-1
position: 1272158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277676:-1
position: 1277676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1272158-1277676:-1:exon

LOC112243025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112243025
product: gamma-gliadin-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312141.1
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272158..1272489,1272580..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275848,1275953..1276006,1276296..1276370,1276541..1276606,1277106..1277173,1277593..1277676))
location: region:1272158-1277676:-1
so has part: feature:1277593-1277676:-1:exon
so has part: feature:1277106-1277173:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275848:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272580-1272614:-1:exon
so has part: feature:1272158-1272489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1277593-1277676:-1:exon

position:1277593:-1
position: 1277593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277106-1277173:-1:exon

position:1277106:-1
position: 1277106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277173:-1
position: 1277173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1276541-1276606:-1:exon

position:1276541:-1
position: 1276541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276606:-1
position: 1276606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1276296-1276370:-1:exon

position:1276296:-1
position: 1276296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276370:-1
position: 1276370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1275953-1276006:-1:exon

position:1275953:-1
position: 1275953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276006:-1
position: 1276006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1275777-1275848:-1:exon

position:1275777:-1
position: 1275777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275848:-1
position: 1275848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1275417-1275446:-1:exon

position:1275417:-1
position: 1275417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275446:-1
position: 1275446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1273808-1273846:-1:exon

position:1273808:-1
position: 1273808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273846:-1
position: 1273846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1273676-1273726:-1:exon

position:1273676:-1
position: 1273676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273726:-1
position: 1273726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1272852-1272941:-1:exon

position:1272852:-1
position: 1272852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272941:-1
position: 1272941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1272580-1272614:-1:exon

position:1272580:-1
position: 1272580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272614:-1
position: 1272614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1272158-1272489:-1:exon

position:1272489:-1
position: 1272489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112243025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112243025
product: gamma-gliadin-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312140.1
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272158..1272489,1272580..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275845,1275953..1276006,1276296..1276370,1276541..1276606,1277088..1277173,1277593..1277676))
location: region:1272158-1277676:-1
so has part: feature:1277593-1277676:-1:exon
so has part: feature:1277088-1277173:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275845:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272580-1272614:-1:exon
so has part: feature:1272158-1272489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1277593-1277676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277088-1277173:-1:exon

position:1277088:-1
position: 1277088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1276541-1276606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276296-1276370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275953-1276006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275777-1275845:-1:exon

position:1275845:-1
position: 1275845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1275417-1275446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273808-1273846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273676-1273726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272852-1272941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1272580-1272614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1272158-1272489:-1:exon

LOC112243025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112243025
product: gamma-gliadin-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312139.1
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272158..1272489,1272580..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275848,1275953..1276006,1276296..1276370,1276541..1276606,1277088..1277173,1277593..1277676))
location: region:1272158-1277676:-1
so has part: feature:1277593-1277676:-1:exon
so has part: feature:1277088-1277173:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275848:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272580-1272614:-1:exon
so has part: feature:1272158-1272489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1277593-1277676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277088-1277173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1276541-1276606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276296-1276370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275953-1276006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275777-1275848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275417-1275446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273808-1273846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273676-1273726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272852-1272941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1272580-1272614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1272158-1272489:-1:exon

LOC112243025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112243025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-gliadin-like isoform X3
translation: MKITIMCLCLASSISAAPRQHYFNYMPHYGDPRQSGPPTQVNEGLYPAGQPYPQPGLNGPVSMEIVFPQRFPGWSTGGQINGPQSYPSQAFIKYSLPKAPGRKSVEIYYPYDFVQQKMMPNIPQMPQIPNLFPNEYQPQTVPQQRPNIPFPPYNSQLPHSQDPLQPAQQEQTVQTGQVPHVQP
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272594..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275848,1275953..1276006,1276296..1276370,1276541..1276606,1277106..1277159))
location: region:1272594-1277159:-1
so has part: feature:1277106-1277159:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275848:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272594-1272614:-1:exon

XP_042168075.1
type: Protein
SIO_000068: ncbiprotein

position:1272594:-1
position: 1272594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277159:-1
position: 1277159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277106-1277159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1276541-1276606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1276296-1276370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275953-1276006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275777-1275848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275417-1275446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273808-1273846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273676-1273726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272852-1272941:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272594-1272614:-1:exon

LOC112243025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112243025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-gliadin-like isoform X2
translation: MKITIMCLCLASSISAAPVSLKTQRQHYFNYMPHYGDPRQSGPPTQVNEGLYPAGQPYPQPGLNGPVSMEIVFPQRFPGWSTGGQINGPSYPSQAFIKYSLPKAPGRKSVEIYYPYDFVQQKMMPNIPQMPQIPNLFPNEYQPQTVPQQRPNIPFPPYNSQLPHSQDPLQPAQQEQTVQTGQVPHVQP
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272594..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275845,1275953..1276006,1276296..1276370,1276541..1276606,1277088..1277159))
location: region:1272594-1277159:-1
so has part: feature:1277088-1277159:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275845:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272594-1272614:-1:exon

XP_042168074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277088-1277159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1276541-1276606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1276296-1276370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275953-1276006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275777-1275845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275417-1275446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273808-1273846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273676-1273726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272852-1272941:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272594-1272614:-1:exon

LOC112243025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112243025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-gliadin-like isoform X1
translation: MKITIMCLCLASSISAAPVSLKTQRQHYFNYMPHYGDPRQSGPPTQVNEGLYPAGQPYPQPGLNGPVSMEIVFPQRFPGWSTGGQINGPQSYPSQAFIKYSLPKAPGRKSVEIYYPYDFVQQKMMPNIPQMPQIPNLFPNEYQPQTVPQQRPNIPFPPYNSQLPHSQDPLQPAQQEQTVQTGQVPHVQP
SIO_010081: LOC112243025
subclass of: SO_0000673
so part of: LOC112243025
location: complement(join(1272594..1272614,1272852..1272941,1273676..1273726,1273808..1273846,1275417..1275446,1275777..1275848,1275953..1276006,1276296..1276370,1276541..1276606,1277088..1277159))
location: region:1272594-1277159:-1
so has part: feature:1277088-1277159:-1:exon
so has part: feature:1276541-1276606:-1:exon
so has part: feature:1276296-1276370:-1:exon
so has part: feature:1275953-1276006:-1:exon
so has part: feature:1275777-1275848:-1:exon
so has part: feature:1275417-1275446:-1:exon
so has part: feature:1273808-1273846:-1:exon
so has part: feature:1273676-1273726:-1:exon
so has part: feature:1272852-1272941:-1:exon
so has part: feature:1272594-1272614:-1:exon

XP_042168073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277088-1277159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1276541-1276606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1276296-1276370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275953-1276006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275777-1275848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275417-1275446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273808-1273846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273676-1273726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272852-1272941:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272594-1272614:-1:exon

scpp7
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: scpp7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1291128..1294032)
location: region:1291128-1294032:-1
so has part: feature:1291128-1294032:-1:exon
subclass of: SO_0000010

121841759
type: Gene
SIO_000068: ncbigene

position:1291128:-1
position: 1291128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294032:-1
position: 1294032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291128-1294032:-1:exon

scpp7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: scpp7
product: secretory calcium-binding phosphoprotein 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311772.1
SIO_010081: scpp7
subclass of: SO_0000673
so part of: scpp7
location: complement(join(1291128..1291365,1291700..1291733,1292136..1292195,1292510..1292569,1292743..1292769,1292882..1292920,1293214..1293258,1293686..1293750,1293888..1294032))
location: region:1291128-1294032:-1
so has part: feature:1293888-1294032:-1:exon
so has part: feature:1293686-1293750:-1:exon
so has part: feature:1293214-1293258:-1:exon
so has part: feature:1292882-1292920:-1:exon
so has part: feature:1292743-1292769:-1:exon
so has part: feature:1292510-1292569:-1:exon
so has part: feature:1292136-1292195:-1:exon
so has part: feature:1291700-1291733:-1:exon
so has part: feature:1291128-1291365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293888-1294032:-1:exon

position:1293888:-1
position: 1293888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1293686-1293750:-1:exon

position:1293686:-1
position: 1293686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293750:-1
position: 1293750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293214-1293258:-1:exon

position:1293214:-1
position: 1293214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293258:-1
position: 1293258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292882-1292920:-1:exon

position:1292882:-1
position: 1292882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292920:-1
position: 1292920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1292743-1292769:-1:exon

position:1292743:-1
position: 1292743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292769:-1
position: 1292769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1292510-1292569:-1:exon

position:1292510:-1
position: 1292510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292569:-1
position: 1292569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292136-1292195:-1:exon

position:1292136:-1
position: 1292136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292195:-1
position: 1292195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1291700-1291733:-1:exon

position:1291700:-1
position: 1291700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291733:-1
position: 1291733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1291128-1291365:-1:exon

position:1291365:-1
position: 1291365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

scpp7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: scpp7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory calcium-binding phosphoprotein 7
translation: MAWLVTKSSSEVGPPFAFGENKKEQISPSDIISFFSNPLILLWSCTTKESFKMKTFILIACILGTALGRPQRLVMEFDFQAANAQALQAGQARPDLEIILPVGGGVPSGGFIKQEIPQPLGQESVEIYHPFSIQVAPPPPAPAAPAHTHTSDEEDD
SIO_010081: scpp7
subclass of: SO_0000673
so part of: scpp7
location: complement(join(1291704..1291733,1292136..1292195,1292510..1292569,1292743..1292769,1292882..1292920,1293214..1293258,1293686..1293750,1293888..1294032))
location: region:1291704-1294032:-1
so has part: feature:1293888-1294032:-1:exon
so has part: feature:1293686-1293750:-1:exon
so has part: feature:1293214-1293258:-1:exon
so has part: feature:1292882-1292920:-1:exon
so has part: feature:1292743-1292769:-1:exon
so has part: feature:1292510-1292569:-1:exon
so has part: feature:1292136-1292195:-1:exon
so has part: feature:1291704-1291733:-1:exon

XP_042167706.1
type: Protein
SIO_000068: ncbiprotein

position:1291704:-1
position: 1291704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293888-1294032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293686-1293750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293214-1293258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292882-1292920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292743-1292769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292510-1292569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292136-1292195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1291704-1291733:-1:exon

LOC112231683
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1310817..1314223)
location: region:1310817-1314223:-1
so has part: feature:1310817-1314223:-1:exon
subclass of: SO_0000011

112231683
type: Gene
SIO_000068: ncbigene

position:1310817:-1
position: 1310817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314223:-1
position: 1314223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310817-1314223:-1:exon

LOC112231683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC112231683
product: uncharacterized LOC112231683
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_002950500.1
SIO_010081: LOC112231683
subclass of: SO_0000673
so part of: LOC112231683
location: complement(join(1310817..1312672,1312809..1312853,1313021..1313092,1313475..1313607,1314052..1314223))
location: region:1310817-1314223:-1
so has part: feature:1314052-1314223:-1:exon
so has part: feature:1313475-1313607:-1:exon
so has part: feature:1313021-1313092:-1:exon
so has part: feature:1312809-1312853:-1:exon
so has part: feature:1310817-1312672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1314052-1314223:-1:exon

position:1314052:-1
position: 1314052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313475-1313607:-1:exon

position:1313475:-1
position: 1313475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313607:-1
position: 1313607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1313021-1313092:-1:exon

position:1313021:-1
position: 1313021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313092:-1
position: 1313092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1312809-1312853:-1:exon

position:1312809:-1
position: 1312809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312853:-1
position: 1312853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1310817-1312672:-1:exon

position:1312672:-1
position: 1312672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841830
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1318011..1319156)
location: region:1318011-1319156:-1
so has part: feature:1318011-1319156:-1:exon
subclass of: SO_0000011

121841830
type: Gene
SIO_000068: ncbigene

position:1318011:-1
position: 1318011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319156:-1
position: 1319156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318011-1319156:-1:exon

LOC121841830
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841830
product: uncharacterized LOC121841830
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006080782.1
SIO_010081: LOC121841830
subclass of: SO_0000673
so part of: LOC121841830
location: complement(join(1318011..1318368,1318670..1318714,1318919..1318987,1319071..1319156))
location: region:1318011-1319156:-1
so has part: feature:1319071-1319156:-1:exon
so has part: feature:1318919-1318987:-1:exon
so has part: feature:1318670-1318714:-1:exon
so has part: feature:1318011-1318368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1319071-1319156:-1:exon

position:1319071:-1
position: 1319071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1318919-1318987:-1:exon

position:1318919:-1
position: 1318919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318987:-1
position: 1318987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1318670-1318714:-1:exon

position:1318670:-1
position: 1318670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318714:-1
position: 1318714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1318011-1318368:-1:exon

position:1318368:-1
position: 1318368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841831
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1340589..1341090)
location: region:1340589-1341090:-1
so has part: feature:1340589-1341090:-1:exon
subclass of: SO_0000011

121841831
type: Gene
SIO_000068: ncbigene

position:1340589:-1
position: 1340589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341090:-1
position: 1341090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340589-1341090:-1:exon

LOC121841831
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC121841831
product: uncharacterized LOC121841831
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_006080783.1
SIO_010081: LOC121841831
subclass of: SO_0000673
so part of: LOC121841831
location: complement(join(1340589..1340657,1340797..1340841,1341042..1341090))
location: region:1340589-1341090:-1
so has part: feature:1341042-1341090:-1:exon
so has part: feature:1340797-1340841:-1:exon
so has part: feature:1340589-1340657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341042-1341090:-1:exon

position:1341042:-1
position: 1341042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340797-1340841:-1:exon

position:1340797:-1
position: 1340797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340841:-1
position: 1340841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340589-1340657:-1:exon

position:1340657:-1
position: 1340657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231689
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1353897..1354863)
location: region:1353897-1354863:-1
so has part: feature:1353897-1354863:-1:exon
subclass of: SO_0000011

