Drosophila yakuba mitochondrion, complete genome.
type: Entry
definition: Drosophila yakuba mitochondrion, complete genome.
sequence version: NC_001322.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_001322.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Drosophila yakuba (fruit fly)
organism: Drosophila yakuba
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
reference: 1
references: 2989784
reference: 2
references: 3001325
reference: 3
references: 6328435
reference: 4
references: 6314262
reference: 5
references: 6304652
reference: 6
references: 6294611
reference: 7
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from X03240.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16019
topology: circular
so has quality: SO_0000988
location: 1..16019
location: region:1-16019:1
RO_0002162: 7245

NC_001322
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The ribosomal RNA genes of Drosophila mitochondrial DNA
author: Clary, D.O.
author: Wolstenholme, D.R.
journal: Nucleic Acids Res.
volume: 13
issue: 11
pages: 4029-4045
year: 1985
pubmed: 2989784

2989784
type: PubMed
SIO_000068: pubmed

2
title: The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code
author: Clary, D.O.
author: Wolstenholme, D.R.
journal: J. Mol. Evol.
volume: 22
issue: 3
pages: 252-271
year: 1985
pubmed: 3001325

3001325
type: PubMed
SIO_000068: pubmed

3
title: Sequence and arrangement of the genes for cytochrome b, URF1, URF4L, URF4, URF5, URF6 and five tRNAs in Drosophila mitochondrial DNA
author: Clary, D.O.
author: Wahleithner, J.A.
author: Wolstenholme, D.R.
journal: Nucleic Acids Res.
volume: 12
issue: 9
pages: 3747-3762
year: 1984
pubmed: 6328435

6328435
type: PubMed
SIO_000068: pubmed

4
title: Genes for cytochrome c oxidase subunit I, URF2, and three tRNAs in Drosophila mitochondrial DNA
author: Clary, D.O.
author: Wolstenholme, D.R.
journal: Nucleic Acids Res.
volume: 11
issue: 19
pages: 6859-6872
year: 1983
pubmed: 6314262

6314262
type: PubMed
SIO_000068: pubmed

5
title: Transfer RNA genes in Drosophila mitochondrial DNA: related 5' flanking sequences and comparisons to mammalian mitochondrial tRNA genes
author: Clary, D.O.
author: Wahleithner, J.A.
author: Wolstenholme, D.R.
journal: Nucleic Acids Res.
volume: 11
issue: 8
pages: 2411-2425
year: 1983
pubmed: 6304652

6304652
type: PubMed
SIO_000068: pubmed

6
title: Drosophila mitochondrial DNA: a novel gene order
author: Clary, D.O.
author: Goddard, J.M.
author: Martin, S.C.
author: Fauron, C.M.
author: Wolstenholme, D.R.
journal: Nucleic Acids Res.
volume: 10
issue: 21
pages: 6619-6637
year: 1982
pubmed: 6294611

6294611
type: PubMed
SIO_000068: pubmed

7
title: Direct Submission
journal: Submitted (08-SEP-1999) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16019:1
position: 16019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16019:1:source
so part of: sequence
organism: Drosophila yakuba
organelle: mitochondrion
mol type: genomic DNA
strain: 2317.6 Ivory Coast
common: fruit fly

7245
type: Taxonomy
SIO_000068: taxonomy

KEF32_t01
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t01
so part of: sequence
location: 1..65
location: region:1-65:1
so has part: feature:1-65:1:exon
subclass of: SO_0000663

64984821
type: Gene
SIO_000068: ncbigene

position:65:1
position: 65
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-65:1:exon

KEF32_t01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t01
product: tRNA-Ile
SIO_010081: KEF32_t01
subclass of: SO_0000673
so part of: KEF32_t01
location: 1..65
location: region:1-65:1
so has part: feature:1-65:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-65:1:exon

KEF32_t02
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t02
so part of: sequence
location: complement(97..165)
location: region:97-165:-1
so has part: feature:97-165:-1:exon
subclass of: SO_0000663

