Mauremys mutica isolate MM-2020 ecotype Southern chromosome 25, ASM2049712v1, whole genome shotgun sequence.
type: Entry
definition: Mauremys mutica isolate MM-2020 ecotype Southern chromosome 25, ASM2049712v1, whole genome shotgun sequence.
sequence version: NC_059096.1
sequence date: 2021-11-06
sequence: sequence
division: CON
label: NC_059096.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA776271
dblink: SAMN19136605
keyword: WGS
keyword: RefSeq
source: Mauremys mutica (yellowpond turtle)
organism: Mauremys mutica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM035657.1.\nAssembly name: ASM2049712v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Institute of Zoology,\nGuangdong Academy of Science on 2021/10/14. The original\nwhole-genome shotgun project has the accession JAHDVG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Institute of Zoology, Guangdong Academy\n of Science\nAssembly Method :: FALCON v. March-2021\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 99.81x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mauremys mutica Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 17190318
topology: linear
so has quality: SO_0000987
location: 1..17190318
location: region:1-17190318:1
RO_0002162: 74926

NC_059096
type: RefSeq
SIO_000068: refseq

PRJNA776271
type: BioProject
SIO_000068: bioproject

SAMN19136605
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17190318:1
position: 17190318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17190318:1:source
so part of: sequence
organism: Mauremys mutica
mol type: genomic DNA
isolate: MM-2020
chromosome: 25
sex: female
tissue type: muscle
dev stage: maturity
ecotype: Southern

74926
type: Taxonomy
SIO_000068: taxonomy

LOC123356230
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9695..22862
location: region:9695-22862:1
so has part: feature:9695-22862:1:exon
subclass of: SO_0000010

123356230
type: Gene
SIO_000068: ncbigene

position:9695:1
position: 9695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22862:1
position: 22862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9695-22862:1:exon

LOC123356230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356230
product: synaptic vesicle membrane protein VAT-1 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999256.1
SIO_010081: LOC123356230
subclass of: SO_0000673
so part of: LOC123356230
location: join(9695..9931,10418..10588,10708..10797,11886..12127,18091..22862)
location: region:9695-22862:1
so has part: feature:9695-9931:1:exon
so has part: feature:10418-10588:1:exon
so has part: feature:10708-10797:1:exon
so has part: feature:11886-12127:1:exon
so has part: feature:18091-22862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9695-9931:1:exon

position:9931:1
position: 9931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10418-10588:1:exon

position:10418:1
position: 10418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10588:1
position: 10588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10708-10797:1:exon

position:10708:1
position: 10708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10797:1
position: 10797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11886-12127:1:exon

position:11886:1
position: 11886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12127:1
position: 12127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18091-22862:1:exon

position:18091:1
position: 18091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle membrane protein VAT-1 homolog
translation: MVLARAGLWQEVVTVPANQTYPMPDGMSFEEAAAFLVNYITAYMILFDFGNLRPNQSVLIHMAAGGVGTAAIQLCKTVENVTIFGTASASKHDALRESGVAHPIDYRSMDYVEEVRKISPKGVDVVLDPLGGSDTTKAFNLLKPMGKLITYGVANLLTGQKKNLMAMAKTWWNQFSINALQLLHLNKAVCGYHLGYMDEEFELIGGVVAKLVSLYNQGKIKPKIDSVWPFEQVADAMRQMQEKKNVGKVILVPELPKEEPKKEEN
SIO_010081: LOC123356230
subclass of: SO_0000673
so part of: LOC123356230
location: join(9739..9931,10418..10588,10708..10797,11886..12127,18091..18192)
location: region:9739-18192:1
so has part: feature:9739-9931:1:exon
so has part: feature:10418-10588:1:exon
so has part: feature:10708-10797:1:exon
so has part: feature:11886-12127:1:exon
so has part: feature:18091-18192:1:exon

XP_044855191.1
type: Protein
SIO_000068: ncbiprotein

position:9739:1
position: 9739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18192:1
position: 18192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9739-9931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10418-10588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10708-10797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11886-12127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18091-18192:1:exon

LOC123356229
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24631..35317)
location: region:24631-35317:-1
so has part: feature:24631-35317:-1:exon
subclass of: SO_0000010

123356229
type: Gene
SIO_000068: ncbigene

position:24631:-1
position: 24631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35317:-1
position: 35317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24631-35317:-1:exon

LOC123356229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356229
product: uncharacterized LOC123356229
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_044999255.1
SIO_010081: LOC123356229
subclass of: SO_0000673
so part of: LOC123356229
location: complement(join(24631..25112,25788..25996,28199..31057,32280..32383,32679..32869,35288..35317))
location: region:24631-35317:-1
so has part: feature:35288-35317:-1:exon
so has part: feature:32679-32869:-1:exon
so has part: feature:32280-32383:-1:exon
so has part: feature:28199-31057:-1:exon
so has part: feature:25788-25996:-1:exon
so has part: feature:24631-25112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35288-35317:-1:exon

position:35288:-1
position: 35288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32679-32869:-1:exon

position:32679:-1
position: 32679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32869:-1
position: 32869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32280-32383:-1:exon

position:32280:-1
position: 32280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32383:-1
position: 32383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28199-31057:-1:exon

position:28199:-1
position: 28199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31057:-1
position: 31057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25788-25996:-1:exon

position:25788:-1
position: 25788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25996:-1
position: 25996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24631-25112:-1:exon

position:25112:-1
position: 25112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC123356229
translation: MAGRTVRVGGIPTDLPPERVADKLTIHFLRARNGGGEIADIALLAGPPACALVTFEEAGVAQRVLEVENHVLLVGGKTYPLTVTAHAAELSPDEIFVRVCMIIDYGRLLDGKTLLRSLRKRYGAVQFSFDPKETLCTVKGPFTELQAFSKELLRSQQAGEAPPEGVSHPATGTGVSASQQRPSSPLPEPRVEKQPSPGHVHEEASEPRLHRDPVDGEAVEQLEDFSLVMDADIYLYMQKFCSDKYQRVLHQHQVDVVDVSSDGIAILYLQASSKNTGDISSVVQARLALLHLYQQLEASLRKEKISKGELSSDMRSQRALLGDLQKLCPLLLCHEDERHLYLIGNLVDVSQAKQYIQDRSPGRTATAGLRTSNGSLATYTAALHGGDARLGKPEPTVDPSPPRLSSGKFEFKGEHKLAANFSFLKHDAALSSARPSLDRSSLFMEQMQLSGSWLKEAGAPGQNDPAPPSGQHHLPVSATITGPAAEVQQRELKDWDRRKGAPLLLRPKTPSLFAGGKASSTLQSLGVWKSPGPVKPQLISSASSAFKSLSLFDTTGTCSALDSKPPESSAPLRRSNSFSIPKSKASDTPRDPSRVSEEISMDPVQWAYLKEIHGSAIDGLCREGGVLLAERSSKGCTVLTLTAEDRTKLLQARWKMEALCQTVCPALVCQSLSYSELDVEGPSDEALNELCSLLKGCSAQVRVSKDRYKLHLMCPKETLLSVNEAFQRFSARRRSALTLSSPSPGLEGSPAEEYPSPTQQVKTQDPALAAEYHHGREGLQQLEVSSTASRSDVSESASQLDGPGWNGTRTSSYQQALGQEDPSYPSDSQDASGSGLLDASLAGRQSLSPGDPQELQKGERPAGEPEMARIKRVLPDRFQFARDKSRGGPSEAGGSPRPPAHAADGPPQSLPIWLFSSGTVLPARAAERAPKPGQGDPAGDGDSQETAISELELRGPSPGQGAHEHKLGRCDACQSSCTATCRAQCGHALCRTCFAAEDTHPACCGSPKSARAIKGTFKVVTLSQSLPGYFRDPTLKIVYDIPDGVQEAGDPRPGRPYRGGRFQAFLPDNREGKKTSQLLQKAFEQGLTFQIQSCDGEERVMWHLIPHKTSFDKGKARNGYPDSQYLREVSALLRNLGIE
SIO_010081: LOC123356229
subclass of: SO_0000673
so part of: LOC123356229
location: complement(join(25043..25112,25788..25996,28199..31057,32280..32383,32679..32856))
location: region:25043-32856:-1
so has part: feature:32679-32856:-1:exon
so has part: feature:32280-32383:-1:exon
so has part: feature:28199-31057:-1:exon
so has part: feature:25788-25996:-1:exon
so has part: feature:25043-25112:-1:exon

XP_044855190.1
type: Protein
SIO_000068: ncbiprotein

position:25043:-1
position: 25043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32856:-1
position: 32856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32679-32856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32280-32383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28199-31057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25788-25996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25043-25112:-1:exon

LOC123356204
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40490..49771)
location: region:40490-49771:-1
so has part: feature:40490-49771:-1:exon
subclass of: SO_0000010

123356204
type: Gene
SIO_000068: ncbigene

position:40490:-1
position: 40490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49771:-1
position: 49771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40490-49771:-1:exon

LOC123356204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356204
product: interferon-induced 35 kDa protein-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999192.1
SIO_010081: LOC123356204
subclass of: SO_0000673
so part of: LOC123356204
location: complement(join(40490..40803,43413..43519,43838..44027,45625..45746,46081..46225,46793..46906,47791..47949,48241..48336,48904..48950,49701..49771))
location: region:40490-49771:-1
so has part: feature:49701-49771:-1:exon
so has part: feature:48904-48950:-1:exon
so has part: feature:48241-48336:-1:exon
so has part: feature:47791-47949:-1:exon
so has part: feature:46793-46906:-1:exon
so has part: feature:46081-46225:-1:exon
so has part: feature:45625-45746:-1:exon
so has part: feature:43838-44027:-1:exon
so has part: feature:43413-43519:-1:exon
so has part: feature:40490-40803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49701-49771:-1:exon

position:49701:-1
position: 49701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48904-48950:-1:exon

position:48904:-1
position: 48904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48950:-1
position: 48950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48241-48336:-1:exon

position:48241:-1
position: 48241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48336:-1
position: 48336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47791-47949:-1:exon

position:47791:-1
position: 47791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47949:-1
position: 47949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46793-46906:-1:exon

position:46793:-1
position: 46793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46906:-1
position: 46906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46081-46225:-1:exon

position:46081:-1
position: 46081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46225:-1
position: 46225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45625-45746:-1:exon

position:45625:-1
position: 45625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45746:-1
position: 45746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43838-44027:-1:exon

position:43838:-1
position: 43838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44027:-1
position: 44027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43413-43519:-1:exon

position:43413:-1
position: 43413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43519:-1
position: 43519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:40490-40803:-1:exon

position:40803:-1
position: 40803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein-like
translation: MTDSEEVTGHQESFVRLPDELTLENSPPEMTPERLQQEIEKCKERCQALEQDRLELGMAKEAAEQKTQGFQREAEFLRGKLEKETSLSRELEPSSQELCLAKAGRDKLLQEKQKLEKELEELEERRVAWEEQAKAPPSLPDRKMFFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEMKQHEVKLDESAGCEGRVRVQAEPVELLLPSALEIELKLSDRCVLLSSLPRLDLSEEQLLDKLELFFSKAKNGGGEVEQRELLRDSGHVVLTFAQDGVAEQLMKKGRIQVPIGKRTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILDEESMRDALEIHFQKPSRGGGEVDALGYVPVGGQGLAVFEEDTD
SIO_010081: LOC123356204
subclass of: SO_0000673
so part of: LOC123356204
location: complement(join(40612..40803,43413..43519,43838..44027,45625..45746,46081..46225,46793..46906,47791..47949,48241..48336,48904..48936))
location: region:40612-48936:-1
so has part: feature:48904-48936:-1:exon
so has part: feature:48241-48336:-1:exon
so has part: feature:47791-47949:-1:exon
so has part: feature:46793-46906:-1:exon
so has part: feature:46081-46225:-1:exon
so has part: feature:45625-45746:-1:exon
so has part: feature:43838-44027:-1:exon
so has part: feature:43413-43519:-1:exon
so has part: feature:40612-40803:-1:exon

XP_044855127.1
type: Protein
SIO_000068: ncbiprotein

position:40612:-1
position: 40612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48936:-1
position: 48936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48904-48936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48241-48336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47791-47949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46793-46906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46081-46225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45625-45746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43838-44027:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43413-43519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40612-40803:-1:exon

LOC123356189
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51045..55832)
location: region:51045-55832:-1
so has part: feature:51045-55832:-1:exon
subclass of: SO_0000010

123356189
type: Gene
SIO_000068: ncbigene

position:51045:-1
position: 51045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55832:-1
position: 55832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51045-55832:-1:exon

LOC123356189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356189
product: 60S ribosomal protein L27
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999159.1
SIO_010081: LOC123356189
subclass of: SO_0000673
so part of: LOC123356189
location: complement(join(51045..51135,52798..52908,53727..53896,55274..55356,55756..55832))
location: region:51045-55832:-1
so has part: feature:55756-55832:-1:exon
so has part: feature:55274-55356:-1:exon
so has part: feature:53727-53896:-1:exon
so has part: feature:52798-52908:-1:exon
so has part: feature:51045-51135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55756-55832:-1:exon

position:55756:-1
position: 55756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55274-55356:-1:exon

position:55274:-1
position: 55274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55356:-1
position: 55356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53727-53896:-1:exon

position:53727:-1
position: 53727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53896:-1
position: 53896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52798-52908:-1:exon

position:52798:-1
position: 52798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52908:-1
position: 52908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51045-51135:-1:exon

position:51135:-1
position: 51135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L27
translation: MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
SIO_010081: LOC123356189
subclass of: SO_0000673
so part of: LOC123356189
location: complement(join(51087..51135,52798..52908,53727..53896,55274..55354))
location: region:51087-55354:-1
so has part: feature:55274-55354:-1:exon
so has part: feature:53727-53896:-1:exon
so has part: feature:52798-52908:-1:exon
so has part: feature:51087-51135:-1:exon

XP_044855094.1
type: Protein
SIO_000068: ncbiprotein

position:51087:-1
position: 51087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55354:-1
position: 55354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55274-55354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53727-53896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52798-52908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51087-51135:-1:exon

LOC123356502
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57951..65165)
location: region:57951-65165:-1
so has part: feature:57951-65165:-1:exon
subclass of: SO_0000010

123356502
type: Gene
SIO_000068: ncbigene

position:57951:-1
position: 57951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65165:-1
position: 65165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57951-65165:-1:exon

LOC123356502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356502
product: RUN domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_044999806.1
SIO_010081: LOC123356502
subclass of: SO_0000673
so part of: LOC123356502
location: complement(join(57951..60022,61007..61120,61461..61659,61951..62109,64830..65165))
location: region:57951-65165:-1
so has part: feature:64830-65165:-1:exon
so has part: feature:61951-62109:-1:exon
so has part: feature:61461-61659:-1:exon
so has part: feature:61007-61120:-1:exon
so has part: feature:57951-60022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64830-65165:-1:exon

position:64830:-1
position: 64830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61951-62109:-1:exon

position:61951:-1
position: 61951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62109:-1
position: 62109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61461-61659:-1:exon

position:61461:-1
position: 61461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61659:-1
position: 61659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61007-61120:-1:exon

position:61007:-1
position: 61007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61120:-1
position: 61120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57951-60022:-1:exon

position:60022:-1
position: 60022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 1-like
translation: MEAEGGALGPGERWAPVGAVAEADEAEGPGGPGSGPGSPGGSPRSLPRLRAERRRLHGALLALVSHFAQVQFRLRQVARAGPAEQQRLLRDLEDFAFRGCPAALGDGLGEAPGERENQERIEARKEKQRELIMQLKTQLDDLETFAYQEGSYDSLPQSMVMERQRVIIEELIKKLDMNLNEDIASLSPEELRQQVDVAVAQIVNPARVKEQLVEQLKTQIRDLEMFISFIQDEVGSPGQVEDGHCECSGRKHGSGPYKPNARLPPRNNRVNPEDARKMRETGLHLMRRMLAVLQIFAVSQFGCATGQIPRTLWQKDQASRDYSPLIKKLELSVDQVRQLALKHQHQDHVLSYSSMQDVSLGARDELTLAVRKELTIAIRDLMAHGLYASSQGMSLVLAPIACLIPAFTSSPQTMHPWELFVKYYNTKNGRAFVESPARKLSQSFALPVTGGITVTPKQSLLTAIHTVLTEHDPFKRSADSELKALVCMALNEQRLVSWVNLICKSGALIQSHYQPWSYMANAGFESALNILSRLSNLKFNLPVDLAVRQLKNIRDAF
SIO_010081: LOC123356502
subclass of: SO_0000673
so part of: LOC123356502
location: complement(join(59157..60022,61007..61120,61461..61659,61951..62109,64830..65165))
location: region:59157-65165:-1
so has part: feature:64830-65165:-1:exon
so has part: feature:61951-62109:-1:exon
so has part: feature:61461-61659:-1:exon
so has part: feature:61007-61120:-1:exon
so has part: feature:59157-60022:-1:exon

XP_044855741.1
type: Protein
SIO_000068: ncbiprotein

position:59157:-1
position: 59157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64830-65165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61951-62109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61461-61659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61007-61120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59157-60022:-1:exon

LOC123356262
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69518..84991
location: region:69518-84991:1
so has part: feature:69518-84991:1:exon
subclass of: SO_0000010

123356262
type: Gene
SIO_000068: ncbigene

position:69518:1
position: 69518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84991:1
position: 84991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69518-84991:1:exon

LOC123356262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356262
product: putative protein PTGES3L, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999345.1
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(69518..69612,71838..71969,72122..72188,72840..72938,73653..73742,75169..75222,76021..76049,76495..77068)
location: region:69518-77068:1
so has part: feature:69518-69612:1:exon
so has part: feature:71838-71969:1:exon
so has part: feature:72122-72188:1:exon
so has part: feature:72840-72938:1:exon
so has part: feature:73653-73742:1:exon
so has part: feature:75169-75222:1:exon
so has part: feature:76021-76049:1:exon
so has part: feature:76495-77068:1:exon

position:77068:1
position: 77068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69518-69612:1:exon

position:69612:1
position: 69612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71838-71969:1:exon

position:71838:1
position: 71838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71969:1
position: 71969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:72122-72188:1:exon

position:72122:1
position: 72122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72188:1
position: 72188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:72840-72938:1:exon

position:72840:1
position: 72840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72938:1
position: 72938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73653-73742:1:exon

position:73653:1
position: 73653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73742:1
position: 73742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75169-75222:1:exon

position:75169:1
position: 75169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75222:1
position: 75222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:76021-76049:1:exon

position:76021:1
position: 76021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76049:1
position: 76049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:76495-77068:1:exon

position:76495:1
position: 76495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356262
product: putative protein PTGES3L, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999346.1
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(69590..69612,71838..71969,72122..72188,72840..72938,73653..73742,75169..75222,77925..78050,78134..78293,79662..79719,80121..80277,80409..80525,81151..81281,81469..81535,81779..81864,82596..82650,83235..83329,83926..84991)
location: region:69590-84991:1
so has part: feature:69590-69612:1:exon
so has part: feature:71838-71969:1:exon
so has part: feature:72122-72188:1:exon
so has part: feature:72840-72938:1:exon
so has part: feature:73653-73742:1:exon
so has part: feature:75169-75222:1:exon
so has part: feature:77925-78050:1:exon
so has part: feature:78134-78293:1:exon
so has part: feature:79662-79719:1:exon
so has part: feature:80121-80277:1:exon
so has part: feature:80409-80525:1:exon
so has part: feature:81151-81281:1:exon
so has part: feature:81469-81535:1:exon
so has part: feature:81779-81864:1:exon
so has part: feature:82596-82650:1:exon
so has part: feature:83235-83329:1:exon
so has part: feature:83926-84991:1:exon

position:69590:1
position: 69590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69590-69612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71838-71969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72122-72188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72840-72938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73653-73742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75169-75222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77925-78050:1:exon

position:77925:1
position: 77925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78050:1
position: 78050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78134-78293:1:exon

position:78134:1
position: 78134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78293:1
position: 78293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79662-79719:1:exon

position:79662:1
position: 79662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79719:1
position: 79719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:80121-80277:1:exon

position:80121:1
position: 80121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80277:1
position: 80277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:80409-80525:1:exon

position:80409:1
position: 80409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80525:1
position: 80525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:81151-81281:1:exon

position:81151:1
position: 81151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81281:1
position: 81281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:81469-81535:1:exon

position:81469:1
position: 81469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81535:1
position: 81535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:81779-81864:1:exon

position:81779:1
position: 81779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81864:1
position: 81864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:82596-82650:1:exon

position:82596:1
position: 82596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82650:1
position: 82650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:83235-83329:1:exon

position:83235:1
position: 83235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83329:1
position: 83329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:83926-84991:1:exon

position:83926:1
position: 83926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like isoform X3
translation: MARVSCLPRQPAKTLWYDRPRYVFLEFCVEDSTDVKVDIDDHRVVFSCKNADGVEMYNEINLYTRVNSKDSQQKRSDRSITCFIRKWKEKVAWPRLTKENIKPVWLFVDFDNWRDWEGDEEAEMAMAEQYAELLQKVTVKGTPPAMDDLDFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIADIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRRRGLPENHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSEVVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(69605..69612,71838..71969,72122..72188,72840..72938,73653..73742,75169..75222,77925..78050,78134..78293,79662..79719,80121..80277,80409..80525,81151..81281,81469..81535,81779..81864,82596..82650,83235..83329,83926..84061)
location: region:69605-84061:1
so has part: feature:69605-69612:1:exon
so has part: feature:71838-71969:1:exon
so has part: feature:72122-72188:1:exon
so has part: feature:72840-72938:1:exon
so has part: feature:73653-73742:1:exon
so has part: feature:75169-75222:1:exon
so has part: feature:77925-78050:1:exon
so has part: feature:78134-78293:1:exon
so has part: feature:79662-79719:1:exon
so has part: feature:80121-80277:1:exon
so has part: feature:80409-80525:1:exon
so has part: feature:81151-81281:1:exon
so has part: feature:81469-81535:1:exon
so has part: feature:81779-81864:1:exon
so has part: feature:82596-82650:1:exon
so has part: feature:83235-83329:1:exon
so has part: feature:83926-84061:1:exon

XP_044855281.1
type: Protein
SIO_000068: ncbiprotein

position:69605:1
position: 69605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84061:1
position: 84061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69605-69612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71838-71969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72122-72188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72840-72938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73653-73742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75169-75222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77925-78050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78134-78293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79662-79719:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80121-80277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:80409-80525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81151-81281:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81469-81535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81779-81864:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82596-82650:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:83235-83329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:83926-84061:1:exon

LOC123356262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein PTGES3L isoform X2
translation: MARVSCLPRQPAKTLWYDRPRYVFLEFCVEDSTDVKVDIDDHRVVFSCKNADGVEMYNEINLYTRVNSKDSQQKRSDRSITCFIRKWKEKVAWPRLTKENIKPVWLFVDFDNWRDWEGDEEAEMAMAEQYAELLQKVTVKGTPPAMDDLDDDI
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(69605..69612,71838..71969,72122..72188,72840..72938,73653..73742,75169..75222,76021..76032)
location: region:69605-76032:1
so has part: feature:69605-69612:1:exon
so has part: feature:71838-71969:1:exon
so has part: feature:72122-72188:1:exon
so has part: feature:72840-72938:1:exon
so has part: feature:73653-73742:1:exon
so has part: feature:75169-75222:1:exon
so has part: feature:76021-76032:1:exon

XP_044855280.1
type: Protein
SIO_000068: ncbiprotein

position:76032:1
position: 76032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69605-69612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71838-71969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72122-72188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72840-72938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73653-73742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75169-75222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76021-76032:1:exon

LOC123356262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356262
product: putative protein PTGES3L, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999342.1
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(77660..77788,77925..78050,78134..78293,79662..79719,80121..80277,80409..80525,81151..81281,81469..81535,81779..81864,82596..82650,83235..83329,83926..84991)
location: region:77660-84991:1
so has part: feature:77660-77788:1:exon
so has part: feature:77925-78050:1:exon
so has part: feature:78134-78293:1:exon
so has part: feature:79662-79719:1:exon
so has part: feature:80121-80277:1:exon
so has part: feature:80409-80525:1:exon
so has part: feature:81151-81281:1:exon
so has part: feature:81469-81535:1:exon
so has part: feature:81779-81864:1:exon
so has part: feature:82596-82650:1:exon
so has part: feature:83235-83329:1:exon
so has part: feature:83926-84991:1:exon

position:77660:1
position: 77660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77660-77788:1:exon

position:77788:1
position: 77788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77925-78050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78134-78293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79662-79719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80121-80277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80409-80525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81151-81281:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:81469-81535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81779-81864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82596-82650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83235-83329:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83926-84991:1:exon

LOC123356262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like isoform X1
translation: MVFQCQRDSWARQFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIADIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRRRGLPENHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSEVVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC123356262
subclass of: SO_0000673
so part of: LOC123356262
location: join(77750..77788,77925..78050,78134..78293,79662..79719,80121..80277,80409..80525,81151..81281,81469..81535,81779..81864,82596..82650,83235..83329,83926..84061)
location: region:77750-84061:1
so has part: feature:77750-77788:1:exon
so has part: feature:77925-78050:1:exon
so has part: feature:78134-78293:1:exon
so has part: feature:79662-79719:1:exon
so has part: feature:80121-80277:1:exon
so has part: feature:80409-80525:1:exon
so has part: feature:81151-81281:1:exon
so has part: feature:81469-81535:1:exon
so has part: feature:81779-81864:1:exon
so has part: feature:82596-82650:1:exon
so has part: feature:83235-83329:1:exon
so has part: feature:83926-84061:1:exon

XP_044855277.1
type: Protein
SIO_000068: ncbiprotein

position:77750:1
position: 77750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77750-77788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77925-78050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78134-78293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79662-79719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80121-80277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80409-80525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81151-81281:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:81469-81535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81779-81864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82596-82650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83235-83329:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83926-84061:1:exon

LOC123356263
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87136..92599)
location: region:87136-92599:-1
so has part: feature:87136-92599:-1:exon
subclass of: SO_0000010

123356263
type: Gene
SIO_000068: ncbigene

position:87136:-1
position: 87136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92599:-1
position: 92599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87136-92599:-1:exon

LOC123356263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356263
product: glucose-6-phosphatase catalytic subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044999347.1
SIO_010081: LOC123356263
subclass of: SO_0000673
so part of: LOC123356263
location: complement(join(87136..88759,89564..89679,91253..91358,91453..91562,92332..92599))
location: region:87136-92599:-1
so has part: feature:92332-92599:-1:exon
so has part: feature:91453-91562:-1:exon
so has part: feature:91253-91358:-1:exon
so has part: feature:89564-89679:-1:exon
so has part: feature:87136-88759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92332-92599:-1:exon

position:92332:-1
position: 92332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91453-91562:-1:exon

position:91453:-1
position: 91453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91562:-1
position: 91562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91253-91358:-1:exon

position:91253:-1
position: 91253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91358:-1
position: 91358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89564-89679:-1:exon

position:89564:-1
position: 89564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89679:-1
position: 89679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87136-88759:-1:exon

position:88759:-1
position: 88759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: MDLLHSAGVQVVQYLQENYQGSQDWFLFISFAADLKTTFFIFFPIWFHLCEAVGVELIWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYGNASTPVIQQFLLTCETGPGSPSGHTMGSAGVCYVMVTALLPCARGTRHGSCAARCRRSLLWLVFWAVQVCVCLSRVFLAAHFPHQVIAGVISGMAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWSVEKAKRWCDRPEWIHIETTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFDLPTDRELLFYVLSFCKSAAAHLCAVALIPYCIAQVLRRGDKKIL
SIO_010081: LOC123356263
subclass of: SO_0000673
so part of: LOC123356263
location: complement(join(88248..88759,89564..89679,91253..91358,91453..91562,92332..92549))
location: region:88248-92549:-1
so has part: feature:92332-92549:-1:exon
so has part: feature:91453-91562:-1:exon
so has part: feature:91253-91358:-1:exon
so has part: feature:89564-89679:-1:exon
so has part: feature:88248-88759:-1:exon

