Glaesserella parasuis strain YHP1818 plasmid unnamed, complete sequence.
type: Entry
definition: Glaesserella parasuis strain YHP1818 plasmid unnamed, complete sequence.
sequence version: NZ_CP071488.1
sequence date: 2022-12-19
sequence: sequence
division: CON
label: NZ_CP071488.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18175053
keyword: RefSeq
source: Glaesserella parasuis (Haemophilus parasuis)
organism: Glaesserella parasuis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Glaesserella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP071488.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.13.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 128.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/19/2022 15:08:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,344\nCDSs (total) :: 2,260\nGenes (coding) :: 2,133\nCDSs (with protein) :: 2,133\nGenes (RNA) :: 84\nrRNAs :: 8, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 6, 6 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 4\nPseudo Genes (total) :: 127\nCDSs (without protein) :: 127\nPseudo Genes (ambiguous residues) :: 0 of 127\nPseudo Genes (frameshifted) :: 64 of 127\nPseudo Genes (incomplete) :: 80 of 127\nPseudo Genes (internal stop) :: 17 of 127\nPseudo Genes (multiple problems) :: 30 of 127\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 24230
topology: circular
so has quality: SO_0000988
location: 1..24230
location: region:1-24230:1
RO_0002162: 738

NZ_CP071488
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18175053
type: BioSample
SIO_000068: biosample

1
title: Molecular Characterization of a novel Integrative Conjugative Element in Glaesserella parasuis
author: Hu, G.
author: Sun, H.
journal: Unpublished

2
title: Direct Submission
author: Hu, G.
author: Sun, H.
journal: Submitted (06-MAR-2021) College of Animal Science and Veterinary Medicine, Henan Agricultural University, PinganRoad, Zhengzhou 450046, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24230:1
position: 24230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24230:1:source
so part of: sequence
organism: Glaesserella parasuis
mol type: genomic DNA
strain: YHP1818
isolation source: pig
host: swine
plasmid: unnamed
country: China: Henan
lat lon: 34.76 N 113.65 E
collection date: 2018-10-16
collected by: lung

738
type: Taxonomy
SIO_000068: taxonomy

J1G47_RS11545
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11545
old locus tag: J1G47_11545
so part of: sequence
location: 95..916
location: region:95-916:1
so has part: feature:95-916:1:exon
subclass of: SO_0000010

66619928
type: Gene
SIO_000068: ncbigene

position:95:1
position: 95
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916:1
position: 916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95-916:1:exon

J1G47_RS11545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11545
old locus tag: J1G47_11545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012262961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MVTHTVIISDRSKDNITVYTKEPAFLVIADRTDLKALKYLEEANKARIYILLGENQRYVGQVSNKIYERLAAHHLDENKSWWNQIIFFGREDGHLDKSQTDYLEKRLIEEFKKMELQLDNNTVGNRSYIEKTSKIKADNIWNLAQEIMDEVAHINIFETTITDEENSTGQYFIELEGHKISGKSYRDNQKQFFLFLLKNSRYRKLVEEFCLNGKPSGNHCIGNEPSFRPNGMKYTTELTKNIYLYHNLSMKDLRKSIQNFADAVGLKIIFHWD
SIO_010081: J1G47_RS11545
subclass of: SO_0000673
so part of: J1G47_RS11545
location: 95..916
location: region:95-916:1
so has part: feature:95-916:1:exon

WP_207326870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95-916:1:exon

J1G47_RS11550
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11550
old locus tag: J1G47_11550
so part of: sequence
location: 1064..2086
location: region:1064-2086:1
so has part: feature:1064-2086:1:exon
subclass of: SO_0000010

66619929
type: Gene
SIO_000068: ncbigene

position:1064:1
position: 1064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2086:1
position: 2086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064-2086:1:exon

J1G47_RS11550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11550
old locus tag: J1G47_11550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005821902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDDEXK nuclease domain-containing protein
translation: MNNISTQNYQSLITDIGTLLNRGREQVAQTANTILVQTYWLIGRHIVEFEQNGQDKAEYGSDLLNRLSKDLTKIHGKGFSRTNIALFRQFYLKFQIVQTVSEQFAIPVFTLSWSHYVEIIKEDNPLAIGFYTKQTEKENWSVRELKRQMKSMLFHRLALSKDKEGVLALAERGQEIARPQDILRDPVVLEFLNIPQAHQMQENELEEQLISNLQHFLLELGKGFAFIGRQYRISLGGKHFYVDLVFYHRILKCFVLIDLKRGEVNHQDIGQMNMYLNYFRKEENVDGDNEPIGIVLGAYKDKLLVEYALDNIDNQLFVSKYQLYLPNREELERELERYLD
SIO_010081: J1G47_RS11550
subclass of: SO_0000673
so part of: J1G47_RS11550
location: 1064..2086
location: region:1064-2086:1
so has part: feature:1064-2086:1:exon