112231689
type: Gene
SIO_000068: ncbigene

position:1353897:-1
position: 1353897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354863:-1
position: 1354863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353897-1354863:-1:exon

LOC112231689
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC112231689
product: uncharacterized LOC112231689
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006080774.1
SIO_010081: LOC112231689
subclass of: SO_0000673
so part of: LOC112231689
location: complement(join(1353897..1354208,1354369..1354413,1354615..1354683,1354767..1354863))
location: region:1353897-1354863:-1
so has part: feature:1354767-1354863:-1:exon
so has part: feature:1354615-1354683:-1:exon
so has part: feature:1354369-1354413:-1:exon
so has part: feature:1353897-1354208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1354767-1354863:-1:exon

position:1354767:-1
position: 1354767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1354615-1354683:-1:exon

position:1354615:-1
position: 1354615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354683:-1
position: 1354683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354369-1354413:-1:exon

position:1354369:-1
position: 1354369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354413:-1
position: 1354413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1353897-1354208:-1:exon

position:1354208:-1
position: 1354208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841816
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1365275..1366589)
location: region:1365275-1366589:-1
so has part: feature:1365275-1366589:-1:exon
subclass of: SO_0000010

121841816
type: Gene
SIO_000068: ncbigene

position:1365275:-1
position: 1365275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366589:-1
position: 1366589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365275-1366589:-1:exon

LOC121841816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841816
product: CASP-like protein 4A1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312087.1
SIO_010081: LOC121841816
subclass of: SO_0000673
so part of: LOC121841816
location: complement(join(1365275..1365685,1366123..1366179,1366307..1366372,1366531..1366589))
location: region:1365275-1366589:-1
so has part: feature:1366531-1366589:-1:exon
so has part: feature:1366307-1366372:-1:exon
so has part: feature:1366123-1366179:-1:exon
so has part: feature:1365275-1365685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1366531-1366589:-1:exon

position:1366531:-1
position: 1366531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366307-1366372:-1:exon

position:1366307:-1
position: 1366307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366372:-1
position: 1366372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366123-1366179:-1:exon

position:1366123:-1
position: 1366123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366179:-1
position: 1366179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1365275-1365685:-1:exon

position:1365685:-1
position: 1365685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CASP-like protein 4A1
translation: MKTFSMKIVVLLGFVMLLSIALAEHEHGHQHVIEKRSSSEERVRGPGRGRGFPNFLQQYQYQYQYQQYLLLLQRLGLVPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAGR
SIO_010081: LOC121841816
subclass of: SO_0000673
so part of: LOC121841816
location: complement(join(1365452..1365685,1366123..1366179,1366307..1366372))
location: region:1365452-1366372:-1
so has part: feature:1366307-1366372:-1:exon
so has part: feature:1366123-1366179:-1:exon
so has part: feature:1365452-1365685:-1:exon

XP_042168021.1
type: Protein
SIO_000068: ncbiprotein

position:1365452:-1
position: 1365452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366307-1366372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366123-1366179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365452-1365685:-1:exon

LOC112231684
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378605..1379977)
location: region:1378605-1379977:-1
so has part: feature:1378605-1379977:-1:exon
subclass of: SO_0000010

112231684
type: Gene
SIO_000068: ncbigene

position:1378605:-1
position: 1378605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379977:-1
position: 1379977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378605-1379977:-1:exon

LOC112231684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231684
product: CASP-like protein 4A1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398392.2
SIO_010081: LOC112231684
subclass of: SO_0000673
so part of: LOC112231684
location: complement(join(1378605..1379012,1379490..1379546,1379674..1379739,1379898..1379977))
location: region:1378605-1379977:-1
so has part: feature:1379898-1379977:-1:exon
so has part: feature:1379674-1379739:-1:exon
so has part: feature:1379490-1379546:-1:exon
so has part: feature:1378605-1379012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1379898-1379977:-1:exon

position:1379898:-1
position: 1379898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379674-1379739:-1:exon

position:1379674:-1
position: 1379674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379739:-1
position: 1379739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1379490-1379546:-1:exon

position:1379490:-1
position: 1379490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379546:-1
position: 1379546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1378605-1379012:-1:exon

position:1379012:-1
position: 1379012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CASP-like protein 4A1
translation: MSVQGHTEALRRLLTLRYVKMKTFSMKIVVLLGFVMLLSIALAEHEHGHQHVIEKRSSSEERVRGPGPGRGFPNFLQQYQYQYQYQQYLLLLQRLGLVPAPAAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAGR
SIO_010081: LOC112231684
subclass of: SO_0000673
so part of: LOC112231684
location: complement(join(1378782..1379012,1379490..1379546,1379674..1379739,1379898..1379957))
location: region:1378782-1379957:-1
so has part: feature:1379898-1379957:-1:exon
so has part: feature:1379674-1379739:-1:exon
so has part: feature:1379490-1379546:-1:exon
so has part: feature:1378782-1379012:-1:exon

XP_024254160.1
type: Protein
SIO_000068: ncbiprotein

position:1378782:-1
position: 1378782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379957:-1
position: 1379957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379898-1379957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1379674-1379739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1379490-1379546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378782-1379012:-1:exon

LOC112231685
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1382696..1383893)
location: region:1382696-1383893:-1
so has part: feature:1382696-1383893:-1:exon
subclass of: SO_0000010

112231685
type: Gene
SIO_000068: ncbigene

position:1382696:-1
position: 1382696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383893:-1
position: 1383893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382696-1383893:-1:exon

LOC112231685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231685
product: late cornified envelope-like proline-rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_024398393.2
SIO_010081: LOC112231685
subclass of: SO_0000673
so part of: LOC112231685
location: complement(join(1382696..1383189,1383360..1383428,1383578..1383651,1383786..1383893))
location: region:1382696-1383893:-1
so has part: feature:1383786-1383893:-1:exon
so has part: feature:1383578-1383651:-1:exon
so has part: feature:1383360-1383428:-1:exon
so has part: feature:1382696-1383189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383786-1383893:-1:exon

position:1383786:-1
position: 1383786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383578-1383651:-1:exon

position:1383578:-1
position: 1383578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383651:-1
position: 1383651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383360-1383428:-1:exon

position:1383360:-1
position: 1383360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383428:-1
position: 1383428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382696-1383189:-1:exon

position:1383189:-1
position: 1383189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late cornified envelope-like proline-rich protein 1
translation: MMMKTVIFLGCLLGLSLALPADVDHLRVARSSSDSNSNSNSREAGSFLPSLPQLNSNQLLQLLLKLFAASVPAPAPAPAPAPAPAPCPSPCPPSPSPSPCPCPSPCTSPCPCTSPCPRWTLNR
SIO_010081: LOC112231685
subclass of: SO_0000673
so part of: LOC112231685
location: complement(join(1382947..1383189,1383360..1383428,1383578..1383637))
location: region:1382947-1383637:-1
so has part: feature:1383578-1383637:-1:exon
so has part: feature:1383360-1383428:-1:exon
so has part: feature:1382947-1383189:-1:exon

XP_024254161.2
type: Protein
SIO_000068: ncbiprotein

position:1382947:-1
position: 1382947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383637:-1
position: 1383637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383578-1383637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383360-1383428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382947-1383189:-1:exon

LOC112231688
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1402034..1403105)
location: region:1402034-1403105:-1
so has part: feature:1402034-1403105:-1:exon
subclass of: SO_0000011

112231688
type: Gene
SIO_000068: ncbigene

position:1402034:-1
position: 1402034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403105:-1
position: 1403105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402034-1403105:-1:exon

LOC112231688
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74940
nc RNA class: lncRNA
gene: LOC112231688
product: uncharacterized LOC112231688
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_002950502.2
SIO_010081: LOC112231688
subclass of: SO_0000673
so part of: LOC112231688
location: complement(join(1402034..1402377,1402575..1402619,1402821..1402889,1402980..1403105))
location: region:1402034-1403105:-1
so has part: feature:1402980-1403105:-1:exon
so has part: feature:1402821-1402889:-1:exon
so has part: feature:1402575-1402619:-1:exon
so has part: feature:1402034-1402377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402980-1403105:-1:exon

position:1402980:-1
position: 1402980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1402821-1402889:-1:exon

position:1402821:-1
position: 1402821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402889:-1
position: 1402889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1402575-1402619:-1:exon

position:1402575:-1
position: 1402575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402619:-1
position: 1402619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1402034-1402377:-1:exon

position:1402377:-1
position: 1402377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231690
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1408790..1413674
location: region:1408790-1413674:1
so has part: feature:1408790-1413674:1:exon
subclass of: SO_0000010

112231690
type: Gene
SIO_000068: ncbigene

position:1408790:1
position: 1408790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413674:1
position: 1413674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408790-1413674:1:exon

LOC112231690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231690
product: proline-rich protein HaeIII subfamily 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398395.2
SIO_010081: LOC112231690
subclass of: SO_0000673
so part of: LOC112231690
location: join(1408790..1408809,1409629..1409693,1409820..1409909,1410069..1410218,1410341..1410475,1410733..1410819,1410944..1411084,1411284..1411391,1411484..1411513,1411711..1411731,1411818..1411844,1411978..1412004,1412108..1412134,1412261..1412290,1412420..1412449,1412570..1412611,1412747..1412782,1412960..1412977,1413073..1413126,1413214..1413674)
location: region:1408790-1413674:1
so has part: feature:1408790-1408809:1:exon
so has part: feature:1409629-1409693:1:exon
so has part: feature:1409820-1409909:1:exon
so has part: feature:1410069-1410218:1:exon
so has part: feature:1410341-1410475:1:exon
so has part: feature:1410733-1410819:1:exon
so has part: feature:1410944-1411084:1:exon
so has part: feature:1411284-1411391:1:exon
so has part: feature:1411484-1411513:1:exon
so has part: feature:1411711-1411731:1:exon
so has part: feature:1411818-1411844:1:exon
so has part: feature:1411978-1412004:1:exon
so has part: feature:1412108-1412134:1:exon
so has part: feature:1412261-1412290:1:exon
so has part: feature:1412420-1412449:1:exon
so has part: feature:1412570-1412611:1:exon
so has part: feature:1412747-1412782:1:exon
so has part: feature:1412960-1412977:1:exon
so has part: feature:1413073-1413126:1:exon
so has part: feature:1413214-1413674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1408790-1408809:1:exon

position:1408809:1
position: 1408809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409629-1409693:1:exon

position:1409629:1
position: 1409629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409693:1
position: 1409693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1409820-1409909:1:exon

position:1409820:1
position: 1409820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409909:1
position: 1409909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1410069-1410218:1:exon

position:1410069:1
position: 1410069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410218:1
position: 1410218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1410341-1410475:1:exon

position:1410341:1
position: 1410341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410475:1
position: 1410475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1410733-1410819:1:exon

position:1410733:1
position: 1410733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410819:1
position: 1410819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1410944-1411084:1:exon

position:1410944:1
position: 1410944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411084:1
position: 1411084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1411284-1411391:1:exon

position:1411284:1
position: 1411284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411391:1
position: 1411391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1411484-1411513:1:exon

position:1411484:1
position: 1411484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411513:1
position: 1411513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1411711-1411731:1:exon

position:1411711:1
position: 1411711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411731:1
position: 1411731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1411818-1411844:1:exon

position:1411818:1
position: 1411818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411844:1
position: 1411844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1411978-1412004:1:exon

position:1411978:1
position: 1411978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412004:1
position: 1412004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1412108-1412134:1:exon

position:1412108:1
position: 1412108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412134:1
position: 1412134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1412261-1412290:1:exon

position:1412261:1
position: 1412261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412290:1
position: 1412290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1412420-1412449:1:exon

position:1412420:1
position: 1412420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412449:1
position: 1412449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1412570-1412611:1:exon

position:1412570:1
position: 1412570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412611:1
position: 1412611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1412747-1412782:1:exon

position:1412747:1
position: 1412747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412782:1
position: 1412782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1412960-1412977:1:exon

position:1412960:1
position: 1412960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412977:1
position: 1412977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1413073-1413126:1:exon

position:1413073:1
position: 1413073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413126:1
position: 1413126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1413214-1413674:1:exon

position:1413214:1
position: 1413214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein HaeIII subfamily 1-like
translation: MEYLCVVILLFSAVATHADPWRQLQQGDSRFLPFGGPQQSPDRHPMRPNGRDPWMKDGSLPPFGGQPIGGGGENSRPIGGGPTWQGWDMGGTGNPGWPDQDQMPPWYPNRPSGGPGSGDTQRLMGGPESGGPLDYPDRDYKRREDEGQWWNQGTMRGDRGSSSPADLPPVTGSDFGYAPNGPRPHPGQGTPRGPGSRWRRPAGPPRGGRPNMRNLDARPDRNPIRPSAVPSGAGGRPPFDDTIFGGRLLQPEMVGNREFIPIFQADNVTLQNASGLPLKEGENIFLLPKGGRGTPPPRHGHKRPQELGFGYPHSSGFQFQPYLKLIYNPSATNKISFEYGITTLLPSFMKAEETKTWEEEGK
SIO_010081: LOC112231690
subclass of: SO_0000673
so part of: LOC112231690
location: join(1409643..1409693,1409820..1409909,1410069..1410218,1410341..1410475,1410733..1410819,1410944..1411084,1411284..1411391,1411484..1411513,1411711..1411731,1411818..1411844,1411978..1412004,1412108..1412134,1412261..1412290,1412420..1412449,1412570..1412611,1412747..1412782,1412960..1412977,1413073..1413111)
location: region:1409643-1413111:1
so has part: feature:1409643-1409693:1:exon
so has part: feature:1409820-1409909:1:exon
so has part: feature:1410069-1410218:1:exon
so has part: feature:1410341-1410475:1:exon
so has part: feature:1410733-1410819:1:exon
so has part: feature:1410944-1411084:1:exon
so has part: feature:1411284-1411391:1:exon
so has part: feature:1411484-1411513:1:exon
so has part: feature:1411711-1411731:1:exon
so has part: feature:1411818-1411844:1:exon
so has part: feature:1411978-1412004:1:exon
so has part: feature:1412108-1412134:1:exon
so has part: feature:1412261-1412290:1:exon
so has part: feature:1412420-1412449:1:exon
so has part: feature:1412570-1412611:1:exon
so has part: feature:1412747-1412782:1:exon
so has part: feature:1412960-1412977:1:exon
so has part: feature:1413073-1413111:1:exon