XP_044855282.1
type: Protein
SIO_000068: ncbiprotein

position:88248:-1
position: 88248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92549:-1
position: 92549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92332-92549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91453-91562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91253-91358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89564-89679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88248-88759:-1:exon

LOC123356212
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95240..95808)
location: region:95240-95808:-1
so has part: feature:95240-95808:-1:exon
subclass of: SO_0000010

123356212
type: Gene
SIO_000068: ncbigene

position:95240:-1
position: 95240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95808:-1
position: 95808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95240-95808:-1:exon

LOC123356212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356212
product: glucose-6-phosphatase catalytic subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044999204.1
SIO_010081: LOC123356212
subclass of: SO_0000673
so part of: LOC123356212
location: complement(95240..95808)
location: region:95240-95808:-1
so has part: feature:95240-95808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95240-95808:-1:exon

LOC123356212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: MAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWSVEKAKRWCDRPEWIHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFKPPTKVELLFYVLSFCKSAAVPVAAAGLIPYCVARLIRRQEEKVL
SIO_010081: LOC123356212
subclass of: SO_0000673
so part of: LOC123356212
location: complement(95279..95788)
location: region:95279-95788:-1
so has part: feature:95279-95788:-1:exon

XP_044855139.1
type: Protein
SIO_000068: ncbiprotein

position:95279:-1
position: 95279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95788:-1
position: 95788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95279-95788:-1:exon

LOC123356213
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97756..102401)
location: region:97756-102401:-1
so has part: feature:97756-102401:-1:exon
subclass of: SO_0000010

123356213
type: Gene
SIO_000068: ncbigene

position:97756:-1
position: 97756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102401:-1
position: 102401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97756-102401:-1:exon

LOC123356213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356213
product: glucose-6-phosphatase catalytic subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044999205.1
SIO_010081: LOC123356213
subclass of: SO_0000673
so part of: LOC123356213
location: complement(join(97756..98000,99162..99271,101970..102401))
location: region:97756-102401:-1
so has part: feature:101970-102401:-1:exon
so has part: feature:99162-99271:-1:exon
so has part: feature:97756-98000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101970-102401:-1:exon

position:101970:-1
position: 101970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99162-99271:-1:exon

position:99162:-1
position: 99162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99271:-1
position: 99271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97756-98000:-1:exon

position:98000:-1
position: 98000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: METGMDFIHSSGVQMTRYLQENYQGSQGWFLFISFAADLRNTFFILFPIWFHLCEAVGVELIWVAVIGDWLNLVFKWILFGQRPYWWVRETGYYGNTSSPVIQQFPVTCETGPGSPSGHAMGSAGVCYVMVMALLSTLRRRRRSPFQQQ
SIO_010081: LOC123356213
subclass of: SO_0000673
so part of: LOC123356213
location: complement(join(97891..98000,99162..99271,101970..102199))
location: region:97891-102199:-1
so has part: feature:101970-102199:-1:exon
so has part: feature:99162-99271:-1:exon
so has part: feature:97891-98000:-1:exon

XP_044855140.1
type: Protein
SIO_000068: ncbiprotein

position:97891:-1
position: 97891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102199:-1
position: 102199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101970-102199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99162-99271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97891-98000:-1:exon

LOC123356406
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122554..144266)
location: region:122554-144266:-1
so has part: feature:122554-144266:-1:exon
subclass of: SO_0000010

123356406
type: Gene
SIO_000068: ncbigene

position:122554:-1
position: 122554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144266:-1
position: 144266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122554-144266:-1:exon

LOC123356406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356406
product: G protein-activated inward rectifier potassium channel 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_044999651.1
SIO_010081: LOC123356406
subclass of: SO_0000673
so part of: LOC123356406
location: complement(join(122554..124121,126015..126231,143368..144257))
location: region:122554-144257:-1
so has part: feature:143368-144257:-1:exon
so has part: feature:126015-126231:-1:exon
so has part: feature:122554-124121:-1:exon

position:144257:-1
position: 144257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143368-144257:-1:exon

position:143368:-1
position: 143368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126015-126231:-1:exon

position:126015:-1
position: 126015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126231:-1
position: 126231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122554-124121:-1:exon

position:124121:-1
position: 124121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 1-like isoform X1
translation: MSAVRRHLWDEYQAVGSARGSARRKRQRFVDKNGRCNVQHGNLGGESSRYLSDLFTTLVDLKWRWNLLIFLLTYTVAWLVMASMWWGIAYLRGDLHRAHEQSYQPCVANVYNFPSAFLFFIETEATIGYGHRYITERCPEGIVLFLFQSLLGSIVDAFLIGCMFIKMSQPKKRAETLVFSRAAVISQRDGRLCLMFRVGNLRNSHMVSAQIRCKLIKSRQTPEGEFLPLDQCELDVGFGTGADQLFLVSPLTICHEINPKSPFFCLSQRSLRSEQFEIVVILEGIVETTGMTCQARTSYTEDEVLWGHRFLPVMSLEDGFFRVDYSQFHATFEVPTPPYSVKQQEESLSLPSPFNTPIGNNRNRREHICSLDCIDILEEKTNKFPSKLQKLSSRKEGLQRRVLRMSSSNVEKACSTGDLLKIQQISSVPSNEDGDERIQLKAFRIKSESLTQSTGDLELQKKPQGMLTLGTRLEDNLPAKLRKMNSDRLS
SIO_010081: LOC123356406
subclass of: SO_0000673
so part of: LOC123356406
location: complement(join(123517..124121,126015..126231,143368..144018))
location: region:123517-144018:-1
so has part: feature:143368-144018:-1:exon
so has part: feature:126015-126231:-1:exon
so has part: feature:123517-124121:-1:exon

XP_044855586.1
type: Protein
SIO_000068: ncbiprotein

position:123517:-1
position: 123517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144018:-1
position: 144018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143368-144018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126015-126231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123517-124121:-1:exon

LOC123356406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356406
product: G protein-activated inward rectifier potassium channel 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_044999652.1
SIO_010081: LOC123356406
subclass of: SO_0000673
so part of: LOC123356406
location: complement(join(124042..124121,126015..126076,126189..126231,143368..144266))
location: region:124042-144266:-1
so has part: feature:143368-144266:-1:exon
so has part: feature:126189-126231:-1:exon
so has part: feature:126015-126076:-1:exon
so has part: feature:124042-124121:-1:exon

position:124042:-1
position: 124042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143368-144266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126189-126231:-1:exon

position:126189:-1
position: 126189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126015-126076:-1:exon

position:126076:-1
position: 126076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124042-124121:-1:exon

LOC123356406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 1-like isoform X2
translation: MSAVRRHLWDEYQAVGSARGSARRKRQRFVDKNGRCNVQHGNLGGESSRYLSDLFTTLVDLKWRWNLLIFLLTYTVAWLVMASMWWGIAYLRGDLHRAHEQSYQPCVANVYNFPSAFLFFIETEATIGYGHRYITERCPEGIVLFLFQSLLGSIVDAFLIGCMFIKMSQPKKRAETLVFSRAAVISQRDGRLCLMFRVGNLRNSHMVSAQIRCKLIKSRQTPEGEFLPLDQYR
SIO_010081: LOC123356406
subclass of: SO_0000673
so part of: LOC123356406
location: complement(join(126069..126076,126189..126231,143368..144018))
location: region:126069-144018:-1
so has part: feature:143368-144018:-1:exon
so has part: feature:126189-126231:-1:exon
so has part: feature:126069-126076:-1:exon

XP_044855587.1
type: Protein
SIO_000068: ncbiprotein

position:126069:-1
position: 126069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143368-144018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126189-126231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126069-126076:-1:exon

MPP3
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: MPP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 152154..201013
location: region:152154-201013:1
so has part: feature:152154-201013:1:exon
subclass of: SO_0000010

123356407
type: Gene
SIO_000068: ncbigene

position:152154:1
position: 152154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201013:1
position: 201013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152154-201013:1:exon

MPP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: MPP3
product: MAGUK p55 scaffold protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044999653.1
SIO_010081: MPP3
subclass of: SO_0000673
so part of: MPP3
location: join(152154..152256,161242..161349,165268..165386,167254..167331,169031..169111,172387..172524,175004..175085,176745..176830,178104..178178,179642..179838,184335..184399,185882..185902,187947..187988,188498..188653,189249..189329,193341..193434,194864..194972,198652..198771,200501..201013)
location: region:152154-201013:1
so has part: feature:152154-152256:1:exon
so has part: feature:161242-161349:1:exon
so has part: feature:165268-165386:1:exon
so has part: feature:167254-167331:1:exon
so has part: feature:169031-169111:1:exon
so has part: feature:172387-172524:1:exon
so has part: feature:175004-175085:1:exon
so has part: feature:176745-176830:1:exon
so has part: feature:178104-178178:1:exon
so has part: feature:179642-179838:1:exon
so has part: feature:184335-184399:1:exon
so has part: feature:185882-185902:1:exon
so has part: feature:187947-187988:1:exon
so has part: feature:188498-188653:1:exon
so has part: feature:189249-189329:1:exon
so has part: feature:193341-193434:1:exon
so has part: feature:194864-194972:1:exon
so has part: feature:198652-198771:1:exon
so has part: feature:200501-201013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152154-152256:1:exon

position:152256:1
position: 152256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161242-161349:1:exon

position:161242:1
position: 161242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161349:1
position: 161349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165268-165386:1:exon

position:165268:1
position: 165268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165386:1
position: 165386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167254-167331:1:exon

position:167254:1
position: 167254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167331:1
position: 167331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169031-169111:1:exon

position:169031:1
position: 169031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169111:1
position: 169111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:172387-172524:1:exon

position:172387:1
position: 172387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172524:1
position: 172524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175004-175085:1:exon

position:175004:1
position: 175004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175085:1
position: 175085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176745-176830:1:exon

position:176745:1
position: 176745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176830:1
position: 176830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:178104-178178:1:exon

position:178104:1
position: 178104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178178:1
position: 178178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179642-179838:1:exon

position:179642:1
position: 179642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179838:1
position: 179838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:184335-184399:1:exon

position:184335:1
position: 184335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184399:1
position: 184399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:185882-185902:1:exon

position:185882:1
position: 185882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185902:1
position: 185902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:187947-187988:1:exon

position:187947:1
position: 187947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187988:1
position: 187988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:188498-188653:1:exon

position:188498:1
position: 188498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188653:1
position: 188653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:189249-189329:1:exon

position:189249:1
position: 189249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189329:1
position: 189329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:193341-193434:1:exon

position:193341:1
position: 193341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193434:1
position: 193434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:194864-194972:1:exon

position:194864:1
position: 194864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194972:1
position: 194972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:198652-198771:1:exon

position:198652:1
position: 198652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198771:1
position: 198771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:200501-201013:1:exon

position:200501:1
position: 200501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: MPP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 3
translation: MPVLSEDSGLHETLALLTSQLRPDSNHKEEMGFLRDVFSEKSLSYLMKIHEKLRHYERQSPTPVLHSASALAEDVIEELQTTPVNNEEKELLQLLSTPHLRAMLVVHDTVAQKNFDPVLPPLPDNIDDDFDEESVKIVRLVKNKEPLGATIRRDENTGAVIVARIMRGGAADRSGLVHVGDELKEVNGIAVLHKRPEEISQILAQSQGSITLKIIPAIKEEDRLKDSKVFMRALFCYNPKEDKAIPCQEAGLPFKRRHILEVVSQDDPTWWQAKRVGDNNLRAGLIPSKQFQERRLNYRRTIGTLQNSKTVKKPLYDQSSEKEDCDCEGYFNGQYIAGLRRSFRLSRKEKHNNQNQAKQADISEFLTYEEVTKYQHQPGEKQRLVVLIGSLGARLNELKQKVVSENPQEYGVAVPHTTRSKKSHEKEGVEYNFVSKQSFEIDVQHNKFVEHGEYKENLYGTSLEAIQSVMAKNKVCLVDVVPEAVKHLRTPEFKPYVIFVKPLVPEKKKNAPSPASEEISAPLDEEQQDIINSAAFIEDQYGHLIDTVLLKEDLQSAYNQLKTLLEKLKEDSFWVPVSWVRS
SIO_010081: MPP3
subclass of: SO_0000673
so part of: MPP3
location: join(161325..161349,165268..165386,167254..167331,169031..169111,172387..172524,175004..175085,176745..176830,178104..178178,179642..179838,184335..184399,185882..185902,187947..187988,188498..188653,189249..189329,193341..193434,194864..194972,198652..198771,200501..200680)
location: region:161325-200680:1
so has part: feature:161325-161349:1:exon
so has part: feature:165268-165386:1:exon
so has part: feature:167254-167331:1:exon
so has part: feature:169031-169111:1:exon
so has part: feature:172387-172524:1:exon
so has part: feature:175004-175085:1:exon
so has part: feature:176745-176830:1:exon
so has part: feature:178104-178178:1:exon
so has part: feature:179642-179838:1:exon
so has part: feature:184335-184399:1:exon
so has part: feature:185882-185902:1:exon
so has part: feature:187947-187988:1:exon
so has part: feature:188498-188653:1:exon
so has part: feature:189249-189329:1:exon
so has part: feature:193341-193434:1:exon
so has part: feature:194864-194972:1:exon
so has part: feature:198652-198771:1:exon
so has part: feature:200501-200680:1:exon

XP_044855588.1
type: Protein
SIO_000068: ncbiprotein

position:161325:1
position: 161325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200680:1
position: 200680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161325-161349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165268-165386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167254-167331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169031-169111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172387-172524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175004-175085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176745-176830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178104-178178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179642-179838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184335-184399:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:185882-185902:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187947-187988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188498-188653:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189249-189329:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193341-193434:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:194864-194972:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:198652-198771:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200501-200680:1:exon

LOC123356408
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356408
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171462..185017)
location: region:171462-185017:-1
so has part: feature:171462-185017:-1:exon
subclass of: SO_0000011

123356408
type: Gene
SIO_000068: ncbigene

position:171462:-1
position: 171462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185017:-1
position: 185017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171462-185017:-1:exon

LOC123356408
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74926
nc RNA class: lncRNA
gene: LOC123356408
product: uncharacterized LOC123356408
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006575354.1
SIO_010081: LOC123356408
subclass of: SO_0000673
so part of: LOC123356408
location: complement(join(171462..171887,171994..172072,174796..174892,184955..185017))
location: region:171462-185017:-1
so has part: feature:184955-185017:-1:exon
so has part: feature:174796-174892:-1:exon
so has part: feature:171994-172072:-1:exon
so has part: feature:171462-171887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184955-185017:-1:exon

position:184955:-1
position: 184955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174796-174892:-1:exon

position:174796:-1
position: 174796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174892:-1
position: 174892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171994-172072:-1:exon

position:171994:-1
position: 171994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172072:-1
position: 172072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171462-171887:-1:exon

position:171887:-1
position: 171887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP97D1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(204758..220335)
location: region:204758-220335:-1
so has part: feature:204758-220335:-1:exon
subclass of: SO_0000010

123356241
type: Gene
SIO_000068: ncbigene

position:204758:-1
position: 204758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220335:-1
position: 220335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204758-220335:-1:exon

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_044999293.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(204758..205712,206774..206833,219925..219980,220076..220335))
location: region:204758-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:206774-206833:-1:exon
so has part: feature:204758-205712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

position:220076:-1
position: 220076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

position:219925:-1
position: 219925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219980:-1
position: 219980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206774-206833:-1:exon

position:206774:-1
position: 206774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206833:-1
position: 206833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204758-205712:-1:exon

position:205712:-1
position: 205712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_044999292.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(204758..205712,206774..206833,212343..212466,214379..214434,214916..214986,219925..219980,220076..220335))
location: region:204758-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214379-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon
so has part: feature:204758-205712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214916-214986:-1:exon

position:214916:-1
position: 214916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214986:-1
position: 214986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214379-214434:-1:exon

position:214379:-1
position: 214379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214434:-1
position: 214434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212343-212466:-1:exon

position:212343:-1
position: 212343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212466:-1
position: 212466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206774-206833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204758-205712:-1:exon

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_044999291.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(204758..205712,206774..206833,212343..212466,214316..214434,214916..214986,219925..219980,220076..220335))
location: region:204758-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214316-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon
so has part: feature:204758-205712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214916-214986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214434:-1:exon

position:214316:-1
position: 214316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212343-212466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206774-206833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204758-205712:-1:exon

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_044999294.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(204764..205712,206774..206833,212343..212466,214316..214434,214916..214986,219347..219557))
location: region:204764-219557:-1
so has part: feature:219347-219557:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214316-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon
so has part: feature:204764-205712:-1:exon

position:204764:-1
position: 204764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219557:-1
position: 219557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219347-219557:-1:exon

position:219347:-1
position: 219347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214916-214986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214316-214434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212343-212466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206774-206833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204764-205712:-1:exon

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm axonemal maintenance protein CFAP97D1 isoform X3
translation: MERCVSNAGPWNVVYRTLYRIGPGRARMALSGPFPTGPREEALGRDSGAELGHRPPVSAGAEAAAQGPAMATLKLLVLGDSAVGKSSLLLRFTDDTFEPHLNPTIEFTALYPEYHTVSHCFSGQLGDYTRHG
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(205690..205712,206774..206833,219925..219980,220076..220335))
location: region:205690-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:206774-206833:-1:exon
so has part: feature:205690-205712:-1:exon

XP_044855228.1
type: Protein
SIO_000068: ncbiprotein

position:205690:-1
position: 205690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206774-206833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205690-205712:-1:exon

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm axonemal maintenance protein CFAP97D1 isoform X2
translation: MERCVSNAGPWNVVYRTLYRIGPGRARMALSGPFPTGPREEALGRDSGAELGHRPPVSAGAEAAAQGPAMATLKLLVLGDSAVGKSSLLLRFTDDTFEPHLNPTIARPRVDNKPPRAQTHHHFKMSKIQEDQKRTGRIERENKQLAESSNREKQNREMVRITVENQGILKRLGDPKPTYDRRKSEIDWQNSRHYIRNTTRYLIASRDS
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(206774..206833,212343..212466,214379..214434,214916..214986,219925..219980,220076..220335))
location: region:206774-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214379-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon

XP_044855227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214916-214986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214379-214434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212343-212466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206774-206833:-1:exon

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm axonemal maintenance protein CFAP97D1 isoform X1
translation: MERCVSNAGPWNVVYRTLYRIGPGRARMALSGPFPTGPREEALGRDSGAELGHRPPVSAGAEAAAQGPAMATLKLLVLGDSAVGKSSLLLRFTDDTFEPHLNPTIARPRVDNKPPRAQTHHHFKMSKIQEDQKRTGRIERENKQLAERLATIQRGTGMVDCWNEYFQRSSNREKQNREMVRITVENQGILKRLGDPKPTYDRRKSEIDWQNSRHYIRNTTRYLIASRDS
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(206774..206833,212343..212466,214316..214434,214916..214986,219925..219980,220076..220335))
location: region:206774-220335:-1
so has part: feature:220076-220335:-1:exon
so has part: feature:219925-219980:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214316-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon

XP_044855226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220076-220335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219925-219980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214916-214986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212343-212466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206774-206833:-1:exon

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm axonemal maintenance protein CFAP97D1 isoform X4
translation: MSSLEYLAYPVIVANHRQSTTMKKKLDIGDYLSHKNKLELARPRVDNKPPRAQTHHHFKMSKIQEDQKRTGRIERENKQLAERLATIQRGTGMVDCWNEYFQRSSNREKQNREMVRITVENQGILKRLGDPKPTYDRRKSEIDWQNSRHYIRNTTRYLIASRDS
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(206774..206833,212343..212466,214316..214434,214916..214986,219347..219467))
location: region:206774-219467:-1
so has part: feature:219347-219467:-1:exon
so has part: feature:214916-214986:-1:exon
so has part: feature:214316-214434:-1:exon
so has part: feature:212343-212466:-1:exon
so has part: feature:206774-206833:-1:exon

XP_044855229.1
type: Protein
SIO_000068: ncbiprotein

position:219467:-1
position: 219467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219347-219467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214916-214986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214316-214434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212343-212466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206774-206833:-1:exon

DUSP3
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: DUSP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220509..241229
location: region:220509-241229:1
so has part: feature:220509-241229:1:exon
subclass of: SO_0000010

123356242
type: Gene
SIO_000068: ncbigene

position:220509:1
position: 220509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241229:1
position: 241229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220509-241229:1:exon

DUSP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: DUSP3
product: dual specificity phosphatase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999296.1
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(220509..220737,229254..229373,230931..231157,236011..241229)
location: region:220509-241229:1
so has part: feature:220509-220737:1:exon
so has part: feature:229254-229373:1:exon
so has part: feature:230931-231157:1:exon
so has part: feature:236011-241229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220509-220737:1:exon

position:220737:1
position: 220737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229254-229373:1:exon

position:229254:1
position: 229254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229373:1
position: 229373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230931-231157:1:exon

position:230931:1
position: 230931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231157:1
position: 231157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236011-241229:1:exon

position:236011:1
position: 236011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUSP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: DUSP3
product: dual specificity phosphatase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999297.1
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(220509..220737,230931..231157,236011..241228)
location: region:220509-241228:1
so has part: feature:220509-220737:1:exon
so has part: feature:230931-231157:1:exon
so has part: feature:236011-241228:1:exon

position:241228:1
position: 241228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220509-220737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230931-231157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236011-241228:1:exon

DUSP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: DUSP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 3 isoform X1
translation: MSDCQISVEELNELLANGSGCYSLPSAHSNEVAPRIHVGNARGLWRWRNNYPEQPPEFVQSKRKDLSHFKVFSFTPACSWRFIAKNIMRLQRLGITHILNAAEGKSFMHVNTNAEFYEGTGITYHGIKANDTQEFNLSRYFEEAADFIDSALSQKDGRVFVHCREGYSRSPTLVIAYLMLRQNMDVKSAVSAVRQKREIGPNDGFLKQLCQLNERLVKEGKLKP
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(220616..220737,229254..229373,230931..231157,236011..236216)
location: region:220616-236216:1
so has part: feature:220616-220737:1:exon
so has part: feature:229254-229373:1:exon
so has part: feature:230931-231157:1:exon
so has part: feature:236011-236216:1:exon

XP_044855231.1
type: Protein
SIO_000068: ncbiprotein

position:220616:1
position: 220616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236216:1
position: 236216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220616-220737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229254-229373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230931-231157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236011-236216:1:exon

DUSP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: DUSP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 3 isoform X2
translation: MSDCQISVEELNELLANGSGCYSLPSAHSNEVAPRIHVGNAFIAKNIMRLQRLGITHILNAAEGKSFMHVNTNAEFYEGTGITYHGIKANDTQEFNLSRYFEEAADFIDSALSQKDGRVFVHCREGYSRSPTLVIAYLMLRQNMDVKSAVSAVRQKREIGPNDGFLKQLCQLNERLVKEGKLKP
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(220616..220737,230931..231157,236011..236216)
location: region:220616-236216:1
so has part: feature:220616-220737:1:exon
so has part: feature:230931-231157:1:exon
so has part: feature:236011-236216:1:exon

XP_044855232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220616-220737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230931-231157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236011-236216:1:exon

SOST
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: SOST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250130..256276
location: region:250130-256276:1
so has part: feature:250130-256276:1:exon
subclass of: SO_0000010

123356472
type: Gene
SIO_000068: ncbigene

position:250130:1
position: 250130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256276:1
position: 256276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250130-256276:1:exon

SOST
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: SOST
product: sclerostin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_044999755.1
SIO_010081: SOST
subclass of: SO_0000673
so part of: SOST
location: join(250130..250376,254440..256276)
location: region:250130-256276:1
so has part: feature:250130-250376:1:exon
so has part: feature:254440-256276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250130-250376:1:exon

position:250376:1
position: 250376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254440-256276:1:exon

position:254440:1
position: 254440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOST
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: SOST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sclerostin
translation: MQISWALCSICVLIQIAVRSVEGWQVFKNDATEIIPEIPENTETPVEQTNSNNNTMNQAKHGGRQPQPSLDPNDASDFSCRELRYTRYVIDGPCRSFKPIKELVCSGQCFPSHLLPNSIGRGKWWRQNALDYRCIPAHARTQRIQLACPQEETRTYKIRAVTACKCKRYTRYHNQSELKDFGKETIRPQKNKKPRLSRARGSKSNQPELENAY
SIO_010081: SOST
subclass of: SO_0000673
so part of: SOST
location: join(250157..250376,254440..254861)
location: region:250157-254861:1
so has part: feature:250157-250376:1:exon
so has part: feature:254440-254861:1:exon

XP_044855690.1
type: Protein
SIO_000068: ncbiprotein

position:250157:1
position: 250157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254861:1
position: 254861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250157-250376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254440-254861:1:exon

MEOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: MEOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 319527..333436
location: region:319527-333436:1
so has part: feature:319527-333436:1:exon
subclass of: SO_0000010

123356174
type: Gene
SIO_000068: ncbigene

position:319527:1
position: 319527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333436:1
position: 333436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319527-333436:1:exon

MEOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: MEOX1
product: mesenchyme homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_044999128.1
SIO_010081: MEOX1
subclass of: SO_0000673
so part of: MEOX1
location: join(319527..319977,331141..331313,333314..333436)
location: region:319527-333436:1
so has part: feature:319527-319977:1:exon
so has part: feature:331141-331313:1:exon
so has part: feature:333314-333436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319527-319977:1:exon

position:319977:1
position: 319977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331141-331313:1:exon

position:331141:1
position: 331141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331313:1
position: 331313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333314-333436:1:exon

position:333314:1
position: 333314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: MEOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein MOX-1
translation: MDPSVSSCMRSPRPTTPLWGCLRNAHSELSTAAGAHHYPQAPFSFHQKPDFAAYSDFSASCLATAPHSFPREERMFAEQHPSFQHSDWHFAASEARRRLNPGLALGSGELESSSPNLVAAAGGMNEDYGVPGNTTNETEKKASKRKKETSENQDSSRKPEASSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQPVSPHEHDTEDMDSAASPSSE
SIO_010081: MEOX1
subclass of: SO_0000673
so part of: MEOX1
location: join(319527..319977,331141..331313,333314..333436)
location: region:319527-333436:1
so has part: feature:319527-319977:1:exon
so has part: feature:331141-331313:1:exon
so has part: feature:333314-333436:1:exon

XP_044855063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319527-319977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331141-331313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333314-333436:1:exon

ETV4
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 391032..435255
location: region:391032-435255:1
so has part: feature:391032-435255:1:exon
subclass of: SO_0000010