WP_005821902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1064-2086:1:exon

J1G47_RS11555
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11555
old locus tag: J1G47_11555
so part of: sequence
location: complement(2192..2362)
location: region:2192-2362:-1
so has part: feature:2192-2362:-1:exon
subclass of: SO_0000010

66619930
type: Gene
SIO_000068: ncbigene

position:2192:-1
position: 2192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2362:-1
position: 2362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2192-2362:-1:exon

J1G47_RS11555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11555
old locus tag: J1G47_11555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MTILAPLIQRELHYHLLKSEMAGRLYQMVAVGGNVAKIAQAIAFLKANFRQTLTID
SIO_010081: J1G47_RS11555
subclass of: SO_0000673
so part of: J1G47_RS11555
location: complement(2192..2362)
location: region:2192-2362:-1
so has part: feature:2192-2362:-1:exon

WP_010787314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2192-2362:-1:exon

J1G47_RS11560
type: Gene
subclass of: SO_0000704
RO_0002162: 738
gene: thiE
locus tag: J1G47_RS11560
old locus tag: J1G47_11560
so part of: sequence
location: complement(2378..3040)
location: region:2378-3040:-1
so has part: feature:2378-3040:-1:exon
subclass of: SO_0000010

66619931
type: Gene
SIO_000068: ncbigene

position:2378:-1
position: 2378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040:-1
position: 3040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2378-3040:-1:exon

J1G47_RS11560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
gene: thiE
locus tag: J1G47_RS11560
old locus tag: J1G47_11560
EC number: 2.5.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010128074.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MFQRELLSVYFVAGTQDCLHLPTGSPEQKLLSTLETALQAGITCYQFREKGESALQDKQAQWQLARDCQALCRQYGVPFVLNNDVEMAVKLGADGVHIGQKDMAAIQAIQLTQGKLFLGISNSSLNDLQNSFRLPEIDYWAVGAIFNTQSKLDAMQNVGIDLIRQAKQLNPNQPLVAIGGISVDNVASIWAAGADGVAVISAITQADNVMQTVQKLKTTY
SIO_010081: J1G47_RS11560
subclass of: SO_0000673
so part of: J1G47_RS11560
location: complement(2378..3040)
location: region:2378-3040:-1
so has part: feature:2378-3040:-1:exon

WP_010787315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2378-3040:-1:exon

J1G47_RS11565
type: Gene
subclass of: SO_0000704
RO_0002162: 738
gene: thiD
locus tag: J1G47_RS11565
old locus tag: J1G47_11565
so part of: sequence
location: complement(3057..3857)
location: region:3057-3857:-1
so has part: feature:3057-3857:-1:exon
subclass of: SO_0000010

66619932
type: Gene
SIO_000068: ncbigene

position:3057:-1
position: 3057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857:-1
position: 3857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3057-3857:-1:exon

J1G47_RS11565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
gene: thiD
locus tag: J1G47_RS11565
old locus tag: J1G47_11565
EC number: 2.7.1.49
EC number: 2.7.4.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003822835.1
GO function: GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
translation: MTIPQVLTIAGSDSGGGAGIQADLKTFQMRGAFGTSVVTAVTAQNTLGVHHIHMISLDNIAAQIEAVATDFTISAYKIGMLGTADVIECVANSIKKHHLGTLVLDPVMIAKGGELLLQNHAIEALKRELLPLADIITPNLPEVTALTGVQVNNDIDAQYAAQLLRDMGVKTVVIKGGHLDNSNSAVCRDWVFSGNEMHILDTPRFATPHTHGTGCTFSACIAAELAKGIDTLSAIRIAKQAISAAISQPIGVGKGCGAVNHWAISA
SIO_010081: J1G47_RS11565
subclass of: SO_0000673
so part of: J1G47_RS11565
location: complement(3057..3857)
location: region:3057-3857:-1
so has part: feature:3057-3857:-1:exon

WP_010787316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3057-3857:-1:exon