XP_024254163.1
type: Protein
SIO_000068: ncbiprotein

position:1409643:1
position: 1409643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413111:1
position: 1413111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409643-1409693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409820-1409909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1410069-1410218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1410341-1410475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410733-1410819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410944-1411084:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411284-1411391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411484-1411513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411711-1411731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1411818-1411844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1411978-1412004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1412108-1412134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412261-1412290:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412420-1412449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1412570-1412611:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1412747-1412782:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1412960-1412977:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1413073-1413111:1:exon

odam
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: odam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1413734..1416632)
location: region:1413734-1416632:-1
so has part: feature:1413734-1416632:-1:exon
subclass of: SO_0000010

112231691
type: Gene
SIO_000068: ncbigene

position:1413734:-1
position: 1413734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416632:-1
position: 1416632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413734-1416632:-1:exon

odam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: odam
product: odontogenic, ameloblast associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_024398398.2
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1413734..1413833,1413972..1414036,1414194..1414277,1414402..1414431,1414770..1414886,1415198..1415212,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416353,1416504..1416632))
location: region:1413734-1416632:-1
so has part: feature:1416504-1416632:-1:exon
so has part: feature:1416288-1416353:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415212:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414431:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1413972-1414036:-1:exon
so has part: feature:1413734-1413833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1416504-1416632:-1:exon

position:1416504:-1
position: 1416504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1416288-1416353:-1:exon

position:1416288:-1
position: 1416288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416353:-1
position: 1416353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1416151-1416195:-1:exon

position:1416151:-1
position: 1416151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416195:-1
position: 1416195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415921-1415980:-1:exon

position:1415921:-1
position: 1415921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415980:-1
position: 1415980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1415538-1415771:-1:exon

position:1415538:-1
position: 1415538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415771:-1
position: 1415771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1415198-1415212:-1:exon

position:1415198:-1
position: 1415198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415212:-1
position: 1415212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1414770-1414886:-1:exon

position:1414770:-1
position: 1414770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414886:-1
position: 1414886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1414402-1414431:-1:exon

position:1414402:-1
position: 1414402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414431:-1
position: 1414431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1414194-1414277:-1:exon

position:1414194:-1
position: 1414194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414277:-1
position: 1414277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1413972-1414036:-1:exon

position:1413972:-1
position: 1413972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414036:-1
position: 1414036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1413734-1413833:-1:exon

position:1413833:-1
position: 1413833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

odam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: odam
product: odontogenic, ameloblast associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_024398397.2
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1413734..1413833,1413972..1414036,1414194..1414277,1414402..1414428,1414770..1414886,1415198..1415260,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416353,1416504..1416632))
location: region:1413734-1416632:-1
so has part: feature:1416504-1416632:-1:exon
so has part: feature:1416288-1416353:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415260:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414428:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1413972-1414036:-1:exon
so has part: feature:1413734-1413833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1416504-1416632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416288-1416353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1416151-1416195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415921-1415980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415538-1415771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1415198-1415260:-1:exon

position:1415260:-1
position: 1415260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1414770-1414886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414402-1414428:-1:exon

position:1414428:-1
position: 1414428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1414194-1414277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1413972-1414036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1413734-1413833:-1:exon

odam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: odam
product: odontogenic, ameloblast associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_024398396.2
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1413734..1413833,1413972..1414036,1414194..1414277,1414402..1414431,1414770..1414886,1415198..1415260,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416353,1416504..1416632))
location: region:1413734-1416632:-1
so has part: feature:1416504-1416632:-1:exon
so has part: feature:1416288-1416353:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415260:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414431:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1413972-1414036:-1:exon
so has part: feature:1413734-1413833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1416504-1416632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416288-1416353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1416151-1416195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415921-1415980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415538-1415771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1415198-1415260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414770-1414886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414402-1414431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414194-1414277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1413972-1414036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1413734-1413833:-1:exon

odam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: odam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich proteoglycan 2 isoform X3
translation: MKPQTVTVLVCLLGASLSLPIYQQQIGILASNSNEILRLNGLTLTGIGFGQTQMQASPFMPQYVIQQQPELGLPQMVNFNPQVGGPFGPQMMFPTQGNQLPPILYANAQQEQPGAPQDPNNPNNPQQPHNPAQQPRMQGYPYYMSYGYPNYPQPNQNNGQNQLNLEKTPQKPQLPLQQAAQPQAPGKTWPKGFQTEAANPPPDHRGDTVDPGVDEGRSNFSFLFEP
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1414001..1414036,1414194..1414277,1414402..1414431,1414770..1414886,1415198..1415212,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416347))
location: region:1414001-1416347:-1
so has part: feature:1416288-1416347:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415212:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414431:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1414001-1414036:-1:exon

XP_024254166.1
type: Protein
SIO_000068: ncbiprotein

position:1414001:-1
position: 1414001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416347:-1
position: 1416347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416288-1416347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416151-1416195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415921-1415980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415538-1415771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415198-1415212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414770-1414886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414402-1414431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414194-1414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414001-1414036:-1:exon

odam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: odam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sporozoite surface protein 2 isoform X2
translation: MKPQTVTVLVCLLGASLSLPIYQQQIGILASNSNEILRLNGLTLTGIGFGQTQMQASPFMPQYVIQQQPELGLPQMVNFNPQVGGPFGPQMMFPTQGNQLPPILYANAQQEQPGAPQDPNNPNNPQQPHNPAQGVPQFPQYYPSFSFPQQPRMQGYPYYMSYGYPNYPQPNQNNGQNQLNLEKTPQKPQLPLQAAQPQAPGKTWPKGFQTEAANPPPDHRGDTVDPGVDEGRSNFSFLFEP
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1414001..1414036,1414194..1414277,1414402..1414428,1414770..1414886,1415198..1415260,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416347))
location: region:1414001-1416347:-1
so has part: feature:1416288-1416347:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415260:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414428:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1414001-1414036:-1:exon

XP_024254165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1416288-1416347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416151-1416195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415921-1415980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415538-1415771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415198-1415260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414770-1414886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414402-1414428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414194-1414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414001-1414036:-1:exon

odam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: odam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II degradation factor 1 isoform X1
translation: MKPQTVTVLVCLLGASLSLPIYQQQIGILASNSNEILRLNGLTLTGIGFGQTQMQASPFMPQYVIQQQPELGLPQMVNFNPQVGGPFGPQMMFPTQGNQLPPILYANAQQEQPGAPQDPNNPNNPQQPHNPAQGVPQFPQYYPSFSFPQQPRMQGYPYYMSYGYPNYPQPNQNNGQNQLNLEKTPQKPQLPLQQAAQPQAPGKTWPKGFQTEAANPPPDHRGDTVDPGVDEGRSNFSFLFEP
SIO_010081: odam
subclass of: SO_0000673
so part of: odam
location: complement(join(1414001..1414036,1414194..1414277,1414402..1414431,1414770..1414886,1415198..1415260,1415538..1415771,1415921..1415980,1416151..1416195,1416288..1416347))
location: region:1414001-1416347:-1
so has part: feature:1416288-1416347:-1:exon
so has part: feature:1416151-1416195:-1:exon
so has part: feature:1415921-1415980:-1:exon
so has part: feature:1415538-1415771:-1:exon
so has part: feature:1415198-1415260:-1:exon
so has part: feature:1414770-1414886:-1:exon
so has part: feature:1414402-1414431:-1:exon
so has part: feature:1414194-1414277:-1:exon
so has part: feature:1414001-1414036:-1:exon

XP_024254164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1416288-1416347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416151-1416195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415921-1415980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415538-1415771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415198-1415260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414770-1414886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414402-1414431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414194-1414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414001-1414036:-1:exon

LOC112231692
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1420380..1424560)
location: region:1420380-1424560:-1
so has part: feature:1420380-1424560:-1:exon
subclass of: SO_0000010

112231692
type: Gene
SIO_000068: ncbigene

position:1420380:-1
position: 1420380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424560:-1
position: 1424560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420380-1424560:-1:exon

LOC112231692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231692
product: elastin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_024398399.2
SIO_010081: LOC112231692
subclass of: SO_0000673
so part of: LOC112231692
location: complement(join(1420380..1420739,1420838..1420925,1421023..1421076,1421210..1421299,1421630..1421692,1421950..1422096,1422356..1422487,1422634..1422648,1422760..1422812,1422960..1424560))
location: region:1420380-1424560:-1
so has part: feature:1422960-1424560:-1:exon
so has part: feature:1422760-1422812:-1:exon
so has part: feature:1422634-1422648:-1:exon
so has part: feature:1422356-1422487:-1:exon
so has part: feature:1421950-1422096:-1:exon
so has part: feature:1421630-1421692:-1:exon
so has part: feature:1421210-1421299:-1:exon
so has part: feature:1421023-1421076:-1:exon
so has part: feature:1420838-1420925:-1:exon
so has part: feature:1420380-1420739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1422960-1424560:-1:exon

position:1422960:-1
position: 1422960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422760-1422812:-1:exon

position:1422760:-1
position: 1422760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422812:-1
position: 1422812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1422634-1422648:-1:exon

position:1422634:-1
position: 1422634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422648:-1
position: 1422648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1422356-1422487:-1:exon

position:1422356:-1
position: 1422356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422487:-1
position: 1422487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1421950-1422096:-1:exon

position:1421950:-1
position: 1421950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422096:-1
position: 1422096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1421630-1421692:-1:exon

position:1421630:-1
position: 1421630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421692:-1
position: 1421692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1421210-1421299:-1:exon

position:1421210:-1
position: 1421210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421299:-1
position: 1421299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1421023-1421076:-1:exon

position:1421023:-1
position: 1421023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421076:-1
position: 1421076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1420838-1420925:-1:exon

position:1420838:-1
position: 1420838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420925:-1
position: 1420925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1420380-1420739:-1:exon

position:1420739:-1
position: 1420739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin-like
translation: MFKCQRATENTAWRTAPEAKQFSPLQDCKMKLLIFLAFMVTIFNVNAGKKLRLLAGLNGGVVSGVNPGLVVGGLNPGVLPGGTGLIGQPQFAQMVPGVPTYVMQPQAVPNGPYGFPNVGMLQPQLFPNFPGQYQYPAPPANGLPYYMGVPQMAGMNPPQQQVMGVQGAGGIPMMQQQQPQQGPSQAELVRRFKRFLMRRK
SIO_010081: LOC112231692
subclass of: SO_0000673
so part of: LOC112231692
location: complement(join(1421053..1421076,1421210..1421299,1421630..1421692,1421950..1422096,1422356..1422487,1422634..1422648,1422760..1422812,1422960..1423038))
location: region:1421053-1423038:-1
so has part: feature:1422960-1423038:-1:exon
so has part: feature:1422760-1422812:-1:exon
so has part: feature:1422634-1422648:-1:exon
so has part: feature:1422356-1422487:-1:exon
so has part: feature:1421950-1422096:-1:exon
so has part: feature:1421630-1421692:-1:exon
so has part: feature:1421210-1421299:-1:exon
so has part: feature:1421053-1421076:-1:exon

XP_024254167.2
type: Protein
SIO_000068: ncbiprotein

position:1421053:-1
position: 1421053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423038:-1
position: 1423038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422960-1423038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422760-1422812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422634-1422648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422356-1422487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421950-1422096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421630-1421692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1421210-1421299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421053-1421076:-1:exon

LOC121841813
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC121841813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1434080..1442651)
location: region:1434080-1442651:-1
so has part: feature:1434080-1442651:-1:exon
subclass of: SO_0000010

121841813
type: Gene
SIO_000068: ncbigene

position:1434080:-1
position: 1434080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442651:-1
position: 1442651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434080-1442651:-1:exon