64984807
type: Gene
SIO_000068: ncbigene

position:97:-1
position: 97
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165:-1
position: 165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97-165:-1:exon

KEF32_t02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t02
product: tRNA-Gln
SIO_010081: KEF32_t02
subclass of: SO_0000673
so part of: KEF32_t02
location: complement(97..165)
location: region:97-165:-1
so has part: feature:97-165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97-165:-1:exon

KEF32_t03
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t03
so part of: sequence
location: 174..242
location: region:174-242:1
so has part: feature:174-242:1:exon
subclass of: SO_0000663

64984808
type: Gene
SIO_000068: ncbigene

position:174:1
position: 174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242:1
position: 242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174-242:1:exon

KEF32_t03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t03
product: tRNA-Met
SIO_010081: KEF32_t03
subclass of: SO_0000673
so part of: KEF32_t03
location: 174..242
location: region:174-242:1
so has part: feature:174-242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174-242:1:exon

KEF32_p13
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND2
locus tag: KEF32_p13
so part of: sequence
location: 243..1266
location: region:243-1266:1
so has part: feature:243-1266:1:exon
subclass of: SO_0000010

807621
type: Gene
SIO_000068: ncbigene

position:243:1
position: 243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266:1
position: 1266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243-1266:1:exon

KEF32_p13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND2
locus tag: KEF32_p13
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:1266,aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MFYNSSKILFTTIMIIGTLITVTSNSWLGAWMGLEINLLSFIPLLSDNNNLMSTEASLKYFLTQALASTVLLFSSILLMLANNLNNEINESFTSMIIMSALLLKSGAAPFHFWFPNMMEGLTWMNALMLMTWQKIAPLMLISYLNIKNLLLISVILSVIIGAIGGLNQTSLRKLMAFSSINHLGWMLSSLMISESIWLIYFIFYSFLSFVLTFMFNIFKLFHLNQLFSWFVNSKILKFSLFMNFLSLGGLPPFLGFLPKWLVIQQLTMCNQYFLLTLMMMSTLITLFFYLRICYSAFMLNYFENNWIMEMNMNSNNTNLYLIMTFFSIFGLFLISLFFFML
SIO_010081: KEF32_p13
subclass of: SO_0000673
so part of: KEF32_p13
location: 243..1266
location: region:243-1266:1
so has part: feature:243-1266:1:exon

NP_006902.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013184
type: FLYBASE
SIO_000068: flybase

P03895
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:243-1266:1:exon

KEF32_t04
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t04
so part of: sequence
location: 1267..1333
location: region:1267-1333:1
so has part: feature:1267-1333:1:exon
subclass of: SO_0000663

64984798
type: Gene
SIO_000068: ncbigene

position:1267:1
position: 1267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333:1
position: 1333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267-1333:1:exon

KEF32_t04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t04
product: tRNA-Trp
SIO_010081: KEF32_t04
subclass of: SO_0000673
so part of: KEF32_t04
location: 1267..1333
location: region:1267-1333:1
so has part: feature:1267-1333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267-1333:1:exon

KEF32_t05
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t05
so part of: sequence
location: complement(1326..1388)
location: region:1326-1388:-1
so has part: feature:1326-1388:-1:exon
subclass of: SO_0000663

64984809
type: Gene
SIO_000068: ncbigene

position:1326:-1
position: 1326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388:-1
position: 1388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326-1388:-1:exon

KEF32_t05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t05
product: tRNA-Cys
SIO_010081: KEF32_t05
subclass of: SO_0000673
so part of: KEF32_t05
location: complement(1326..1388)
location: region:1326-1388:-1
so has part: feature:1326-1388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1326-1388:-1:exon

KEF32_t06
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t06
so part of: sequence
location: complement(1401..1468)
location: region:1401-1468:-1
so has part: feature:1401-1468:-1:exon
subclass of: SO_0000663

64984810
type: Gene
SIO_000068: ncbigene

position:1401:-1
position: 1401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468:-1
position: 1468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401-1468:-1:exon