J1G47_RS11570
type: Gene
subclass of: SO_0000704
RO_0002162: 738
gene: thiM
locus tag: J1G47_RS11570
old locus tag: J1G47_11570
so part of: sequence
location: complement(3868..4677)
location: region:3868-4677:-1
so has part: feature:3868-4677:-1:exon
subclass of: SO_0000010

66619933
type: Gene
SIO_000068: ncbigene

position:3868:-1
position: 3868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4677:-1
position: 4677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3868-4677:-1:exon

J1G47_RS11570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
gene: thiM
locus tag: J1G47_RS11570
old locus tag: J1G47_11570
EC number: 2.7.1.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010787317.1
GO function: GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyethylthiazole kinase
translation: MNPKIIFLDAVREHNPLIHNITNLVSAHFTANGLLALGASPMMAESPDEMAELATISSAVVLNLGTPSDEKVSAMLAAGMAANQAGVPVVLDPVAVGASHLRQKTVATLTQNIQFAAIRGNAGELAYLADVQWASKGVDAGQGSGNLAEIAQKVAQKFNTIAVLSGEHDFVANHDRVMKLSNGVALFPKVTATGCLLSAIVGAFLAVAPRELAFQAACEACTVYAIAGELAAVGLQATQSGTFAVRLLDALAAIDATQTEQLMKAEWII
SIO_010081: J1G47_RS11570
subclass of: SO_0000673
so part of: J1G47_RS11570
location: complement(3868..4677)
location: region:3868-4677:-1
so has part: feature:3868-4677:-1:exon

WP_010787317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3868-4677:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 738
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: complement(4846..4938)
location: region:4846-4938:-1
so has part: feature:4846-4938:-1:region

position:4846:-1
position: 4846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938:-1
position: 4938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4846-4938:-1:region

J1G47_RS11575
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11575
old locus tag: J1G47_11575
so part of: sequence
location: 5080..6177
location: region:5080-6177:1
so has part: feature:5080-6177:1:exon
subclass of: SO_0000010

66619934
type: Gene
SIO_000068: ncbigene

position:5080:1
position: 5080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6177:1
position: 6177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5080-6177:1:exon

J1G47_RS11575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11575
old locus tag: J1G47_11575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012621948.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MSVFRFFENLSDPRAYNQKHHFLDIVFLVVSAVISGANSWTEIKLFGELHLDWLRKYRPFECGIPVDDTIARVIKRIEPQAFNEVFLNFINEIRTQQGREVIAIDGKTLRHSFNPETQSALHSVTVWSQSRGLILSQKKSSGKQNEQQAVMEIIDSFCLKNAVITVDAMNTQKKIAEKIIEKKGDYVMPLKKNHRQFQSEVEVYFHKISRDCPEMLETYEEVNAERSRIDERYYRKLKVSDWLSKAEEWKGIKSVLEVCRKRSDNGKESQEKVFYISSLDVDIQILAKCVRGHWEVENKAHWVLDVVYKEDECAVTDEWGAENLAILRRLALNLARLHPKKQSMKGKLTAAGWSDEFRDELLLGV
SIO_010081: J1G47_RS11575
subclass of: SO_0000673
so part of: J1G47_RS11575
location: 5080..6177
location: region:5080-6177:1
so has part: feature:5080-6177:1:exon

WP_207326525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5080-6177:1:exon

J1G47_RS11580
type: Gene
subclass of: SO_0000704
RO_0002162: 738
gene: tldD
locus tag: J1G47_RS11580
old locus tag: J1G47_11580
so part of: sequence
location: complement(6364..7809)
location: region:6364-7809:-1
so has part: feature:6364-7809:-1:exon
subclass of: SO_0000010

66619935
type: Gene
SIO_000068: ncbigene

position:6364:-1
position: 6364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7809:-1
position: 7809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6364-7809:-1:exon

J1G47_RS11580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
gene: tldD
locus tag: J1G47_RS11580
old locus tag: J1G47_11580
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005618007.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloprotease TldD
translation: MLNQVSNSLLLPSGLQLSDLTKVLDHFSSRQIDYADLYFQFSQDESWSLEDSIIKEGGFYIDRGVGVRAVSGEKTGFAYADQISLSQLEQCAMAARSITQESGRLLVKPFKETTAIKRYASINPLDTLSREQKVELLHLVDKVARAEDPRVIQVNANLSAVYEEMLVSATDSTLAADIRPLVRLSISVLVEQNGKRERGSAGAGGRFGLEWFLAPHYTGDSRAVYLAKEAVRQAVVNLGAVAAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSMFTNRIGELVTSPLCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTEGNHEFDEMIESVDFGLYAPHFSGGQVDITSGKFVFSTSEAYLIEKGKITKPATGATLIGSGIEAMQQVSMVGKKMELDLGIGTCGKEGQSVPVGVGQPTVKLDKITVGGRG
SIO_010081: J1G47_RS11580
subclass of: SO_0000673
so part of: J1G47_RS11580
location: complement(6364..7809)
location: region:6364-7809:-1
so has part: feature:6364-7809:-1:exon