LOC121841813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841813
product: uncharacterized LOC121841813, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311993.1
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1434080..1434588,1438142..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441903,1442070..1442651))
location: region:1434080-1442651:-1
so has part: feature:1442070-1442651:-1:exon
so has part: feature:1441853-1441903:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438142-1438285:-1:exon
so has part: feature:1434080-1434588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442070-1442651:-1:exon

position:1442070:-1
position: 1442070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1441853-1441903:-1:exon

position:1441853:-1
position: 1441853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441903:-1
position: 1441903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1441534-1441569:-1:exon

position:1441534:-1
position: 1441534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441569:-1
position: 1441569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1441166-1441273:-1:exon

position:1441166:-1
position: 1441166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441273:-1
position: 1441273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1439174-1439317:-1:exon

position:1439174:-1
position: 1439174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439317:-1
position: 1439317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1438984-1439055:-1:exon

position:1438984:-1
position: 1438984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439055:-1
position: 1439055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1438756-1438830:-1:exon

position:1438756:-1
position: 1438756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438830:-1
position: 1438830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1438142-1438285:-1:exon

position:1438142:-1
position: 1438142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438285:-1
position: 1438285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1434080-1434588:-1:exon

position:1434588:-1
position: 1434588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121841813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841813
product: uncharacterized LOC121841813, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311995.1
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1434080..1434588,1438142..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441853..1441906,1442070..1442651))
location: region:1434080-1442651:-1
so has part: feature:1442070-1442651:-1:exon
so has part: feature:1441853-1441906:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438142-1438285:-1:exon
so has part: feature:1434080-1434588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442070-1442651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441853-1441906:-1:exon

position:1441906:-1
position: 1441906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438142-1438285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434080-1434588:-1:exon

LOC121841813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841813
product: uncharacterized LOC121841813, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311994.1
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1434080..1434588,1438232..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441906,1442070..1442651))
location: region:1434080-1442651:-1
so has part: feature:1442070-1442651:-1:exon
so has part: feature:1441853-1441906:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438232-1438285:-1:exon
so has part: feature:1434080-1434588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442070-1442651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441853-1441906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441534-1441569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438232-1438285:-1:exon

position:1438232:-1
position: 1438232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1434080-1434588:-1:exon

LOC121841813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC121841813
product: uncharacterized LOC121841813, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311992.1
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1434080..1434588,1438142..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441906,1442070..1442651))
location: region:1434080-1442651:-1
so has part: feature:1442070-1442651:-1:exon
so has part: feature:1441853-1441906:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438142-1438285:-1:exon
so has part: feature:1434080-1434588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442070-1442651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441853-1441906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441534-1441569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438142-1438285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1434080-1434588:-1:exon

LOC121841813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121841813 isoform X2
translation: MFCMLWIVFQTMSLLVEAGGQSSGSGEAGGGNGGVVNGGMVVNAVKPGVMNGLVLNGQPFLAQVIPLGQAAMPQLVPIGALQQGGALPIGQAGAANGVPLQQGQLPQLANRVVPLFAVLPQANGIGGPQAPMLMQIIPVGGGNNLQQPAAGGKARKARVKHSVPFHGMPTSTRTDTPLTKVIAGEVEESSGSDTSEC
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1434529..1434588,1438232..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441897))
location: region:1434529-1441897:-1
so has part: feature:1441853-1441897:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438232-1438285:-1:exon
so has part: feature:1434529-1434588:-1:exon

XP_042167928.1
type: Protein
SIO_000068: ncbiprotein

position:1434529:-1
position: 1434529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441897:-1
position: 1441897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441853-1441897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441534-1441569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438232-1438285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434529-1434588:-1:exon

LOC121841813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121841813 isoform X3
translation: MFCMLWIVFQTMSLLAGGGNGGVVNGGMVVNAVKPGVMNGLVLNGQPFLAQVIPLGQAAMPQLVPIGALQQGGALPIGQAGAANGVPLQQGQLPQLANRVVPLFAVLPQANGIGGPQAPMLMQIIPVGGGNNLQQPAAGGKARKARVKHSVPFHGMPTSTRTDTPLVYSQFFLLFTSFVTVGLPLSCI
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1438163..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441853..1441897))
location: region:1438163-1441897:-1
so has part: feature:1441853-1441897:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438163-1438285:-1:exon

XP_042167929.1
type: Protein
SIO_000068: ncbiprotein

position:1438163:-1
position: 1438163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441853-1441897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438163-1438285:-1:exon

LOC121841813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121841813 isoform X1
translation: MFCMLWIVFQTMSLLVEAGGQSSGSGEAGGGNGGVVNGGMVVNAVKPGVMNGLVLNGQPFLAQVIPLGQAAMPQLVPIGALQQGGALPIGQAGAANGVPLQQGQLPQLANRVVPLFAVLPQANGIGGPQAPMLMQIIPVGGGNNLQQPAAGGKARKARVKHSVPFHGMPTSTRTDTPLVYSQFFLLFTSFVTVGLPLSCI
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1438163..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441897))
location: region:1438163-1441897:-1
so has part: feature:1441853-1441897:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438163-1438285:-1:exon

XP_042167926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1441853-1441897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441534-1441569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438163-1438285:-1:exon

LOC121841813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC121841813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121841813 isoform X1
translation: MFCMLWIVFQTMSLLVEAGGQSSGSGEAGGGNGGVVNGGMVVNAVKPGVMNGLVLNGQPFLAQVIPLGQAAMPQLVPIGALQQGGALPIGQAGAANGVPLQQGQLPQLANRVVPLFAVLPQANGIGGPQAPMLMQIIPVGGGNNLQQPAAGGKARKARVKHSVPFHGMPTSTRTDTPLVYSQFFLLFTSFVTVGLPLSCI
SIO_010081: LOC121841813
subclass of: SO_0000673
so part of: LOC121841813
location: complement(join(1438163..1438285,1438756..1438830,1438984..1439055,1439174..1439317,1441166..1441273,1441534..1441569,1441853..1441897))
location: region:1438163-1441897:-1
so has part: feature:1441853-1441897:-1:exon
so has part: feature:1441534-1441569:-1:exon
so has part: feature:1441166-1441273:-1:exon
so has part: feature:1439174-1439317:-1:exon
so has part: feature:1438984-1439055:-1:exon
so has part: feature:1438756-1438830:-1:exon
so has part: feature:1438163-1438285:-1:exon

XP_042167927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1441853-1441897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441534-1441569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441166-1441273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439174-1439317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438984-1439055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438756-1438830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438163-1438285:-1:exon

LOC112231578
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1442745..1457558)
location: region:1442745-1457558:-1
so has part: feature:1442745-1457558:-1:exon
subclass of: SO_0000010

112231578
type: Gene
SIO_000068: ncbigene

position:1442745:-1
position: 1442745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457558:-1
position: 1457558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442745-1457558:-1:exon

LOC112231578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231578
product: SPARC-like protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042311991.1
SIO_010081: LOC112231578
subclass of: SO_0000673
so part of: LOC112231578
location: complement(join(1442745..1443837,1444481..1444629,1445338..1445486,1445856..1445992,1446229..1446349,1446957..1447078,1447619..1447730,1448026..1449216,1449436..1449501,1449612..1449667,1457243..1457558))
location: region:1442745-1457558:-1
so has part: feature:1457243-1457558:-1:exon
so has part: feature:1449612-1449667:-1:exon
so has part: feature:1449436-1449501:-1:exon
so has part: feature:1448026-1449216:-1:exon
so has part: feature:1447619-1447730:-1:exon
so has part: feature:1446957-1447078:-1:exon
so has part: feature:1446229-1446349:-1:exon
so has part: feature:1445856-1445992:-1:exon
so has part: feature:1445338-1445486:-1:exon
so has part: feature:1444481-1444629:-1:exon
so has part: feature:1442745-1443837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1457243-1457558:-1:exon

position:1457243:-1
position: 1457243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1449612-1449667:-1:exon

position:1449612:-1
position: 1449612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449667:-1
position: 1449667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1449436-1449501:-1:exon

position:1449436:-1
position: 1449436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449501:-1
position: 1449501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1448026-1449216:-1:exon

position:1448026:-1
position: 1448026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449216:-1
position: 1449216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1447619-1447730:-1:exon

position:1447619:-1
position: 1447619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447730:-1
position: 1447730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1446957-1447078:-1:exon

position:1446957:-1
position: 1446957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447078:-1
position: 1447078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1446229-1446349:-1:exon

position:1446229:-1
position: 1446229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446349:-1
position: 1446349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1445856-1445992:-1:exon

position:1445856:-1
position: 1445856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445992:-1
position: 1445992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1445338-1445486:-1:exon

position:1445338:-1
position: 1445338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445486:-1
position: 1445486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1444481-1444629:-1:exon

position:1444481:-1
position: 1444481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444629:-1
position: 1444629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1442745-1443837:-1:exon

position:1443837:-1
position: 1443837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-like protein 1
translation: MKTHLLFICLLTSAFAVSVKGKPHDKHQALSKSSHTAKEKDIVPDEANEGEVLPTFMTFESSSQDQEDDDMSYEDNANVNMGPSNEEGVFEVSDSGERSTPVLLSDKALVDLLQGESEEEEVEEEEEEEEEEGKIESEETQSEEEEGEEAEGDLEKEEEDEEVIDGEEEVDVEAEKEAEKVEAMADEEESDEDEEKGEEEAEPVVGDGGVKQEAEVEETYSNTEPEIPEDLDYAGDSDNTQPLETELEEGKSLAEDAQLLLNKEEEAKVEEKEEQVSKEDEIPTATDDYESQQDIQEAEASESQEVLGQYKLPEGSKDQQKGSKDNSQEKGNNKKDGDTDAELQETKNSVDLDGTHLSVEGGEEKEQKNINESASHTLGKATKQRKNQRVRKHPPQRDEAPPGEGVPDHQGDEGEKEYYRTTDNAVYKPKRRRAGKWAPLVGMNPVQIRATVDLYPSARPSLAASLYRPQTSAADPCENFRCKRGKTCKLIEEKKPTCVCQEPSACPQSVTDYDHVCGTNNVTYDTSCELFATKCNLEGSKRGHRLHLDYTGPCKFIAPCMNGELVQFPLRMRDWLKNVLLQLYEHDSMSPGFLTPKQRIRVRKIHESERRLHAGDHPIELLAQDFEKNYNMYIYPVHWQFAQMDQHPSDRFLSHSELAPLRVPLVPMEHCTSRFFQECDADKDKQVSFREWAHCFGIKDEDMDVNLLF
SIO_010081: LOC112231578
subclass of: SO_0000673
so part of: LOC112231578
location: complement(join(1443809..1443837,1444481..1444629,1445338..1445486,1445856..1445992,1446229..1446349,1446957..1447078,1447619..1447730,1448026..1449216,1449436..1449501,1449612..1449665))
location: region:1443809-1449665:-1
so has part: feature:1449612-1449665:-1:exon
so has part: feature:1449436-1449501:-1:exon
so has part: feature:1448026-1449216:-1:exon
so has part: feature:1447619-1447730:-1:exon
so has part: feature:1446957-1447078:-1:exon
so has part: feature:1446229-1446349:-1:exon
so has part: feature:1445856-1445992:-1:exon
so has part: feature:1445338-1445486:-1:exon
so has part: feature:1444481-1444629:-1:exon
so has part: feature:1443809-1443837:-1:exon

XP_042167925.1
type: Protein
SIO_000068: ncbiprotein

position:1443809:-1
position: 1443809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449665:-1
position: 1449665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449612-1449665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449436-1449501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448026-1449216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1447619-1447730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446957-1447078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1446229-1446349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445856-1445992:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1445338-1445486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1444481-1444629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443809-1443837:-1:exon

LOC112231694
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1465302..1466640)
location: region:1465302-1466640:-1
so has part: feature:1465302-1466640:-1:exon
subclass of: SO_0000010

112231694
type: Gene
SIO_000068: ncbigene

position:1465302:-1
position: 1465302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466640:-1
position: 1466640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465302-1466640:-1:exon

LOC112231694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231694
product: glycoprotein hormones alpha chain 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398401.2
SIO_010081: LOC112231694
subclass of: SO_0000673
so part of: LOC112231694
location: complement(join(1465302..1465653,1465861..1466036,1466288..1466400,1466532..1466640))
location: region:1465302-1466640:-1
so has part: feature:1466532-1466640:-1:exon
so has part: feature:1466288-1466400:-1:exon
so has part: feature:1465861-1466036:-1:exon
so has part: feature:1465302-1465653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466532-1466640:-1:exon

position:1466532:-1
position: 1466532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1466288-1466400:-1:exon

position:1466288:-1
position: 1466288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466400:-1
position: 1466400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1465861-1466036:-1:exon

position:1465861:-1
position: 1465861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466036:-1
position: 1466036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465302-1465653:-1:exon

position:1465653:-1
position: 1465653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112231694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein hormones alpha chain 2
translation: MGRGIKVNGGSNRVYTLNTDQASTKIHNIRRILPPVTKMCLLKSTGLSLILSALVVIADSYPKSDKTNMGCEECTLKPNTIFPNIMQCTGCCFSRAYPTPLRSKQTMLVPKNITSEATCCVAKEGERVTTKDGFPVTNHTECHCSTCYYHKS
SIO_010081: LOC112231694
subclass of: SO_0000673
so part of: LOC112231694
location: complement(join(1465576..1465653,1465861..1466036,1466288..1466400,1466532..1466623))
location: region:1465576-1466623:-1
so has part: feature:1466532-1466623:-1:exon
so has part: feature:1466288-1466400:-1:exon
so has part: feature:1465861-1466036:-1:exon
so has part: feature:1465576-1465653:-1:exon

XP_024254169.1
type: Protein
SIO_000068: ncbiprotein

position:1465576:-1
position: 1465576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466623:-1
position: 1466623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466532-1466623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1466288-1466400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465861-1466036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465576-1465653:-1:exon

scpp1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: scpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1469671..1476701
location: region:1469671-1476701:1
so has part: feature:1469671-1476701:1:exon
subclass of: SO_0000010