123356517
type: Gene
SIO_000068: ncbigene

position:391032:1
position: 391032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435255:1
position: 435255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391032-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_044999839.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

position:391161:1
position: 391161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

position:391535:1
position: 391535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391637:1
position: 391637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

position:391769:1
position: 391769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391862:1
position: 391862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

position:392124:1
position: 392124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392171:1
position: 392171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

position:410647:1
position: 410647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410700:1
position: 410700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418769-418895:1:exon

position:418769:1
position: 418769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418895:1
position: 418895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

position:420492:1
position: 420492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420650:1
position: 420650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

position:421070:1
position: 421070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421320:1
position: 421320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:427331-427405:1:exon

position:427331:1
position: 427331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427405:1
position: 427405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:427518-427586:1:exon

position:427518:1
position: 427518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427586:1
position: 427586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:429117-429289:1:exon

position:429117:1
position: 429117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429289:1
position: 429289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:430597-430698:1:exon

position:430597:1
position: 430597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430698:1
position: 430698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:431669-435255:1:exon

position:431669:1
position: 431669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_044999840.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427331..427405,427518..427586,429120..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429120-429289:1:exon

position:429120:1
position: 429120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999843.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427518..427586,429117..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999844.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427518..427586,429120..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429120-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999845.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418769..418895,420576..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420576-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420576-420650:1:exon

position:420576:1
position: 420576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_044999841.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418772..418895,420492..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418772-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418772-418895:1:exon

position:418772:1
position: 418772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_044999842.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391032..391161,391535..391637,391769..391862,392124..392171,410647..410700,418772..418895,420492..420650,421070..421320,427331..427405,427518..427586,429120..429289,430597..430698,431669..435255)
location: region:391032-435255:1
so has part: feature:391032-391161:1:exon
so has part: feature:391535-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418772-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391032-391161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391535-391637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418772-418895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429120-429289:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X1
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855774.1
type: Protein
SIO_000068: ncbiprotein

position:391560:1
position: 391560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431890:1
position: 431890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X2
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427331..427405,427518..427586,429120..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429120-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X5
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427518..427586,429117..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X6
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSGYGYNKQMRPFADDVCVVPEKFEGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418769..418895,420492..420650,421070..421320,427518..427586,429120..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429120-429289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X7
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYARQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418769..418895,420576..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420576-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420576-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X3
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENSFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418772..418895,420492..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418772-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418772-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X4
translation: MPTRSSHADGRMKGYLDQQVPYTFTHKPPGNGTLSSRALMGARRPMDPGLAPLQDSEDLFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENSFHSPPAKVKKEPQSPCSDPALSCSHKQPFRYRNGEQCLYASAYDQTRQVGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(391560..391637,391769..391862,392124..392171,410647..410700,418772..418895,420492..420650,421070..421320,427331..427405,427518..427586,429120..429289,430597..430698,431669..431890)
location: region:391560-431890:1
so has part: feature:391560-391637:1:exon
so has part: feature:391769-391862:1:exon
so has part: feature:392124-392171:1:exon
so has part: feature:410647-410700:1:exon
so has part: feature:418772-418895:1:exon
so has part: feature:420492-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429120-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391560-391637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391769-391862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392124-392171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410647-410700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418772-418895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420492-420650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429120-429289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431669-431890:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999846.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(415113..415147,418769..418895,420576..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..435255)
location: region:415113-435255:1
so has part: feature:415113-415147:1:exon
so has part: feature:418769-418895:1:exon
so has part: feature:420576-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-435255:1:exon

position:415113:1
position: 415113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415113-415147:1:exon

position:415147:1
position: 415147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418769-418895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420576-420650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431669-435255:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X8
translation: MEHSSVYQPPTEMCRSFPSSQGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQASQLGSSSDHRYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQAYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(420640..420650,421070..421320,427331..427405,427518..427586,429117..429289,430597..430698,431669..431890)
location: region:420640-431890:1
so has part: feature:420640-420650:1:exon
so has part: feature:421070-421320:1:exon
so has part: feature:427331-427405:1:exon
so has part: feature:427518-427586:1:exon
so has part: feature:429117-429289:1:exon
so has part: feature:430597-430698:1:exon
so has part: feature:431669-431890:1:exon

XP_044855781.1
type: Protein
SIO_000068: ncbiprotein

position:420640:1
position: 420640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420640-420650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421070-421320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427331-427405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427518-427586:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429117-429289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430597-430698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431669-431890:1:exon

DHX8
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: DHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449582..467646)
location: region:449582-467646:-1
so has part: feature:449582-467646:-1:exon
subclass of: SO_0000010

123356419
type: Gene
SIO_000068: ncbigene

position:449582:-1
position: 449582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467646:-1
position: 467646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449582-467646:-1:exon

DHX8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: DHX8
product: DEAH-box helicase 8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999663.1
SIO_010081: DHX8
subclass of: SO_0000673
so part of: DHX8
location: complement(join(449582..450866,451451..451630,451797..451993,453442..453570,454082..454219,454987..455142,455444..455584,456283..456464,456653..456863,457454..457639,457880..458074,458481..458662,459059..459206,459801..459898,460263..460350,461171..461374,462609..462753,463124..463435,463540..463649,464654..464739,465154..465226,465829..465914,467500..467646))
location: region:449582-467646:-1
so has part: feature:467500-467646:-1:exon
so has part: feature:465829-465914:-1:exon
so has part: feature:465154-465226:-1:exon
so has part: feature:464654-464739:-1:exon
so has part: feature:463540-463649:-1:exon
so has part: feature:463124-463435:-1:exon
so has part: feature:462609-462753:-1:exon
so has part: feature:461171-461374:-1:exon
so has part: feature:460263-460350:-1:exon
so has part: feature:459801-459898:-1:exon
so has part: feature:459059-459206:-1:exon
so has part: feature:458481-458662:-1:exon
so has part: feature:457880-458074:-1:exon
so has part: feature:457454-457639:-1:exon
so has part: feature:456653-456863:-1:exon
so has part: feature:456283-456464:-1:exon
so has part: feature:455444-455584:-1:exon
so has part: feature:454987-455142:-1:exon
so has part: feature:454082-454219:-1:exon
so has part: feature:453442-453570:-1:exon
so has part: feature:451797-451993:-1:exon
so has part: feature:451451-451630:-1:exon
so has part: feature:449582-450866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467500-467646:-1:exon

position:467500:-1
position: 467500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465829-465914:-1:exon

position:465829:-1
position: 465829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465914:-1
position: 465914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465154-465226:-1:exon

position:465154:-1
position: 465154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465226:-1
position: 465226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464654-464739:-1:exon

position:464654:-1
position: 464654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464739:-1
position: 464739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:463540-463649:-1:exon

position:463540:-1
position: 463540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463649:-1
position: 463649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463124-463435:-1:exon

position:463124:-1
position: 463124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463435:-1
position: 463435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462609-462753:-1:exon

position:462609:-1
position: 462609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462753:-1
position: 462753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:461171-461374:-1:exon

position:461171:-1
position: 461171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461374:-1
position: 461374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:460263-460350:-1:exon

position:460263:-1
position: 460263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460350:-1
position: 460350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:459801-459898:-1:exon

position:459801:-1
position: 459801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459898:-1
position: 459898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:459059-459206:-1:exon

position:459059:-1
position: 459059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459206:-1
position: 459206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:458481-458662:-1:exon

position:458481:-1
position: 458481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458662:-1
position: 458662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:457880-458074:-1:exon

position:457880:-1
position: 457880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458074:-1
position: 458074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:457454-457639:-1:exon

position:457454:-1
position: 457454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457639:-1
position: 457639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:456653-456863:-1:exon

position:456653:-1
position: 456653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456863:-1
position: 456863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:456283-456464:-1:exon

position:456283:-1
position: 456283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456464:-1
position: 456464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:455444-455584:-1:exon

position:455444:-1
position: 455444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455584:-1
position: 455584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:454987-455142:-1:exon

position:454987:-1
position: 454987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455142:-1
position: 455142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:454082-454219:-1:exon

position:454082:-1
position: 454082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454219:-1
position: 454219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:453442-453570:-1:exon

position:453442:-1
position: 453442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453570:-1
position: 453570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:451797-451993:-1:exon

position:451797:-1
position: 451797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451993:-1
position: 451993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:451451-451630:-1:exon

position:451451:-1
position: 451451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451630:-1
position: 451630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:449582-450866:-1:exon

position:450866:-1
position: 450866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: DHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DHX8
translation: MAVCESGAGAMGDPAGADELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKAALTKNGAEFTDSLISNLLRLIQTMRPPAKPSTGKEVVVKPKTEKEKLKDLFPALCRPDNPTIRTMLDEDDVKVAVDALKELEALMPSAGGQEKQRNTDHRAKKKRRSRSHDRDRKRRHRSRSRSRSRTRDKNKGKSRYRSRSRSLSPSRDRKDREKYAEKCNDRWRDKHVDRPPPEEPSIGEIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETAMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLSQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
SIO_010081: DHX8
subclass of: SO_0000673
so part of: DHX8
location: complement(join(450647..450866,451451..451630,451797..451993,453442..453570,454082..454219,454987..455142,455444..455584,456283..456464,456653..456863,457454..457639,457880..458074,458481..458662,459059..459206,459801..459898,460263..460350,461171..461374,462609..462753,463124..463435,463540..463649,464654..464739,465154..465226,465829..465914,467500..467641))
location: region:450647-467641:-1
so has part: feature:467500-467641:-1:exon
so has part: feature:465829-465914:-1:exon
so has part: feature:465154-465226:-1:exon
so has part: feature:464654-464739:-1:exon
so has part: feature:463540-463649:-1:exon
so has part: feature:463124-463435:-1:exon
so has part: feature:462609-462753:-1:exon
so has part: feature:461171-461374:-1:exon
so has part: feature:460263-460350:-1:exon
so has part: feature:459801-459898:-1:exon
so has part: feature:459059-459206:-1:exon
so has part: feature:458481-458662:-1:exon
so has part: feature:457880-458074:-1:exon
so has part: feature:457454-457639:-1:exon
so has part: feature:456653-456863:-1:exon
so has part: feature:456283-456464:-1:exon
so has part: feature:455444-455584:-1:exon
so has part: feature:454987-455142:-1:exon
so has part: feature:454082-454219:-1:exon
so has part: feature:453442-453570:-1:exon
so has part: feature:451797-451993:-1:exon
so has part: feature:451451-451630:-1:exon
so has part: feature:450647-450866:-1:exon

XP_044855598.1
type: Protein
SIO_000068: ncbiprotein

position:450647:-1
position: 450647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467641:-1
position: 467641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467500-467641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465829-465914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465154-465226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464654-464739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463540-463649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463124-463435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462609-462753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:461171-461374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460263-460350:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:459801-459898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459059-459206:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458481-458662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:457880-458074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:457454-457639:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456653-456863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456283-456464:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455444-455584:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:454987-455142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:454082-454219:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453442-453570:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:451797-451993:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:451451-451630:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:450647-450866:-1:exon

ARL4D
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: ARL4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(555195..557675)
location: region:555195-557675:-1
so has part: feature:555195-557675:-1:exon
subclass of: SO_0000010

123356410
type: Gene
SIO_000068: ncbigene

position:555195:-1
position: 555195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557675:-1
position: 557675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555195-557675:-1:exon

ARL4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: ARL4D
product: ADP ribosylation factor like GTPase 4D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_044999654.1
SIO_010081: ARL4D
subclass of: SO_0000673
so part of: ARL4D
location: complement(join(555195..557173,557560..557675))
location: region:555195-557675:-1
so has part: feature:557560-557675:-1:exon
so has part: feature:555195-557173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557560-557675:-1:exon

position:557560:-1
position: 557560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555195-557173:-1:exon

position:557173:-1
position: 557173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: ARL4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 4D
translation: MGNQLAEIAPAPPFLPHFQALHVVVIGLDAAGKTSLLYRLKFKEFVRSAPTKGFNMEKIRVPLGGSRAIAFQVWDVGGQEKLRPLWKSYTRRTDGLVFVVDSAEGERMEEARVELHRITRTSENQGVPVLILANKQDLPGALAASEVEKLLALHELSASTLSCTQGCSAVDGLGLQQGLEKLYEMILKRKKMLRHSKKKR
SIO_010081: ARL4D
subclass of: SO_0000673
so part of: ARL4D
location: complement(556529..557131)
location: region:556529-557131:-1
so has part: feature:556529-557131:-1:exon

XP_044855589.1
type: Protein
SIO_000068: ncbiprotein

position:556529:-1
position: 556529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557131:-1
position: 557131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556529-557131:-1:exon

LOC123356562
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 557130..563730
location: region:557130-563730:1
so has part: feature:557130-563730:1:exon
subclass of: SO_0000010

123356562
type: Gene
SIO_000068: ncbigene

position:557130:1
position: 557130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563730:1
position: 563730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557130-563730:1:exon

LOC123356562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356562
product: collagen alpha-1(I) chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999929.1
SIO_010081: LOC123356562
subclass of: SO_0000673
so part of: LOC123356562
location: join(557130..557196,560191..560253,560790..561166,561618..561705,562499..562581,563228..563730)
location: region:557130-563730:1
so has part: feature:557130-557196:1:exon
so has part: feature:560191-560253:1:exon
so has part: feature:560790-561166:1:exon
so has part: feature:561618-561705:1:exon
so has part: feature:562499-562581:1:exon
so has part: feature:563228-563730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557130-557196:1:exon

position:557196:1
position: 557196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560191-560253:1:exon

position:560191:1
position: 560191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560253:1
position: 560253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560790-561166:1:exon

position:560790:1
position: 560790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561166:1
position: 561166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561618-561705:1:exon

position:561618:1
position: 561618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561705:1
position: 561705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562499-562581:1:exon

position:562499:1
position: 562499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562581:1
position: 562581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563228-563730:1:exon

position:563228:1
position: 563228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MVPGPGEAALAGAPGCGGGEGQDSALKEARQGYEGRTYSTLVTAPPGGEPGPRRLRRRSAPWREPGPRRLRRRSAPWREPGPQGPSRGWVRGRGPSRPSTAPDPVAWQPPPHCEAGPRGLPLRLPWAEPAPARPRCPRPGPAAMSACHWEARRRQLVLERRRRNQLLQQKAEEAAKAAPEQRPEISPPQQQPQGPLRPEVTCSCQCCPCQCHYVMISSAKLPRRFSAVQYIQQW
SIO_010081: LOC123356562
subclass of: SO_0000673
so part of: LOC123356562
location: join(557130..557196,560191..560253,560790..561166,561618..561705,562499..562581,563228..563254)
location: region:557130-563254:1
so has part: feature:557130-557196:1:exon
so has part: feature:560191-560253:1:exon
so has part: feature:560790-561166:1:exon
so has part: feature:561618-561705:1:exon
so has part: feature:562499-562581:1:exon
so has part: feature:563228-563254:1:exon

XP_044855864.1
type: Protein
SIO_000068: ncbiprotein

position:563254:1
position: 563254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557130-557196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560191-560253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560790-561166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561618-561705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562499-562581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563228-563254:1:exon

TMEM106A
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(564936..577499)
location: region:564936-577499:-1
so has part: feature:564936-577499:-1:exon
subclass of: SO_0000010

123356395
type: Gene
SIO_000068: ncbigene

position:564936:-1
position: 564936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577499:-1
position: 577499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564936-577499:-1:exon

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999634.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(564936..566907,568672..568725,569648..569691,570152..570292,570890..571049,571546..571609,572418..572646,577374..577499))
location: region:564936-577499:-1
so has part: feature:577374-577499:-1:exon
so has part: feature:572418-572646:-1:exon
so has part: feature:571546-571609:-1:exon
so has part: feature:570890-571049:-1:exon
so has part: feature:570152-570292:-1:exon
so has part: feature:569648-569691:-1:exon
so has part: feature:568672-568725:-1:exon
so has part: feature:564936-566907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577374-577499:-1:exon

position:577374:-1
position: 577374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572418-572646:-1:exon

position:572418:-1
position: 572418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572646:-1
position: 572646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571546-571609:-1:exon

position:571546:-1
position: 571546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571609:-1
position: 571609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570890-571049:-1:exon

position:570890:-1
position: 570890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571049:-1
position: 571049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:570152-570292:-1:exon

position:570152:-1
position: 570152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570292:-1
position: 570292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:569648-569691:-1:exon

position:569648:-1
position: 569648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569691:-1
position: 569691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:568672-568725:-1:exon

position:568672:-1
position: 568672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568725:-1
position: 568725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:564936-566907:-1:exon

position:566907:-1
position: 566907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999633.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(564936..566907,568672..568725,569648..569691,570152..570292,570890..571049,571546..571609,572418..572658,577070..577093))
location: region:564936-577093:-1
so has part: feature:577070-577093:-1:exon
so has part: feature:572418-572658:-1:exon
so has part: feature:571546-571609:-1:exon
so has part: feature:570890-571049:-1:exon
so has part: feature:570152-570292:-1:exon
so has part: feature:569648-569691:-1:exon
so has part: feature:568672-568725:-1:exon
so has part: feature:564936-566907:-1:exon

position:577093:-1
position: 577093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577070-577093:-1:exon

position:577070:-1
position: 577070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572418-572658:-1:exon

position:572658:-1
position: 572658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571546-571609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570890-571049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570152-570292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569648-569691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:568672-568725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564936-566907:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X2
translation: MEEPCPHILPNTCNLLPLYRHLLPPIHWCPVPHAQSQLSTMGETFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGYINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIAVQPAGLNASSIAFNSTVPSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKKNLLNIGPLCSSQIYYSVSTIILDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(566787..566907,568672..568725,569648..569691,570152..570292,570890..571049,571546..571609,572418..572646,577374..577484))
location: region:566787-577484:-1
so has part: feature:577374-577484:-1:exon
so has part: feature:572418-572646:-1:exon
so has part: feature:571546-571609:-1:exon
so has part: feature:570890-571049:-1:exon
so has part: feature:570152-570292:-1:exon
so has part: feature:569648-569691:-1:exon
so has part: feature:568672-568725:-1:exon
so has part: feature:566787-566907:-1:exon

XP_044855569.1
type: Protein
SIO_000068: ncbiprotein

position:566787:-1
position: 566787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577484:-1
position: 577484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577374-577484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572418-572646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571546-571609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570890-571049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570152-570292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569648-569691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:568672-568725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566787-566907:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X1
translation: MAQWKNSLSTMGETFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGYINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIAVQPAGLNASSIAFNSTVPSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKKNLLNIGPLCSSQIYYSVSTIILDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(566787..566907,568672..568725,569648..569691,570152..570292,570890..571049,571546..571609,572418..572658,577070..577078))
location: region:566787-577078:-1
so has part: feature:577070-577078:-1:exon
so has part: feature:572418-572658:-1:exon
so has part: feature:571546-571609:-1:exon
so has part: feature:570890-571049:-1:exon
so has part: feature:570152-570292:-1:exon
so has part: feature:569648-569691:-1:exon
so has part: feature:568672-568725:-1:exon
so has part: feature:566787-566907:-1:exon

XP_044855568.1
type: Protein
SIO_000068: ncbiprotein

position:577078:-1
position: 577078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577070-577078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572418-572658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571546-571609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570890-571049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570152-570292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569648-569691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:568672-568725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566787-566907:-1:exon

NBR1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(580646..609155)
location: region:580646-609155:-1
so has part: feature:580646-609155:-1:exon
subclass of: SO_0000010

123356363
type: Gene
SIO_000068: ncbigene

position:580646:-1
position: 580646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609155:-1
position: 609155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580646-609155:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999572.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,609052..609155))
location: region:580646-609155:-1
so has part: feature:609052-609155:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609052-609155:-1:exon

position:609052:-1
position: 609052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

position:606242:-1
position: 606242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606352:-1
position: 606352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

position:603365:-1
position: 603365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603427:-1
position: 603427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

position:602004:-1
position: 602004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602022:-1
position: 602022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

position:601090:-1
position: 601090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601112:-1
position: 601112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

position:600077:-1
position: 600077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600295:-1
position: 600295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

position:599243:-1
position: 599243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599344:-1
position: 599344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

position:597821:-1
position: 597821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598038:-1
position: 598038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

position:596651:-1
position: 596651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596815:-1
position: 596815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

position:595841:-1
position: 595841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596047:-1
position: 596047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

position:594434:-1
position: 594434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594593:-1
position: 594593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

position:593602:-1
position: 593602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593889:-1
position: 593889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

position:592797:-1
position: 592797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592949:-1
position: 592949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

position:592182:-1
position: 592182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592257:-1
position: 592257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

position:591505:-1
position: 591505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591615:-1
position: 591615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

position:590636:-1
position: 590636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590797:-1
position: 590797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

position:590374:-1
position: 590374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590508:-1
position: 590508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

position:587382:-1
position: 587382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587745:-1
position: 587745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

position:587009:-1
position: 587009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587103:-1
position: 587103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

position:586180:-1
position: 586180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586261:-1
position: 586261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

position:585208:-1
position: 585208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585313:-1
position: 585313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

position:583209:-1
position: 583209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999567.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608739,609052..609139))
location: region:580646-609139:-1
so has part: feature:609052-609139:-1:exon
so has part: feature:608511-608739:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
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position:609139:-1
position: 609139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609052-609139:-1:exon

urn:…
SIO_000300: 2
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position:608511:-1
position: 608511
reference: sequence
type: ReverseStrandPosition
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position:608739:-1
position: 608739
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999570.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608690..608739,609052..609094))
location: region:580646-609094:-1
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so has part: feature:580646-583209:-1:exon

position:609094:-1
position: 609094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609052-609094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608690-608739:-1:exon

position:608690:-1
position: 608690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999575.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..609027))
location: region:580646-609027:-1
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so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583209:-1:exon

position:609027:-1
position: 609027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999566.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..609027))
location: region:580646-609027:-1
so has part: feature:608511-609027:-1:exon
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so has part: feature:586180-586261:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:608511-609027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
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urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999571.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606332..606352,608511..609026))
location: region:580646-609026:-1
so has part: feature:608511-609026:-1:exon
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so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583209:-1:exon

position:609026:-1
position: 609026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606332-606352:-1:exon

position:606332:-1
position: 606332
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
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SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999569.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599317,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..609026))
location: region:580646-609026:-1
so has part: feature:608511-609026:-1:exon
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so has part: feature:586180-586261:-1:exon
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so has part: feature:580646-583209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599317:-1:exon

position:599317:-1
position: 599317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999568.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583206,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..609026))
location: region:580646-609026:-1
so has part: feature:608511-609026:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583206:-1:exon

position:583206:-1
position: 583206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999576.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606307..606352,608511..609025))
location: region:580646-609025:-1
so has part: feature:608511-609025:-1:exon
so has part: feature:606307-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583209:-1:exon

position:609025:-1
position: 609025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606307-606352:-1:exon

position:606307:-1
position: 606307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999573.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(580646..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,606522..606539))
location: region:580646-606539:-1
so has part: feature:606522-606539:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:580646-583209:-1:exon

position:606539:-1
position: 606539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606522-606539:-1:exon

position:606522:-1
position: 606522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:580646-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X4
translation: MLGARPSLGDTWLHPSSLRPIQRREAPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608690..608739,609052..609079))
location: region:583033-609079:-1
so has part: feature:609052-609079:-1:exon
so has part: feature:608690-608739:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855505.1
type: Protein
SIO_000068: ncbiprotein

position:583033:-1
position: 583033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609079:-1
position: 609079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609052-609079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608690-608739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X5
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606332..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606332-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855506.1
type: Protein
SIO_000068: ncbiprotein

position:608651:-1
position: 608651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606332-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X3
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599317,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599317:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X8
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X2
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583206,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583206:-1:exon

XP_044855503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:583033-583206:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X1
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X1
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:583033-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X6
translation: MEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606343))
location: region:583033-606343:-1
so has part: feature:606242-606343:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855507.1
type: Protein
SIO_000068: ncbiprotein

position:606343:-1
position: 606343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606242-606343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X6
translation: MEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606343))
location: region:583033-606343:-1
so has part: feature:606242-606343:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606242-606343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X9
translation: MDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTRHPQGSSIAGGLVKGALSVAASAYKALFAGQSIAEQQSTNTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYTSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(583033..583209,585208..585313,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603385))
location: region:583033-603385:-1
so has part: feature:603365-603385:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585208-585313:-1:exon
so has part: feature:583033-583209:-1:exon

XP_044855511.1
type: Protein
SIO_000068: ncbiprotein

position:603385:-1
position: 603385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603365-603385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:585208-585313:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:583033-583209:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: NBR1
product: NBR1 autophagy cargo receptor, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999574.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(585234..585335,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..609027))
location: region:585234-609027:-1
so has part: feature:608511-609027:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585234-585335:-1:exon

position:585234:-1
position: 585234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-609027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585234-585335:-1:exon

position:585335:-1
position: 585335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein isoform X7
translation: MVRGRRGESAMLGASVTTVRSERRREPPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAATQGNQLQMKVYQVNSLPSETSHSCSTQVCEKAGLENLSIPKDGKRPLSHYSMLAQALGQDLKAERETTAQVCSLFLALQQKLNQNEAEGTNEKPPEWFTSYLELFREQVVKETVEKLEQKLSEKLILHNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHAQIVGIRYQCSVCPAYSICEPCEAGTYAHDPNHVLLKLRRPVLCVSETYSVGQFSPRLPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITSSPAIKPESLQPSALMSPIQPCPTVVPTLSAAFVDENLPDGTRIQPGTQFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVTACLERNQKTSSSILKDKDSCRNEVVSSKSEAEGQEAGERMEQTDLPVPGIPLKIKNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGSGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSVKSEEAVRTKSNSASKPKEMGSKSQQTEENRFEKLAVSDGANLSGEPSDAEYEEEEDVKDEVQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAMDTDMEMVIPEGESQPRVHNINDILTTSQTLDAVLLTPEIVSTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIRQEPRYEDFPGPGPSRIVNNNKSKCPEYTR
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(585332..585335,586180..586261,587009..587103,587382..587745,590374..590508,590636..590797,591505..591615,592182..592257,592797..592949,593602..593889,594434..594593,595841..596047,596651..596815,597821..598038,599243..599344,600077..600295,601090..601112,602004..602022,603365..603427,606242..606352,608511..608651))
location: region:585332-608651:-1
so has part: feature:608511-608651:-1:exon
so has part: feature:606242-606352:-1:exon
so has part: feature:603365-603427:-1:exon
so has part: feature:602004-602022:-1:exon
so has part: feature:601090-601112:-1:exon
so has part: feature:600077-600295:-1:exon
so has part: feature:599243-599344:-1:exon
so has part: feature:597821-598038:-1:exon
so has part: feature:596651-596815:-1:exon
so has part: feature:595841-596047:-1:exon
so has part: feature:594434-594593:-1:exon
so has part: feature:593602-593889:-1:exon
so has part: feature:592797-592949:-1:exon
so has part: feature:592182-592257:-1:exon
so has part: feature:591505-591615:-1:exon
so has part: feature:590636-590797:-1:exon
so has part: feature:590374-590508:-1:exon
so has part: feature:587382-587745:-1:exon
so has part: feature:587009-587103:-1:exon
so has part: feature:586180-586261:-1:exon
so has part: feature:585332-585335:-1:exon

XP_044855509.1
type: Protein
SIO_000068: ncbiprotein

position:585332:-1
position: 585332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608511-608651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606242-606352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603365-603427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602004-602022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601090-601112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600077-600295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599243-599344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597821-598038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596651-596815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595841-596047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594434-594593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593602-593889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592797-592949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592182-592257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591505-591615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:590636-590797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590374-590508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587382-587745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587009-587103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586180-586261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585332-585335:-1:exon

BRCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609342..655818
location: region:609342-655818:1
so has part: feature:609342-655818:1:exon
subclass of: SO_0000010