WP_207326760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6364-7809:-1:exon

J1G47_RS11585
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11585
old locus tag: J1G47_11585
so part of: sequence
location: 7940..8767
location: region:7940-8767:1
so has part: feature:7940-8767:1:exon
subclass of: SO_0000010

66619936
type: Gene
SIO_000068: ncbigene

position:7940:1
position: 7940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8767:1
position: 8767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7940-8767:1:exon

J1G47_RS11585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11585
old locus tag: J1G47_11585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005713289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase-fold protein
translation: MLDPLQYYFLEMREHYLNVPYLNQQRRIRVLLPKGYREEAGHYPVLYMHDGQNIFYSKESYSGHSWKVIPTIKNHKEFPKMIIVGIDNAGPDRLDEYGPWPTDTGSTPETQNAGGYGMAYGRWVVETVKPFIDQHYRTKRDRDHTLLAGSSMGGIITAYMGAEYPEVFGHLGVFSLASWFSEPAFMEFIHTHPLNCSSKVFIQVGTNEGDEVDSHFISNMNQAYIDCTLHYYQALIRTGHPLDNIRLKIMANEIHHEMHWADHFVEFLRFSLMNH
SIO_010081: J1G47_RS11585
subclass of: SO_0000673
so part of: J1G47_RS11585
location: 7940..8767
location: region:7940-8767:1
so has part: feature:7940-8767:1:exon

WP_207326759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7940-8767:1:exon

J1G47_RS11590
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11590
old locus tag: J1G47_11590
so part of: sequence
location: 8914..9153
location: region:8914-9153:1
so has part: feature:8914-9153:1:exon
subclass of: SO_0000010

66619937
type: Gene
SIO_000068: ncbigene

position:8914:1
position: 8914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9153:1
position: 9153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9153:1:exon

J1G47_RS11590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11590
old locus tag: J1G47_11590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005713287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MLITTPDMLGNSLRDIRKQKKLSQMQIANQVALRQATISTFEKKTDKATIETLFKLLSGLGYELHIQPRPEKTEGNDEW
SIO_010081: J1G47_RS11590
subclass of: SO_0000673
so part of: J1G47_RS11590
location: 8914..9153
location: region:8914-9153:1
so has part: feature:8914-9153:1:exon

WP_010786623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9153:1:exon

J1G47_RS11990
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11990
so part of: sequence
location: 9147..9638
location: region:9147-9638:1
so has part: feature:9147-9638:1:exon
subclass of: SO_0000010

70035361
type: Gene
SIO_000068: ncbigene

position:9147:1
position: 9147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9638:1
position: 9638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9147-9638:1:exon

J1G47_RS11990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11990
inference: COORDINATES: protein motif:HMM:TIGR03071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HipA N-terminal domain-containing protein
translation: MVMRLRVLMNGEMVGYFDRTLSGSHHFTYAESWLNSPLARPISLSMPLQRATYQGKEVINFFDNLLPDNPQIRARIATRFNAETQQPFDLLAKIGRDAAGAITLLGEDEQIPNHRIIQATELDESEMTKILQSYQYNAPLGMIDNNQDFRISISISVLATGSH
SIO_010081: J1G47_RS11990
subclass of: SO_0000673
so part of: J1G47_RS11990
location: 9147..9638
location: region:9147-9638:1
so has part: feature:9147-9638:1:exon

WP_234924170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9147-9638:1:exon

J1G47_RS11995
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11995
so part of: sequence
location: 9574..10026
location: region:9574-10026:1
so has part: feature:9574-10026:1:exon
subclass of: SO_0000010

70035362
type: Gene
SIO_000068: ncbigene

position:9574:1
position: 9574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10026:1
position: 10026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9574-10026:1:exon