112231695
type: Gene
SIO_000068: ncbigene

position:1469671:1
position: 1469671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476701:1
position: 1476701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469671-1476701:1:exon

scpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: scpp1
product: secretory calcium-binding phosphoprotein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_024398405.2
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1469671..1469922,1470460..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472339..1472407,1475657..1476701)
location: region:1469671-1476701:1
so has part: feature:1469671-1469922:1:exon
so has part: feature:1470460-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472339-1472407:1:exon
so has part: feature:1475657-1476701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469671-1469922:1:exon

position:1469922:1
position: 1469922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1470460-1470510:1:exon

position:1470460:1
position: 1470460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470510:1
position: 1470510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1470874-1470942:1:exon

position:1470874:1
position: 1470874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470942:1
position: 1470942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1471155-1471184:1:exon

position:1471155:1
position: 1471155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471184:1
position: 1471184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1471456-1471497:1:exon

position:1471456:1
position: 1471456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471497:1
position: 1471497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1472152-1472202:1:exon

position:1472152:1
position: 1472152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472202:1
position: 1472202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1472339-1472407:1:exon

position:1472339:1
position: 1472339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472407:1
position: 1472407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1475657-1476701:1:exon

position:1475657:1
position: 1475657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

scpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: scpp1
product: secretory calcium-binding phosphoprotein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_024398402.2
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1469672..1469922,1470269..1470323,1470460..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472339..1472407,1475657..1476701)
location: region:1469672-1476701:1
so has part: feature:1469672-1469922:1:exon
so has part: feature:1470269-1470323:1:exon
so has part: feature:1470460-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472339-1472407:1:exon
so has part: feature:1475657-1476701:1:exon

position:1469672:1
position: 1469672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469672-1469922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470269-1470323:1:exon

position:1470269:1
position: 1470269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470323:1
position: 1470323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1470460-1470510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470874-1470942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471155-1471184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471456-1471497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472152-1472202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1472339-1472407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1475657-1476701:1:exon

scpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: scpp1
product: secretory calcium-binding phosphoprotein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_024398403.2
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1469674..1469922,1470269..1470323,1470460..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472342..1472407,1475657..1476701)
location: region:1469674-1476701:1
so has part: feature:1469674-1469922:1:exon
so has part: feature:1470269-1470323:1:exon
so has part: feature:1470460-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472342-1472407:1:exon
so has part: feature:1475657-1476701:1:exon

position:1469674:1
position: 1469674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469674-1469922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470269-1470323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470460-1470510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470874-1470942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471155-1471184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471456-1471497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472152-1472202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1472342-1472407:1:exon

position:1472342:1
position: 1472342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1475657-1476701:1:exon

scpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: scpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory calcium-binding phosphoprotein 1 isoform X1
translation: MKITIVIFCLVGAVYANPILYKAILEQSELESSNMTQTQRLSSPASQSLHQSDTSELKSSEESTSEDQSSESESESLESNSESSESHSLESASQSLEDRQTDSNAIGDTRDNSQGSEENVRKNWIRVFAVRVLSAEDNSSSEVKGQLDLPTNQGAVKQSTLSPTTLTTNHSQPGDTVQSNVALALVESFLKASGSLSETSVSIDTSDVSAVTGNVSTVTSDVSTVNFDIRDTSNIKDTSDSSESSESSESSDTSETSDSSNTSDSKESDTSESEERHQSQATDCQQGVHSTACDSEEYFIQDIGDDGQYPMDDLLMPEEEHRELSLRR
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1470270..1470323,1470460..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472339..1472407,1475657..1476277)
location: region:1470270-1476277:1
so has part: feature:1470270-1470323:1:exon
so has part: feature:1470460-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472339-1472407:1:exon
so has part: feature:1475657-1476277:1:exon

XP_024254170.1
type: Protein
SIO_000068: ncbiprotein

position:1470270:1
position: 1470270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476277:1
position: 1476277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470270-1470323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470460-1470510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470874-1470942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471155-1471184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471456-1471497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1472152-1472202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472339-1472407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475657-1476277:1:exon

scpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: scpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory calcium-binding phosphoprotein 1 isoform X2
translation: MKITIVIFCLVGAVYANPILYKAILEQSELESSNMTQTQRLSSPASQSLHQSDTSELKSSEESTSEDQSSESESESLESNSESSESHSLESASQSLEDRTDSNAIGDTRDNSQGSEENVRKNWIRVFAVRVLSAEDNSSSEVKGQLDLPTNQGAVKQSTLSPTTLTTNHSQPGDTVQSNVALALVESFLKASGSLSETSVSIDTSDVSAVTGNVSTVTSDVSTVNFDIRDTSNIKDTSDSSESSESSESSDTSETSDSSNTSDSKESDTSESEERHQSQATDCQQGVHSTACDSEEYFIQDIGDDGQYPMDDLLMPEEEHRELSLRR
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1470270..1470323,1470460..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472342..1472407,1475657..1476277)
location: region:1470270-1476277:1
so has part: feature:1470270-1470323:1:exon
so has part: feature:1470460-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472342-1472407:1:exon
so has part: feature:1475657-1476277:1:exon

XP_024254171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1470270-1470323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470460-1470510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470874-1470942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471155-1471184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471456-1471497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1472152-1472202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472342-1472407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475657-1476277:1:exon

scpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: scpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory calcium-binding phosphoprotein 1 isoform X3
translation: MTQTQRLSSPASQSLHQSDTSELKSSEESTSEDQSSESESESLESNSESSESHSLESASQSLEDRQTDSNAIGDTRDNSQGSEENVRKNWIRVFAVRVLSAEDNSSSEVKGQLDLPTNQGAVKQSTLSPTTLTTNHSQPGDTVQSNVALALVESFLKASGSLSETSVSIDTSDVSAVTGNVSTVTSDVSTVNFDIRDTSNIKDTSDSSESSESSESSDTSETSDSSNTSDSKESDTSESEERHQSQATDCQQGVHSTACDSEEYFIQDIGDDGQYPMDDLLMPEEEHRELSLRR
SIO_010081: scpp1
subclass of: SO_0000673
so part of: scpp1
location: join(1470508..1470510,1470874..1470942,1471155..1471184,1471456..1471497,1472152..1472202,1472339..1472407,1475657..1476277)
location: region:1470508-1476277:1
so has part: feature:1470508-1470510:1:exon
so has part: feature:1470874-1470942:1:exon
so has part: feature:1471155-1471184:1:exon
so has part: feature:1471456-1471497:1:exon
so has part: feature:1472152-1472202:1:exon
so has part: feature:1472339-1472407:1:exon
so has part: feature:1475657-1476277:1:exon

XP_024254173.1
type: Protein
SIO_000068: ncbiprotein

position:1470508:1
position: 1470508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470508-1470510:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470874-1470942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1471155-1471184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471456-1471497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1472152-1472202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1472339-1472407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1475657-1476277:1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1480024..1480097
location: region:1480024-1480097:1
so has part: feature:1480024-1480097:1:exon
subclass of: SO_0000663

112232075
type: Gene
SIO_000068: ncbigene

position:1480024:1
position: 1480024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480097:1
position: 1480097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480024-1480097:1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 74940
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1480058..1480060,aa:Ile,seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: 1480024..1480097
location: region:1480024-1480097:1
so has part: feature:1480024-1480097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1480024-1480097:1:exon

LOC112231696
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: LOC112231696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1480491..1488038
location: region:1480491-1488038:1
so has part: feature:1480491-1488038:1:exon
subclass of: SO_0000010

112231696
type: Gene
SIO_000068: ncbigene

position:1480491:1
position: 1480491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488038:1
position: 1488038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480491-1488038:1:exon

LOC112231696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231696
product: TNFAIP3-interacting protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398407.2
SIO_010081: LOC112231696
subclass of: SO_0000673
so part of: LOC112231696
location: join(1480491..1481302,1481986..1482288,1484370..1484711,1484947..1485069,1486218..1488038)
location: region:1480491-1488038:1
so has part: feature:1480491-1481302:1:exon
so has part: feature:1481986-1482288:1:exon
so has part: feature:1484370-1484711:1:exon
so has part: feature:1484947-1485069:1:exon
so has part: feature:1486218-1488038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1480491-1481302:1:exon

position:1481302:1
position: 1481302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481986-1482288:1:exon

position:1481986:1
position: 1481986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482288:1
position: 1482288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1484370-1484711:1:exon

position:1484370:1
position: 1484370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484711:1
position: 1484711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1484947-1485069:1:exon

position:1484947:1
position: 1484947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485069:1
position: 1485069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1486218-1488038:1:exon

position:1486218:1
position: 1486218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112231696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: LOC112231696
product: TNFAIP3-interacting protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398406.2
SIO_010081: LOC112231696
subclass of: SO_0000673
so part of: LOC112231696
location: join(1480494..1481302,1481986..1482288,1483841..1483930,1484370..1484711,1484947..1485069,1486218..1488038)
location: region:1480494-1488038:1
so has part: feature:1480494-1481302:1:exon
so has part: feature:1481986-1482288:1:exon
so has part: feature:1483841-1483930:1:exon
so has part: feature:1484370-1484711:1:exon
so has part: feature:1484947-1485069:1:exon
so has part: feature:1486218-1488038:1:exon

position:1480494:1
position: 1480494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480494-1481302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481986-1482288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1483841-1483930:1:exon

position:1483841:1
position: 1483841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483930:1
position: 1483930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1484370-1484711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484947-1485069:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1486218-1488038:1:exon

LOC112231696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNFAIP3-interacting protein 2 isoform X1
translation: MTSGIRNMTGIKNTMDVDLDNDTLKSKIRSCHTLTTFYHETRLEIDTLSKKIKKRDNLIADLKARLGKYENTCINVEGYDPVVIAPAESLLESLCKEICKLKLKLKDTEMNAVQQAELRQQEIQRLQQLLREMERELESVIRQSDHEKDQDIQRLRSALAERDRAQATRAVLCTSLAGEADQLRGQLGATVRVCQELLGRLEREKGGERVTEEVKMQQKAKEILDYMEAGRVDIRVSKLQEENQKLTQRVAYVEGLNSKWQKYDSSREQYVRYLCQKLNESSALAVSSSPAPGMGHRLGPRPTQEPGPGLGLFPELASAKAGLLQQEIARLNGLLDEKLGDCGRLGRELDESRRRYKDRIQMLEQQVLIYTDDFKSERADRERAQGRIQDLQEEVSRLQEQLHTHAQSPTRDANSTCRVHKGHRISPRMSTDSAESLLRNSANPPVTKIKN
SIO_010081: LOC112231696
subclass of: SO_0000673
so part of: LOC112231696
location: join(1480940..1481302,1481986..1482288,1483841..1483930,1484370..1484711,1484947..1485069,1486218..1486352)
location: region:1480940-1486352:1
so has part: feature:1480940-1481302:1:exon
so has part: feature:1481986-1482288:1:exon
so has part: feature:1483841-1483930:1:exon
so has part: feature:1484370-1484711:1:exon
so has part: feature:1484947-1485069:1:exon
so has part: feature:1486218-1486352:1:exon

XP_024254174.1
type: Protein
SIO_000068: ncbiprotein

position:1480940:1
position: 1480940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486352:1
position: 1486352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480940-1481302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481986-1482288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1483841-1483930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1484370-1484711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484947-1485069:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1486218-1486352:1:exon

LOC112231696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: LOC112231696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNFAIP3-interacting protein 2 isoform X2
translation: MTSGIRNMTGIKNTMDVDLDNDTLKSKIRSCHTLTTFYHETRLEIDTLSKKIKKRDNLIADLKARLGKYENTCINVEGYDPVVIAPAESLLESLCKEICKLKLKLKDTEMNAVQQAELRQQEIQRLQQLLREMERELESVIRQSDHEKDQDIQRLRSALAERDRAQATRAVLCTSLAGEADQLRGQLGATVRVCQELLGRLEREKGGERVTEEVKMQQKAKEVEGLNSKWQKYDSSREQYVRYLCQKLNESSALAVSSSPAPGMGHRLGPRPTQEPGPGLGLFPELASAKAGLLQQEIARLNGLLDEKLGDCGRLGRELDESRRRYKDRIQMLEQQVLIYTDDFKSERADRERAQGRIQDLQEEVSRLQEQLHTHAQSPTRDANSTCRVHKGHRISPRMSTDSAESLLRNSANPPVTKIKN
SIO_010081: LOC112231696
subclass of: SO_0000673
so part of: LOC112231696
location: join(1480940..1481302,1481986..1482288,1484370..1484711,1484947..1485069,1486218..1486352)
location: region:1480940-1486352:1
so has part: feature:1480940-1481302:1:exon
so has part: feature:1481986-1482288:1:exon
so has part: feature:1484370-1484711:1:exon
so has part: feature:1484947-1485069:1:exon
so has part: feature:1486218-1486352:1:exon

XP_024254175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480940-1481302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481986-1482288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1484370-1484711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1484947-1485069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486218-1486352:1:exon

fam193a
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: fam193a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1495207..1526308)
location: region:1495207-1526308:-1
so has part: feature:1495207-1526308:-1:exon
subclass of: SO_0000010