123356513
type: Gene
SIO_000068: ncbigene

position:609342:1
position: 609342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655818:1
position: 655818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609342-655818:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999828.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(609342..609385,613202..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636665..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..655818)
location: region:609342-655818:1
so has part: feature:609342-609385:1:exon
so has part: feature:613202-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636665-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-655818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609342-609385:1:exon

position:609385:1
position: 609385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613202-613301:1:exon

position:613202:1
position: 613202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613301:1
position: 613301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618852-618905:1:exon

position:618852:1
position: 618852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618905:1
position: 618905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619260-619340:1:exon

position:619260:1
position: 619260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619340:1
position: 619340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619881-619969:1:exon

position:619881:1
position: 619881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619969:1
position: 619969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:621144-621283:1:exon

position:621144:1
position: 621144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621283:1
position: 621283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:622341-622446:1:exon

position:622341:1
position: 622341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622446:1
position: 622446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:623423-623468:1:exon

position:623423:1
position: 623423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623468:1
position: 623468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:626699-626847:1:exon

position:626699:1
position: 626699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626847:1
position: 626847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:628196-631657:1:exon

position:628196:1
position: 628196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631657:1
position: 631657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:632555-632640:1:exon

position:632555:1
position: 632555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632640:1
position: 632640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634912-635086:1:exon

position:634912:1
position: 634912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635086:1
position: 635086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:636665-636797:1:exon

position:636665:1
position: 636665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636797:1
position: 636797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:639844-640043:1:exon

position:639844:1
position: 639844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640043:1
position: 640043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:640578-640894:1:exon

position:640578:1
position: 640578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640894:1
position: 640894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:642605-642692:1:exon

position:642605:1
position: 642605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642692:1
position: 642692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:644252-644329:1:exon

position:644252:1
position: 644252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644329:1
position: 644329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:644624-644664:1:exon

position:644624:1
position: 644624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644664:1
position: 644664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:646377-646460:1:exon

position:646377:1
position: 646377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646460:1
position: 646460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:649650-649704:1:exon

position:649650:1
position: 649650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649704:1
position: 649704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:652511-652584:1:exon

position:652511:1
position: 652511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652584:1
position: 652584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:653416-653476:1:exon

position:653416:1
position: 653416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653476:1
position: 653476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:654593-655818:1:exon

position:654593:1
position: 654593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999829.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(610901..611047,613202..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636671..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..655818)
location: region:610901-655818:1
so has part: feature:610901-611047:1:exon
so has part: feature:613202-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636671-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-655818:1:exon

position:610901:1
position: 610901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610901-611047:1:exon

position:611047:1
position: 611047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613202-613301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618852-618905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619260-619340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619881-619969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621144-621283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622341-622446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623423-623468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:626699-626847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628196-631657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632555-632640:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634912-635086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:636671-636797:1:exon

position:636671:1
position: 636671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:639844-640043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:640578-640894:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:642605-642692:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644252-644329:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:644624-644664:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:646377-646460:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:649650-649704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:652511-652584:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:653416-653476:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:654593-655818:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999827.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(610902..611047,613202..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636665..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..655818)
location: region:610902-655818:1
so has part: feature:610902-611047:1:exon
so has part: feature:613202-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636665-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-655818:1:exon

position:610902:1
position: 610902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610902-611047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613202-613301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618852-618905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619260-619340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619881-619969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621144-621283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622341-622446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623423-623468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:626699-626847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628196-631657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632555-632640:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634912-635086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:636665-636797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:639844-640043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:640578-640894:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:642605-642692:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644252-644329:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:644624-644664:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:646377-646460:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:649650-649704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:652511-652584:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:653416-653476:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:654593-655818:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X1
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWKEDSIIQSKGYRNRQKRIQEQENPTLEANAGAQAADNMVRRSSLRNKRQKCASGKAVYIEFGSDSSDDLFKKAGGGGMGDKELFQTPPQKGECEEELKYAQKESESPYNIWPIKSDAGEILSSDILGECGVSEEDSKGTWNGIEDLEAAQVNVAEGHLKESQGISASNSQAEQCDRTANASSLLNEDTSLFHSAEEMHAGETPFSSKNKESGLAHSSENQLDKSKKTGNGVQHTEAVETCQPESNSLHEREPALESLLQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGAADTEDGDSYLSDRESCISEKTDLMVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKRERKSNSLVHTREMPRSPKMEDVTTDVKPSSNSATSKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNTGRKNGGEGSTVVNGSPMGVKNGDNIPAELPLQEGKFILKNDTEKVTCNSTDREPAQNTCDRKSTKKMRSSQTKRSRHSGRPVCSLQLIVHRNSSCPDQTEMQIDSYPSSEEPRKVDSEKKRVRCSRRLQLLTEKITKETRRRGEPNERARKHASESKDSSSGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHPNHEDCSDGMQTGKGLFYAKISVEDLNACSVVPDTDSQVCENQGSQSLPQPHSTNVDQAAWPVQNLSENNQCATIEPQKKESCAGSPKTNRHCTENDLERFRNPKSPEAKIISELNTETEDSELDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSSASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSGKGISGHRPGTHFSRDTEYGHVSDDGETISQLPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEMVVESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEKAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGEYKQVKSDKEQVSQIASVGVPECLISEEALEQPTEDTSGFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKGQDTSLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDEELPCFQALIFGKSASTPLQPTEQIMSTVESSSLAEILALLNSSSGNNKAVQKTPGVILRDTCVSPSQESECSVNLFSSQSNISEDSTNRPQELKKPITLAPCSKEMSSLNVSREASPNGNEELTGRKTDLEGGHQRDQNVPPNLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFPPPASELPHSRVEGTLTVGQMRPARGTALISEVNLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLLKKEALEQGHWCPSLWKAKTHSQEGTFQRVDVAVLLEQEAVKQCNQYRIEPENAAEQEFGTKINSAAVPCGNERRTPNSSPLKFSERLTHCQTAESTNSVAVSWNVVNGKSTQGCKQEFSSASALHTGVVKENAKSPVVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHQGPKRARRSQAGKLFKDFEICCYGPFTDMRTGDLEWMAELCGASVVKQPHLFTHKANSTAVIVVQPDAWLENSGYRAIQQKCTAVVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(613222..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636665..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..654699)
location: region:613222-654699:1
so has part: feature:613222-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636665-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-654699:1:exon

XP_044855762.1
type: Protein
SIO_000068: ncbiprotein

position:613222:1
position: 613222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654699:1
position: 654699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613222-613301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618852-618905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619260-619340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619881-619969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621144-621283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622341-622446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623423-623468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626699-626847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:628196-631657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632555-632640:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634912-635086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:636665-636797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:639844-640043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640578-640894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:642605-642692:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:644252-644329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644624-644664:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:646377-646460:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:649650-649704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:652511-652584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:653416-653476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:654593-654699:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X1
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWKEDSIIQSKGYRNRQKRIQEQENPTLEANAGAQAADNMVRRSSLRNKRQKCASGKAVYIEFGSDSSDDLFKKAGGGGMGDKELFQTPPQKGECEEELKYAQKESESPYNIWPIKSDAGEILSSDILGECGVSEEDSKGTWNGIEDLEAAQVNVAEGHLKESQGISASNSQAEQCDRTANASSLLNEDTSLFHSAEEMHAGETPFSSKNKESGLAHSSENQLDKSKKTGNGVQHTEAVETCQPESNSLHEREPALESLLQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGAADTEDGDSYLSDRESCISEKTDLMVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKRERKSNSLVHTREMPRSPKMEDVTTDVKPSSNSATSKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNTGRKNGGEGSTVVNGSPMGVKNGDNIPAELPLQEGKFILKNDTEKVTCNSTDREPAQNTCDRKSTKKMRSSQTKRSRHSGRPVCSLQLIVHRNSSCPDQTEMQIDSYPSSEEPRKVDSEKKRVRCSRRLQLLTEKITKETRRRGEPNERARKHASESKDSSSGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHPNHEDCSDGMQTGKGLFYAKISVEDLNACSVVPDTDSQVCENQGSQSLPQPHSTNVDQAAWPVQNLSENNQCATIEPQKKESCAGSPKTNRHCTENDLERFRNPKSPEAKIISELNTETEDSELDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSSASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSGKGISGHRPGTHFSRDTEYGHVSDDGETISQLPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEMVVESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEKAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGEYKQVKSDKEQVSQIASVGVPECLISEEALEQPTEDTSGFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKGQDTSLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDEELPCFQALIFGKSASTPLQPTEQIMSTVESSSLAEILALLNSSSGNNKAVQKTPGVILRDTCVSPSQESECSVNLFSSQSNISEDSTNRPQELKKPITLAPCSKEMSSLNVSREASPNGNEELTGRKTDLEGGHQRDQNVPPNLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFPPPASELPHSRVEGTLTVGQMRPARGTALISEVNLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLLKKEALEQGHWCPSLWKAKTHSQEGTFQRVDVAVLLEQEAVKQCNQYRIEPENAAEQEFGTKINSAAVPCGNERRTPNSSPLKFSERLTHCQTAESTNSVAVSWNVVNGKSTQGCKQEFSSASALHTGVVKENAKSPVVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHQGPKRARRSQAGKLFKDFEICCYGPFTDMRTGDLEWMAELCGASVVKQPHLFTHKANSTAVIVVQPDAWLENSGYRAIQQKCTAVVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(613222..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636665..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..654699)
location: region:613222-654699:1
so has part: feature:613222-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636665-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-654699:1:exon

XP_044855763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613222-613301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618852-618905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619260-619340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619881-619969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621144-621283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622341-622446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623423-623468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626699-626847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:628196-631657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632555-632640:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634912-635086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:636665-636797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:639844-640043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640578-640894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:642605-642692:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:644252-644329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644624-644664:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:646377-646460:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:649650-649704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:652511-652584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:653416-653476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:654593-654699:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X2
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWKEDSIIQSKGYRNRQKRIQEQENPTLEANAGAQAADNMVRRSSLRNKRQKCASGKAVYIEFGSDSSDDLFKKAGGGGMGDKELFQTPPQKGECEEELKYAQKESESPYNIWPIKSDAGEILSSDILGECGVSEEDSKGTWNGIEDLEAAQVNVAEGHLKESQGISASNSQAEQCDRTANASSLLNEDTSLFHSAEEMHAGETPFSSKNKESGLAHSSENQLDKSKKTGNGVQHTEAVETCQPESNSLHEREPALESLLQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGAADTEDGDSYLSDRESCISEKTDLMVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKRERKSNSLVHTREMPRSPKMEDVTTDVKPSSNSATSKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNTGRKNGGEGSTVVNGSPMGVKNGDNIPAELPLQEGKFILKNDTEKVTCNSTDREPAQNTCDRKSTKKMRSSQTKRSRHSGRPVCSLQLIVHRNSSCPDQTEMQIDSYPSSEEPRKVDSEKKRVRCSRRLQLLTEKITKETRRRGEPNERARKHASESKDSSSGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHPNHEDCSDGMQTGKGLFYAKISVEDLNACSVVPDTDSQVCENQGSQSLPQPHSTNVDQAAWPVQNLSENNQCATIEPQKKESCAGSPKTNRHCTENDLERFRNPKSPEAKIISELNTETEDSELDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSSASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSGKGISGHRPGTHFSRDTEYGHVSDDGETISQLPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEMVVESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEKAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGEYKQVKSDKEQVSQIASVGVPECLISEEALEQPTEDTSGFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKGQDTSLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDEELPCFQALIFGKSASTPLQPTEQIMSTVESSSLAEILALLNSSSGNNKAVQKTPGVILRDTCVSPSQESECSVNLFSSQSNISEDSTNRPQELKKPITLAPCSKEMSSLNVSREASPNGNEELTGRKTDLEGGHQRDQNVPPNLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFPPPASELPHSRVEGTLTVGQMRPARALISEVNLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLLKKEALEQGHWCPSLWKAKTHSQEGTFQRVDVAVLLEQEAVKQCNQYRIEPENAAEQEFGTKINSAAVPCGNERRTPNSSPLKFSERLTHCQTAESTNSVAVSWNVVNGKSTQGCKQEFSSASALHTGVVKENAKSPVVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHQGPKRARRSQAGKLFKDFEICCYGPFTDMRTGDLEWMAELCGASVVKQPHLFTHKANSTAVIVVQPDAWLENSGYRAIQQKCTAVVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(613222..613301,618852..618905,619260..619340,619881..619969,621144..621283,622341..622446,623423..623468,626699..626847,628196..631657,632555..632640,634912..635086,636671..636797,639844..640043,640578..640894,642605..642692,644252..644329,644624..644664,646377..646460,649650..649704,652511..652584,653416..653476,654593..654699)
location: region:613222-654699:1
so has part: feature:613222-613301:1:exon
so has part: feature:618852-618905:1:exon
so has part: feature:619260-619340:1:exon
so has part: feature:619881-619969:1:exon
so has part: feature:621144-621283:1:exon
so has part: feature:622341-622446:1:exon
so has part: feature:623423-623468:1:exon
so has part: feature:626699-626847:1:exon
so has part: feature:628196-631657:1:exon
so has part: feature:632555-632640:1:exon
so has part: feature:634912-635086:1:exon
so has part: feature:636671-636797:1:exon
so has part: feature:639844-640043:1:exon
so has part: feature:640578-640894:1:exon
so has part: feature:642605-642692:1:exon
so has part: feature:644252-644329:1:exon
so has part: feature:644624-644664:1:exon
so has part: feature:646377-646460:1:exon
so has part: feature:649650-649704:1:exon
so has part: feature:652511-652584:1:exon
so has part: feature:653416-653476:1:exon
so has part: feature:654593-654699:1:exon

XP_044855764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613222-613301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618852-618905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619260-619340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619881-619969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621144-621283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622341-622446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623423-623468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626699-626847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:628196-631657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632555-632640:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634912-635086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:636671-636797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:639844-640043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640578-640894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:642605-642692:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:644252-644329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644624-644664:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:646377-646460:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:649650-649704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:652511-652584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:653416-653476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:654593-654699:1:exon

LOC123356454
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668473..673319)
location: region:668473-673319:-1
so has part: feature:668473-673319:-1:exon
subclass of: SO_0000011

123356454
type: Gene
SIO_000068: ncbigene

position:668473:-1
position: 668473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673319:-1
position: 673319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668473-673319:-1:exon

LOC123356454
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74926
nc RNA class: lncRNA
gene: LOC123356454
product: uncharacterized LOC123356454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_006575358.1
SIO_010081: LOC123356454
subclass of: SO_0000673
so part of: LOC123356454
location: complement(join(668473..668551,671221..671263,673126..673319))
location: region:668473-673319:-1
so has part: feature:673126-673319:-1:exon
so has part: feature:671221-671263:-1:exon
so has part: feature:668473-668551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673126-673319:-1:exon

position:673126:-1
position: 673126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671221-671263:-1:exon

position:671221:-1
position: 671221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671263:-1
position: 671263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668473-668551:-1:exon

position:668551:-1
position: 668551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RND2
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: RND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(743974..773917)
location: region:743974-773917:-1
so has part: feature:743974-773917:-1:exon
subclass of: SO_0000010

123356365
type: Gene
SIO_000068: ncbigene

position:743974:-1
position: 743974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773917:-1
position: 773917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743974-773917:-1:exon

RND2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: RND2
product: Rho family GTPase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_044999577.1
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(743974..745510,748503..748637,754342..754451,772617..772704,773749..773917))
location: region:743974-773917:-1
so has part: feature:773749-773917:-1:exon
so has part: feature:772617-772704:-1:exon
so has part: feature:754342-754451:-1:exon
so has part: feature:748503-748637:-1:exon
so has part: feature:743974-745510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773749-773917:-1:exon

position:773749:-1
position: 773749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772617-772704:-1:exon

position:772617:-1
position: 772617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772704:-1
position: 772704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754342-754451:-1:exon

position:754342:-1
position: 754342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754451:-1
position: 754451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748503-748637:-1:exon

position:748503:-1
position: 748503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748637:-1
position: 748637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:743974-745510:-1:exon

position:745510:-1
position: 745510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: RND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoN
translation: MESGARCKIVVVGDTQCGKTALLHVFAKDSYPENYVATVFENYTASFEIDKQRIELNMWDTSGSAYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKIVLVGCKLDMRTDLNTLRELSKQRLIPVTHEQGSTLARQMGAVAYVECSSKVSENSVRDVFHVTTLASVNRMHKNLKRSNSKRGLKRASQMPSRTDLLNDTEIRKDRAKSCSIM
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(745262..745510,748503..748637,754342..754451,772617..772704,773749..773847))
location: region:745262-773847:-1
so has part: feature:773749-773847:-1:exon
so has part: feature:772617-772704:-1:exon
so has part: feature:754342-754451:-1:exon
so has part: feature:748503-748637:-1:exon
so has part: feature:745262-745510:-1:exon

XP_044855512.1
type: Protein
SIO_000068: ncbiprotein

position:745262:-1
position: 745262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773847:-1
position: 773847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773749-773847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772617-772704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754342-754451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748503-748637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745262-745510:-1:exon

VAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: VAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 809698..835100
location: region:809698-835100:1
so has part: feature:809698-835100:1:exon
subclass of: SO_0000010

123356310
type: Gene
SIO_000068: ncbigene

position:809698:1
position: 809698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835100:1
position: 835100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809698-835100:1:exon

VAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: VAT1
product: vesicle amine transport 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_044999444.1
SIO_010081: VAT1
subclass of: SO_0000673
so part of: VAT1
location: join(809698..810165,823148..823355,823842..824012,824132..824221,825310..825551,831508..835100)
location: region:809698-835100:1
so has part: feature:809698-810165:1:exon
so has part: feature:823148-823355:1:exon
so has part: feature:823842-824012:1:exon
so has part: feature:824132-824221:1:exon
so has part: feature:825310-825551:1:exon
so has part: feature:831508-835100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809698-810165:1:exon

position:810165:1
position: 810165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823148-823355:1:exon

position:823148:1
position: 823148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823355:1
position: 823355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823842-824012:1:exon

position:823842:1
position: 823842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824012:1
position: 824012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:824132-824221:1:exon

position:824132:1
position: 824132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824221:1
position: 824221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:825310-825551:1:exon

position:825310:1
position: 825310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825551:1
position: 825551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831508-835100:1:exon

position:831508:1
position: 831508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: VAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle membrane protein VAT-1 homolog
translation: MSGEEAAAPPAPADQAPPAEQQAAGGGDAPPAEPQYRALVLSGFGGYEKVKVQVRRGEPSPRPGELAVRVRACGLNFADLLARQGLYERLPPPPVSPGMECAGTVLALGEGVTGRQVGDKVMVLARAGLWQEVVTVPANQTYPMPDGMSFEEAAAFLVNYITAYMILFDFGNLRPNQSVLIHMAAGGVGTAAIQLCKTVENVTIFGTASASKHDALRESGVAHPIDYRSMDYVEEVRKISPKGVDVVLDPLGGSDTTKAFNLLKPMGKLITYGVANLLTGQKKNLMAMAKTWWNQFSINALQLLHLNKAVCGYHLGYMDEEFELIGGVVAKLVSLYNQGKIKPKIDSVWPFEQVADAMRQMQEKKNVGKVILVPELPKEEPKKEEN
SIO_010081: VAT1
subclass of: SO_0000673
so part of: VAT1
location: join(809818..810165,823148..823355,823842..824012,824132..824221,825310..825551,831508..831609)
location: region:809818-831609:1
so has part: feature:809818-810165:1:exon
so has part: feature:823148-823355:1:exon
so has part: feature:823842-824012:1:exon
so has part: feature:824132-824221:1:exon
so has part: feature:825310-825551:1:exon
so has part: feature:831508-831609:1:exon

XP_044855379.1
type: Protein
SIO_000068: ncbiprotein

position:809818:1
position: 809818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831609:1
position: 831609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809818-810165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823148-823355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823842-824012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:824132-824221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825310-825551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831508-831609:1:exon

LOC123356563
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(836373..846253)
location: region:836373-846253:-1
so has part: feature:836373-846253:-1:exon
subclass of: SO_0000010

123356563
type: Gene
SIO_000068: ncbigene

position:836373:-1
position: 836373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846253:-1
position: 846253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836373-846253:-1:exon

LOC123356563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356563
product: uncharacterized LOC123356563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044999930.1
SIO_010081: LOC123356563
subclass of: SO_0000673
so part of: LOC123356563
location: complement(join(836373..838528,839204..839412,841596..844387,844440..844455,845677..845780,846076..846253))
location: region:836373-846253:-1
so has part: feature:846076-846253:-1:exon
so has part: feature:845677-845780:-1:exon
so has part: feature:844440-844455:-1:exon
so has part: feature:841596-844387:-1:exon
so has part: feature:839204-839412:-1:exon
so has part: feature:836373-838528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846076-846253:-1:exon

position:846076:-1
position: 846076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845677-845780:-1:exon

position:845677:-1
position: 845677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845780:-1
position: 845780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844440-844455:-1:exon

position:844440:-1
position: 844440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844455:-1
position: 844455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:841596-844387:-1:exon

position:841596:-1
position: 841596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844387:-1
position: 844387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:839204-839412:-1:exon

position:839204:-1
position: 839204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839412:-1
position: 839412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:836373-838528:-1:exon

position:838528:-1
position: 838528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC123356563
translation: MAGRTVRVGGIPTDLPPERVADKLTIHFLRARNGGGEIADIALLAGPPACALVTFEEAGVAQRVLEVENHVLLVGGKTYPLTVTAHAAELSPDEIFVRVSCAKRYGAVQFSFDPKETLCTVKGPFTELQAFSKELLRSQQAGEAPPEGVSHPATGTGVSASQQRPSSPLPEPRVEKQPSPGHVHEEASEPRLHRDPVDGEAVEQLEDFSLVMDADIYLYMQKFCSDKYQRVLHQHQVDMVDVSSDGIAILYLQASSKNTGDISSVVQARLALLHLYQQLEASLRKEKISKGELSSDMRSQRALLGDLQKLCPLLLCHEDERHLYLIGNLVDVSQAKQYIQDRSPGRTATAGLRTSNGSLATYTAALHGGDARLGKPEPTVDPSPPRLSSGKFEFKGEHKLAANFSFLKHDAALSSARPSLDRSSLFMEQMQLSGSWLKEAGAPGQNDPAPPSGQHHLPVSATITGPAAEVQQRELKDWDRRKGAPLLLRPKTPSLFAGGKASSTLQSLGVWKSPGPVKPQLISSASSAFKSLSLFDTTGTCSALDSKPPESSAPLRRSNSFSIPKSKASDTPRDPSRVSEEISMDPVQWAYLKEIHGSAIDGLCREGGVLLAERSSKGCTVLTLTAEDRTKLLQARWKMEALCQTVCPALVCQSLSYSELDVEGPSDEALNELCSLLKGCSAQVRVSKDRYKLHLMCPKETLLSVNEAFQRFSARRRSALTLSSPSPGLEGSPAEEYPSPTQQVKTQDPALAAEYHHGREGLQQLEVSSTASRSDVSESASQLDGPGWNGTRTSSYQQALGQEDPSYPSDSQDASGSGLLDASLAGRQSLSPGDPQELQKGERPAGEPEMARIKRVLPDRFQFARDKSRGGPSEAGGSPRPPAHAADGPPQSLPIWLFSSGTVLPARAAERAPKPGQGDPAGDGDSQETAISELELRGPSPGQGAHEHKLGRCDACQSSCTATCRAQCGHALCRTCFAAEDTHPACCGSPKSARAIKGTFKVVTLSQSLPGYFRDPTLKIVYDIPDGVQEAGDPRPGRPYRGGRFQAFLPDNREGKKTSQLLQKAFEQGLTFQIQSCDGEERVMWHLIPHKTSFDKGKARNGYPDSQYLREVSALLRNLGIE
SIO_010081: LOC123356563
subclass of: SO_0000673
so part of: LOC123356563
location: complement(join(838459..838528,839204..839412,841596..844387,844440..844455,845677..845780,846076..846253))
location: region:838459-846253:-1
so has part: feature:846076-846253:-1:exon
so has part: feature:845677-845780:-1:exon
so has part: feature:844440-844455:-1:exon
so has part: feature:841596-844387:-1:exon
so has part: feature:839204-839412:-1:exon
so has part: feature:838459-838528:-1:exon

XP_044855865.1
type: Protein
SIO_000068: ncbiprotein

position:838459:-1
position: 838459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846076-846253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845677-845780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844440-844455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:841596-844387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839204-839412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:838459-838528:-1:exon

IFI35
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(853573..863556)
location: region:853573-863556:-1
so has part: feature:853573-863556:-1:exon
subclass of: SO_0000010

123356205
type: Gene
SIO_000068: ncbigene

position:853573:-1
position: 853573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863556:-1
position: 863556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853573-863556:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: IFI35
product: interferon induced protein 35, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999194.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(853573..853886,855979..856085,856404..856593,859455..859576,859910..860054,860612..860725,861586..861744,862036..862131,862714..862745,863486..863556))
location: region:853573-863556:-1
so has part: feature:863486-863556:-1:exon
so has part: feature:862714-862745:-1:exon
so has part: feature:862036-862131:-1:exon
so has part: feature:861586-861744:-1:exon
so has part: feature:860612-860725:-1:exon
so has part: feature:859910-860054:-1:exon
so has part: feature:859455-859576:-1:exon
so has part: feature:856404-856593:-1:exon
so has part: feature:855979-856085:-1:exon
so has part: feature:853573-853886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863486-863556:-1:exon

position:863486:-1
position: 863486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862714-862745:-1:exon

position:862714:-1
position: 862714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862745:-1
position: 862745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862036-862131:-1:exon

position:862036:-1
position: 862036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862131:-1
position: 862131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:861586-861744:-1:exon

position:861586:-1
position: 861586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861744:-1
position: 861744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860612-860725:-1:exon

position:860612:-1
position: 860612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860725:-1
position: 860725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:859910-860054:-1:exon

position:859910:-1
position: 859910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860054:-1
position: 860054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:859455-859576:-1:exon

position:859455:-1
position: 859455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859576:-1
position: 859576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856404-856593:-1:exon

position:856404:-1
position: 856404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856593:-1
position: 856593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855979-856085:-1:exon

position:855979:-1
position: 855979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856085:-1
position: 856085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:853573-853886:-1:exon

position:853886:-1
position: 853886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: IFI35
product: interferon induced protein 35, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999193.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(853573..853886,855979..856085,856404..856593,859455..859576,859910..860054,860612..860725,861586..861744,862036..862131,862699..862745,863486..863556))
location: region:853573-863556:-1
so has part: feature:863486-863556:-1:exon
so has part: feature:862699-862745:-1:exon
so has part: feature:862036-862131:-1:exon
so has part: feature:861586-861744:-1:exon
so has part: feature:860612-860725:-1:exon
so has part: feature:859910-860054:-1:exon
so has part: feature:859455-859576:-1:exon
so has part: feature:856404-856593:-1:exon
so has part: feature:855979-856085:-1:exon
so has part: feature:853573-853886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863486-863556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862699-862745:-1:exon

position:862699:-1
position: 862699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862036-862131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:861586-861744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860612-860725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859910-860054:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859455-859576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856404-856593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855979-856085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853573-853886:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X2
translation: MTDSEEESFVRLPDELTLENSPPEMTPERLQQEIEKCKERCQALEQDRLELGMAKEAAEQKTQGFQREAEFLRGKLEKETSLSRELEPSSQELCLAKAGRDKLLQEKQKLEKELEELEERRVAWEQQAKAPPSLPDRKMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEMKQHEVKLDESAGCEGRVRVQAEPVELLLPSALEIELKLSDRCVLLSSLPRLDLSEEQLLDKLELFFSKAKNGGGEVEQRELLRDSGHVVLTFAQDGVAEQLMKKGRIQVPIGKRTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILDEESMRDALEIHFQKPSRGGGEVDALGYVPVGGQGLAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(853695..853886,855979..856085,856404..856593,859455..859576,859910..860054,860612..860725,861586..861744,862036..862131,862714..862731))
location: region:853695-862731:-1
so has part: feature:862714-862731:-1:exon
so has part: feature:862036-862131:-1:exon
so has part: feature:861586-861744:-1:exon
so has part: feature:860612-860725:-1:exon
so has part: feature:859910-860054:-1:exon
so has part: feature:859455-859576:-1:exon
so has part: feature:856404-856593:-1:exon
so has part: feature:855979-856085:-1:exon
so has part: feature:853695-853886:-1:exon

XP_044855129.1
type: Protein
SIO_000068: ncbiprotein

position:853695:-1
position: 853695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862731:-1
position: 862731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862714-862731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862036-862131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861586-861744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860612-860725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:859910-860054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859455-859576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856404-856593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855979-856085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853695-853886:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X1
translation: MTDSEEVTGHQESFVRLPDELTLENSPPEMTPERLQQEIEKCKERCQALEQDRLELGMAKEAAEQKTQGFQREAEFLRGKLEKETSLSRELEPSSQELCLAKAGRDKLLQEKQKLEKELEELEERRVAWEQQAKAPPSLPDRKMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEMKQHEVKLDESAGCEGRVRVQAEPVELLLPSALEIELKLSDRCVLLSSLPRLDLSEEQLLDKLELFFSKAKNGGGEVEQRELLRDSGHVVLTFAQDGVAEQLMKKGRIQVPIGKRTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILDEESMRDALEIHFQKPSRGGGEVDALGYVPVGGQGLAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(853695..853886,855979..856085,856404..856593,859455..859576,859910..860054,860612..860725,861586..861744,862036..862131,862699..862731))
location: region:853695-862731:-1
so has part: feature:862699-862731:-1:exon
so has part: feature:862036-862131:-1:exon
so has part: feature:861586-861744:-1:exon
so has part: feature:860612-860725:-1:exon
so has part: feature:859910-860054:-1:exon
so has part: feature:859455-859576:-1:exon
so has part: feature:856404-856593:-1:exon
so has part: feature:855979-856085:-1:exon
so has part: feature:853695-853886:-1:exon