J1G47_RS11995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11995
inference: COORDINATES: protein motif:HMM:NF019421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HipA domain-containing protein
translation: MIIIRTSEFLFQFLFWLLAAIDGHAKNFSLAIEKQGRYHLSPVYDVISAYPMLGGKGWHHSELQMAMSLRSTQKGKKWHWSKIYAEHFYATAKFVGFSSSDMKQVIEQICDTVQETIDSVATTLPKQIDENVRDQIFTGIMKQVQKVSMK
SIO_010081: J1G47_RS11995
subclass of: SO_0000673
so part of: J1G47_RS11995
location: 9574..10026
location: region:9574-10026:1
so has part: feature:9574-10026:1:exon

WP_234924169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9574-10026:1:exon

J1G47_RS11600
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11600
old locus tag: J1G47_11600
pseudo: true
so part of: sequence
location: complement(10030..11416)
location: region:10030-11416:-1
so has part: feature:10030-11416:-1:exon
subclass of: SO_0000010

66619939
type: Gene
SIO_000068: ncbigene

position:10030:-1
position: 10030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11416:-1
position: 11416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10030-11416:-1:exon

J1G47_RS11600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11600
old locus tag: J1G47_11600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016138480.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
SIO_010081: J1G47_RS11600
subclass of: SO_0000673
so part of: J1G47_RS11600
location: complement(10030..11416)
location: region:10030-11416:-1
so has part: feature:10030-11416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10030-11416:-1:exon

J1G47_RS11605
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11605
old locus tag: J1G47_11605
so part of: sequence
location: 11525..12139
location: region:11525-12139:1
so has part: feature:11525-12139:1:exon
subclass of: SO_0000010

66619940
type: Gene
SIO_000068: ncbigene

position:11525:1
position: 11525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12139:1
position: 12139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11525-12139:1:exon

J1G47_RS11605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11605
old locus tag: J1G47_11605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005821003.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbA family protein
translation: MKIYYLFDPLCGWCYGASATLQKLNEIYPLTLTPTGLFYQCGRKMDADFARYAWSNDQRIEKLTDQPFSQAYLENVLQGQGEFNSANSLLALTAVQQIAPEKELTVLVALQKARYVDGLDNADLTVVEQVLHKLNLSQSVPLLSEQSTKVALEQRLQFGQQLAKNCGVQGVPQLIVEKDERLHIVPSQLLYGDVQSLDSYLKGL
SIO_010081: J1G47_RS11605
subclass of: SO_0000673
so part of: J1G47_RS11605
location: 11525..12139
location: region:11525-12139:1
so has part: feature:11525-12139:1:exon

WP_010787298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11525-12139:1:exon

J1G47_RS11610
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11610
old locus tag: J1G47_11610
so part of: sequence
location: complement(12200..13072)
location: region:12200-13072:-1
so has part: feature:12200-13072:-1:exon
subclass of: SO_0000010

66619941
type: Gene
SIO_000068: ncbigene

position:12200:-1
position: 12200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13072:-1
position: 13072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12200-13072:-1:exon

J1G47_RS11610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11610
old locus tag: J1G47_11610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015939933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MNLNALSLFVSVVQDGSLSKASERLNVPIATISRQITELEKSLNIQLFDRKKSGVKPTMAGQKLYEQVYQNIDNLLQVEKAFSEHQEISGTLRISTFTGLEEVWAWLDEFGAKYPKVSIHCQVTDRVLDLVEDNIDFTFRTGDLHTDNAVARLVLTAKVKCVAHPHLLAQYGTPTTPDDLARFPCVGFAKAEQKELIISLENKVLKLPYVFASNDVYAIAYFIQQGRGVGYLSENIANRLIEEYGLVEVLRDYPMQTYPVHLLYLKHRYPSSVMRAFLDFVVEKVGIVAG
SIO_010081: J1G47_RS11610
subclass of: SO_0000673
so part of: J1G47_RS11610
location: complement(12200..13072)
location: region:12200-13072:-1
so has part: feature:12200-13072:-1:exon

WP_207326866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12200-13072:-1:exon

J1G47_RS11615
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11615
old locus tag: J1G47_11615
so part of: sequence
location: complement(13075..15990)
location: region:13075-15990:-1
so has part: feature:13075-15990:-1:exon
subclass of: SO_0000010

66619942
type: Gene
SIO_000068: ncbigene

position:13075:-1
position: 13075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15990:-1
position: 15990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13075-15990:-1:exon