112231697
type: Gene
SIO_000068: ncbigene

position:1495207:-1
position: 1495207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526308:-1
position: 1526308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1495207-1526308:-1:exon

fam193a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: fam193a
product: family with sequence similarity 193 member A
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_042311817.1
SIO_010081: fam193a
subclass of: SO_0000673
so part of: fam193a
location: complement(join(1495207..1496212,1496692..1496773,1496935..1497817,1498153..1498404,1498770..1498956,1505014..1505320,1506138..1506470,1507621..1507859,1511070..1511354,1511630..1511782,1512228..1512381,1513184..1513438,1513877..1513989,1514106..1514180,1514431..1514505,1514723..1514870,1515140..1515264,1517153..1517384,1517967..1518134,1521365..1521549,1523144..1523398,1523765..1523839,1525896..1526308))
location: region:1495207-1526308:-1
so has part: feature:1525896-1526308:-1:exon
so has part: feature:1523765-1523839:-1:exon
so has part: feature:1523144-1523398:-1:exon
so has part: feature:1521365-1521549:-1:exon
so has part: feature:1517967-1518134:-1:exon
so has part: feature:1517153-1517384:-1:exon
so has part: feature:1515140-1515264:-1:exon
so has part: feature:1514723-1514870:-1:exon
so has part: feature:1514431-1514505:-1:exon
so has part: feature:1514106-1514180:-1:exon
so has part: feature:1513877-1513989:-1:exon
so has part: feature:1513184-1513438:-1:exon
so has part: feature:1512228-1512381:-1:exon
so has part: feature:1511630-1511782:-1:exon
so has part: feature:1511070-1511354:-1:exon
so has part: feature:1507621-1507859:-1:exon
so has part: feature:1506138-1506470:-1:exon
so has part: feature:1505014-1505320:-1:exon
so has part: feature:1498770-1498956:-1:exon
so has part: feature:1498153-1498404:-1:exon
so has part: feature:1496935-1497817:-1:exon
so has part: feature:1496692-1496773:-1:exon
so has part: feature:1495207-1496212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525896-1526308:-1:exon

position:1525896:-1
position: 1525896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1523765-1523839:-1:exon

position:1523765:-1
position: 1523765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523839:-1
position: 1523839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1523144-1523398:-1:exon

position:1523144:-1
position: 1523144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523398:-1
position: 1523398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1521365-1521549:-1:exon

position:1521365:-1
position: 1521365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521549:-1
position: 1521549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1517967-1518134:-1:exon

position:1517967:-1
position: 1517967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518134:-1
position: 1518134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1517153-1517384:-1:exon

position:1517153:-1
position: 1517153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517384:-1
position: 1517384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1515140-1515264:-1:exon

position:1515140:-1
position: 1515140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515264:-1
position: 1515264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1514723-1514870:-1:exon

position:1514723:-1
position: 1514723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514870:-1
position: 1514870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1514431-1514505:-1:exon

position:1514431:-1
position: 1514431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514505:-1
position: 1514505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1514106-1514180:-1:exon

position:1514106:-1
position: 1514106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514180:-1
position: 1514180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1513877-1513989:-1:exon

position:1513877:-1
position: 1513877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513989:-1
position: 1513989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1513184-1513438:-1:exon

position:1513184:-1
position: 1513184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513438:-1
position: 1513438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1512228-1512381:-1:exon

position:1512228:-1
position: 1512228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512381:-1
position: 1512381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1511630-1511782:-1:exon

position:1511630:-1
position: 1511630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511782:-1
position: 1511782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1511070-1511354:-1:exon

position:1511070:-1
position: 1511070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511354:-1
position: 1511354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1507621-1507859:-1:exon

position:1507621:-1
position: 1507621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507859:-1
position: 1507859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1506138-1506470:-1:exon

position:1506138:-1
position: 1506138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506470:-1
position: 1506470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1505014-1505320:-1:exon

position:1505014:-1
position: 1505014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505320:-1
position: 1505320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1498770-1498956:-1:exon

position:1498770:-1
position: 1498770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498956:-1
position: 1498956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1498153-1498404:-1:exon

position:1498153:-1
position: 1498153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498404:-1
position: 1498404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1496935-1497817:-1:exon

position:1496935:-1
position: 1496935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497817:-1
position: 1497817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1496692-1496773:-1:exon

position:1496692:-1
position: 1496692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496773:-1
position: 1496773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1495207-1496212:-1:exon

position:1496212:-1
position: 1496212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam193a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: fam193a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1507838..1507840),aa:OTHER)
product: LOW QUALITY PROTEIN: protein FAM193A
translation: MSPTDAKRGAKRRKNKRGGGSSSCSSTVCSTSGKAGVSATDLSLQATATPVSTMGFLTSGSSGNGNMGSITGLNGEVSMNGNVTPQFSEGPVNSDFSGVLQTPFTFGLSQRAPYSTTGDRCLLCRSERKPDSTLHPDAMLPGAGPNGMAQPPKSPSALQLPLWVCPDCRRTVEKEDRHASLEQSLVSQDFLLHMPVGNGGLGQELPAAGGRLTNGGTPPTLPTLPVPDLTTPMTADTVCSCEACNERREISAESERESQLLQNHWSEVRYLVRCIYRQTGTPLADDHDQPLDRDKEGMKELVDRLCEKDPYQLYQRLEQQAREYVLEMKVRLLKHLSTGSKAAAAAAQGPPQAHQFISLLLEEYSALCQAARTISGFLLTLENEHLQKFQVTWELHNKHLFENLVFSEPILHSSLPALVAQLRHGTASHDSYSEDMYRTLLESYQQLEQEMAATAAEWQECEKRIDDYVDEQLLFKVEGQNLTNQRTEPHKSLISKNTLKTKQRMLKEDWEFFKQRRFIEEQLTNSKKSLAGDSNFTDTMRMLSSRLSIPDCPNCNYRRRCTCDDCSLSHILTCGIMDSPIAEDLHIKLPLQATEPPQHRDYLAEVHPPSLSSGGSSASASASSSPITIQQHSRLILPEGVATTFGSDEDEVPPLLGKFADIYPMGGYEDPGVVARMNGLHSELNGGGENMALKDESPGGSSSSSSSSEGDEEEADEESGGEPPGQRGQLSPGKSNNSPPPYYPQQQVEQHACECHVCNQDLSSSLAPLGPAPPLSPSRIHTPPSGHHHQFFTGGDNQTPSHPALHLYPHIHGHLPLHNLTHFPAPLHPTLYPSPPFTQHGETLLFCSXPIPLAPTSSHTGPKQQAFSPSLPDHVYQNCFGGGAGDWNSSLQCLSLKFENICDAAMMKNWNPSVLLQEPLPGDMLGSPHHPDVPLPPPSSSSYGDHAHTASAEPTPLHLLPPSPSEQQQPLPRERKNGAKKKCLYNFQDAFLEANKVVMATSASTASVSCTATTVQSSNNHIQVSSKRPNSLGDVFHNIGKEDHRQQPGPIAPRNSPTGLASLPQLSSGPALPPAPGPTAQHHYPSMGSQPFPTTPTTAPGFMEAHHQGMCLSPAEPPDAAPADGAISAPPSVCSDPECEGHRCEGNGAYDHQGYDGEESQDEDSCSEHSSSTSTSTNQKEGKYCDCCYCEFFGHGGPPAAPTSRNYAEMREKLRLRLTKRKEEQPKREEQPAVVERDSGADGIEDHRRVEDLLQFINSASDNKPASSSKAAKRARHKQKKMEEKVRLEAEAREREEEQVQQLLEEEQRRREEEEALQRELLRLQELQHLRSVKKKKEKAKELAAPVPQNNPQPLKQTAQNVLENLRNGKSQLLHSLMRLPGHKDPRVEHRPQPRPPPSQHSPKNSREKAPTPAPFTPNAPNSPAPFLLNGTSVAPQPTEANGKAKPKQQQPIRPTASGTTMVKKAPEATTTNSTQQLPPDVKVTRPRLPAEDPVVPLAPGPRKEERNNGKRQHHQQSVSQVKDERSRPLLEPSPASQTEQPQQNGKPLSAESPQPKVKAKKNKKKKADKTNNSIDDVFLPKDIDLDSTDMDETEREVEYFKRFCLDSARQTRQRLSINWSNFSLKKATFAAH
SIO_010081: fam193a
subclass of: SO_0000673
so part of: fam193a
location: complement(join(1496119..1496212,1496692..1496773,1496935..1497817,1498153..1498404,1498770..1498956,1505014..1505320,1506138..1506470,1507621..1507859,1511070..1511354,1511630..1511782,1512228..1512381,1513184..1513438,1513877..1513989,1514106..1514180,1514431..1514505,1514723..1514870,1515140..1515264,1517153..1517384,1517967..1518134,1521365..1521549,1523144..1523398,1523765..1523839,1525896..1526123))
location: region:1496119-1526123:-1
so has part: feature:1525896-1526123:-1:exon
so has part: feature:1523765-1523839:-1:exon
so has part: feature:1523144-1523398:-1:exon
so has part: feature:1521365-1521549:-1:exon
so has part: feature:1517967-1518134:-1:exon
so has part: feature:1517153-1517384:-1:exon
so has part: feature:1515140-1515264:-1:exon
so has part: feature:1514723-1514870:-1:exon
so has part: feature:1514431-1514505:-1:exon
so has part: feature:1514106-1514180:-1:exon
so has part: feature:1513877-1513989:-1:exon
so has part: feature:1513184-1513438:-1:exon
so has part: feature:1512228-1512381:-1:exon
so has part: feature:1511630-1511782:-1:exon
so has part: feature:1511070-1511354:-1:exon
so has part: feature:1507621-1507859:-1:exon
so has part: feature:1506138-1506470:-1:exon
so has part: feature:1505014-1505320:-1:exon
so has part: feature:1498770-1498956:-1:exon
so has part: feature:1498153-1498404:-1:exon
so has part: feature:1496935-1497817:-1:exon
so has part: feature:1496692-1496773:-1:exon
so has part: feature:1496119-1496212:-1:exon

XP_042167751.1
type: Protein
SIO_000068: ncbiprotein

position:1496119:-1
position: 1496119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526123:-1
position: 1526123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525896-1526123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523765-1523839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523144-1523398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1521365-1521549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1517967-1518134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1517153-1517384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1515140-1515264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1514723-1514870:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514431-1514505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1514106-1514180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1513877-1513989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1513184-1513438:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1512228-1512381:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1511630-1511782:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1511070-1511354:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1507621-1507859:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506138-1506470:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1505014-1505320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1498770-1498956:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1498153-1498404:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1496935-1497817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1496692-1496773:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1496119-1496212:-1:exon

arfip1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1546001..1577201
location: region:1546001-1577201:1
so has part: feature:1546001-1577201:1:exon
subclass of: SO_0000010

112231698
type: Gene
SIO_000068: ncbigene

position:1546001:1
position: 1546001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577201:1
position: 1577201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546001-1577201:1:exon

arfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: arfip1
product: ADP-ribosylation factor interacting protein 1 (arfaptin 1), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398410.2
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1546001..1546166,1548558..1548979,1552903..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1577201)
location: region:1546001-1577201:1
so has part: feature:1546001-1546166:1:exon
so has part: feature:1548558-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1577201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1546001-1546166:1:exon

position:1546166:1
position: 1546166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1548558-1548979:1:exon

position:1548558:1
position: 1548558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548979:1
position: 1548979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1552903-1553001:1:exon

position:1552903:1
position: 1552903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553001:1
position: 1553001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561450-1561549:1:exon

position:1561450:1
position: 1561450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561549:1
position: 1561549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1568101-1568208:1:exon

position:1568101:1
position: 1568101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568208:1
position: 1568208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1569045-1569157:1:exon

position:1569045:1
position: 1569045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569157:1
position: 1569157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1570004-1570225:1:exon

position:1570004:1
position: 1570004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570225:1
position: 1570225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1573003-1573160:1:exon

position:1573003:1
position: 1573003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573160:1
position: 1573160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1573524-1573698:1:exon

position:1573524:1
position: 1573524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573698:1
position: 1573698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1575066-1577201:1:exon

position:1575066:1
position: 1575066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: arfip1
product: ADP-ribosylation factor interacting protein 1 (arfaptin 1), transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398411.2
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1546002..1546166,1548558..1548979,1552903..1553001,1561450..1561549,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1577201)
location: region:1546002-1577201:1
so has part: feature:1546002-1546166:1:exon
so has part: feature:1548558-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1577201:1:exon

position:1546002:1
position: 1546002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546002-1546166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1548558-1548979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1575066-1577201:1:exon

arfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: arfip1
product: ADP-ribosylation factor interacting protein 1 (arfaptin 1), transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398414.2
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1546002..1546166,1552903..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1577201)
location: region:1546002-1577201:1
so has part: feature:1546002-1546166:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1577201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1546002-1546166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568101-1568208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1575066-1577201:1:exon

arfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: arfip1
product: ADP-ribosylation factor interacting protein 1 (arfaptin 1), transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398415.2
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1546003..1546166,1552903..1553001,1561450..1561549,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1577201)
location: region:1546003-1577201:1
so has part: feature:1546003-1546166:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1577201:1:exon

position:1546003:1
position: 1546003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546003-1546166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575066-1577201:1:exon

arfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: arfip1
product: ADP-ribosylation factor interacting protein 1 (arfaptin 1), transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398412.2
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1548277..1548369,1548558..1548979,1552903..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1577201)
location: region:1548277-1577201:1
so has part: feature:1548277-1548369:1:exon
so has part: feature:1548558-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1577201:1:exon

position:1548277:1
position: 1548277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548277-1548369:1:exon

position:1548369:1
position: 1548369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1548558-1548979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1568101-1568208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1575066-1577201:1:exon

arfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1 isoform X1
translation: MSEVSVEAESPAQDLQMDSSKEAQNTEDFQRESEEDAHSFDSTEYVLNNDEVPHGDRAENDSDVQNDNDNAENSDGAQNDVQSDNENTQNSVNAEHDDDVPRTSDNAHSDNAGAKRENCHTVTTDNDTPKKNEDSHTHTKDSTMDEEVHRSPAAEISVTSNGDLEESHEDVFRDPSYGDLNLSEGHIHSGSFASMTEGIIASGPYKVSASQPTSPVAPVAPSSAAASRLARPISDSQTEIQKGTMEGQPQSGPVVLADDLKNPAMEKLDLVRKWSINTYKCTRQILSEKLGRGSRTVDLELEGQIEVLRDNKRKYEHVVKLTQTLANQLTQMMQTQRQLGDAFADLGLKSPELHEEFGYNADTQKLLSKNGETLLGAINFFIANVNTLVDKTIEDTMINIKQYETARIEFDAYRTDLEELNLGPRDATTLPKIEYSQQQFQIHREKYEKMRNDVSIKLKFLEENKVKVLHNQLILFHNAIAAYYAGNQQQLDQTLKQFHIKLKMPGGDTPSWLEEH
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1548560..1548979,1552903..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1575221)
location: region:1548560-1575221:1
so has part: feature:1548560-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1575221:1:exon