XP_044855128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:862699-862731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862036-862131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861586-861744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860612-860725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:859910-860054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859455-859576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856404-856593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855979-856085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853695-853886:-1:exon

RPL27
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: RPL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(864830..869794)
location: region:864830-869794:-1
so has part: feature:864830-869794:-1:exon
subclass of: SO_0000010

123356186
type: Gene
SIO_000068: ncbigene

position:864830:-1
position: 864830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869794:-1
position: 869794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864830-869794:-1:exon

RPL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: RPL27
product: ribosomal protein L27
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999149.1
SIO_010081: RPL27
subclass of: SO_0000673
so part of: RPL27
location: complement(join(864830..864920,866584..866694,867513..867682,869071..869153,869718..869794))
location: region:864830-869794:-1
so has part: feature:869718-869794:-1:exon
so has part: feature:869071-869153:-1:exon
so has part: feature:867513-867682:-1:exon
so has part: feature:866584-866694:-1:exon
so has part: feature:864830-864920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869718-869794:-1:exon

position:869718:-1
position: 869718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869071-869153:-1:exon

position:869071:-1
position: 869071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869153:-1
position: 869153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867513-867682:-1:exon

position:867513:-1
position: 867513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867682:-1
position: 867682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866584-866694:-1:exon

position:866584:-1
position: 866584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866694:-1
position: 866694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864830-864920:-1:exon

position:864920:-1
position: 864920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: RPL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L27
translation: MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
SIO_010081: RPL27
subclass of: SO_0000673
so part of: RPL27
location: complement(join(864872..864920,866584..866694,867513..867682,869071..869151))
location: region:864872-869151:-1
so has part: feature:869071-869151:-1:exon
so has part: feature:867513-867682:-1:exon
so has part: feature:866584-866694:-1:exon
so has part: feature:864872-864920:-1:exon

XP_044855084.1
type: Protein
SIO_000068: ncbiprotein

position:864872:-1
position: 864872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869151:-1
position: 869151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869071-869151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867513-867682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866584-866694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864872-864920:-1:exon

RUNDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: RUNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870738..879184)
location: region:870738-879184:-1
so has part: feature:870738-879184:-1:exon
subclass of: SO_0000010

123356474
type: Gene
SIO_000068: ncbigene

position:870738:-1
position: 870738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879184:-1
position: 879184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870738-879184:-1:exon

RUNDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: RUNDC1
product: RUN domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999759.1
SIO_010081: RUNDC1
subclass of: SO_0000673
so part of: RUNDC1
location: complement(join(870738..874036,875021..875134,875475..875673,875965..876123,878849..879184))
location: region:870738-879184:-1
so has part: feature:878849-879184:-1:exon
so has part: feature:875965-876123:-1:exon
so has part: feature:875475-875673:-1:exon
so has part: feature:875021-875134:-1:exon
so has part: feature:870738-874036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878849-879184:-1:exon

position:878849:-1
position: 878849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875965-876123:-1:exon

position:875965:-1
position: 875965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876123:-1
position: 876123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875475-875673:-1:exon

position:875475:-1
position: 875475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875673:-1
position: 875673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875021-875134:-1:exon

position:875021:-1
position: 875021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875134:-1
position: 875134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870738-874036:-1:exon

position:874036:-1
position: 874036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUNDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: RUNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 1
translation: MEAEGGALGPGERWAPVGAVAEADEAEGPGGPGSGPGSPGGSPRSLPRLRAERRRLHGALLALVSHFAQVQFRLRQVARAGPAEQQRLLRDLEDFAFRGCPAALGDGLGEAPGERENQERIEARKEKQRELIMQLKTQLDDLETFAYQEGSYDSLPQSMVMERQRVIIEELIKKLDMNLNEDIASLSPEELRQQVDVAVAQIVNPARVKEQLVEQLKTQIRDLEMFISFIQDEVGSPGQVEDGHCECSGRKHGSGPYKPNARLPPRNNRVNPEDARKMRETGLHLMRRMLAVLQIFAVSQFGCATGQIPRTLWQKDQASRDYSPLIKKLELSVDQVRQLALKHQHQDHVLSYSSMQDVSLGARDELTLAVRKELTIAIRDLMAHGLYASSQGMSLVLAPIACLIPAFTSSPQTMHPWELFVKYYNTKNGRAFVESPARKLSQSFALPVTGGITVTPKQSLLTAIHTVLTEHDPFKRSADSELKALVCMALNEQRLVSWVNLICKSGALIQSHYQPWSYMANAGFESALNILSRLSNLKFNLPVDLAVRQLKNIRDAF
SIO_010081: RUNDC1
subclass of: SO_0000673
so part of: RUNDC1
location: complement(join(873171..874036,875021..875134,875475..875673,875965..876123,878849..879184))
location: region:873171-879184:-1
so has part: feature:878849-879184:-1:exon
so has part: feature:875965-876123:-1:exon
so has part: feature:875475-875673:-1:exon
so has part: feature:875021-875134:-1:exon
so has part: feature:873171-874036:-1:exon

XP_044855694.1
type: Protein
SIO_000068: ncbiprotein

position:873171:-1
position: 873171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878849-879184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875965-876123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875475-875673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875021-875134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873171-874036:-1:exon

LOC123356222
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 883546..899323
location: region:883546-899323:1
so has part: feature:883546-899323:1:exon
subclass of: SO_0000010

123356222
type: Gene
SIO_000068: ncbigene

position:883546:1
position: 883546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899323:1
position: 899323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883546-899323:1:exon

LOC123356222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356222
product: putative protein PTGES3L, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999244.1
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(883546..883635,886241..886372,886525..886591,887243..887341,888078..888167,889613..889666,890464..890492,890934..891514)
location: region:883546-891514:1
so has part: feature:883546-883635:1:exon
so has part: feature:886241-886372:1:exon
so has part: feature:886525-886591:1:exon
so has part: feature:887243-887341:1:exon
so has part: feature:888078-888167:1:exon
so has part: feature:889613-889666:1:exon
so has part: feature:890464-890492:1:exon
so has part: feature:890934-891514:1:exon

position:891514:1
position: 891514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883546-883635:1:exon

position:883635:1
position: 883635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886241-886372:1:exon

position:886241:1
position: 886241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886372:1
position: 886372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886525-886591:1:exon

position:886525:1
position: 886525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886591:1
position: 886591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887243-887341:1:exon

position:887243:1
position: 887243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887341:1
position: 887341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888078-888167:1:exon

position:888078:1
position: 888078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888167:1
position: 888167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889613-889666:1:exon

position:889613:1
position: 889613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889666:1
position: 889666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890464-890492:1:exon

position:890464:1
position: 890464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890492:1
position: 890492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890934-891514:1:exon

position:890934:1
position: 890934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356222
product: putative protein PTGES3L, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999245.1
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(883613..883635,886241..886372,886525..886591,887243..887341,888078..888167,889613..889666,892225..892350,892440..892599,894007..894064,894451..894607,894739..894855,895477..895607,895795..895861,896105..896196,896928..896982,897567..897661,898258..899323)
location: region:883613-899323:1
so has part: feature:883613-883635:1:exon
so has part: feature:886241-886372:1:exon
so has part: feature:886525-886591:1:exon
so has part: feature:887243-887341:1:exon
so has part: feature:888078-888167:1:exon
so has part: feature:889613-889666:1:exon
so has part: feature:892225-892350:1:exon
so has part: feature:892440-892599:1:exon
so has part: feature:894007-894064:1:exon
so has part: feature:894451-894607:1:exon
so has part: feature:894739-894855:1:exon
so has part: feature:895477-895607:1:exon
so has part: feature:895795-895861:1:exon
so has part: feature:896105-896196:1:exon
so has part: feature:896928-896982:1:exon
so has part: feature:897567-897661:1:exon
so has part: feature:898258-899323:1:exon

position:883613:1
position: 883613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883613-883635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886241-886372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886525-886591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887243-887341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888078-888167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889613-889666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892225-892350:1:exon

position:892225:1
position: 892225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892350:1
position: 892350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:892440-892599:1:exon

position:892440:1
position: 892440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892599:1
position: 892599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:894007-894064:1:exon

position:894007:1
position: 894007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894064:1
position: 894064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:894451-894607:1:exon

position:894451:1
position: 894451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894607:1
position: 894607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:894739-894855:1:exon

position:894739:1
position: 894739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894855:1
position: 894855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:895477-895607:1:exon

position:895477:1
position: 895477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895607:1
position: 895607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:895795-895861:1:exon

position:895795:1
position: 895795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895861:1
position: 895861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:896105-896196:1:exon

position:896105:1
position: 896105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896196:1
position: 896196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:896928-896982:1:exon

position:896928:1
position: 896928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896982:1
position: 896982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:897567-897661:1:exon

position:897567:1
position: 897567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897661:1
position: 897661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:898258-899323:1:exon

position:898258:1
position: 898258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like isoform X3
translation: MARVSCLPRQPAKTLWYDRPRYVFLEFCVEDSTDVKVDIDDHRVVFSCKNADGVEMYNEINLYARVNSKDSQQKRSDRSITCFIRKWKEKVAWPRLTKENIKPVWLFVDFDNWRDWEGDEEAEMAMAEQYAELLQKVTVKGTPPAMDDLDFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIADIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRRRGLPENHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSEVVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(883628..883635,886241..886372,886525..886591,887243..887341,888078..888167,889613..889666,892225..892350,892440..892599,894007..894064,894451..894607,894739..894855,895477..895607,895795..895861,896105..896196,896928..896982,897567..897661,898258..898393)
location: region:883628-898393:1
so has part: feature:883628-883635:1:exon
so has part: feature:886241-886372:1:exon
so has part: feature:886525-886591:1:exon
so has part: feature:887243-887341:1:exon
so has part: feature:888078-888167:1:exon
so has part: feature:889613-889666:1:exon
so has part: feature:892225-892350:1:exon
so has part: feature:892440-892599:1:exon
so has part: feature:894007-894064:1:exon
so has part: feature:894451-894607:1:exon
so has part: feature:894739-894855:1:exon
so has part: feature:895477-895607:1:exon
so has part: feature:895795-895861:1:exon
so has part: feature:896105-896196:1:exon
so has part: feature:896928-896982:1:exon
so has part: feature:897567-897661:1:exon
so has part: feature:898258-898393:1:exon

XP_044855180.1
type: Protein
SIO_000068: ncbiprotein

position:883628:1
position: 883628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898393:1
position: 898393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883628-883635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886241-886372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886525-886591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887243-887341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888078-888167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889613-889666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892225-892350:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892440-892599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:894007-894064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:894451-894607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894739-894855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895477-895607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895795-895861:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:896105-896196:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896928-896982:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:897567-897661:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:898258-898393:1:exon

LOC123356222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein PTGES3L isoform X2
translation: MARVSCLPRQPAKTLWYDRPRYVFLEFCVEDSTDVKVDIDDHRVVFSCKNADGVEMYNEINLYARVNSKDSQQKRSDRSITCFIRKWKEKVAWPRLTKENIKPVWLFVDFDNWRDWEGDEEAEMAMAEQYAELLQKVTVKGTPPAMDDLDDDI
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(883628..883635,886241..886372,886525..886591,887243..887341,888078..888167,889613..889666,890464..890475)
location: region:883628-890475:1
so has part: feature:883628-883635:1:exon
so has part: feature:886241-886372:1:exon
so has part: feature:886525-886591:1:exon
so has part: feature:887243-887341:1:exon
so has part: feature:888078-888167:1:exon
so has part: feature:889613-889666:1:exon
so has part: feature:890464-890475:1:exon

XP_044855179.1
type: Protein
SIO_000068: ncbiprotein

position:890475:1
position: 890475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883628-883635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886241-886372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886525-886591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887243-887341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888078-888167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889613-889666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890464-890475:1:exon

LOC123356222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356222
product: putative protein PTGES3L, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999243.1
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(892024..892096,892225..892350,892440..892599,894007..894064,894451..894607,894739..894855,895477..895607,895795..895861,896105..896196,896928..896982,897567..897661,898258..899323)
location: region:892024-899323:1
so has part: feature:892024-892096:1:exon
so has part: feature:892225-892350:1:exon
so has part: feature:892440-892599:1:exon
so has part: feature:894007-894064:1:exon
so has part: feature:894451-894607:1:exon
so has part: feature:894739-894855:1:exon
so has part: feature:895477-895607:1:exon
so has part: feature:895795-895861:1:exon
so has part: feature:896105-896196:1:exon
so has part: feature:896928-896982:1:exon
so has part: feature:897567-897661:1:exon
so has part: feature:898258-899323:1:exon

position:892024:1
position: 892024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892024-892096:1:exon

position:892096:1
position: 892096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892225-892350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892440-892599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:894007-894064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894451-894607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894739-894855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895477-895607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895795-895861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896105-896196:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896928-896982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897567-897661:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898258-899323:1:exon

LOC123356222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like isoform X1
translation: MVFQCQRDSWARQFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIADIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRRRGLPENHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSEVVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC123356222
subclass of: SO_0000673
so part of: LOC123356222
location: join(892058..892096,892225..892350,892440..892599,894007..894064,894451..894607,894739..894855,895477..895607,895795..895861,896105..896196,896928..896982,897567..897661,898258..898393)
location: region:892058-898393:1
so has part: feature:892058-892096:1:exon
so has part: feature:892225-892350:1:exon
so has part: feature:892440-892599:1:exon
so has part: feature:894007-894064:1:exon
so has part: feature:894451-894607:1:exon
so has part: feature:894739-894855:1:exon
so has part: feature:895477-895607:1:exon
so has part: feature:895795-895861:1:exon
so has part: feature:896105-896196:1:exon
so has part: feature:896928-896982:1:exon
so has part: feature:897567-897661:1:exon
so has part: feature:898258-898393:1:exon

XP_044855178.1
type: Protein
SIO_000068: ncbiprotein

position:892058:1
position: 892058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892058-892096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892225-892350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892440-892599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:894007-894064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894451-894607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894739-894855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895477-895607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895795-895861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896105-896196:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896928-896982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897567-897661:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898258-898393:1:exon

LOC123356226
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901822..906945)
location: region:901822-906945:-1
so has part: feature:901822-906945:-1:exon
subclass of: SO_0000010

123356226
type: Gene
SIO_000068: ncbigene

position:901822:-1
position: 901822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906945:-1
position: 906945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901822-906945:-1:exon

LOC123356226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356226
product: glucose-6-phosphatase catalytic subunit 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999250.1
SIO_010081: LOC123356226
subclass of: SO_0000673
so part of: LOC123356226
location: complement(join(901822..903085,903891..904006,905604..905709,905804..905913,906683..906945))
location: region:901822-906945:-1
so has part: feature:906683-906945:-1:exon
so has part: feature:905804-905913:-1:exon
so has part: feature:905604-905709:-1:exon
so has part: feature:903891-904006:-1:exon
so has part: feature:901822-903085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906683-906945:-1:exon

position:906683:-1
position: 906683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905804-905913:-1:exon

position:905804:-1
position: 905804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905913:-1
position: 905913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905604-905709:-1:exon

position:905604:-1
position: 905604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905709:-1
position: 905709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:903891-904006:-1:exon

position:903891:-1
position: 903891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904006:-1
position: 904006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901822-903085:-1:exon

position:903085:-1
position: 903085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like isoform X1
translation: MDLLHSAGVQVVQYLQENYQGSQDWFLFISFAADLKTTFFIFFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYGNASTPVIQQFLLTCETGPGSPSGHAMGSAGVCYVMVTALLPCTRGTRHGSCAARCRRGLLWLVFWAVQVCVCLSRVFLAAHFPHQVIAGVISGMAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWSVEKAKRWCDRPEWIHIETTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFDLPTDRELLFYVLSFCKSAAAHLCAVALIPYCIAQVLRRGDKKIL
SIO_010081: LOC123356226
subclass of: SO_0000673
so part of: LOC123356226
location: complement(join(902574..903085,903891..904006,905604..905709,905804..905913,906683..906900))
location: region:902574-906900:-1
so has part: feature:906683-906900:-1:exon
so has part: feature:905804-905913:-1:exon
so has part: feature:905604-905709:-1:exon
so has part: feature:903891-904006:-1:exon
so has part: feature:902574-903085:-1:exon

XP_044855185.1
type: Protein
SIO_000068: ncbiprotein

position:902574:-1
position: 902574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906900:-1
position: 906900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906683-906900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905804-905913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905604-905709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903891-904006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902574-903085:-1:exon

LOC123356227
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902672..910443
location: region:902672-910443:1
so has part: feature:902672-910443:1:exon
subclass of: SO_0000011

123356227
type: Gene
SIO_000068: ncbigene

position:902672:1
position: 902672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910443:1
position: 910443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902672-910443:1:exon

LOC123356227
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 74926
nc RNA class: lncRNA
gene: LOC123356227
product: uncharacterized LOC123356227
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006575300.1
SIO_010081: LOC123356227
subclass of: SO_0000673
so part of: LOC123356227
location: join(902672..902726,910309..910443)
location: region:902672-910443:1
so has part: feature:902672-902726:1:exon
so has part: feature:910309-910443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902672-902726:1:exon

position:902726:1
position: 902726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910309-910443:1:exon

position:910309:1
position: 910309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356226
product: glucose-6-phosphatase catalytic subunit 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_044999251.1
SIO_010081: LOC123356226
subclass of: SO_0000673
so part of: LOC123356226
location: complement(join(903092..903240,903891..904006,905604..905709,905804..905913,906683..906945))
location: region:903092-906945:-1
so has part: feature:906683-906945:-1:exon
so has part: feature:905804-905913:-1:exon
so has part: feature:905604-905709:-1:exon
so has part: feature:903891-904006:-1:exon
so has part: feature:903092-903240:-1:exon

position:903092:-1
position: 903092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906683-906945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905804-905913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905604-905709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903891-904006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903092-903240:-1:exon

position:903240:-1
position: 903240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like isoform X2
translation: MDLLHSAGVQVVQYLQENYQGSQDWFLFISFAADLKTTFFIFFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYGNASTPVIQQFLLTCETGPGSPSGHAMGSAGVCYVMVTALLPCTRGTRHGSCAARCRRGLLWLVFWAVQVCVCLSRVFLAAHFPHQVIAGVISV
SIO_010081: LOC123356226
subclass of: SO_0000673
so part of: LOC123356226
location: complement(join(903236..903240,903891..904006,905604..905709,905804..905913,906683..906900))
location: region:903236-906900:-1
so has part: feature:906683-906900:-1:exon
so has part: feature:905804-905913:-1:exon
so has part: feature:905604-905709:-1:exon
so has part: feature:903891-904006:-1:exon
so has part: feature:903236-903240:-1:exon

XP_044855186.1
type: Protein
SIO_000068: ncbiprotein

position:903236:-1
position: 903236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906683-906900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905804-905913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905604-905709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903891-904006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903236-903240:-1:exon

LOC123356225
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(910141..917513)
location: region:910141-917513:-1
so has part: feature:910141-917513:-1:exon
subclass of: SO_0000010

123356225
type: Gene
SIO_000068: ncbigene

position:910141:-1
position: 910141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917513:-1
position: 917513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910141-917513:-1:exon

LOC123356225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356225
product: glucose-6-phosphatase catalytic subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999249.1
SIO_010081: LOC123356225
subclass of: SO_0000673
so part of: LOC123356225
location: complement(join(910141..910667,911914..912029,912767..912872,914034..914143,917269..917513))
location: region:910141-917513:-1
so has part: feature:917269-917513:-1:exon
so has part: feature:914034-914143:-1:exon
so has part: feature:912767-912872:-1:exon
so has part: feature:911914-912029:-1:exon
so has part: feature:910141-910667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917269-917513:-1:exon

position:917269:-1
position: 917269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914034-914143:-1:exon

position:914034:-1
position: 914034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914143:-1
position: 914143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912767-912872:-1:exon

position:912767:-1
position: 912767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912872:-1
position: 912872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:911914-912029:-1:exon

position:911914:-1
position: 911914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912029:-1
position: 912029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:910141-910667:-1:exon

position:910667:-1
position: 910667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: METGMDFIHSSGVQMTRYLQENYQGSQGWFLFISFAADLRNTFFILFPIWLHLCEAVGVELIWVAVIGDWLNLVFKWILFGQRPYWWVRETGYYGNTSSPVIQQFPVTCETGPGSPSGHAMGSAGVCYVMVMALLSTLRRRRRSPFQQQCLRGALWMSFWGVQVSVSLSRIFLAAHFPHQVLTGVVSGMAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWIHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFKPPTKVELLFYVLSFCKSAAVPVAAAGLIPYCVARLIRRQEEKVL
SIO_010081: LOC123356225
subclass of: SO_0000673
so part of: LOC123356225
location: complement(join(910156..910667,911914..912029,912767..912872,914034..914143,917269..917498))
location: region:910156-917498:-1
so has part: feature:917269-917498:-1:exon
so has part: feature:914034-914143:-1:exon
so has part: feature:912767-912872:-1:exon
so has part: feature:911914-912029:-1:exon
so has part: feature:910156-910667:-1:exon

XP_044855184.1
type: Protein
SIO_000068: ncbiprotein

position:910156:-1
position: 910156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917498:-1
position: 917498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917269-917498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914034-914143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912767-912872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911914-912029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:910156-910667:-1:exon

LOC123356223
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(926688..934903)
location: region:926688-934903:-1
so has part: feature:926688-934903:-1:exon
subclass of: SO_0000010

123356223
type: Gene
SIO_000068: ncbigene

position:926688:-1
position: 926688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934903:-1
position: 934903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926688-934903:-1:exon

LOC123356223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356223
product: glucose-6-phosphatase catalytic subunit 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999247.1
SIO_010081: LOC123356223
subclass of: SO_0000673
so part of: LOC123356223
location: complement(join(926688..927903,929235..929350,930140..930245,933508..933617,934592..934903))
location: region:926688-934903:-1
so has part: feature:934592-934903:-1:exon
so has part: feature:933508-933617:-1:exon
so has part: feature:930140-930245:-1:exon
so has part: feature:929235-929350:-1:exon
so has part: feature:926688-927903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934592-934903:-1:exon

position:934592:-1
position: 934592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933508-933617:-1:exon

position:933508:-1
position: 933508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933617:-1
position: 933617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930140-930245:-1:exon

position:930140:-1
position: 930140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930245:-1
position: 930245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:929235-929350:-1:exon

position:929235:-1
position: 929235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929350:-1
position: 929350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926688-927903:-1:exon

position:927903:-1
position: 927903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: MEAGMNVLHDMGIQATRYLQENYQGSQDWFLFISFAADLRNTFFILFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVRETSYYGNASSPAIQQFPLTCETGPGSPSGHAMGSAGVYYVMVTAILSIALRKKQLTIKDQFLRTALWAGFWAVQVCVCLSRVFIAAHFPHQVIAGVISGMAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWIHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFKPPTKVELLFYVLSFCKSAAVPVAAAGLIPYCVAQVLSQQDKKAV
SIO_010081: LOC123356223
subclass of: SO_0000673
so part of: LOC123356223
location: complement(join(927392..927903,929235..929350,930140..930245,933508..933617,934592..934821))
location: region:927392-934821:-1
so has part: feature:934592-934821:-1:exon
so has part: feature:933508-933617:-1:exon
so has part: feature:930140-930245:-1:exon
so has part: feature:929235-929350:-1:exon
so has part: feature:927392-927903:-1:exon

XP_044855182.1
type: Protein
SIO_000068: ncbiprotein

position:927392:-1
position: 927392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934821:-1
position: 934821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934592-934821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933508-933617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930140-930245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929235-929350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927392-927903:-1:exon

LOC123356219
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(934929..968752)
location: region:934929-968752:-1
so has part: feature:934929-968752:-1:exon
subclass of: SO_0000010

123356219
type: Gene
SIO_000068: ncbigene

position:934929:-1
position: 934929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968752:-1
position: 968752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934929-968752:-1:exon

LOC123356219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356219
product: membrane primary amine oxidase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999239.1
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(934929..934975,957637..960298,960569..960698,962382..962667,966856..968752))
location: region:934929-968752:-1
so has part: feature:966856-968752:-1:exon
so has part: feature:962382-962667:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:957637-960298:-1:exon
so has part: feature:934929-934975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966856-968752:-1:exon

position:966856:-1
position: 966856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962382-962667:-1:exon

position:962382:-1
position: 962382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962667:-1
position: 962667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960569-960698:-1:exon

position:960569:-1
position: 960569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960698:-1
position: 960698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957637-960298:-1:exon

position:957637:-1
position: 957637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960298:-1
position: 960298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:934929-934975:-1:exon

position:934975:-1
position: 934975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356224
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938245..946400)
location: region:938245-946400:-1
so has part: feature:938245-946400:-1:exon
subclass of: SO_0000010

123356224
type: Gene
SIO_000068: ncbigene

position:938245:-1
position: 938245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946400:-1
position: 946400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938245-946400:-1:exon

LOC123356224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356224
product: glucose-6-phosphatase catalytic subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_044999248.1
SIO_010081: LOC123356224
subclass of: SO_0000673
so part of: LOC123356224
location: complement(join(938245..939412,940744..940859,941649..941754,945016..945125,946091..946400))
location: region:938245-946400:-1
so has part: feature:946091-946400:-1:exon
so has part: feature:945016-945125:-1:exon
so has part: feature:941649-941754:-1:exon
so has part: feature:940744-940859:-1:exon
so has part: feature:938245-939412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946091-946400:-1:exon

position:946091:-1
position: 946091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945016-945125:-1:exon

position:945016:-1
position: 945016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945125:-1
position: 945125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:941649-941754:-1:exon

position:941649:-1
position: 941649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941754:-1
position: 941754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940744-940859:-1:exon

position:940744:-1
position: 940744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940859:-1
position: 940859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:938245-939412:-1:exon

position:939412:-1
position: 939412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase catalytic subunit 1-like
translation: MEAGMNVLHDMGIQATRYLQENYQGSQDWFLFISFAADLRNTFFILFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVRETSYYGNASSPAIQQFPLTCETGPGSPSGHAMGSAGVYYVMVTAILSIALRKKQLTMKDQFLRTALWAGFWAVQVCVCLSRVFIAAHFPHQVIAGVISGMAVAEAFRHIPSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWIHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLLVLHLFDSFKPPTKVELLFYVLSFCKSAAVPVAAAGLIPYCVAQVLSQQDKKAV
SIO_010081: LOC123356224
subclass of: SO_0000673
so part of: LOC123356224
location: complement(join(938901..939412,940744..940859,941649..941754,945016..945125,946091..946320))
location: region:938901-946320:-1
so has part: feature:946091-946320:-1:exon
so has part: feature:945016-945125:-1:exon
so has part: feature:941649-941754:-1:exon
so has part: feature:940744-940859:-1:exon
so has part: feature:938901-939412:-1:exon

XP_044855183.1
type: Protein
SIO_000068: ncbiprotein

position:938901:-1
position: 938901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946320:-1
position: 946320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946091-946320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945016-945125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941649-941754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940744-940859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:938901-939412:-1:exon

