Lucilia cuprina isolate Lc7/37 chromosome X, ASM2204524v1, whole genome shotgun sequence.
Lucilia cuprina (Australian sheep blowfly)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia.
REFSEQ INFORMATION: The reference sequence is identical to\nCM039062.1.\nAssembly name: ASM2204524v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the North Carolina State\nUniversity on 2022/02/08. The original whole-genome shotgun project\nhas the accession JAKMAP000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: North Carolina State University\nAssembly Date :: 2017\nAssembly Method :: Meraculous v. March-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 212.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lucilia cuprina Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Lc7/37 is a highly inbred strain derived from the LA07 isolate. The DNA was collected from whole embryos from Lc7/37.
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: polyA evidence [ECO:0006239]
probable serine/threonine-protein kinase DDB_G0282963, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
probable serine/threonine-protein kinase DDB_G0282963, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable serine/threonine-protein kinase DDB_G0282963 isoform X1
probable serine/threonine-protein kinase DDB_G0282963 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC124421359, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC124421359, transcript variant X2
uncharacterized protein LOC124421359 isoform X1
uncharacterized protein LOC124421359 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
probable serine/threonine-protein kinase dyrk2
uncharacterized LOC124421334, transcript variant X1
uncharacterized LOC124421334, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized protein LOC124421334 isoform X1
uncharacterized protein LOC124421334 isoform X2
plasma membrane calcium-transporting ATPase 3, transcript variant X2
plasma membrane calcium-transporting ATPase 3, transcript variant X4
plasma membrane calcium-transporting ATPase 3, transcript variant X6
plasma membrane calcium-transporting ATPase 3, transcript variant X5
plasma membrane calcium-transporting ATPase 3, transcript variant X7
plasma membrane calcium-transporting ATPase 3, transcript variant X8
plasma membrane calcium-transporting ATPase 3, transcript variant X9
plasma membrane calcium-transporting ATPase 3, transcript variant X3
plasma membrane calcium-transporting ATPase 3, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
plasma membrane calcium-transporting ATPase 3, transcript variant X14
plasma membrane calcium-transporting ATPase 3, transcript variant X10
plasma membrane calcium-transporting ATPase 3, transcript variant X11
plasma membrane calcium-transporting ATPase 3, transcript variant X12
plasma membrane calcium-transporting ATPase 3, transcript variant X1
plasma membrane calcium-transporting ATPase 3, transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
plasma membrane calcium-transporting ATPase 3, transcript variant X16
plasma membrane calcium-transporting ATPase 3 isoform X12
plasma membrane calcium-transporting ATPase 3 isoform X13
plasma membrane calcium-transporting ATPase 3 isoform X14
plasma membrane calcium-transporting ATPase 2 isoform X3
plasma membrane calcium-transporting ATPase 2 isoform X5
plasma membrane calcium-transporting ATPase 2 isoform X9
plasma membrane calcium-transporting ATPase 2 isoform X4
plasma membrane calcium-transporting ATPase 2 isoform X6
plasma membrane calcium-transporting ATPase 2 isoform X7
plasma membrane calcium-transporting ATPase 3 isoform X10
plasma membrane calcium-transporting ATPase 2 isoform X11
plasma membrane calcium-transporting ATPase 2 isoform X8
plasma membrane calcium-transporting ATPase 2 isoform X1
plasma membrane calcium-transporting ATPase 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC124421294, transcript variant X2
uncharacterized LOC124421294, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC111687560 isoform X1
uncharacterized protein LOC111687560 isoform X2
uncharacterized protein LOC111687560 isoform X3
uncharacterized LOC111677164, transcript variant X4
uncharacterized LOC111677164, transcript variant X1
uncharacterized LOC111677164, transcript variant X3
uncharacterized LOC111677164, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
serine/threonine-protein kinase WNK1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC111686649, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC111686649, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC124418804, transcript variant X2
uncharacterized LOC124418804, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 14% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC111689956, transcript variant X1
uncharacterized LOC111689956, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
uncharacterized LOC124421349, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC124421349, transcript variant X7
uncharacterized LOC124421349, transcript variant X6
uncharacterized LOC124421349, transcript variant X2
uncharacterized LOC124421349, transcript variant X9
uncharacterized LOC124421349, transcript variant X4
uncharacterized LOC124421349, transcript variant X5
uncharacterized LOC124421349, transcript variant X1
uncharacterized LOC124421349, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized LOC124421278, transcript variant X2
uncharacterized LOC124421278, transcript variant X3
uncharacterized LOC124421278, transcript variant X4
uncharacterized LOC124421278, transcript variant X1
uncharacterized LOC111675694, transcript variant X5
uncharacterized LOC111675694, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC111675694, transcript variant X3
uncharacterized LOC111675694, transcript variant X6
uncharacterized LOC111675694, transcript variant X2
uncharacterized LOC111675694, transcript variant X1
ADP-ribosylation factor-like protein 4A, transcript variant X3
ADP-ribosylation factor-like protein 4A, transcript variant X1
ADP-ribosylation factor-like protein 4A, transcript variant X2
polycomb protein PHO, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
polycomb protein PHO, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
polycomb protein PHO, transcript variant X1
polycomb protein PHO, transcript variant X3
transcriptional regulator CRZ1 isoform X2