XP_024254178.1
type: Protein
SIO_000068: ncbiprotein

position:1548560:1
position: 1548560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575221:1
position: 1575221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548560-1548979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568101-1568208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1575066-1575221:1:exon

arfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1 isoform X1
translation: MSEVSVEAESPAQDLQMDSSKEAQNTEDFQRESEEDAHSFDSTEYVLNNDEVPHGDRAENDSDVQNDNDNAENSDGAQNDVQSDNENTQNSVNAEHDDDVPRTSDNAHSDNAGAKRENCHTVTTDNDTPKKNEDSHTHTKDSTMDEEVHRSPAAEISVTSNGDLEESHEDVFRDPSYGDLNLSEGHIHSGSFASMTEGIIASGPYKVSASQPTSPVAPVAPSSAAASRLARPISDSQTEIQKGTMEGQPQSGPVVLADDLKNPAMEKLDLVRKWSINTYKCTRQILSEKLGRGSRTVDLELEGQIEVLRDNKRKYEHVVKLTQTLANQLTQMMQTQRQLGDAFADLGLKSPELHEEFGYNADTQKLLSKNGETLLGAINFFIANVNTLVDKTIEDTMINIKQYETARIEFDAYRTDLEELNLGPRDATTLPKIEYSQQQFQIHREKYEKMRNDVSIKLKFLEENKVKVLHNQLILFHNAIAAYYAGNQQQLDQTLKQFHIKLKMPGGDTPSWLEEH
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1548560..1548979,1552903..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1575221)
location: region:1548560-1575221:1
so has part: feature:1548560-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1575221:1:exon

XP_024254180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1548560-1548979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568101-1568208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1575066-1575221:1:exon

arfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1 isoform X2
translation: MSEVSVEAESPAQDLQMDSSKEAQNTEDFQRESEEDAHSFDSTEYVLNNDEVPHGDRAENDSDVQNDNDNAENSDGAQNDVQSDNENTQNSVNAEHDDDVPRTSDNAHSDNAGAKRENCHTVTTDNDTPKKNEDSHTHTKDSTMDEEVHRSPAAEISVTSNGDLEESHEDVFRDPSYGDLNLSEGHIHSGSFASMTEGIIASGPYKGTMEGQPQSGPVVLADDLKNPAMEKLDLVRKWSINTYKCTRQILSEKLGRGSRTVDLELEGQIEVLRDNKRKYEHVVKLTQTLANQLTQMMQTQRQLGDAFADLGLKSPELHEEFGYNADTQKLLSKNGETLLGAINFFIANVNTLVDKTIEDTMINIKQYETARIEFDAYRTDLEELNLGPRDATTLPKIEYSQQQFQIHREKYEKMRNDVSIKLKFLEENKVKVLHNQLILFHNAIAAYYAGNQQQLDQTLKQFHIKLKMPGGDTPSWLEEH
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1548560..1548979,1552903..1553001,1561450..1561549,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1575221)
location: region:1548560-1575221:1
so has part: feature:1548560-1548979:1:exon
so has part: feature:1552903-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1575221:1:exon

XP_024254179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1548560-1548979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552903-1553001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575066-1575221:1:exon

arfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1 isoform X3
translation: MDEEVHRSPAAEISVTSNGDLEESHEDVFRDPSYGDLNLSEGHIHSGSFASMTEGIIASGPYKVSASQPTSPVAPVAPSSAAASRLARPISDSQTEIQKGTMEGQPQSGPVVLADDLKNPAMEKLDLVRKWSINTYKCTRQILSEKLGRGSRTVDLELEGQIEVLRDNKRKYEHVVKLTQTLANQLTQMMQTQRQLGDAFADLGLKSPELHEEFGYNADTQKLLSKNGETLLGAINFFIANVNTLVDKTIEDTMINIKQYETARIEFDAYRTDLEELNLGPRDATTLPKIEYSQQQFQIHREKYEKMRNDVSIKLKFLEENKVKVLHNQLILFHNAIAAYYAGNQQQLDQTLKQFHIKLKMPGGDTPSWLEEH
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1552912..1553001,1561450..1561549,1568101..1568208,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1575221)
location: region:1552912-1575221:1
so has part: feature:1552912-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1568101-1568208:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1575221:1:exon

XP_024254182.1
type: Protein
SIO_000068: ncbiprotein

position:1552912:1
position: 1552912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1552912-1553001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568101-1568208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575066-1575221:1:exon

arfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: arfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1 isoform X4
translation: MDEEVHRSPAAEISVTSNGDLEESHEDVFRDPSYGDLNLSEGHIHSGSFASMTEGIIASGPYKGTMEGQPQSGPVVLADDLKNPAMEKLDLVRKWSINTYKCTRQILSEKLGRGSRTVDLELEGQIEVLRDNKRKYEHVVKLTQTLANQLTQMMQTQRQLGDAFADLGLKSPELHEEFGYNADTQKLLSKNGETLLGAINFFIANVNTLVDKTIEDTMINIKQYETARIEFDAYRTDLEELNLGPRDATTLPKIEYSQQQFQIHREKYEKMRNDVSIKLKFLEENKVKVLHNQLILFHNAIAAYYAGNQQQLDQTLKQFHIKLKMPGGDTPSWLEEH
SIO_010081: arfip1
subclass of: SO_0000673
so part of: arfip1
location: join(1552912..1553001,1561450..1561549,1569045..1569157,1570004..1570225,1573003..1573160,1573524..1573698,1575066..1575221)
location: region:1552912-1575221:1
so has part: feature:1552912-1553001:1:exon
so has part: feature:1561450-1561549:1:exon
so has part: feature:1569045-1569157:1:exon
so has part: feature:1570004-1570225:1:exon
so has part: feature:1573003-1573160:1:exon
so has part: feature:1573524-1573698:1:exon
so has part: feature:1575066-1575221:1:exon

XP_024254183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1552912-1553001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561450-1561549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569045-1569157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1570004-1570225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1573003-1573160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1573524-1573698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575066-1575221:1:exon

fhdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: fhdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1586464..1648958
location: region:1586464-1648958:1
so has part: feature:1586464-1648958:1:exon
subclass of: SO_0000010

112231579
type: Gene
SIO_000068: ncbigene

position:1586464:1
position: 1586464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648958:1
position: 1648958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586464-1648958:1:exon

fhdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: fhdc1
product: FH2 domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042312092.1
SIO_010081: fhdc1
subclass of: SO_0000673
so part of: fhdc1
location: join(1586464..1586619,1613872..1614791,1618444..1618505,1625280..1625382,1626393..1626478,1627883..1627983,1632530..1632600,1632888..1632995,1636646..1636716,1641793..1641910,1642363..1642527,1642788..1648958)
location: region:1586464-1648958:1
so has part: feature:1586464-1586619:1:exon
so has part: feature:1613872-1614791:1:exon
so has part: feature:1618444-1618505:1:exon
so has part: feature:1625280-1625382:1:exon
so has part: feature:1626393-1626478:1:exon
so has part: feature:1627883-1627983:1:exon
so has part: feature:1632530-1632600:1:exon
so has part: feature:1632888-1632995:1:exon
so has part: feature:1636646-1636716:1:exon
so has part: feature:1641793-1641910:1:exon
so has part: feature:1642363-1642527:1:exon
so has part: feature:1642788-1648958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586464-1586619:1:exon

position:1586619:1
position: 1586619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613872-1614791:1:exon

position:1613872:1
position: 1613872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614791:1
position: 1614791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1618444-1618505:1:exon

position:1618444:1
position: 1618444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618505:1
position: 1618505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1625280-1625382:1:exon

position:1625280:1
position: 1625280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625382:1
position: 1625382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1626393-1626478:1:exon

position:1626393:1
position: 1626393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626478:1
position: 1626478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1627883-1627983:1:exon

position:1627883:1
position: 1627883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627983:1
position: 1627983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1632530-1632600:1:exon

position:1632530:1
position: 1632530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632600:1
position: 1632600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1632888-1632995:1:exon

position:1632888:1
position: 1632888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632995:1
position: 1632995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1636646-1636716:1:exon

position:1636646:1
position: 1636646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636716:1
position: 1636716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1641793-1641910:1:exon

position:1641793:1
position: 1641793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641910:1
position: 1641910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1642363-1642527:1:exon

position:1642363:1
position: 1642363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642527:1
position: 1642527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1642788-1648958:1:exon

position:1642788:1
position: 1642788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fhdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: fhdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FH2 domain-containing protein 1
translation: MHVMSSPSLANETESCSSECSSAATTTSTTSTTSDLSPMSGHTPHLLISPLPSPTNPLHPTTLPHHYAPPSPPPLPPNAPPPPPPPPPSTSLSSHGVRKKRRVRSFFWKPIPEEKVRGQPNIWTMAVRCQQQYQIDVRSVEELFGQQEEAQGREGVPATGGCSSARITRSRSFKENKDEISILDSKRGMNVGIFLKQFKKSNLSIVEDIRQGDGKLYRADLLKDLLKLLPESEEVKKLREFKGDSSKLTLADSFMYLLIQVPRFELRIEAMVLRDEFFPSCAVMSREIDVIRVATKELMTCEELHAILHLVLQAGNIMNAGGYAGNAVGFKLSSLLSLADTKANKPGMNLLHFVALEAQKKDEKLLKFPEKLQDIQSASRISVENIELEFSSLYVRTRSLEEKVQSDPELLEQLDPFLQSSTRTLQDLKRRRLDLRKEGNALIDFFCEDKDTFMLDECFRIFQDFCLKFKKAVKDNLERELKEMARQRRLRELEEKRFAWNADQQQGAVAGNGGFGRSSSENDVDMLTKEGLLDFLQQRPASPHSPLGRSASARRHRHTVASMADRELHGYLELFGSGAVLPADYANKFNSLPRSGRTLQRRTAPWLVSQDDNRELGNGRQVLATSHRAETEPISPLAMYSSTCFNVNEEPYNNNNNYTTVSEGSYLPRSCHNRNVFQKTPNPGASITAHMNVSVERHTLVPGIQPFDTPSPNNNTNHMHFVDHENVVVTDLERERESPKTLILDTPPPCPKSLERGPEPTVWEGDMASSQFVVGPLQKEEEEDSSTISSTTCDTTLPLDPSVSNKKPVFYILDCTETDCSVALDYSEIESSPLMREGLVPDIKNPDCNNVQGNLQDPSSLSSNSNFDSTSTNDQSISASTNEMLASKSRDERAPSVGSFVTTEEGDTDSWDTAEGRQVGEKAVETYSPKPTHSKNKNVSKVSKNSGVGRSVRMLTTTENQGMRKVVPITKLSRTGSNARRVERPAGSHEGAVPRQPLRDKSTPARGRGEKIGRPPRHSSLPPEETKSQGSTGLSGWACDLNPRKPSFRKPSAKPLRNLPKPPPEAKMCRATMRALAAQAQGQVGAPSEASAPETPTHSSKTPSATLPGWARNTVASSSRTTKKELALALSNPPTPSRSPSLRSRSSSQSQAPARPPAAATTTPPAKGGQHSPRREEKEKAQVGGLQRVQSVKASSRASTQRSDTPPPPPTRERSRKSSSFSEKSVQSITSCRTIKPTWK
SIO_010081: fhdc1
subclass of: SO_0000673
so part of: fhdc1
location: join(1614255..1614791,1618444..1618505,1625280..1625382,1626393..1626478,1627883..1627983,1632530..1632600,1632888..1632995,1636646..1636716,1641793..1641910,1642363..1642527,1642788..1645088)
location: region:1614255-1645088:1
so has part: feature:1614255-1614791:1:exon
so has part: feature:1618444-1618505:1:exon
so has part: feature:1625280-1625382:1:exon
so has part: feature:1626393-1626478:1:exon
so has part: feature:1627883-1627983:1:exon
so has part: feature:1632530-1632600:1:exon
so has part: feature:1632888-1632995:1:exon
so has part: feature:1636646-1636716:1:exon
so has part: feature:1641793-1641910:1:exon
so has part: feature:1642363-1642527:1:exon
so has part: feature:1642788-1645088:1:exon