J1G47_RS11615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11615
old locus tag: J1G47_11615
inference: COORDINATES: protein motif:HMM:NF012027.0
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III restriction-modification system endonuclease
translation: MAGFNFENDLPHQLSAIEDILQMFEYAKISYAQNLETRLKSNPVLELNESQKKRNLAEIQTRSSFAKSLNKTGNTLSNIFDIAMETGTGKTYTYTRAMFSLNQSFGVNKFIVLVPTVAIKAGTKNFLESASARSRFFDDFGKRIELYEVNAKKGNKKDKQQVPENLINFINANDQNSIHILLINMGMLNSETMNIAIDQDMFQEAHGSSFEALSAVKPFLIIDEPHRVKTSGKTWQNVLKLNAQYIVRFGATFDGFENLIHTLTSLDAFEQNLVKGVHAFITQFDGADDMLIKFIGQTESKSEAVFEITHSHKKTPKRLEIAKNGSLGVIHGEMSHLLLNEFNGNTAVLSNGLALQKGEIISPYSFSQSLQEQMLYQAVIRHFDIERTLLTRTPRIKPLSLIFIDDIAGYRDEQGLPDSLKSRFEAIVINEAQKRLANETNEFYKAYLQKTLADISQTHGGYFSDDNNNKDEYIEKQINEILHEKEKLLDLDNPRRFIFSKWTLREGWDNPNVFVICKLRSSGSETSKLQEVGRGLRLPVNEFMHREKGEQFYLNYFVDFSEKDFVADLIKDIREKSGEKVIIPTKLTDELLAKIMQCYPNESKRKIINHLADEHIIDDDLNLLENGWKQLQQAYPKAFEFESSLNNKIQTGIGKKETVLIRKDKYHALKTLWETLNRRVVLNYQIDNEQSFYSLLKQFFAVEVMGKLDKSYTTMQAQELQVNPDEMLIKYGGREKLIENTGYVLSYGEFANELAMSLNVSLKSLHQVLLELNWTEHKHQTRHNIRHIHSLFRKWLLQHFLSTQTISYTEVNSQVHPTAFTDEKGNAKDSILSSDIGRLNETGIVADNYLFETLFYDSPLEKENILLNLDYVTVFTKIPKNTIAIPVAGGGTYSPDFAYVLHHKDGTQTLNLVVETKDAYEFDLRTDEKEKIKYAQILFDKLSSDTGIKVEFKTQFKGKHIERILEELREG
SIO_010081: J1G47_RS11615
subclass of: SO_0000673
so part of: J1G47_RS11615
location: complement(13075..15990)
location: region:13075-15990:-1
so has part: feature:13075-15990:-1:exon

WP_207326867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13075-15990:-1:exon

J1G47_RS11620
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11620
old locus tag: J1G47_11620
so part of: sequence
location: complement(15994..17916)
location: region:15994-17916:-1
so has part: feature:15994-17916:-1:exon
subclass of: SO_0000010

66619943
type: Gene
SIO_000068: ncbigene

position:15994:-1
position: 15994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17916:-1
position: 17916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15994-17916:-1:exon

J1G47_RS11620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11620
old locus tag: J1G47_11620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015939935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MSQSLLDLLKAHNPELFDKEGNFKFADFRTALAEADSTFSQETYRLDWRGKSYAKALVYDENRTLLSANHSHNANNLDSQNVLIQGDNLAVLKHLREAYRKQIKMIYIDPPYNTGSDGFVYQDDRKYTPEQIAQITGESEEYAEYIHGFINAKASSHSAWLTFMYPRLKLARELLKDDGVIFISIDDNEQAQLKLLCDEIFGEGNFVACLPTVMNLKGNNDEFAFAGTHEYTLVYCKDKTSTTFNQLSIDEDDLEDWQEDEQGFYKQGANLKATGTNAPREKRPNLFFPIFIDDNNTIFVTDDNNPPTDFVGELITLHPITNNQEMSWRWSKEKFKNSINDVIISRNGSIGIYKKQRPALGDLPSKKPKTIFYKPEYSSGNGTTQLKQLFDEKVFPNPKPLELLVDFIQLGVNDNDLVLDFFAGSGTTAHAVMQLNSEDNGNRKFICVQLDEPVKPKSEAEKAGFNTVFEITKARIQKSIEKIKAENPDFNGNLGFKEYKIVPTPDNFGTLADNPAHGLQLLENLQLSDTDCQNILTTWCVQDGMPLHHTPKQVDLGGYIAYRYDTVLYLLNKGFDTKHLAVILRRLDDTTDEFNIDKIVILEPHFDSKAKRELTEAIGQYKPRKGNKLYLVVRNRADKG
SIO_010081: J1G47_RS11620
subclass of: SO_0000673
so part of: J1G47_RS11620
location: complement(15994..17916)
location: region:15994-17916:-1
so has part: feature:15994-17916:-1:exon