transcriptional regulator CRZ1 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
muscle M-line assembly protein unc-89-like
glutamate receptor ionotropic, kainate 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0277255, transcript variant X2
putative uncharacterized protein DDB_G0277255, transcript variant X1
putative uncharacterized protein DDB_G0277255, transcript variant X3
putative uncharacterized protein DDB_G0277255
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
GATA zinc finger domain-containing protein 14, transcript variant X4
GATA zinc finger domain-containing protein 14, transcript variant X1
GATA zinc finger domain-containing protein 14, transcript variant X2
GATA zinc finger domain-containing protein 14, transcript variant X3
GATA zinc finger domain-containing protein 14 isoform X4
GATA zinc finger domain-containing protein 14 isoform X2
GATA zinc finger domain-containing protein 14 isoform X3
transcription factor SOX-6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcription factor SOX-6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
muscle calcium channel subunit alpha-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
protein pangolin, isoforms A/H/I/S, transcript variant X21
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X11
protein pangolin, isoforms A/H/I/S, transcript variant X18
protein pangolin, isoforms A/H/I/S, transcript variant X19
protein pangolin, isoforms A/H/I/S, transcript variant X16
protein pangolin, isoforms A/H/I/S, transcript variant X15
protein pangolin, isoforms A/H/I/S, transcript variant X17
protein pangolin, isoforms A/H/I/S, transcript variant X13
protein pangolin, isoforms A/H/I/S, transcript variant X12
protein pangolin, isoforms A/H/I/S, transcript variant X14
protein pangolin, isoforms A/H/I/S isoform X9
protein pangolin, isoforms A/H/I/S isoform X10
protein pangolin, isoforms A/H/I/S isoform X11
protein pangolin, isoforms A/H/I/S isoform X13
protein pangolin, isoforms A/H/I/S, transcript variant X20
uncharacterized serine-rich protein C215.13 isoform X12
protein pangolin, isoforms A/H/I/S, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X9
protein pangolin, isoforms A/H/I/S, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X5
protein pangolin, isoforms A/H/I/S, transcript variant X3
protein pangolin, isoforms A/H/I/S, transcript variant X4
protein pangolin, isoforms A/H/I/S, transcript variant X2
protein pangolin, isoforms A/H/I/S, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0286901
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
tryptophan--tRNA ligase, cytoplasmic-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
vacuolar protein sorting-associated protein 16 homolog, transcript variant X2
vacuolar protein sorting-associated protein 16 homolog, transcript variant X1
vacuolar protein sorting-associated protein 16 homolog
43 kDa receptor-associated protein of the synapse, transcript variant X1
43 kDa receptor-associated protein of the synapse, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
43 kDa receptor-associated protein of the synapse isoform X1
43 kDa receptor-associated protein of the synapse isoform X2
uncharacterized LOC111685658, transcript variant X1
uncharacterized LOC111685658, transcript variant X2
NADH-ubiquinone oxidoreductase 49 kDa subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 57% coverage of the annotated genomic feature by RNAseq alignments
homeobox protein onecut, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
homeobox protein onecut, transcript variant X1
homeobox protein onecut, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
homeobox protein onecut, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
homeobox protein onecut, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
homeobox protein onecut, transcript variant X4
homeobox protein onecut, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
nuclear transcription factor Y subunit beta-like
transcriptional activator cubitus interruptus
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
probable ATP-dependent RNA helicase spindle-E
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC124418633, transcript variant X1
uncharacterized LOC124418633, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
LOW QUALITY PROTEIN: formylglycine-generating enzyme-like
leukocyte receptor cluster member 1 homolog
zinc finger protein 2, transcript variant X1
zinc finger protein 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
anaphase-promoting complex subunit 1-like
uncharacterized LOC124420700, transcript variant X2
uncharacterized LOC124420700, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC124421322, transcript variant X1
uncharacterized LOC124421322, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC124421318, transcript variant X2
uncharacterized LOC124421318, transcript variant X1
paired box protein Pax-6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
LOW QUALITY PROTEIN: serine protease inhibitor 88Ea-like
5'-nucleotidase domain-containing protein 3
LIM domain-containing protein PLIM2b-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
adapter molecule Crk, transcript variant X2
adapter molecule Crk, transcript variant X1
adapter molecule Crk, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
tetratricopeptide repeat protein 39B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
eukaryotic translation initiation factor 4 gamma 1, transcript variant X2
eukaryotic translation initiation factor 4 gamma 1, transcript variant X1
eukaryotic translation initiation factor 4 gamma 1, transcript variant X3
eukaryotic translation initiation factor 4 gamma 1, transcript variant X4
eukaryotic translation initiation factor 4 gamma 1 isoform X4
eukaryotic translation initiation factor 4 gamma 3 isoform X2
eukaryotic translation initiation factor 4G isoform X1
eukaryotic translation initiation factor 4 gamma 1 isoform X3
GIGYF family protein Gyf-like, transcript variant X1
GIGYF family protein Gyf-like, transcript variant X3
GIGYF family protein Gyf-like, transcript variant X2
GIGYF family protein Gyf-like isoform X1
GIGYF family protein Gyf-like isoform X2
uncharacterized LOC124420169, transcript variant X1
uncharacterized LOC124420169, transcript variant X3
uncharacterized LOC124420169, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized protein LOC124420169 isoform X1