XP_042168026.1
type: Protein
SIO_000068: ncbiprotein

position:1614255:1
position: 1614255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645088:1
position: 1645088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614255-1614791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1618444-1618505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625280-1625382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626393-1626478:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1627883-1627983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1632530-1632600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1632888-1632995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1636646-1636716:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641793-1641910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642363-1642527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642788-1645088:1:exon

trim2a
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: trim2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1682180..1752956
location: region:1682180-1752956:1
so has part: feature:1682180-1752956:1:exon
subclass of: SO_0000010

112231699
type: Gene
SIO_000068: ncbigene

position:1682180:1
position: 1682180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1752956:1
position: 1752956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1682180-1752956:1:exon

trim2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: trim2a
product: tripartite motif containing 2a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_042311847.1
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1682180..1682359,1726706..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1752956)
location: region:1682180-1752956:1
so has part: feature:1682180-1682359:1:exon
so has part: feature:1726706-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1752956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1682180-1682359:1:exon

position:1682359:1
position: 1682359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726706-1726887:1:exon

position:1726706:1
position: 1726706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726887:1
position: 1726887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1728337-1728577:1:exon

position:1728337:1
position: 1728337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728577:1
position: 1728577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1729089-1729240:1:exon

position:1729089:1
position: 1729089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729240:1
position: 1729240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1731225-1731405:1:exon

position:1731225:1
position: 1731225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731405:1
position: 1731405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1733225-1733948:1:exon

position:1733225:1
position: 1733225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733948:1
position: 1733948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1735277-1735380:1:exon

position:1735277:1
position: 1735277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735380:1
position: 1735380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1738221-1738388:1:exon

position:1738221:1
position: 1738221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738388:1
position: 1738388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1738940-1739120:1:exon

position:1738940:1
position: 1738940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739120:1
position: 1739120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1747178-1747248:1:exon

position:1747178:1
position: 1747178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747248:1
position: 1747248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1749678-1749818:1:exon

position:1749678:1
position: 1749678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1749818:1
position: 1749818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1750271-1752956:1:exon

position:1750271:1
position: 1750271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trim2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: trim2a
product: tripartite motif containing 2a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_042311848.1
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1700791..1700961,1726706..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1752956)
location: region:1700791-1752956:1
so has part: feature:1700791-1700961:1:exon
so has part: feature:1726706-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1752956:1:exon

position:1700791:1
position: 1700791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700791-1700961:1:exon

position:1700961:1
position: 1700961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726706-1726887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1738940-1739120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1750271-1752956:1:exon

trim2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: trim2a
product: tripartite motif containing 2a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_042311846.1
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1723444..1723704,1726706..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1752956)
location: region:1723444-1752956:1
so has part: feature:1723444-1723704:1:exon
so has part: feature:1726706-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1752956:1:exon

position:1723444:1
position: 1723444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723444-1723704:1:exon

position:1723704:1
position: 1723704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726706-1726887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1738940-1739120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1750271-1752956:1:exon

trim2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: trim2a
product: tripartite motif containing 2a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_042311849.1
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1723444..1723704,1726706..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739108,1747178..1747248,1749678..1749818,1750271..1752956)
location: region:1723444-1752956:1
so has part: feature:1723444-1723704:1:exon
so has part: feature:1726706-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739108:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1752956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1723444-1723704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1726706-1726887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1738940-1739108:1:exon

position:1739108:1
position: 1739108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1750271-1752956:1:exon

trim2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: trim2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X1
translation: MASEGSSSIPSPVVRQIDKQFLICSICLDRYDNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQSNFFITNLMDVLQRPPSDSCSQENAVLETISSVATGQPLSCPNHVGNVMEFYCPPCETAMCQDCTSGEHAEHPTVPLKDVVEQHKASLQEQLDAVKNRLPEIDSALQVLSEILQQLTNQKSSIEGDIHTTFDELQKTLNVRKSVLLMELEVNYGLKQKVLQAQLDTLFQGQDGINSSCNFTEQALSHGTEAEVLLVKKQMSERLSELASRELPLQPGENDQLDFMVETEGLKKSIHNLGTIVTTNAVASETVATGEGLRQCVAGLPTSVTITTKDKDGELCKMGKANITAEIATPDGSVGDGEILDNKNGTYEYLYTAPKEGSLTLSLRLYDQHIKGSPFKIKATKSADVSPSTESAKKRLKSPGSSHVKQKAIKRPASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFSNDGLFKSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSDGKFKNKIGSGKLMGPKGVSVDRNGHVIIVDNKACCVFIFQPNGKLVTKFGNRGNGDRQFAGTLNGPHFAAVNHNNEIIVTDFHNHSVKVFNPEGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1726751..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1750423)
location: region:1726751-1750423:1
so has part: feature:1726751-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1750423:1:exon

XP_042167780.1
type: Protein
SIO_000068: ncbiprotein

position:1726751:1
position: 1726751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750423:1
position: 1750423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1726751-1726887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738940-1739120:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1750271-1750423:1:exon

trim2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: trim2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X1
translation: MASEGSSSIPSPVVRQIDKQFLICSICLDRYDNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQSNFFITNLMDVLQRPPSDSCSQENAVLETISSVATGQPLSCPNHVGNVMEFYCPPCETAMCQDCTSGEHAEHPTVPLKDVVEQHKASLQEQLDAVKNRLPEIDSALQVLSEILQQLTNQKSSIEGDIHTTFDELQKTLNVRKSVLLMELEVNYGLKQKVLQAQLDTLFQGQDGINSSCNFTEQALSHGTEAEVLLVKKQMSERLSELASRELPLQPGENDQLDFMVETEGLKKSIHNLGTIVTTNAVASETVATGEGLRQCVAGLPTSVTITTKDKDGELCKMGKANITAEIATPDGSVGDGEILDNKNGTYEYLYTAPKEGSLTLSLRLYDQHIKGSPFKIKATKSADVSPSTESAKKRLKSPGSSHVKQKAIKRPASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFSNDGLFKSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSDGKFKNKIGSGKLMGPKGVSVDRNGHVIIVDNKACCVFIFQPNGKLVTKFGNRGNGDRQFAGTLNGPHFAAVNHNNEIIVTDFHNHSVKVFNPEGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1726751..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1750423)
location: region:1726751-1750423:1
so has part: feature:1726751-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1750423:1:exon

XP_042167781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1726751-1726887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738940-1739120:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1750271-1750423:1:exon

trim2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: trim2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X1
translation: MASEGSSSIPSPVVRQIDKQFLICSICLDRYDNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQSNFFITNLMDVLQRPPSDSCSQENAVLETISSVATGQPLSCPNHVGNVMEFYCPPCETAMCQDCTSGEHAEHPTVPLKDVVEQHKASLQEQLDAVKNRLPEIDSALQVLSEILQQLTNQKSSIEGDIHTTFDELQKTLNVRKSVLLMELEVNYGLKQKVLQAQLDTLFQGQDGINSSCNFTEQALSHGTEAEVLLVKKQMSERLSELASRELPLQPGENDQLDFMVETEGLKKSIHNLGTIVTTNAVASETVATGEGLRQCVAGLPTSVTITTKDKDGELCKMGKANITAEIATPDGSVGDGEILDNKNGTYEYLYTAPKEGSLTLSLRLYDQHIKGSPFKIKATKSADVSPSTESAKKRLKSPGSSHVKQKAIKRPASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFSNDGLFKSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSDGKFKNKIGSGKLMGPKGVSVDRNGHVIIVDNKACCVFIFQPNGKLVTKFGNRGNGDRQFAGTLNGPHFAAVNHNNEIIVTDFHNHSVKVFNPEGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1726751..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739120,1747178..1747248,1749678..1749818,1750271..1750423)
location: region:1726751-1750423:1
so has part: feature:1726751-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739120:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1750423:1:exon

XP_042167782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1726751-1726887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738940-1739120:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1750271-1750423:1:exon

trim2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: trim2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X2
translation: MASEGSSSIPSPVVRQIDKQFLICSICLDRYDNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQSNFFITNLMDVLQRPPSDSCSQENAVLETISSVATGQPLSCPNHVGNVMEFYCPPCETAMCQDCTSGEHAEHPTVPLKDVVEQHKASLQEQLDAVKNRLPEIDSALQVLSEILQQLTNQKSSIEGDIHTTFDELQKTLNVRKSVLLMELEVNYGLKQKVLQAQLDTLFQGQDGINSSCNFTEQALSHGTEAEVLLVKKQMSERLSELASRELPLQPGENDQLDFMVETEGLKKSIHNLGTIVTTNAVASETVATGEGLRQCVAGLPTSVTITTKDKDGELCKMGKANITAEIATPDGSVGDGEILDNKNGTYEYLYTAPKEGSLTLSLRLYDQHIKGSPFKIKATKSADVSPSTESAKKRLKSPGSSHVKQKAIKRPASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFSNDGLFKSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSDGKFKNKIGSGKLMGPKGVSVDRNGHVIIVDNKACCVFIFQPNGKLVTKFGNRGNGDRQFAGPHFAAVNHNNEIIVTDFHNHSVKVFNPEGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: trim2a
subclass of: SO_0000673
so part of: trim2a
location: join(1726751..1726887,1728337..1728577,1729089..1729240,1731225..1731405,1733225..1733948,1735277..1735380,1738221..1738388,1738940..1739108,1747178..1747248,1749678..1749818,1750271..1750423)
location: region:1726751-1750423:1
so has part: feature:1726751-1726887:1:exon
so has part: feature:1728337-1728577:1:exon
so has part: feature:1729089-1729240:1:exon
so has part: feature:1731225-1731405:1:exon
so has part: feature:1733225-1733948:1:exon
so has part: feature:1735277-1735380:1:exon
so has part: feature:1738221-1738388:1:exon
so has part: feature:1738940-1739108:1:exon
so has part: feature:1747178-1747248:1:exon
so has part: feature:1749678-1749818:1:exon
so has part: feature:1750271-1750423:1:exon

XP_042167783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1726751-1726887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728337-1728577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729089-1729240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1731225-1731405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733225-1733948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1735277-1735380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738221-1738388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738940-1739108:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747178-1747248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749678-1749818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1750271-1750423:1:exon

mnd1
type: Gene
subclass of: SO_0000704
RO_0002162: 74940
gene: mnd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1754010..1780066
location: region:1754010-1780066:1
so has part: feature:1754010-1780066:1:exon
subclass of: SO_0000010

112231700
type: Gene
SIO_000068: ncbigene

position:1754010:1
position: 1754010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780066:1
position: 1780066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754010-1780066:1:exon

mnd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74940
gene: mnd1
product: meiotic nuclear divisions 1 homolog (S. cerevisiae)
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024398417.2
SIO_010081: mnd1
subclass of: SO_0000673
so part of: mnd1
location: join(1754010..1754314,1755308..1755373,1756863..1756920,1759253..1759401,1761769..1761843,1763829..1763943,1777960..1778004,1779053..1780066)
location: region:1754010-1780066:1
so has part: feature:1754010-1754314:1:exon
so has part: feature:1755308-1755373:1:exon
so has part: feature:1756863-1756920:1:exon
so has part: feature:1759253-1759401:1:exon
so has part: feature:1761769-1761843:1:exon
so has part: feature:1763829-1763943:1:exon
so has part: feature:1777960-1778004:1:exon
so has part: feature:1779053-1780066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1754010-1754314:1:exon

position:1754314:1
position: 1754314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1755308-1755373:1:exon

position:1755308:1
position: 1755308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755373:1
position: 1755373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1756863-1756920:1:exon

position:1756863:1
position: 1756863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756920:1
position: 1756920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1759253-1759401:1:exon

position:1759253:1
position: 1759253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759401:1
position: 1759401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1761769-1761843:1:exon

position:1761769:1
position: 1761769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761843:1
position: 1761843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1763829-1763943:1:exon

position:1763829:1
position: 1763829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763943:1
position: 1763943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1777960-1778004:1:exon

position:1777960:1
position: 1777960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778004:1
position: 1778004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1779053-1780066:1:exon

position:1779053:1
position: 1779053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mnd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74940
gene: mnd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiotic nuclear division protein 1 homolog
translation: MSKKKGLSHEEKRTRMMEIFFETKEVFQLKDIEKIAPKTKGITPMSVKEVLQSLVDDNMVDCERVGTSNYYWAFPSKALHARKRRLEELDKQHTEAKQRKMSLQQAVDKAKVGREDTEERASLLKELQALREKRSHLKSKLEKYRECDPEVIEEMRKSNVTAKEAVSRWTDNVFAIKSWAKRKFGFEDGRIDKAFGIPEDFDYMD
SIO_010081: mnd1
subclass of: SO_0000673
so part of: mnd1
location: join(1754312..1754314,1755308..1755373,1756863..1756920,1759253..1759401,1761769..1761843,1763829..1763943,1777960..1778004,1779053..1779159)
location: region:1754312-1779159:1
so has part: feature:1754312-1754314:1:exon
so has part: feature:1755308-1755373:1:exon
so has part: feature:1756863-1756920:1:exon
so has part: feature:1759253-1759401:1:exon
so has part: feature:1761769-1761843:1:exon
so has part: feature:1763829-1763943:1:exon
so has part: feature:1777960-1778004:1:exon
so has part: feature:1779053-1779159:1:exon

XP_024254185.1
type: Protein
SIO_000068: ncbiprotein