WP_207326868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15994-17916:-1:exon

J1G47_RS11625
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11625
old locus tag: J1G47_11625
so part of: sequence
location: complement(18104..19399)
location: region:18104-19399:-1
so has part: feature:18104-19399:-1:exon
subclass of: SO_0000010

66619944
type: Gene
SIO_000068: ncbigene

position:18104:-1
position: 18104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19399:-1
position: 19399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18104-19399:-1:exon

J1G47_RS11625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11625
old locus tag: J1G47_11625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005667597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MQRKILQSLQNWKQNLNRKPLIIQGARQVGKTWAMKHFGEQSFEQVAYINFDNNPRMKTLFSGDYDINRLILGLKIESGVDIQAHNTLIIFDEVQEVPQALSSLKYFYENAPEFYIVSAGSLLGMSLHHQVSFPVGKVDFLPLYPMDFHEFLLAVGKQDLVELLNLKDWSLISAMKSRYIELLRQYYFVGGMPEAVKVFIETQNVDAVRQVQKNLLMAYEQDFSKHIRDGQTVQKVRSIWHAIPEQLAKENKKFIYANLQKGARSKDYEIALQWLKDSGLVHSVPRIKKPHLPLSAYQDNAFKLYGLDIGLLSAQSQLDASVLLDGSRIFSEFKDALTEQYVLQQLIANQDNPVFYWATEKGTAEVDFVVQQKQAVIPIEVKAEENLKAKSLKVYVEQFQPEHAFRFSMADYREQDWLVNVPLYGVLLFGE
SIO_010081: J1G47_RS11625
subclass of: SO_0000673
so part of: J1G47_RS11625
location: complement(18104..19399)
location: region:18104-19399:-1
so has part: feature:18104-19399:-1:exon

WP_207326869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18104-19399:-1:exon

J1G47_RS11630
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11630
old locus tag: J1G47_11630
so part of: sequence
location: 19725..19937
location: region:19725-19937:1
so has part: feature:19725-19937:1:exon
subclass of: SO_0000010

66619945
type: Gene
SIO_000068: ncbigene

position:19725:1
position: 19725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19937:1
position: 19937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19725-19937:1:exon

J1G47_RS11630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11630
old locus tag: J1G47_11630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYANQAHHLSFDCLKDYHITTINPNNLATNPVMKGKYTADFSGISTVLPVNNTYYLGSFYKDKMAYFEVK
SIO_010081: J1G47_RS11630
subclass of: SO_0000673
so part of: J1G47_RS11630
location: 19725..19937
location: region:19725-19937:1
so has part: feature:19725-19937:1:exon

WP_010787303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19725-19937:1:exon

J1G47_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11635
old locus tag: J1G47_11635
so part of: sequence
location: complement(20023..20421)
location: region:20023-20421:-1
so has part: feature:20023-20421:-1:exon
subclass of: SO_0000010

66619946
type: Gene
SIO_000068: ncbigene

position:20023:-1
position: 20023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20421:-1
position: 20421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20023-20421:-1:exon

J1G47_RS11635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11635
old locus tag: J1G47_11635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015939937.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MSKIFQIKQASEQTGVHLETIRYYEKQGLIKPTFQANGYRVFDENQLEQLRFIKTCRNIGFSLKDIQILLTFQTTPNHQCDDVDELTQKHLSHINEQIKQLQEVKSFLEQIIGCQNKKIENCQIIKSIKDKG
SIO_010081: J1G47_RS11635
subclass of: SO_0000673
so part of: J1G47_RS11635
location: complement(20023..20421)
location: region:20023-20421:-1
so has part: feature:20023-20421:-1:exon

WP_035496659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20023-20421:-1:exon

J1G47_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11640
old locus tag: J1G47_11640
so part of: sequence
location: 20491..21105
location: region:20491-21105:1
so has part: feature:20491-21105:1:exon
subclass of: SO_0000010

66619947
type: Gene
SIO_000068: ncbigene

position:20491:1
position: 20491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21105:1
position: 21105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20491-21105:1:exon