LOC123356219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356219
product: membrane primary amine oxidase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_044999240.1
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(949432..952942,957637..960298,960569..960698,962382..962667,966121..966251))
location: region:949432-966251:-1
so has part: feature:966121-966251:-1:exon
so has part: feature:962382-962667:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:957637-960298:-1:exon
so has part: feature:949432-952942:-1:exon

position:949432:-1
position: 949432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966251:-1
position: 966251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966121-966251:-1:exon

position:966121:-1
position: 966121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962382-962667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960569-960698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957637-960298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949432-952942:-1:exon

position:952942:-1
position: 952942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356219
product: membrane primary amine oxidase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999238.1
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(951669..952942,957637..960298,960569..960698,962382..962667,966856..968752))
location: region:951669-968752:-1
so has part: feature:966856-968752:-1:exon
so has part: feature:962382-962667:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:957637-960298:-1:exon
so has part: feature:951669-952942:-1:exon

position:951669:-1
position: 951669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966856-968752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962382-962667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960569-960698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957637-960298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:951669-952942:-1:exon

LOC123356219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X1
translation: MNLKTVLILLVLALATIFALVCVLLTRGVKPASCEPQSLSSQEGKHSDQSLVFADLTPEEMVQVVTYLQENLGVPLVDASQANPSDNCIYYIDVQLPTKAEALGFLDRGGRRPPRQALAVVYFGNQTDPNVTEYVVSPLPKPTTHQDITVQKYGGKLPYHRRPVTEKEYKDIDRFVYQEFSKAPGLLRECCDYDETNFATLTTAPRGFQSGDRATWFVLFQNVNGSGYYLHPVGLEVLVNHSSLDASQWRISKVFYNGKYYEDMEQLETEFIQGRVKDVKVKKVQPDEEFGSMRPRAAPMAPGPLQYEPRGPRYSIQNNHVIFQSWSFAFGMDVNTGPRLFDIKFNGERIVYELSLQEALAVYGSNCPGGMVTRYMDGSFGIGKFAFELVRGVDCPYTATYVDRHYLVESETPKVNKNSLCIFEQDTSVPLRRHYSNLQSLYYGGLTKYALVLRAISTLINYDYVWDFIFYQNGAIEVKIHATGYISSSFLYGTGTEHGSQVGEHTLGTMHNHLINYKVDLDVGGTKNSLVAHDMTFDTVQAPWSPEHQIQRPWLTKKVLDTEDKAVFPLHSKIPRYIHFTTNRENKWGHQRGYRIQIVSFAGDHLPEASSMERSISWGRYKLAVTKRKEEEPTSTSIYNQNDPWTPTVAFADFIDNETIVNEDLVAWISVGFLHVPHTEDIPNTVTVGNGVGFFLRPYNYFDEDPSVHSPDGIYFRSDQDPSMCKVNPVACLSKTASCSPALPAFTYNGFRNQTGP
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(960014..960298,960569..960698,962382..962667,966856..968428))
location: region:960014-968428:-1
so has part: feature:966856-968428:-1:exon
so has part: feature:962382-962667:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:960014-960298:-1:exon

XP_044855173.1
type: Protein
SIO_000068: ncbiprotein

position:960014:-1
position: 960014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968428:-1
position: 968428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966856-968428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962382-962667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960569-960698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960014-960298:-1:exon

LOC123356219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X1
translation: MNLKTVLILLVLALATIFALVCVLLTRGVKPASCEPQSLSSQEGKHSDQSLVFADLTPEEMVQVVTYLQENLGVPLVDASQANPSDNCIYYIDVQLPTKAEALGFLDRGGRRPPRQALAVVYFGNQTDPNVTEYVVSPLPKPTTHQDITVQKYGGKLPYHRRPVTEKEYKDIDRFVYQEFSKAPGLLRECCDYDETNFATLTTAPRGFQSGDRATWFVLFQNVNGSGYYLHPVGLEVLVNHSSLDASQWRISKVFYNGKYYEDMEQLETEFIQGRVKDVKVKKVQPDEEFGSMRPRAAPMAPGPLQYEPRGPRYSIQNNHVIFQSWSFAFGMDVNTGPRLFDIKFNGERIVYELSLQEALAVYGSNCPGGMVTRYMDGSFGIGKFAFELVRGVDCPYTATYVDRHYLVESETPKVNKNSLCIFEQDTSVPLRRHYSNLQSLYYGGLTKYALVLRAISTLINYDYVWDFIFYQNGAIEVKIHATGYISSSFLYGTGTEHGSQVGEHTLGTMHNHLINYKVDLDVGGTKNSLVAHDMTFDTVQAPWSPEHQIQRPWLTKKVLDTEDKAVFPLHSKIPRYIHFTTNRENKWGHQRGYRIQIVSFAGDHLPEASSMERSISWGRYKLAVTKRKEEEPTSTSIYNQNDPWTPTVAFADFIDNETIVNEDLVAWISVGFLHVPHTEDIPNTVTVGNGVGFFLRPYNYFDEDPSVHSPDGIYFRSDQDPSMCKVNPVACLSKTASCSPALPAFTYNGFRNQTGP
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(960014..960298,960569..960698,962382..962667,966856..968428))
location: region:960014-968428:-1
so has part: feature:966856-968428:-1:exon
so has part: feature:962382-962667:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:960014-960298:-1:exon

XP_044855174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966856-968428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962382-962667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960569-960698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960014-960298:-1:exon

LOC123356219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X2
translation: MTFDTVQAPWSPEHQIQRPWLTKKVLDTEDKAVFPLHSKIPRYIHFTTNRENKWGHQRGYRIQIVSFAGDHLPEASSMERSISWGRYKLAVTKRKEEEPTSTSIYNQNDPWTPTVAFADFIDNETIVNEDLVAWISVGFLHVPHTEDIPNTVTVGNGVGFFLRPYNYFDEDPSVHSPDGIYFRSDQDPSMCKVNPVACLSKTASCSPALPAFTYNGFRNQTGP
SIO_010081: LOC123356219
subclass of: SO_0000673
so part of: LOC123356219
location: complement(join(960014..960298,960569..960698,962382..962638))
location: region:960014-962638:-1
so has part: feature:962382-962638:-1:exon
so has part: feature:960569-960698:-1:exon
so has part: feature:960014-960298:-1:exon

XP_044855175.1
type: Protein
SIO_000068: ncbiprotein

position:962638:-1
position: 962638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962382-962638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:960569-960698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960014-960298:-1:exon

LOC123356220
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972852..986579)
location: region:972852-986579:-1
so has part: feature:972852-986579:-1:exon
subclass of: SO_0000010

123356220
type: Gene
SIO_000068: ncbigene

position:972852:-1
position: 972852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986579:-1
position: 986579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972852-986579:-1:exon

LOC123356220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356220
product: membrane primary amine oxidase-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999242.1
SIO_010081: LOC123356220
subclass of: SO_0000673
so part of: LOC123356220
location: complement(join(972852..973657,974166..974295,975429..975714,981415..982488,986084..986579))
location: region:972852-986579:-1
so has part: feature:986084-986579:-1:exon
so has part: feature:981415-982488:-1:exon
so has part: feature:975429-975714:-1:exon
so has part: feature:974166-974295:-1:exon
so has part: feature:972852-973657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986084-986579:-1:exon

position:986084:-1
position: 986084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:981415-982488:-1:exon

position:981415:-1
position: 981415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982488:-1
position: 982488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975429-975714:-1:exon

position:975429:-1
position: 975429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975714:-1
position: 975714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974166-974295:-1:exon

position:974166:-1
position: 974166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974295:-1
position: 974295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972852-973657:-1:exon

position:973657:-1
position: 973657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356220
product: membrane primary amine oxidase-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999241.1
SIO_010081: LOC123356220
subclass of: SO_0000673
so part of: LOC123356220
location: complement(join(972852..973657,974166..974295,975429..975714,981415..983235))
location: region:972852-983235:-1
so has part: feature:981415-983235:-1:exon
so has part: feature:975429-975714:-1:exon
so has part: feature:974166-974295:-1:exon
so has part: feature:972852-973657:-1:exon

position:983235:-1
position: 983235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981415-983235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975429-975714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974166-974295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972852-973657:-1:exon

LOC123356220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X2
translation: MNLKTVFILLVLALATIFALVCVLLTRGVKPASCEPQSLSSQEGKHSDQSLVFADLMPEEMVQVVRYLQRSLGVPLVDAYNANPSDNCIYYVDVQLPTKAEVLGFLDCGGRRPPRQALAVVYFGNQPDPNVTEYVVGPLPKPTTHQDITVQKYGGKLPYHRRPVLGKEYEQIEIFLQRETFSTAPTFLNQAFDYNGTNFVSLTSAPRGFQSGDRTTWFALFHNVSGYFLHPVGLEVLVDHSSLNVSQWRVRQVFYNGQYYGDLVQLESEFQQGRVKGVPVTRAPPDGGFSSMQPRAPPRAPFPLQYEPHGPRYSVRNNQIVSRAWSFAFGVNVNTGMRLFDIRFKGERIVYEISVQDAISVYGSNCPGGMSTRYMDGSFGIGRFTYPLVRGVDCPYSATYVDTHYLVETETPETHKNSICIFEQNSGSPLRRHYSNLQSLYYGGLTNSALVLRSIATLGNYDYVWDFIFYQNGAIEAKVQATGYMTTSFLYGDGLDYGNRVGDHTLGTVHTHSINYKVDLDVGGVNNTVVAHDMAFESVQAPWSPEHQIQRPRLTKAVLDTEDKAAFRLHSNMPRYIYFAANSKNKWGHRRGYRIQIVSFTGEHLPETSLMERAISWGRYKLAVTKRKEEEPTSSSIYNQNDPWMPTVAFADFINKETIVNEDLVAWITTGFLHIPHAEDIPNTVTVGNGVSIFLRPYNYYDIDPSIYSPDGVFFTSEQDSSVCEVNHVACLSKSASCLPALPPFTYDGFQNLTRL
SIO_010081: LOC123356220
subclass of: SO_0000673
so part of: LOC123356220
location: complement(join(973373..973657,974166..974295,975429..975714,981415..982488,986084..986579))
location: region:973373-986579:-1
so has part: feature:986084-986579:-1:exon
so has part: feature:981415-982488:-1:exon
so has part: feature:975429-975714:-1:exon
so has part: feature:974166-974295:-1:exon
so has part: feature:973373-973657:-1:exon

XP_044855177.1
type: Protein
SIO_000068: ncbiprotein

position:973373:-1
position: 973373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986084-986579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:981415-982488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975429-975714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974166-974295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973373-973657:-1:exon

LOC123356220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X1
translation: MNLKTVLILLVLALATIFALVCVLLTRGVKPASCEPQSLSSQEGKHSDQSLVFADLTPEEMVQVVRYLQRSLGVPLVDAYNANPSDNCIYYVDVQLPTKAEVLGFLDRGGRRPPRQALAVVYFGNQPDPNVTEYVVGPLPKPTTHQDITVQKYGGKLPYHRRPVLGKEYEQIEIFLQRETFSTAPTFLNQAFDYNGTNFVSLTSAPRGFQSGDRTTWFALFHNVSGYFLHPVGLEVLVDHSSLNVSQWRVRQVFYNGQYYGDLVQLESEFQQGRVKGVPVTRAPPDGGFSSMQPRAPPRAPFPLQYEPHGPRYSVRNNQIVSRAWSFAFGVNVNTGMRLFDIRFKGERIVYEISVQDAISVYGSNCPGGMSTRYMDGSFGIGRFTYPLVRGVDCPYSATYVDTHYLVETETPETHKNSICIFEQNSGSPLRRHYSNLQSLYYGGLTNSALVLRSIATLGNYDYVWDFIFYQNGAIEAKVQATGYMTTSFLYGDGLDYGNRVGDHTLGTVHTHSINYKVDLDVGGVNNTVVAHDMAFESVQAPWSPEHQIQRPRLTKAVLDTEDKAAFRLHSNMPRYIYFAANSKNKWGHRRGYRIQIVSFTGEHLPETSLMERAISWGRYKLAVTKRKEEEPTSSSIYNQNDPWMPTVAFADFINKETIVNEDLVAWITTGFLHIPHAEDIPNTVTVGNGVSIFLRPYNYYDIDPSIYSPDGVFFTSEQDSSVCEVNHVACLSKSASCLPALPPFTYDGFQNLTRL
SIO_010081: LOC123356220
subclass of: SO_0000673
so part of: LOC123356220
location: complement(join(973373..973657,974166..974295,975429..975714,981415..982984))
location: region:973373-982984:-1
so has part: feature:981415-982984:-1:exon
so has part: feature:975429-975714:-1:exon
so has part: feature:974166-974295:-1:exon
so has part: feature:973373-973657:-1:exon

XP_044855176.1
type: Protein
SIO_000068: ncbiprotein

position:982984:-1
position: 982984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981415-982984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975429-975714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974166-974295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:973373-973657:-1:exon

PSME3
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991250..1004931)
location: region:991250-1004931:-1
so has part: feature:991250-1004931:-1:exon
subclass of: SO_0000010

123356448
type: Gene
SIO_000068: ncbigene

position:991250:-1
position: 991250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004931:-1
position: 1004931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991250-1004931:-1:exon

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: PSME3
product: proteasome activator subunit 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999706.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(991250..992981,993525..993611,995735..995789,995958..996025,996690..996758,997791..997903,999068..999116,999416..999520,999931..999993,1000402..1000434,1004718..1004931))
location: region:991250-1004931:-1
so has part: feature:1004718-1004931:-1:exon
so has part: feature:1000402-1000434:-1:exon
so has part: feature:999931-999993:-1:exon
so has part: feature:999416-999520:-1:exon
so has part: feature:999068-999116:-1:exon
so has part: feature:997791-997903:-1:exon
so has part: feature:996690-996758:-1:exon
so has part: feature:995958-996025:-1:exon
so has part: feature:995735-995789:-1:exon
so has part: feature:993525-993611:-1:exon
so has part: feature:991250-992981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004718-1004931:-1:exon

position:1004718:-1
position: 1004718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000402-1000434:-1:exon

position:1000402:-1
position: 1000402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000434:-1
position: 1000434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:999931-999993:-1:exon

position:999931:-1
position: 999931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999993:-1
position: 999993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:999416-999520:-1:exon

position:999416:-1
position: 999416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999520:-1
position: 999520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:999068-999116:-1:exon

position:999068:-1
position: 999068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999116:-1
position: 999116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:997791-997903:-1:exon

position:997791:-1
position: 997791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997903:-1
position: 997903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:996690-996758:-1:exon

position:996690:-1
position: 996690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996758:-1
position: 996758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:995958-996025:-1:exon

position:995958:-1
position: 995958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996025:-1
position: 996025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:995735-995789:-1:exon

position:995735:-1
position: 995735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995789:-1
position: 995789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:993525-993611:-1:exon

position:993525:-1
position: 993525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993611:-1
position: 993611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:991250-992981:-1:exon

position:992981:-1
position: 992981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 3
translation: MRAGKNGHVGKASSGIGGGYCEVSSGGGEAGGSDGRERDRERERDKGAPGPAPPAMASLLKVDPEVKLKVDSFRERITSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPNMKKRKLEDCEETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(992901..992981,993525..993611,995735..995789,995958..996025,996690..996758,997791..997903,999068..999116,999416..999520,999931..999993,1000402..1000434,1004718..1004924))
location: region:992901-1004924:-1
so has part: feature:1004718-1004924:-1:exon
so has part: feature:1000402-1000434:-1:exon
so has part: feature:999931-999993:-1:exon
so has part: feature:999416-999520:-1:exon
so has part: feature:999068-999116:-1:exon
so has part: feature:997791-997903:-1:exon
so has part: feature:996690-996758:-1:exon
so has part: feature:995958-996025:-1:exon
so has part: feature:995735-995789:-1:exon
so has part: feature:993525-993611:-1:exon
so has part: feature:992901-992981:-1:exon

XP_044855641.1
type: Protein
SIO_000068: ncbiprotein

position:992901:-1
position: 992901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004924:-1
position: 1004924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004718-1004924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000402-1000434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:999931-999993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999416-999520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999068-999116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997791-997903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:996690-996758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:995958-996025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:995735-995789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:993525-993611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:992901-992981:-1:exon

BECN1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1006292..1011595
location: region:1006292-1011595:1
so has part: feature:1006292-1011595:1:exon
subclass of: SO_0000010

123356506
type: Gene
SIO_000068: ncbigene

position:1006292:1
position: 1006292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011595:1
position: 1011595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006292-1011595:1:exon

BECN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: BECN1
product: beclin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999814.1
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: join(1006292..1006543,1006937..1007004,1007228..1007286,1008031..1008121,1008402..1008538,1008725..1008919,1009207..1009353,1009884..1010033,1010118..1010178,1010669..1010811,1011352..1011595)
location: region:1006292-1011595:1
so has part: feature:1006292-1006543:1:exon
so has part: feature:1006937-1007004:1:exon
so has part: feature:1007228-1007286:1:exon
so has part: feature:1008031-1008121:1:exon
so has part: feature:1008402-1008538:1:exon
so has part: feature:1008725-1008919:1:exon
so has part: feature:1009207-1009353:1:exon
so has part: feature:1009884-1010033:1:exon
so has part: feature:1010118-1010178:1:exon
so has part: feature:1010669-1010811:1:exon
so has part: feature:1011352-1011595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006292-1006543:1:exon

position:1006543:1
position: 1006543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006937-1007004:1:exon

position:1006937:1
position: 1006937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007004:1
position: 1007004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007228-1007286:1:exon

position:1007228:1
position: 1007228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007286:1
position: 1007286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1008031-1008121:1:exon

position:1008031:1
position: 1008031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008121:1
position: 1008121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1008402-1008538:1:exon

position:1008402:1
position: 1008402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008538:1
position: 1008538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1008725-1008919:1:exon

position:1008725:1
position: 1008725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008919:1
position: 1008919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1009207-1009353:1:exon

position:1009207:1
position: 1009207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009353:1
position: 1009353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1009884-1010033:1:exon

position:1009884:1
position: 1009884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010033:1
position: 1010033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1010118-1010178:1:exon

position:1010118:1
position: 1010118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010178:1
position: 1010178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1010669-1010811:1:exon

position:1010669:1
position: 1010669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010811:1
position: 1010811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1011352-1011595:1:exon

position:1011352:1
position: 1011352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BECN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beclin-1
translation: MEGSKSSACTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAPAKPGDIHEEETNLTEEAFTENRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNITENECQNYKRCLEILEQMNEDDKEKLQMELKELALEEERLIQELEEVEKNRKMVAENFEKVRAEAERLDQEEAQYQKEYSEFKRQQLELDDELKSVDNQMRYAQIQLDKLRKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: join(1006417..1006543,1006937..1007004,1007228..1007286,1008031..1008121,1008402..1008538,1008725..1008919,1009207..1009353,1009884..1010033,1010118..1010178,1010669..1010811,1011352..1011520)
location: region:1006417-1011520:1
so has part: feature:1006417-1006543:1:exon
so has part: feature:1006937-1007004:1:exon
so has part: feature:1007228-1007286:1:exon
so has part: feature:1008031-1008121:1:exon
so has part: feature:1008402-1008538:1:exon
so has part: feature:1008725-1008919:1:exon
so has part: feature:1009207-1009353:1:exon
so has part: feature:1009884-1010033:1:exon
so has part: feature:1010118-1010178:1:exon
so has part: feature:1010669-1010811:1:exon
so has part: feature:1011352-1011520:1:exon

XP_044855749.1
type: Protein
SIO_000068: ncbiprotein

position:1006417:1
position: 1006417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011520:1
position: 1011520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006417-1006543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006937-1007004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007228-1007286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008031-1008121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1008402-1008538:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008725-1008919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009207-1009353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009884-1010033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1010118-1010178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010669-1010811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1011352-1011520:1:exon

CNTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1009347..1019894)
location: region:1009347-1019894:-1
so has part: feature:1009347-1019894:-1:exon
subclass of: SO_0000010

123356507
type: Gene
SIO_000068: ncbigene

position:1009347:-1
position: 1009347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019894:-1
position: 1019894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009347-1019894:-1:exon

CNTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTD1
product: cyclin N-terminal domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999817.1
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1009347..1009523,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018957,1019648..1019894))
location: region:1009347-1019894:-1
so has part: feature:1019648-1019894:-1:exon
so has part: feature:1018776-1018957:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1009347-1009523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019648-1019894:-1:exon

position:1019648:-1
position: 1019648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018776-1018957:-1:exon

position:1018776:-1
position: 1018776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018957:-1
position: 1018957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1017688-1017763:-1:exon

position:1017688:-1
position: 1017688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017763:-1
position: 1017763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1016531-1016705:-1:exon

position:1016531:-1
position: 1016531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016705:-1
position: 1016705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1015448-1015610:-1:exon

position:1015448:-1
position: 1015448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015610:-1
position: 1015610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014613-1014757:-1:exon

position:1014613:-1
position: 1014613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014757:-1
position: 1014757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1009347-1009523:-1:exon

position:1009523:-1
position: 1009523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin N-terminal domain-containing protein 1 isoform X3
translation: MASCDWLRGGISAEMSSEAQAVSRFHTPEPVFGVVAPEIIEDTLICLATENEQYLNELSDQAGCFKETQIVEFVFLLCEKWFLDQSARYQAVEIFERFMIKHVEESYNSIKKSRTNNEQGEGNIWGTLKAQMCDTFVLRLVSCIQLASKLSFHYNIINNNTVLKFLQSLDYSYTKQNLVESELAILKALCFQINVPTPFAYIELLLEVLGHNGCLLPMKQLHKMCTHLLDLTYLMRNIIYDTLLRISIENSTPSELQICHHEEI
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1009502..1009523,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018957,1019648..1019679))
location: region:1009502-1019679:-1
so has part: feature:1019648-1019679:-1:exon
so has part: feature:1018776-1018957:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1009502-1009523:-1:exon

XP_044855752.1
type: Protein
SIO_000068: ncbiprotein

position:1009502:-1
position: 1009502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019679:-1
position: 1019679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019648-1019679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018776-1018957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017688-1017763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016531-1016705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015448-1015610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014613-1014757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009502-1009523:-1:exon

CNTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTD1
product: cyclin N-terminal domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999815.1
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1012243..1012924,1013572..1013668,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018957,1019648..1019893))
location: region:1012243-1019893:-1
so has part: feature:1019648-1019893:-1:exon
so has part: feature:1018776-1018957:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1013572-1013668:-1:exon
so has part: feature:1012243-1012924:-1:exon

position:1012243:-1
position: 1012243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019893:-1
position: 1019893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019648-1019893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018776-1018957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017688-1017763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016531-1016705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015448-1015610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014613-1014757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013572-1013668:-1:exon

position:1013572:-1
position: 1013572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013668:-1
position: 1013668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1012243-1012924:-1:exon

position:1012924:-1
position: 1012924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTD1
product: cyclin N-terminal domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999816.1
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1012243..1012924,1013572..1013668,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018967,1019648..1019891))
location: region:1012243-1019891:-1
so has part: feature:1019648-1019891:-1:exon
so has part: feature:1018776-1018967:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1013572-1013668:-1:exon
so has part: feature:1012243-1012924:-1:exon

position:1019891:-1
position: 1019891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019648-1019891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018776-1018967:-1:exon

position:1018967:-1
position: 1018967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1017688-1017763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016531-1016705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015448-1015610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014613-1014757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013572-1013668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1012243-1012924:-1:exon

CNTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin N-terminal domain-containing protein 1 isoform X1
translation: MASCDWLRGGISAEMSSEAQAVSRFHTPEPVFGVVAPEIIEDTLICLATENEQYLNELSDQAGCFKETQIVEFVFLLCEKWFLDQSARYQAVEIFERFMIKHVEESYNSIKKSRTNNEQGEGNIWGTLKAQMCDTFVLRLVSCIQLASKLSFHYNIINNNTVLKFLQSLDYSYTKQNLVESELAILKALCFQINVPTPFAYIELLLEVLGHNGCLLPMKQLHKMCTHLLDLTYLMRNIIYDTLLRISIENSTPSELQIAKFLSVKEDFMLLAVGVISTSAFILNPEYWNQVVEHLNCITGITTQSILEFSYAILKHSVGTTNPRKNKGTRSSENYVVPPTK
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1012769..1012924,1013572..1013668,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018957,1019648..1019679))
location: region:1012769-1019679:-1
so has part: feature:1019648-1019679:-1:exon
so has part: feature:1018776-1018957:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1013572-1013668:-1:exon
so has part: feature:1012769-1012924:-1:exon

XP_044855750.1
type: Protein
SIO_000068: ncbiprotein

position:1012769:-1
position: 1012769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019648-1019679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018776-1018957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017688-1017763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016531-1016705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015448-1015610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014613-1014757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013572-1013668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1012769-1012924:-1:exon

CNTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin N-terminal domain-containing protein 1 isoform X2
translation: MSSEAQAVSRFHTPEPVFGVVAPEIIEDTLICLATENEQYLNELSDQAGCFKETQIVEFVFLLCEKWFLDQSARYQAVEIFERFMIKHVEESYNSIKKSRTNNEQGEGNIWGTLKAQMCDTFVLRLVSCIQLASKLSFHYNIINNNTVLKFLQSLDYSYTKQNLVESELAILKALCFQINVPTPFAYIELLLEVLGHNGCLLPMKQLHKMCTHLLDLTYLMRNIIYDTLLRISIENSTPSELQIAKFLSVKEDFMLLAVGVISTSAFILNPEYWNQVVEHLNCITGITTQSILEFSYAILKHSVGTTNPRKNKGTRSSENYVVPPTK
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(1012769..1012924,1013572..1013668,1014613..1014757,1015448..1015610,1016531..1016705,1017688..1017763,1018776..1018947))
location: region:1012769-1018947:-1
so has part: feature:1018776-1018947:-1:exon
so has part: feature:1017688-1017763:-1:exon
so has part: feature:1016531-1016705:-1:exon
so has part: feature:1015448-1015610:-1:exon
so has part: feature:1014613-1014757:-1:exon
so has part: feature:1013572-1013668:-1:exon
so has part: feature:1012769-1012924:-1:exon

XP_044855751.1
type: Protein
SIO_000068: ncbiprotein

position:1018947:-1
position: 1018947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018776-1018947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017688-1017763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016531-1016705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015448-1015610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014613-1014757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013572-1013668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012769-1012924:-1:exon

LOC123356509
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1019984..1021437
location: region:1019984-1021437:1
so has part: feature:1019984-1021437:1:exon
subclass of: SO_0000010

123356509
type: Gene
SIO_000068: ncbigene

position:1019984:1
position: 1019984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021437:1
position: 1021437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019984-1021437:1:exon

LOC123356509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356509
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999819.1
SIO_010081: LOC123356509
subclass of: SO_0000673
so part of: LOC123356509
location: join(1019984..1020272,1021061..1021437)
location: region:1019984-1021437:1
so has part: feature:1019984-1020272:1:exon
so has part: feature:1021061-1021437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019984-1020272:1:exon

position:1020272:1
position: 1020272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1021061-1021437:1:exon

position:1021061:1
position: 1021061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123356509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
translation: MTTASALRPLSHVSGGCGSAGKMAAPREPGRESEAAFAKRVDPAREPELSAEQRRVMQRAEEALRQRGLQRRLRGRNLLTGLGIGAVVLGIYGFTFYKISQERFLDELEQEVEAARAQAAKTPVN
SIO_010081: LOC123356509
subclass of: SO_0000673
so part of: LOC123356509
location: join(1019999..1020272,1021061..1021164)
location: region:1019999-1021164:1
so has part: feature:1019999-1020272:1:exon
so has part: feature:1021061-1021164:1:exon

XP_044855754.1
type: Protein
SIO_000068: ncbiprotein

position:1019999:1
position: 1019999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021164:1
position: 1021164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019999-1020272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1021061-1021164:1:exon

WNK4
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1021793..1054588)
location: region:1021793-1054588:-1
so has part: feature:1021793-1054588:-1:exon
subclass of: SO_0000010