uncharacterized protein LOC124420169 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
tigger transposable element-derived protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC124421466, transcript variant X2
uncharacterized LOC124421466, transcript variant X1
uncharacterized protein LOC124421466 isoform X1
uncharacterized protein LOC124421466 isoform X2
glutamate receptor ionotropic, kainate 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
myosin light chain kinase, smooth muscle-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative nuclease HARBI1
dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X1
dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X2
dual specificity tyrosine-phosphorylation-regulated kinase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
ATP-binding cassette sub-family D member
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC111675080, transcript variant X1
uncharacterized LOC111675080, transcript variant X2
uncharacterized LOC111675080, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
paired box protein Pax-6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC111688479, transcript variant X6
uncharacterized LOC111688479, transcript variant X5
uncharacterized LOC111688479, transcript variant X2
uncharacterized LOC111688479, transcript variant X3
uncharacterized LOC111688479, transcript variant X1
uncharacterized LOC111688479, transcript variant X7
uncharacterized LOC111688479, transcript variant X4
uncharacterized protein LOC111688479 isoform X6
uncharacterized protein LOC111688479 isoform X5
uncharacterized protein LOC111688479 isoform X2
uncharacterized protein LOC111688479 isoform X3
uncharacterized protein LOC111688479 isoform X1
uncharacterized protein LOC111688479 isoform X7
uncharacterized protein LOC111688479 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
cell wall integrity and stress response component 2-like, transcript variant X4
cell wall integrity and stress response component 2-like, transcript variant X2
cell wall integrity and stress response component 2-like, transcript variant X3
cell wall integrity and stress response component 2-like, transcript variant X7
cell wall integrity and stress response component 2-like, transcript variant X6
cell wall integrity and stress response component 2-like, transcript variant X1
cell wall integrity and stress response component 2-like, transcript variant X5
cell wall integrity and stress response component 2-like isoform X2
cell wall integrity and stress response component 2-like isoform X1
cell wall integrity and stress response component 2-like isoform X3
cell wall integrity and stress response component 2-like isoform X4
tau-tubulin kinase homolog Asator, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
tau-tubulin kinase homolog Asator, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
tau-tubulin kinase homolog Asator isoform X2
tau-tubulin kinase homolog Asator isoform X1
RING finger protein 11, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
RING finger protein 11, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
RING finger protein 11, transcript variant X2
RING finger protein 11, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC124421344, transcript variant X1
uncharacterized LOC124421344, transcript variant X2
uncharacterized protein LOC124421344 isoform X1
uncharacterized protein LOC124421344 isoform X2
uncharacterized LOC124421458, transcript variant X1
uncharacterized LOC124421458, transcript variant X2
serine-rich adhesin for platelets, transcript variant X1
serine-rich adhesin for platelets, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
serine-rich adhesin for platelets, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
serine-rich adhesin for platelets, transcript variant X5
uncharacterized protein LOC111687833 isoform X1
uncharacterized protein LOC111687833 isoform X2
uncharacterized protein LOC111687833 isoform X3
serine-rich adhesin for platelets isoform X5
serine-rich adhesin for platelets, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized protein LOC111687833 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC124420880, transcript variant X1
uncharacterized LOC124420880, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC124421010, transcript variant X2
uncharacterized LOC124421010, transcript variant X1
uncharacterized protein LOC124421010 isoform X2
uncharacterized protein LOC124421010 isoform X1
mediator of RNA polymerase II transcription subunit 26, transcript variant X1
mediator of RNA polymerase II transcription subunit 26, transcript variant X2
mediator of RNA polymerase II transcription subunit 26 isoform X2
mediator of RNA polymerase II transcription subunit 26 isoform X1
uncharacterized LOC124421316, transcript variant X1
uncharacterized LOC124421316, transcript variant X2
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X5
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X2
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X4
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X3
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X1
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like, transcript variant X6
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like isoform X1
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like isoform X2
succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like isoform X3
eukaryotic translation initiation factor 4E transporter-like
uncharacterized LOC124421304, transcript variant X1
uncharacterized LOC124421304, transcript variant X2
uncharacterized LOC124421421, transcript variant X4
uncharacterized LOC124421421, transcript variant X2
uncharacterized LOC124421421, transcript variant X5
uncharacterized LOC124421421, transcript variant X1
uncharacterized LOC124421421, transcript variant X3
uncharacterized LOC124421421, transcript variant X7
uncharacterized LOC124421421, transcript variant X6
uncharacterized protein LOC124421421 isoform X3
uncharacterized protein LOC124421421 isoform X1
uncharacterized protein LOC124421421 isoform X2
RING finger protein B-like, transcript variant X1
RING finger protein B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0271606
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
nuclear apoptosis-inducing factor 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC124420588, transcript variant X2
uncharacterized LOC124420588, transcript variant X1