J1G47_RS11640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11640
old locus tag: J1G47_11640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340850.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MTCQSCCSSNQPIHQSPKYKKALWIVLMLNLSMFFVEIVMGVKSGSTSLLSDSLDFLGDSANYLISLIVLPMALSYRAKASMVKGLTMGVFGLFILITTIYRAFYGEIPSYSEMSIVGFLALLVNVSALLILLKFRDGDSNVRSVWVCSRNDAIGNVAVILAGIAVYFFQSKYPDLIVAFVLAFLALQASQEIIKRAWTELKVS
SIO_010081: J1G47_RS11640
subclass of: SO_0000673
so part of: J1G47_RS11640
location: 20491..21105
location: region:20491-21105:1
so has part: feature:20491-21105:1:exon

WP_035496657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20491-21105:1:exon

J1G47_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11645
old locus tag: J1G47_11645
so part of: sequence
location: complement(21194..21580)
location: region:21194-21580:-1
so has part: feature:21194-21580:-1:exon
subclass of: SO_0000010

66619948
type: Gene
SIO_000068: ncbigene

position:21194:-1
position: 21194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21580:-1
position: 21580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21194-21580:-1:exon

J1G47_RS11645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11645
old locus tag: J1G47_11645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010787306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cu(I)-responsive transcriptional regulator
translation: MNIGQASKATGLSIKQIRDYEKLGLLSNTSRTSSGYRIYDNETLIRLKFIAKARGVGFSLAQIGELLALQDNPHRKSCEVKALANTHIEFLSNKIKELEEMKTVLGAWSDACRGDDMPECPILQGLGG
SIO_010081: J1G47_RS11645
subclass of: SO_0000673
so part of: J1G47_RS11645
location: complement(21194..21580)
location: region:21194-21580:-1
so has part: feature:21194-21580:-1:exon

WP_010787306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21194-21580:-1:exon

J1G47_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11650
old locus tag: J1G47_11650
so part of: sequence
location: complement(21735..21914)
location: region:21735-21914:-1
so has part: feature:21735-21914:-1:exon
subclass of: SO_0000010

66619949
type: Gene
SIO_000068: ncbigene

position:21735:-1
position: 21735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21914:-1
position: 21914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21735-21914:-1:exon

J1G47_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11650
old locus tag: J1G47_11650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006248870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLANQLLAITIATSAVLTNARLAILAVAFWIAILPCARLATAVGVWVFDDVVHNNSPN
SIO_010081: J1G47_RS11650
subclass of: SO_0000673
so part of: J1G47_RS11650
location: complement(21735..21914)
location: region:21735-21914:-1
so has part: feature:21735-21914:-1:exon

WP_010787307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21735-21914:-1:exon

J1G47_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11655
old locus tag: J1G47_11655
so part of: sequence
location: 21974..22720
location: region:21974-22720:1
so has part: feature:21974-22720:1:exon
subclass of: SO_0000010

66619950
type: Gene
SIO_000068: ncbigene

position:21974:1
position: 21974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22720:1
position: 22720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21974-22720:1:exon

J1G47_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11655
old locus tag: J1G47_11655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015939940.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKMFKNRAVQLSALALILATLTACADGKNEVPTHSMVGDNNHTQTTHDSPNNQNGHAEMNHAHMNHSAMAMDTQNAPPHTQAYLAMMNKMGDEMSKAGNLADADTAFAKGMIPHHIGAVEMAKVQLEFGKDETMRKLAQAIIDGQQSEIDLMNAWLAGKDTATQNPQAPHAKSYAAGKAQHEAMMAAINEPNPDVAFAKAMIPHHQGAVEMAKVQLQFGKDEKMKKLAQDIIKAQEPEIKLMQDWLKQ
SIO_010081: J1G47_RS11655
subclass of: SO_0000673
so part of: J1G47_RS11655
location: 21974..22720
location: region:21974-22720:1
so has part: feature:21974-22720:1:exon

WP_015939940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21974-22720:1:exon

J1G47_RS11660
type: Gene
subclass of: SO_0000704
RO_0002162: 738
locus tag: J1G47_RS11660
old locus tag: J1G47_11660
pseudo: true
so part of: sequence
location: 22902..23850
location: region:22902-23850:1
so has part: feature:22902-23850:1:exon
subclass of: SO_0000010

66619951
type: Gene
SIO_000068: ncbigene

position:22902:1
position: 22902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23850:1
position: 23850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22902-23850:1:exon

J1G47_RS11660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 738
locus tag: J1G47_RS11660
old locus tag: J1G47_11660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015939941.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitronate monooxygenase
SIO_010081: J1G47_RS11660
subclass of: SO_0000673
so part of: J1G47_RS11660
location: 22902..23850
location: region:22902-23850:1
so has part: feature:22902-23850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22902-23850:1:exon