123356504
type: Gene
SIO_000068: ncbigene

position:1021793:-1
position: 1021793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054588:-1
position: 1054588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021793-1054588:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999810.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1021793..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1050857..1050949,1054454..1054588))
location: region:1021793-1054588:-1
so has part: feature:1054454-1054588:-1:exon
so has part: feature:1050857-1050949:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1021793-1024068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054454-1054588:-1:exon

position:1054454:-1
position: 1054454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050857-1050949:-1:exon

position:1050857:-1
position: 1050857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050949:-1
position: 1050949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1036476-1036648:-1:exon

position:1036476:-1
position: 1036476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036648:-1
position: 1036648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1033377-1033597:-1:exon

position:1033377:-1
position: 1033377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033597:-1
position: 1033597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1032965-1033122:-1:exon

position:1032965:-1
position: 1032965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033122:-1
position: 1033122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1031359-1031447:-1:exon

position:1031359:-1
position: 1031359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_044999811.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
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location: region:1021793-1051329:-1
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WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044999808.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1021793..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1049324..1049965))
location: region:1021793-1049965:-1
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urn:…
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SIO_000628: feature:1021793-1024068:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044999809.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1021793..1024068,1024311..1024408,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1049324..1049963))
location: region:1021793-1049963:-1
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position:1049963:-1
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urn:…
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position:1024408:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1021793-1024068:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999813.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
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location: region:1021793-1043325:-1
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position:1043325:-1
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urn:…
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WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999812.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
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location: region:1021793-1037087:-1
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so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1021793-1024068:-1:exon

position:1037087:-1
position: 1037087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036897-1037087:-1:exon

position:1036897:-1
position: 1036897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1021793-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X3
translation: MKENQQHHPHGTDRETEAQRSSDLPKTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1050857..1050934))
location: region:1024066-1050934:-1
so has part: feature:1050857-1050934:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855745.1
type: Protein
SIO_000068: ncbiprotein

position:1024066:-1
position: 1024066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050934:-1
position: 1050934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050857-1050934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1024066-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X3
translation: MKENQQHHPHGTDRETEAQRSSDLPKTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1050857..1050934))
location: region:1024066-1050934:-1
so has part: feature:1050857-1050934:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1050857-1050934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1024066-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X2
translation: MLMLHVAGPPAAGAMSQTEVDLSGCGIALEPGTPGRAAPLRSRGRESRRGSYRFNRRSSAELERLGYEGPPGSGPAGAQEARGDPRALQGAEPAARSGSGSESGGQTPSPPPPGRVSPRGAPPDESRRAQEENEEIETRAVATSPDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024408,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1049324..1049869))
location: region:1024066-1049869:-1
so has part: feature:1049324-1049869:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024408:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855744.1
type: Protein
SIO_000068: ncbiprotein

position:1049869:-1
position: 1049869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049324-1049869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024408:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1024066-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X1
translation: MLMLHVAGPPAAGAMSQTEVDLSGCGIALEPGTPGRAAPLRSRGRESRRGSYRFNRRSSAELERLGYEGPPGSGPAGAQEARGDPRALQGAEPAARSGSGSESGGQTPSPPPPGRVSPRGAPPDESRRAQEENEEIETRAVATSPDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1049324..1049869))
location: region:1024066-1049869:-1
so has part: feature:1049324-1049869:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1049324-1049869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1024066-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X4
translation: MGLLSVRGTGSLAWPCCRTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036648,1036897..1036950))
location: region:1024066-1036950:-1
so has part: feature:1036897-1036950:-1:exon
so has part: feature:1036476-1036648:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855747.1
type: Protein
SIO_000068: ncbiprotein

position:1036950:-1
position: 1036950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036897-1036950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036476-1036648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1024066-1024068:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X5
translation: MLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKMKRAQDELQHQEQEKQPGILPLLEELKCPPVPTTPQASPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTTSDCETDGYLSSSGFVDSPDLSHCHSGTFSTGDPSSPPAAQSESCFPVSIAVSSPMERLPSAPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIHRIQDIIQRVETLLRKDGHGASRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELAPVQHSLSGSPSENDLFSLADTPPGTQPAGLQPLLPAEPPGSPSAAAWSWPSSLTVPGLAPYQLPTSQCFPQTARSGPQAGGSLLSTTPPRGDLGPLSPPMNSTAPAAPPWSPATSPLFSLAEMFSLAMMSMAQRLLPSVSLAAAPPGGPLAPAPIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSGTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGSVSPCSPKPSSHLIVSESPAPGTAKARLSPINEEAKPQILGRFQVTTSKDPANSTPGQQSQSDSEQSGQEPWEGAAGGSSQPSVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQEGPGEGGAESPQQAMVSQVWMSYARSSSYLSSDDTESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGIMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRT
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(1024066..1024068,1024311..1024411,1025102..1025304,1025531..1025966,1026139..1026235,1026700..1027277,1027496..1027651,1027980..1028037,1028365..1028538,1028618..1028734,1029208..1029349,1029563..1029636,1029738..1029877,1030210..1030540,1030889..1031108,1031359..1031447,1032965..1033122,1033377..1033597,1036476..1036597))
location: region:1024066-1036597:-1
so has part: feature:1036476-1036597:-1:exon
so has part: feature:1033377-1033597:-1:exon
so has part: feature:1032965-1033122:-1:exon
so has part: feature:1031359-1031447:-1:exon
so has part: feature:1030889-1031108:-1:exon
so has part: feature:1030210-1030540:-1:exon
so has part: feature:1029738-1029877:-1:exon
so has part: feature:1029563-1029636:-1:exon
so has part: feature:1029208-1029349:-1:exon
so has part: feature:1028618-1028734:-1:exon
so has part: feature:1028365-1028538:-1:exon
so has part: feature:1027980-1028037:-1:exon
so has part: feature:1027496-1027651:-1:exon
so has part: feature:1026700-1027277:-1:exon
so has part: feature:1026139-1026235:-1:exon
so has part: feature:1025531-1025966:-1:exon
so has part: feature:1025102-1025304:-1:exon
so has part: feature:1024311-1024411:-1:exon
so has part: feature:1024066-1024068:-1:exon

XP_044855748.1
type: Protein
SIO_000068: ncbiprotein

position:1036597:-1
position: 1036597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036476-1036597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1033377-1033597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032965-1033122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031359-1031447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030889-1031108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030210-1030540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029738-1029877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029563-1029636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029208-1029349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028618-1028734:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028365-1028538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1027980-1028037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027496-1027651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026700-1027277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026139-1026235:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1025531-1025966:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1025102-1025304:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1024311-1024411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1024066-1024068:-1:exon

VPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1062581..1073106)
location: region:1062581-1073106:-1
so has part: feature:1062581-1073106:-1:exon
subclass of: SO_0000010

123356508
type: Gene
SIO_000068: ncbigene

position:1062581:-1
position: 1062581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073106:-1
position: 1073106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062581-1073106:-1:exon

VPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: VPS25
product: vacuolar protein sorting 25 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999818.1
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: complement(join(1062581..1063274,1063849..1063924,1064601..1064689,1065129..1065182,1069546..1069691,1072928..1073106))
location: region:1062581-1073106:-1
so has part: feature:1072928-1073106:-1:exon
so has part: feature:1069546-1069691:-1:exon
so has part: feature:1065129-1065182:-1:exon
so has part: feature:1064601-1064689:-1:exon
so has part: feature:1063849-1063924:-1:exon
so has part: feature:1062581-1063274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072928-1073106:-1:exon

position:1072928:-1
position: 1072928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069546-1069691:-1:exon

position:1069546:-1
position: 1069546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069691:-1
position: 1069691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1065129-1065182:-1:exon

position:1065129:-1
position: 1065129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065182:-1
position: 1065182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1064601-1064689:-1:exon

position:1064601:-1
position: 1064601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064689:-1
position: 1064689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1063849-1063924:-1:exon

position:1063849:-1
position: 1063849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063924:-1
position: 1063924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1062581-1063274:-1:exon

position:1063274:-1
position: 1063274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein-sorting-associated protein 25
translation: MKRTGSQCRGPEVAERWFRVRWAAAMSFEWPWQYRFPPFFTLQPNVDTRQKQMTAWCSLVLSYCRINKQYTMTVMEAQESPLFNNRKLQRKLPMESIQVVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQWVSKNGLTNSVFTLYELSNGDETENEEFHGLEESMLLRALQALQQEHRAEIITLDDGRGVKFFQ
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: complement(join(1063159..1063274,1063849..1063924,1064601..1064689,1065129..1065182,1069546..1069691,1072928..1073049))
location: region:1063159-1073049:-1
so has part: feature:1072928-1073049:-1:exon
so has part: feature:1069546-1069691:-1:exon
so has part: feature:1065129-1065182:-1:exon
so has part: feature:1064601-1064689:-1:exon
so has part: feature:1063849-1063924:-1:exon
so has part: feature:1063159-1063274:-1:exon

XP_044855753.1
type: Protein
SIO_000068: ncbiprotein

position:1063159:-1
position: 1063159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073049:-1
position: 1073049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072928-1073049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069546-1069691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065129-1065182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064601-1064689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1063849-1063924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063159-1063274:-1:exon

RAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1075496..1084789)
location: region:1075496-1084789:-1
so has part: feature:1075496-1084789:-1:exon
subclass of: SO_0000010

123356593
type: Gene
SIO_000068: ncbigene

position:1075496:-1
position: 1075496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084789:-1
position: 1084789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075496-1084789:-1:exon

RAMP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 74926
gene: RAMP2
product: receptor activity modifying protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006575393.1
SIO_010081: RAMP2
so part of: RAMP2
location: complement(join(1075496..1076708,1076772..1077119,1078890..1078992,1080772..1080897,1084491..1084789))
location: region:1075496-1084789:-1
so has part: feature:1084491-1084789:-1:exon
so has part: feature:1080772-1080897:-1:exon
so has part: feature:1078890-1078992:-1:exon
so has part: feature:1076772-1077119:-1:exon
so has part: feature:1075496-1076708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1084491-1084789:-1:exon

position:1084491:-1
position: 1084491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080772-1080897:-1:exon

position:1080772:-1
position: 1080772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080897:-1
position: 1080897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078890-1078992:-1:exon

position:1078890:-1
position: 1078890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078992:-1
position: 1078992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1076772-1077119:-1:exon

position:1076772:-1
position: 1076772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077119:-1
position: 1077119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1075496-1076708:-1:exon

position:1076708:-1
position: 1076708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: RAMP2
product: receptor activity modifying protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_044999963.1
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1075649..1077119,1078890..1078992,1080772..1080897,1084491..1084789))
location: region:1075649-1084789:-1
so has part: feature:1084491-1084789:-1:exon
so has part: feature:1080772-1080897:-1:exon
so has part: feature:1078890-1078992:-1:exon
so has part: feature:1075649-1077119:-1:exon

position:1075649:-1
position: 1075649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084491-1084789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080772-1080897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078890-1078992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075649-1077119:-1:exon

RAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: RAMP2
product: receptor activity modifying protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_044999964.1
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1075650..1077119,1078890..1078992,1080772..1080894,1084491..1084789))
location: region:1075650-1084789:-1
so has part: feature:1084491-1084789:-1:exon
so has part: feature:1080772-1080894:-1:exon
so has part: feature:1078890-1078992:-1:exon
so has part: feature:1075650-1077119:-1:exon

position:1075650:-1
position: 1075650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084491-1084789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080772-1080894:-1:exon

position:1080894:-1
position: 1080894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078890-1078992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075650-1077119:-1:exon

RAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 2 isoform X2
translation: MALCRQTGSGRLCPGLLLLLLLWALGSELRPAGTATPPGANESLAELQNQMVIEPENLLLSLTADEKYNLRAYMCWANFSLWMMNVTRVQLCEWRVISRPYSNLRHCLETFAEEQNYSYPNSIAEECIVHSHRTYFLNCTQEHPTFLDPPEDVLLALIFAPICLIPFLVTLVVWRSKDGKMQS
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1076864..1077119,1078890..1078992,1080772..1080894,1084491..1084560))
location: region:1076864-1084560:-1
so has part: feature:1084491-1084560:-1:exon
so has part: feature:1080772-1080894:-1:exon
so has part: feature:1078890-1078992:-1:exon
so has part: feature:1076864-1077119:-1:exon

XP_044855899.1
type: Protein
SIO_000068: ncbiprotein

position:1076864:-1
position: 1076864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084560:-1
position: 1084560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084491-1084560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080772-1080894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078890-1078992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076864-1077119:-1:exon

RAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 2 isoform X1
translation: MALCRQTGSGRLCPGLLLLLLLWAALGSELRPAGTATPPGANESLAELQNQMVIEPENLLLSLTADEKYNLRAYMCWANFSLWMMNVTRVQLCEWRVISRPYSNLRHCLETFAEEQNYSYPNSIAEECIVHSHRTYFLNCTQEHPTFLDPPEDVLLALIFAPICLIPFLVTLVVWRSKDGKMQS
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1076864..1077119,1078890..1078992,1080772..1080897,1084491..1084560))
location: region:1076864-1084560:-1
so has part: feature:1084491-1084560:-1:exon
so has part: feature:1080772-1080897:-1:exon
so has part: feature:1078890-1078992:-1:exon
so has part: feature:1076864-1077119:-1:exon

XP_044855898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1084491-1084560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080772-1080897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078890-1078992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076864-1077119:-1:exon

LOC123356481
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: LOC123356481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1087689..1092554)
location: region:1087689-1092554:-1
so has part: feature:1087689-1092554:-1:exon
subclass of: SO_0000010

123356481
type: Gene
SIO_000068: ncbigene

position:1087689:-1
position: 1087689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092554:-1
position: 1092554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087689-1092554:-1:exon

LOC123356481
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: LOC123356481
product: receptor activity-modifying protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_044999766.1
SIO_010081: LOC123356481
subclass of: SO_0000673
so part of: LOC123356481
location: complement(join(1087689..1088095,1089311..1089452,1090165..1090191,1090608..1090646,1092419..1092554))
location: region:1087689-1092554:-1
so has part: feature:1092419-1092554:-1:exon
so has part: feature:1090608-1090646:-1:exon
so has part: feature:1090165-1090191:-1:exon
so has part: feature:1089311-1089452:-1:exon
so has part: feature:1087689-1088095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092419-1092554:-1:exon

position:1092419:-1
position: 1092419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1090608-1090646:-1:exon

position:1090608:-1
position: 1090608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090646:-1
position: 1090646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1090165-1090191:-1:exon

position:1090165:-1
position: 1090165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090191:-1
position: 1090191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1089311-1089452:-1:exon

position:1089311:-1
position: 1089311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089452:-1
position: 1089452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1087689-1088095:-1:exon

position:1088095:-1
position: 1088095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123356481
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: LOC123356481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 1-like
translation: MPVQPRHHLCYWLLIPLLQWGRGELTYGDLEDESHYLYLEEDGLFAEEGGSAHCRDTYLEWISLYCWTTFHATVMATPEWSRCQWEQIGRTYSDLSNCTVLMAEALSCPWPSPALDSFFLQIHMEYFTNCTMPASSQPSQPPLGPVLAMAAVPACLTPLLVALTLRKAREAELKPDRPLPAAPSVLSRQRASSHAVLGTNWKGRESV
SIO_010081: LOC123356481
subclass of: SO_0000673
so part of: LOC123356481
location: complement(join(1087741..1088095,1089311..1089452,1090165..1090191,1090608..1090646,1092419..1092479))
location: region:1087741-1092479:-1
so has part: feature:1092419-1092479:-1:exon
so has part: feature:1090608-1090646:-1:exon
so has part: feature:1090165-1090191:-1:exon
so has part: feature:1089311-1089452:-1:exon
so has part: feature:1087741-1088095:-1:exon

XP_044855701.1
type: Protein
SIO_000068: ncbiprotein

position:1087741:-1
position: 1087741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092479:-1
position: 1092479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092419-1092479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090608-1090646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090165-1090191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1089311-1089452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087741-1088095:-1:exon

EZH1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1099249..1122931
location: region:1099249-1122931:1
so has part: feature:1099249-1122931:1:exon
subclass of: SO_0000010

123356388
type: Gene
SIO_000068: ncbigene

position:1099249:1
position: 1099249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122931:1
position: 1122931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099249-1122931:1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_044999623.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1099249..1099319,1102321..1102441,1103029..1103157,1103483..1103602,1106432..1106552,1107260..1107433,1108187..1108289,1109456..1109619,1110544..1110635,1111325..1111505,1112089..1112285,1113570..1113661,1114200..1114240,1114744..1114869,1116701..1116879,1117491..1117586,1118347..1118428,1119385..1119465,1119773..1119857,1120509..1122931)
location: region:1099249-1122931:1
so has part: feature:1099249-1099319:1:exon
so has part: feature:1102321-1102441:1:exon
so has part: feature:1103029-1103157:1:exon
so has part: feature:1103483-1103602:1:exon
so has part: feature:1106432-1106552:1:exon
so has part: feature:1107260-1107433:1:exon
so has part: feature:1108187-1108289:1:exon
so has part: feature:1109456-1109619:1:exon
so has part: feature:1110544-1110635:1:exon
so has part: feature:1111325-1111505:1:exon
so has part: feature:1112089-1112285:1:exon
so has part: feature:1113570-1113661:1:exon
so has part: feature:1114200-1114240:1:exon
so has part: feature:1114744-1114869:1:exon
so has part: feature:1116701-1116879:1:exon
so has part: feature:1117491-1117586:1:exon
so has part: feature:1118347-1118428:1:exon
so has part: feature:1119385-1119465:1:exon
so has part: feature:1119773-1119857:1:exon
so has part: feature:1120509-1122931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099249-1099319:1:exon

position:1099319:1
position: 1099319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102321-1102441:1:exon

position:1102321:1
position: 1102321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102441:1
position: 1102441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103029-1103157:1:exon

position:1103029:1
position: 1103029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103157:1
position: 1103157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103483-1103602:1:exon

position:1103483:1
position: 1103483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103602:1
position: 1103602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106432-1106552:1:exon

position:1106432:1
position: 1106432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106552:1
position: 1106552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1107260-1107433:1:exon

position:1107260:1
position: 1107260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107433:1
position: 1107433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1108187-1108289:1:exon

position:1108187:1
position: 1108187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108289:1
position: 1108289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1109456-1109619:1:exon

position:1109456:1
position: 1109456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109619:1
position: 1109619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1110544-1110635:1:exon

position:1110544:1
position: 1110544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110635:1
position: 1110635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1111325-1111505:1:exon

position:1111325:1
position: 1111325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111505:1
position: 1111505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1112089-1112285:1:exon

position:1112089:1
position: 1112089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112285:1
position: 1112285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1113570-1113661:1:exon

position:1113570:1
position: 1113570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113661:1
position: 1113661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1114200-1114240:1:exon

position:1114200:1
position: 1114200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114240:1
position: 1114240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1114744-1114869:1:exon

position:1114744:1
position: 1114744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114869:1
position: 1114869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1116701-1116879:1:exon

position:1116701:1
position: 1116701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116879:1
position: 1116879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1117491-1117586:1:exon

position:1117491:1
position: 1117491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117586:1
position: 1117586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1118347-1118428:1:exon

position:1118347:1
position: 1118347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118428:1
position: 1118428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1119385-1119465:1:exon

position:1119385:1
position: 1119385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119465:1
position: 1119465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1119773-1119857:1:exon

position:1119773:1
position: 1119773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119857:1
position: 1119857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1120509-1122931:1:exon

position:1120509:1
position: 1120509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X2
translation: MDEAKMEIPTPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVQEKTQILNEDWKKLRVQPVALMKPGTGHPFLKQCTVESNFPGFPNQTIFMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMITGSVLISDAVFLELVDALNQYSDEEEEGLNDSEGKQEDGKEELPVTRKRKRTTMEGNKKCPKKQFPNDMIFSAISSMFPENGFPEDMKERYRELTEQSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNREIKIEPDPCGTDCFLWLEGAKEFAVLHNPRSKCSGRRRRRHHVVSASSSNPSSSSVAETREGDSDRDTGNDWASSSSEANSRSQTPTKQKGSPASSQLFVMEAPQEPVEWTGAEESLFRVLHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLIMKLPTSELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPDHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1099309..1099319,1102321..1102441,1103029..1103157,1103483..1103602,1106432..1106552,1107260..1107433,1108187..1108289,1109456..1109619,1110544..1110635,1111325..1111505,1112089..1112285,1113570..1113661,1114200..1114240,1114744..1114869,1116701..1116879,1117491..1117586,1118347..1118428,1119385..1119465,1119773..1119857,1120509..1120569)
location: region:1099309-1120569:1
so has part: feature:1099309-1099319:1:exon
so has part: feature:1102321-1102441:1:exon
so has part: feature:1103029-1103157:1:exon
so has part: feature:1103483-1103602:1:exon
so has part: feature:1106432-1106552:1:exon
so has part: feature:1107260-1107433:1:exon
so has part: feature:1108187-1108289:1:exon
so has part: feature:1109456-1109619:1:exon
so has part: feature:1110544-1110635:1:exon
so has part: feature:1111325-1111505:1:exon
so has part: feature:1112089-1112285:1:exon
so has part: feature:1113570-1113661:1:exon
so has part: feature:1114200-1114240:1:exon
so has part: feature:1114744-1114869:1:exon
so has part: feature:1116701-1116879:1:exon
so has part: feature:1117491-1117586:1:exon
so has part: feature:1118347-1118428:1:exon
so has part: feature:1119385-1119465:1:exon
so has part: feature:1119773-1119857:1:exon
so has part: feature:1120509-1120569:1:exon

XP_044855558.1
type: Protein
SIO_000068: ncbiprotein

position:1099309:1
position: 1099309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120569:1
position: 1120569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099309-1099319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102321-1102441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103029-1103157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103483-1103602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106432-1106552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107260-1107433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108187-1108289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1109456-1109619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1110544-1110635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111325-1111505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112089-1112285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113570-1113661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1114200-1114240:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1114744-1114869:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1116701-1116879:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1117491-1117586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1118347-1118428:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1119385-1119465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1119773-1119857:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120509-1120569:1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999622.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1100783..1102076,1102321..1102441,1103029..1103157,1103483..1103602,1106432..1106552,1107260..1107433,1108187..1108289,1109456..1109619,1110544..1110635,1111325..1111505,1112089..1112285,1113570..1113661,1114200..1114240,1114744..1114869,1116701..1116879,1117491..1117586,1118347..1118428,1119385..1119465,1119773..1119857,1120509..1122931)
location: region:1100783-1122931:1
so has part: feature:1100783-1102076:1:exon
so has part: feature:1102321-1102441:1:exon
so has part: feature:1103029-1103157:1:exon
so has part: feature:1103483-1103602:1:exon
so has part: feature:1106432-1106552:1:exon
so has part: feature:1107260-1107433:1:exon
so has part: feature:1108187-1108289:1:exon
so has part: feature:1109456-1109619:1:exon
so has part: feature:1110544-1110635:1:exon
so has part: feature:1111325-1111505:1:exon
so has part: feature:1112089-1112285:1:exon
so has part: feature:1113570-1113661:1:exon
so has part: feature:1114200-1114240:1:exon
so has part: feature:1114744-1114869:1:exon
so has part: feature:1116701-1116879:1:exon
so has part: feature:1117491-1117586:1:exon
so has part: feature:1118347-1118428:1:exon
so has part: feature:1119385-1119465:1:exon
so has part: feature:1119773-1119857:1:exon
so has part: feature:1120509-1122931:1:exon

position:1100783:1
position: 1100783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100783-1102076:1:exon

position:1102076:1
position: 1102076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102321-1102441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103029-1103157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103483-1103602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106432-1106552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107260-1107433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108187-1108289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1109456-1109619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1110544-1110635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111325-1111505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112089-1112285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113570-1113661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1114200-1114240:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1114744-1114869:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1116701-1116879:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1117491-1117586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1118347-1118428:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1119385-1119465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1119773-1119857:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120509-1122931:1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X1
translation: MKPASPLPSVCYCPGQMEQRSCSEYLVKKEVTQDHAVGTSHPRGTDRKMEIPTPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVQEKTQILNEDWKKLRVQPVALMKPGTGHPFLKQCTVESNFPGFPNQTIFMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMITGSVLISDAVFLELVDALNQYSDEEEEGLNDSEGKQEDGKEELPVTRKRKRTTMEGNKKCPKKQFPNDMIFSAISSMFPENGFPEDMKERYRELTEQSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNREIKIEPDPCGTDCFLWLEGAKEFAVLHNPRSKCSGRRRRRHHVVSASSSNPSSSSVAETREGDSDRDTGNDWASSSSEANSRSQTPTKQKGSPASSQLFVMEAPQEPVEWTGAEESLFRVLHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLIMKLPTSELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPDHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1101937..1102076,1102321..1102441,1103029..1103157,1103483..1103602,1106432..1106552,1107260..1107433,1108187..1108289,1109456..1109619,1110544..1110635,1111325..1111505,1112089..1112285,1113570..1113661,1114200..1114240,1114744..1114869,1116701..1116879,1117491..1117586,1118347..1118428,1119385..1119465,1119773..1119857,1120509..1120569)
location: region:1101937-1120569:1
so has part: feature:1101937-1102076:1:exon
so has part: feature:1102321-1102441:1:exon
so has part: feature:1103029-1103157:1:exon
so has part: feature:1103483-1103602:1:exon
so has part: feature:1106432-1106552:1:exon
so has part: feature:1107260-1107433:1:exon
so has part: feature:1108187-1108289:1:exon
so has part: feature:1109456-1109619:1:exon
so has part: feature:1110544-1110635:1:exon
so has part: feature:1111325-1111505:1:exon
so has part: feature:1112089-1112285:1:exon
so has part: feature:1113570-1113661:1:exon
so has part: feature:1114200-1114240:1:exon
so has part: feature:1114744-1114869:1:exon
so has part: feature:1116701-1116879:1:exon
so has part: feature:1117491-1117586:1:exon
so has part: feature:1118347-1118428:1:exon
so has part: feature:1119385-1119465:1:exon
so has part: feature:1119773-1119857:1:exon
so has part: feature:1120509-1120569:1:exon

XP_044855557.1
type: Protein
SIO_000068: ncbiprotein

position:1101937:1
position: 1101937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101937-1102076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102321-1102441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103029-1103157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103483-1103602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106432-1106552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107260-1107433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108187-1108289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1109456-1109619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1110544-1110635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111325-1111505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112089-1112285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113570-1113661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1114200-1114240:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1114744-1114869:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1116701-1116879:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1117491-1117586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1118347-1118428:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1119385-1119465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1119773-1119857:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120509-1120569:1:exon

CNTNAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1123560..1154425)
location: region:1123560-1154425:-1
so has part: feature:1123560-1154425:-1:exon
subclass of: SO_0000010

123356512
type: Gene
SIO_000068: ncbigene

position:1123560:-1
position: 1123560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154425:-1
position: 1154425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123560-1154425:-1:exon

CNTNAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTNAP1
product: contactin associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999825.1
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1123560..1124775,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1148101..1148248,1148850..1149043,1149383..1149484,1154265..1154425))
location: region:1123560-1154425:-1
so has part: feature:1154265-1154425:-1:exon
so has part: feature:1149383-1149484:-1:exon
so has part: feature:1148850-1149043:-1:exon
so has part: feature:1148101-1148248:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1123560-1124775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154265-1154425:-1:exon

position:1154265:-1
position: 1154265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149383-1149484:-1:exon

position:1149383:-1
position: 1149383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149484:-1
position: 1149484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148850-1149043:-1:exon

position:1148850:-1
position: 1148850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149043:-1
position: 1149043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1148101-1148248:-1:exon

position:1148101:-1
position: 1148101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148248:-1
position: 1148248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1145843-1146046:-1:exon

position:1145843:-1
position: 1145843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146046:-1
position: 1146046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144276-1144460:-1:exon

position:1144276:-1
position: 1144276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144460:-1
position: 1144460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1143668-1143811:-1:exon

position:1143668:-1
position: 1143668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143811:-1
position: 1143811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1137631-1137892:-1:exon

position:1137631:-1
position: 1137631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137892:-1
position: 1137892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1136980-1137129:-1:exon

position:1136980:-1
position: 1136980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137129:-1
position: 1137129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1136724-1136895:-1:exon

position:1136724:-1
position: 1136724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136895:-1
position: 1136895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1136020-1136126:-1:exon

position:1136020:-1
position: 1136020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136126:-1
position: 1136126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1135799-1135918:-1:exon

position:1135799:-1
position: 1135799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135918:-1
position: 1135918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1134920-1135123:-1:exon

position:1134920:-1
position: 1134920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135123:-1
position: 1135123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1134493-1134649:-1:exon

position:1134493:-1
position: 1134493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134649:-1
position: 1134649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1132150-1132277:-1:exon

position:1132150:-1
position: 1132150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132277:-1
position: 1132277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1131844-1132011:-1:exon

position:1131844:-1
position: 1131844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132011:-1
position: 1132011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1130505-1130723:-1:exon

position:1130505:-1
position: 1130505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130723:-1
position: 1130723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1128761-1129000:-1:exon

position:1128761:-1
position: 1128761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129000:-1
position: 1129000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1127648-1127875:-1:exon

position:1127648:-1
position: 1127648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127875:-1
position: 1127875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1127286-1127413:-1:exon

position:1127286:-1
position: 1127286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127413:-1
position: 1127413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1126884-1126977:-1:exon

position:1126884:-1
position: 1126884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126977:-1
position: 1126977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1126168-1126398:-1:exon

position:1126168:-1
position: 1126168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126398:-1
position: 1126398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1125093-1125140:-1:exon

position:1125093:-1
position: 1125093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125140:-1
position: 1125140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1123560-1124775:-1:exon

position:1124775:-1
position: 1124775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTNAP1
product: contactin associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999824.1
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1123560..1124778,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1148101..1148248,1148850..1149043,1149383..1149484,1154265..1154425))
location: region:1123560-1154425:-1
so has part: feature:1154265-1154425:-1:exon
so has part: feature:1149383-1149484:-1:exon
so has part: feature:1148850-1149043:-1:exon
so has part: feature:1148101-1148248:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1123560-1124778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154265-1154425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149383-1149484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148850-1149043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148101-1148248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145843-1146046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144276-1144460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1143668-1143811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137631-1137892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136980-1137129:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136724-1136895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136020-1136126:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135799-1135918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134920-1135123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1134493-1134649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132150-1132277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1131844-1132011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130505-1130723:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1128761-1129000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1127648-1127875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1127286-1127413:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1126884-1126977:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1126168-1126398:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1125093-1125140:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1123560-1124778:-1:exon

position:1124778:-1
position: 1124778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CNTNAP1
product: contactin associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_044999826.1
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1123560..1124778,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1146486..1148078))
location: region:1123560-1148078:-1
so has part: feature:1146486-1148078:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1123560-1124778:-1:exon

position:1148078:-1
position: 1148078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146486-1148078:-1:exon

position:1146486:-1
position: 1146486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145843-1146046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144276-1144460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143668-1143811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1137631-1137892:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136980-1137129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136724-1136895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136020-1136126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135799-1135918:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1134920-1135123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1134493-1134649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1132150-1132277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131844-1132011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130505-1130723:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1128761-1129000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1127648-1127875:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127286-1127413:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1126884-1126977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1126168-1126398:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1125093-1125140:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1123560-1124778:-1:exon

CNTNAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein 1 isoform X2
translation: MLRALPAASGMDTRLLCLLLAACAAVLPLDLRRCPPQHCYDELVAPLYSSSIGASSRYSIFYSSSFARLHSSSGWSPDPSDKEPWLQIDLMQKHKINAVATQGTYNTYDWVTRYIVLYGDHPSSWKPFFQLGSNWTFFGNVNESGVVRHDLHYPILARYIRIIPRAWNPRGKIGLRLGLYGCPYWSDVLYFDGDDAISYRFRGKTVRTSQDVFAFSFKTMEREGLLMHGEGSQGDYITVELKQAQLVLHISLGSSPLHSSQGHTTVTVGSLLDDQHWHSLRIDRHGHHVNLSLDGEVKRFRCNGDFQQLDLDTELFFGGVISQKNRSLVYRQNFRGCMENIFFNRVNIADLARRRASNIRFEGHVSHYCQDQPYTPITFAGINNYLQVPGIPRRNRLSVSFKFRSWDAVGLLLYTSFAEHLGSLEMVLSNGQVNVSIAQPGRKKLEFAAGYRLNDGFWHMVELVARDGSAVITIDDNDGAEFRVAHPFQLRTGTQYFFGGCPKPAAVTGCLSNQTAFHGCLQSISVDAQPVELDLLRQERLGKYSNVFFNMCSITDRCTPNLCEHGGRCLQSWDDFTCVCDLTGYKGETCHKSLYKESCDAYWLSGKTSGNFTIDPDGSGPLKPFTVYCDIREDRAWTVVRHNRHYATRVRGSSVDRPFLGAVEYWNASWAEVAALANGSESCEQHLEFSCYSSRLLNTPYGPPVSFWMGRHNQRHYYWGGSPPGVQRCACGLDKNCVDPKYFCNCDADHAQWRTDKGLLNFVDHLPVTQVVVGDTNRSHSEAQFLLGPLRCYGDRNTWNTVSFNRGASLVFPTFLANHSLDISFYFRTTALSGVFLENWGCRNYIRIELNTTRDVVFAYDIGNGDENLTVRSPVPFSDDEWHQVKAEINVKLARLRVDKLPWVVRLAPPQSYVRLEFDRPLYVGSAEHRLRPFLGCLRGLRMNGQTLNLEGQANETEGVRVNCTGYCQHPRVPCQNSGLCVERYSHYTCNCSLSAFDGPFCNRDIGAYFEPGTWVRYNILPAELSAARAFASILSQPLPGYNLTSEELSFSFRTGTAPAVLLYVSSFRRDYVAVLIREDGSLQLRYQLGTSPYVFPLTTAPVTDGRPHRINITRVNRTLYTQVDYFPVMEQQFSLFVDRKLDSPKNLYLGRVMETGMIDPEIQKYNTPGFSGCLSGVKFNSILPLKAIFRPSGGPAPYSIKGELVESSCASMPRSIMDIPPDMDPWYLGTEFPHVHDDGWIGIITGFVTFLLLLLAGLLLLLYLHHHRYKGSYLTNEPKAVQDYHGPAKPLVPHKDQNLPQILEEAKGE
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1124585..1124775,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1148101..1148248,1148850..1149043,1149383..1149484,1154265..1154373))
location: region:1124585-1154373:-1
so has part: feature:1154265-1154373:-1:exon
so has part: feature:1149383-1149484:-1:exon
so has part: feature:1148850-1149043:-1:exon
so has part: feature:1148101-1148248:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1124585-1124775:-1:exon

XP_044855760.1
type: Protein
SIO_000068: ncbiprotein

position:1124585:-1
position: 1124585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154373:-1
position: 1154373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154265-1154373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149383-1149484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148850-1149043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148101-1148248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145843-1146046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144276-1144460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1143668-1143811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137631-1137892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136980-1137129:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136724-1136895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136020-1136126:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135799-1135918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134920-1135123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1134493-1134649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132150-1132277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1131844-1132011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130505-1130723:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1128761-1129000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1127648-1127875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1127286-1127413:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1126884-1126977:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1126168-1126398:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1125093-1125140:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1124585-1124775:-1:exon

CNTNAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein 1 isoform X1
translation: MLRALPAASGMDTRLLCLLLAACAAVLPLDLRRCPPQHCYDELVAPLYSSSIGASSRYSIFYSSSFARLHSSSGWSPDPSDKEPWLQIDLMQKHKINAVATQGTYNTYDWVTRYIVLYGDHPSSWKPFFQLGSNWTFFGNVNESGVVRHDLHYPILARYIRIIPRAWNPRGKIGLRLGLYGCPYWSDVLYFDGDDAISYRFRGKTVRTSQDVFAFSFKTMEREGLLMHGEGSQGDYITVELKQAQLVLHISLGSSPLHSSQGHTTVTVGSLLDDQHWHSLRIDRHGHHVNLSLDGEVKRFRCNGDFQQLDLDTELFFGGVISQKNRSLVYRQNFRGCMENIFFNRVNIADLARRRASNIRFEGHVSHYCQDQPYTPITFAGINNYLQVPGIPRRNRLSVSFKFRSWDAVGLLLYTSFAEHLGSLEMVLSNGQVNVSIAQPGRKKLEFAAGYRLNDGFWHMVELVARDGSAVITIDDNDGAEFRVAHPFQLRTGTQYFFGGCPKPAAVTGCLSNQTAFHGCLQSISVDAQPVELDLLRQERLGKYSNVFFNMCSITDRCTPNLCEHGGRCLQSWDDFTCVCDLTGYKGETCHKSLYKESCDAYWLSGKTSGNFTIDPDGSGPLKPFTVYCDIREDRAWTVVRHNRHYATRVRGSSVDRPFLGAVEYWNASWAEVAALANGSESCEQHLEFSCYSSRLLNTPYGPPVSFWMGRHNQRHYYWGGSPPGVQRCACGLDKNCVDPKYFCNCDADHAQWRTDKGLLNFVDHLPVTQVVVGDTNRSHSEAQFLLGPLRCYGDRNTWNTVSFNRGASLVFPTFLANHSLDISFYFRTTALSGVFLENWGCRNYIRIELNTTRDVVFAYDIGNGDENLTVRSPVPFSDDEWHQVKAEINVKLARLRVDKLPWVVRLAPPQSYVRLEFDRPLYVGSAEHRLRPFLGCLRGLRMNGQTLNLEGQANETEGVRVNCTGYCQHPRVPCQNSGLCVERYSHYTCNCSLSAFDGPFCNRDIGAYFEPGTWVRYNILPAELSAARAFASILSQPLPGYNLTSEELSFSFRTGTAPAVLLYVSSFRRDYVAVLIREDGSLQLRYQLGTSPYVFPLTTAPVTDGRPHRINITRVNRTLYTQVDYFPVMEQQFSLFVDRKLDSPKNLYLGRVMETGMIDPEIQKYNTPGFSGCLSGVKFNSILPLKAIFRPSGGPAPYSIKGELVESSCASMPRSIMDIPPDMDPWYLGTEFPHVHDDGWIGIITGLVVTFLLLLLAGLLLLLYLHHHRYKGSYLTNEPKAVQDYHGPAKPLVPHKDQNLPQILEEAKGE
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1124585..1124778,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1148101..1148248,1148850..1149043,1149383..1149484,1154265..1154373))
location: region:1124585-1154373:-1
so has part: feature:1154265-1154373:-1:exon
so has part: feature:1149383-1149484:-1:exon
so has part: feature:1148850-1149043:-1:exon
so has part: feature:1148101-1148248:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1124585-1124778:-1:exon

XP_044855759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154265-1154373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149383-1149484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148850-1149043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148101-1148248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145843-1146046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144276-1144460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1143668-1143811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137631-1137892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136980-1137129:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136724-1136895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136020-1136126:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135799-1135918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134920-1135123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1134493-1134649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132150-1132277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1131844-1132011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130505-1130723:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1128761-1129000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1127648-1127875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1127286-1127413:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1126884-1126977:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1126168-1126398:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1125093-1125140:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1124585-1124778:-1:exon

CNTNAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein 1 isoform X3
translation: MFANIKHPLDNWEVSSYLGRTFQSMRDSPSPGCGLWLAGSDVLYFDGDDAISYRFRGKTVRTSQDVFAFSFKTMEREGLLMHGEGSQGDYITVELKQAQLVLHISLGSSPLHSSQGHTTVTVGSLLDDQHWHSLRIDRHGHHVNLSLDGEVKRFRCNGDFQQLDLDTELFFGGVISQKNRSLVYRQNFRGCMENIFFNRVNIADLARRRASNIRFEGHVSHYCQDQPYTPITFAGINNYLQVPGIPRRNRLSVSFKFRSWDAVGLLLYTSFAEHLGSLEMVLSNGQVNVSIAQPGRKKLEFAAGYRLNDGFWHMVELVARDGSAVITIDDNDGAEFRVAHPFQLRTGTQYFFGGCPKPAAVTGCLSNQTAFHGCLQSISVDAQPVELDLLRQERLGKYSNVFFNMCSITDRCTPNLCEHGGRCLQSWDDFTCVCDLTGYKGETCHKSLYKESCDAYWLSGKTSGNFTIDPDGSGPLKPFTVYCDIREDRAWTVVRHNRHYATRVRGSSVDRPFLGAVEYWNASWAEVAALANGSESCEQHLEFSCYSSRLLNTPYGPPVSFWMGRHNQRHYYWGGSPPGVQRCACGLDKNCVDPKYFCNCDADHAQWRTDKGLLNFVDHLPVTQVVVGDTNRSHSEAQFLLGPLRCYGDRNTWNTVSFNRGASLVFPTFLANHSLDISFYFRTTALSGVFLENWGCRNYIRIELNTTRDVVFAYDIGNGDENLTVRSPVPFSDDEWHQVKAEINVKLARLRVDKLPWVVRLAPPQSYVRLEFDRPLYVGSAEHRLRPFLGCLRGLRMNGQTLNLEGQANETEGVRVNCTGYCQHPRVPCQNSGLCVERYSHYTCNCSLSAFDGPFCNRDIGAYFEPGTWVRYNILPAELSAARAFASILSQPLPGYNLTSEELSFSFRTGTAPAVLLYVSSFRRDYVAVLIREDGSLQLRYQLGTSPYVFPLTTAPVTDGRPHRINITRVNRTLYTQVDYFPVMEQQFSLFVDRKLDSPKNLYLGRVMETGMIDPEIQKYNTPGFSGCLSGVKFNSILPLKAIFRPSGGPAPYSIKGELVESSCASMPRSIMDIPPDMDPWYLGTEFPHVHDDGWIGIITGLVVTFLLLLLAGLLLLLYLHHHRYKGSYLTNEPKAVQDYHGPAKPLVPHKDQNLPQILEEAKGE
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1124585..1124778,1125093..1125140,1126168..1126398,1126884..1126977,1127286..1127413,1127648..1127875,1128761..1129000,1130505..1130723,1131844..1132011,1132150..1132277,1134493..1134649,1134920..1135123,1135799..1135918,1136020..1136126,1136724..1136895,1136980..1137129,1137631..1137892,1143668..1143811,1144276..1144460,1145843..1146046,1146486..1146600))
location: region:1124585-1146600:-1
so has part: feature:1146486-1146600:-1:exon
so has part: feature:1145843-1146046:-1:exon
so has part: feature:1144276-1144460:-1:exon
so has part: feature:1143668-1143811:-1:exon
so has part: feature:1137631-1137892:-1:exon
so has part: feature:1136980-1137129:-1:exon
so has part: feature:1136724-1136895:-1:exon
so has part: feature:1136020-1136126:-1:exon
so has part: feature:1135799-1135918:-1:exon
so has part: feature:1134920-1135123:-1:exon
so has part: feature:1134493-1134649:-1:exon
so has part: feature:1132150-1132277:-1:exon
so has part: feature:1131844-1132011:-1:exon
so has part: feature:1130505-1130723:-1:exon
so has part: feature:1128761-1129000:-1:exon
so has part: feature:1127648-1127875:-1:exon
so has part: feature:1127286-1127413:-1:exon
so has part: feature:1126884-1126977:-1:exon
so has part: feature:1126168-1126398:-1:exon
so has part: feature:1125093-1125140:-1:exon
so has part: feature:1124585-1124778:-1:exon

XP_044855761.1
type: Protein
SIO_000068: ncbiprotein

position:1146600:-1
position: 1146600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146486-1146600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145843-1146046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144276-1144460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143668-1143811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1137631-1137892:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136980-1137129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136724-1136895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136020-1136126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135799-1135918:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1134920-1135123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1134493-1134649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1132150-1132277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131844-1132011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130505-1130723:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1128761-1129000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1127648-1127875:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127286-1127413:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1126884-1126977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1126168-1126398:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1125093-1125140:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1124585-1124778:-1:exon

CCR10
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1163810..1168805
location: region:1163810-1168805:1
so has part: feature:1163810-1168805:1:exon
subclass of: SO_0000010

123356564
type: Gene
SIO_000068: ncbigene

position:1163810:1
position: 1163810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168805:1
position: 1168805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163810-1168805:1:exon

CCR10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: CCR10
product: C-C motif chemokine receptor 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999931.1
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: join(1163810..1164479,1167732..1168805)
location: region:1163810-1168805:1
so has part: feature:1163810-1164479:1:exon
so has part: feature:1167732-1168805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163810-1164479:1:exon

position:1164479:1
position: 1164479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167732-1168805:1:exon

position:1167732:1
position: 1167732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCR10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 10
translation: MTEMPPPNQTFSPWAAEPPVTTDYYYEDGEYSEGGSPLPEVCEKGTVQSFVRTYQPAVYLLLSALGVAGNGLVLLTHARYRQAHSMTDVCLLHLAVADLLLLLTLPFAVAGALQGWLLGSDACRTLQGFYALNFYSGFLFLTCISVDRYMAIVRAPAACRLRPRARCYGWLAAGLAWLLSTLLALPQFVYSRAEDHQDLRLCRVLFPAGVSKAAQGATNLAQVILGFVLPFLVMASCYAAVARTLRAARSFQRHKALRVILALVLVFVALQLPYSLVVLLDTADVLGRREMSCAQSRRKDLALVVTSGLAFARCCLNPVLYAFVGVRFRKELRLLASDAGCVGRAQDGQHPSPRRRAPLSTWLDTV
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: join(1164453..1164479,1167732..1168805)
location: region:1164453-1168805:1
so has part: feature:1164453-1164479:1:exon
so has part: feature:1167732-1168805:1:exon

XP_044855866.1
type: Protein
SIO_000068: ncbiprotein

position:1164453:1
position: 1164453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164453-1164479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167732-1168805:1:exon

PLEKHH3
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177502..1197351
location: region:1177502-1197351:1
so has part: feature:1177502-1197351:1:exon
subclass of: SO_0000010

123356547
type: Gene
SIO_000068: ncbigene

position:1177502:1
position: 1177502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197351:1
position: 1197351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177502-1197351:1:exon

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044999902.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1177502..1177793,1185434..1185489,1187505..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192193,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1197351)
location: region:1177502-1197351:1
so has part: feature:1177502-1177793:1:exon
so has part: feature:1185434-1185489:1:exon
so has part: feature:1187505-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192193:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1197351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177502-1177793:1:exon

position:1177793:1
position: 1177793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185434-1185489:1:exon

position:1185434:1
position: 1185434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185489:1
position: 1185489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1187505-1187593:1:exon

position:1187505:1
position: 1187505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187593:1
position: 1187593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1188253-1188447:1:exon

position:1188253:1
position: 1188253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188447:1
position: 1188447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188843-1189000:1:exon

position:1188843:1
position: 1188843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189000:1
position: 1189000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1189287-1189410:1:exon

position:1189287:1
position: 1189287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189410:1
position: 1189410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1190510-1190807:1:exon

position:1190510:1
position: 1190510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190807:1
position: 1190807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1191467-1191674:1:exon

position:1191467:1
position: 1191467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191674:1
position: 1191674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1192066-1192193:1:exon

position:1192066:1
position: 1192066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192193:1
position: 1192193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1193755-1193875:1:exon

position:1193755:1
position: 1193755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193875:1
position: 1193875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1194240-1194689:1:exon

position:1194240:1
position: 1194240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194689:1
position: 1194689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1195140-1195331:1:exon

position:1195140:1
position: 1195140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195331:1
position: 1195331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195789-1197351:1:exon

position:1195789:1
position: 1195789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044999901.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1177502..1177793,1185434..1185489,1187505..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192202,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1197349)
location: region:1177502-1197349:1
so has part: feature:1177502-1177793:1:exon
so has part: feature:1185434-1185489:1:exon
so has part: feature:1187505-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192202:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1197349:1:exon

position:1197349:1
position: 1197349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177502-1177793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185434-1185489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187505-1187593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1188253-1188447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188843-1189000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189287-1189410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190510-1190807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191467-1191674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192066-1192202:1:exon

position:1192202:1
position: 1192202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1193755-1193875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194240-1194689:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195140-1195331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195789-1197349:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X1
translation: MPFPGGLWWLVCCRQGFTLLRRDYGEPDKEPDGEAEEESSFELRSKGAQGPLQLSLTQPVCTSSGSERSLPVSEEMRSLITEKGPGPVEEEPDAIVKGWLQREARGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGSPEILEQIYRCNPVLRYTSSPLYAPLLPFPYGSSDQRAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGVLQTCLDLQPLVDEIYCQLVKQTTEPPVPGGVGNLRYWQLLTCMSCTFLPSPPVLRYLCFHLGRTESEFPGSEMAEYGRFIAAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRHHERPVGRATLVADVLTRFENLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQSLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPWCPGARLRAGLLAGALPWGHSLAKQQAEQDQKLQGRLREEGASVMAAIVDRWKLLQGMGRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFGVSDSSTFHLSVGDRDLLFECPRVDEIAQLLHTYLTSLGTRQTPLREELADTCHPGDALDSGLPPPQQRLCPASAPWGGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1177647..1177793,1185434..1185489,1187505..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192202,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1195986)
location: region:1177647-1195986:1
so has part: feature:1177647-1177793:1:exon
so has part: feature:1185434-1185489:1:exon
so has part: feature:1187505-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192202:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1195986:1:exon

XP_044855836.1
type: Protein
SIO_000068: ncbiprotein

position:1177647:1
position: 1177647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195986:1
position: 1195986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177647-1177793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185434-1185489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187505-1187593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1188253-1188447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188843-1189000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189287-1189410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190510-1190807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191467-1191674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192066-1192202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193755-1193875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194240-1194689:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195140-1195331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195789-1195986:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X2
translation: MPFPGGLWWLVCCRQGFTLLRRDYGEPDKEPDGEAEEESSFELRSKGAQGPLQLSLTQPVCTSSGSERSLPVSEEMRSLITEKGPGPVEEEPDAIVKGWLQREARGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGSPEILEQIYRCNPVLRYTSSPLYAPLLPFPYGSSDQRAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGVLQTCLDLQPLVDEIYCQLVKQTTEPPVPGGVGNLRYWQLLTCMSCTFLPSPPVLRYLCFHLGRTESEFPGSEMAEYGRFIAAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRHHERPVGRATLVADVLTSLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQSLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPWCPGARLRAGLLAGALPWGHSLAKQQAEQDQKLQGRLREEGASVMAAIVDRWKLLQGMGRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFGVSDSSTFHLSVGDRDLLFECPRVDEIAQLLHTYLTSLGTRQTPLREELADTCHPGDALDSGLPPPQQRLCPASAPWGGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1177647..1177793,1185434..1185489,1187505..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192193,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1195986)
location: region:1177647-1195986:1
so has part: feature:1177647-1177793:1:exon
so has part: feature:1185434-1185489:1:exon
so has part: feature:1187505-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192193:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1195986:1:exon

XP_044855837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177647-1177793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185434-1185489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187505-1187593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1188253-1188447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188843-1189000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189287-1189410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190510-1190807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191467-1191674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192066-1192193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193755-1193875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194240-1194689:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195140-1195331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195789-1195986:1:exon

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044999903.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1184196..1184217,1185434..1185489,1187505..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192202,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1197346)
location: region:1184196-1197346:1
so has part: feature:1184196-1184217:1:exon
so has part: feature:1185434-1185489:1:exon
so has part: feature:1187505-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192202:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1197346:1:exon

position:1184196:1
position: 1184196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197346:1
position: 1197346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184196-1184217:1:exon

position:1184217:1
position: 1184217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185434-1185489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187505-1187593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1188253-1188447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188843-1189000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189287-1189410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190510-1190807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191467-1191674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192066-1192202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193755-1193875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194240-1194689:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195140-1195331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195789-1197346:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 74926
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X3
translation: MRSLITEKGPGPVEEEPDAIVKGWLQREARGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGSPEILEQIYRCNPVLRYTSSPLYAPLLPFPYGSSDQRAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGVLQTCLDLQPLVDEIYCQLVKQTTEPPVPGGVGNLRYWQLLTCMSCTFLPSPPVLRYLCFHLGRTESEFPGSEMAEYGRFIAAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRHHERPVGRATLVADVLTRFENLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQSLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPWCPGARLRAGLLAGALPWGHSLAKQQAEQDQKLQGRLREEGASVMAAIVDRWKLLQGMGRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFGVSDSSTFHLSVGDRDLLFECPRVDEIAQLLHTYLTSLGTRQTPLREELADTCHPGDALDSGLPPPQQRLCPASAPWGGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1187527..1187593,1188253..1188447,1188843..1189000,1189287..1189410,1190510..1190807,1191467..1191674,1192066..1192202,1193755..1193875,1194240..1194689,1195140..1195331,1195789..1195986)
location: region:1187527-1195986:1
so has part: feature:1187527-1187593:1:exon
so has part: feature:1188253-1188447:1:exon
so has part: feature:1188843-1189000:1:exon
so has part: feature:1189287-1189410:1:exon
so has part: feature:1190510-1190807:1:exon
so has part: feature:1191467-1191674:1:exon
so has part: feature:1192066-1192202:1:exon
so has part: feature:1193755-1193875:1:exon
so has part: feature:1194240-1194689:1:exon
so has part: feature:1195140-1195331:1:exon
so has part: feature:1195789-1195986:1:exon

XP_044855838.1
type: Protein
SIO_000068: ncbiprotein

position:1187527:1
position: 1187527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187527-1187593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1188253-1188447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188843-1189000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189287-1189410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190510-1190807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191467-1191674:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1192066-1192202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193755-1193875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1194240-1194689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195140-1195331:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1195789-1195986:1:exon

TUBG1
type: Gene
subclass of: SO_0000704
RO_0002162: 74926
gene: TUBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1199388..1209583)
location: region:1199388-1209583:-1
so has part: feature:1199388-1209583:-1:exon
subclass of: SO_0000010

123356549
type: Gene
SIO_000068: ncbigene

position:1199388:-1
position: 1199388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209583:-1
position: 1209583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199388-1209583:-1:exon

TUBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 74926
gene: TUBG1
product: tubulin gamma 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044999908.1
SIO_010081: TUBG1
subclass of: SO_0000673
so part of: TUBG1
location: complement(join(1199388..1200135,1201025..1201186,1201637..1201789,1203694..1203843,1204367..1204453,1205286..1205412,1205970..1206049,1207448..1207516,1207799..1207966,1208865..1208977,1209432..1209583))
location: region:1199388-1209583:-1
so has part: feature:1209432-1209583:-1:exon
so has part: feature:1208865-1208977:-1:exon
so has part: feature:1207799-1207966:-1:exon
so has part: feature:1207448-1207516:-1:exon
so has part: feature:1205970-1206049:-1:exon
so has part: feature:1205286-1205412:-1:exon
so has part: feature:1204367-1204453:-1:exon
so has part: feature:1203694-1203843:-1:exon
so has part: feature:1201637-1201789:-1:exon
so has part: feature:1201025-1201186:-1:exon
so has part: feature:1199388-1200135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209432-1209583:-1:exon

position:1209432:-1
position: 1209432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208865-1208977:-1:exon

position:1208865:-1
position: 1208865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208977:-1
position: 1208977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1207799-1207966:-1:exon

position:1207799:-1
position: 1207799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207966:-1
position: 1207966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207448-1207516:-1:exon

position:1207448:-1
position: 1207448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207516:-1
position: 1207516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1205970-1206049:-1:exon

position:1205970:-1
position: 1205970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206049:-1
position: 1206049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1205286-1205412:-1:exon

position:1205286:-1
position: 1205286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205412:-1
position: 1205412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1204367-1204453:-1:exon

position:1204367:-1
position: 1204367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204453:-1
position: 1204453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203694-1203843:-1:exon

position:1203694:-1
position: 1203694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203843:-1
position: 1203843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1201637-1201789:-1:exon