KEF32_t06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t06
product: tRNA-Tyr
SIO_010081: KEF32_t06
subclass of: SO_0000673
so part of: KEF32_t06
location: complement(1401..1468)
location: region:1401-1468:-1
so has part: feature:1401-1468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1401-1468:-1:exon

KEF32_p12
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: COX1
locus tag: KEF32_p12
so part of: sequence
location: <1474..3009
location: region:1474-3009:1
so has part: feature:1474-3009:1:exon
subclass of: SO_0000010

807622
type: Gene
SIO_000068: ncbigene

position:1474:1
position: 1474
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3009:1
position: 3009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474-3009:1:exon

KEF32_p12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: COX1
locus tag: KEF32_p12
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit I
translation: SRQWLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPPLSSGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGITLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIHWYPLFTGLTLNNKWLKSQFIIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNVVSTIGSTISLLGILFFFYIIWESLVSQRQVIYPIQLNSSIEWYQNTPPAEHSYSELPLLTN
SIO_010081: KEF32_p12
subclass of: SO_0000673
so part of: KEF32_p12
location: <1474..3009
location: region:1474-3009:1
so has part: feature:1474-3009:1:exon

NP_006903.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013179
type: FLYBASE
SIO_000068: flybase

P00400
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:1474-3009:1:exon

KEF32_t07
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t07
so part of: sequence
location: 3012..3077
location: region:3012-3077:1
so has part: feature:3012-3077:1:exon
subclass of: SO_0000663

64984799
type: Gene
SIO_000068: ncbigene

position:3012:1
position: 3012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077:1
position: 3077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012-3077:1:exon

KEF32_t07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t07
product: tRNA-Leu
codon recognized: UUR
SIO_010081: KEF32_t07
subclass of: SO_0000673
so part of: KEF32_t07
location: 3012..3077
location: region:3012-3077:1
so has part: feature:3012-3077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3012-3077:1:exon

KEF32_p11
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: COX2
locus tag: KEF32_p11
so part of: sequence
location: 3083..3767
location: region:3083-3767:1
so has part: feature:3083-3767:1:exon
subclass of: SO_0000010

807630
type: Gene
SIO_000068: ncbigene

position:3083:1
position: 3083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767:1
position: 3767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083-3767:1:exon

KEF32_p11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: COX2
locus tag: KEF32_p11
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3767,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit II
translation: MSTWANLGLQDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFFNNYVNRFLLHGQLIEMIWTILPAIILLFIALPSLRLLYLLDEINEPSVTLKSIGHQWYWSYEYSDFNNIEFDSYMIPTNELAIDGFRLLDVDNRVILPMNSQIRILVTAADVIHSWTVPALGVKVDGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFMPIVIESVPVNNFIKWISSNNS
SIO_010081: KEF32_p11
subclass of: SO_0000673
so part of: KEF32_p11
location: 3083..3767
location: region:3083-3767:1
so has part: feature:3083-3767:1:exon

NP_006904.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013180
type: FLYBASE
SIO_000068: flybase

P00409
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:3083-3767:1:exon

KEF32_t08
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t08
so part of: sequence
location: 3768..3838
location: region:3768-3838:1
so has part: feature:3768-3838:1:exon
subclass of: SO_0000663

64984800
type: Gene
SIO_000068: ncbigene

position:3768:1
position: 3768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3838:1
position: 3838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3768-3838:1:exon

KEF32_t08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t08
product: tRNA-Lys
SIO_010081: KEF32_t08
subclass of: SO_0000673
so part of: KEF32_t08
location: 3768..3838
location: region:3768-3838:1
so has part: feature:3768-3838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3768-3838:1:exon

KEF32_t09
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t09
so part of: sequence
location: 3843..3910
location: region:3843-3910:1
so has part: feature:3843-3910:1:exon
subclass of: SO_0000663

64984811
type: Gene
SIO_000068: ncbigene

position:3843:1
position: 3843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3910:1
position: 3910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843-3910:1:exon

KEF32_t09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t09
product: tRNA-Asp
SIO_010081: KEF32_t09
subclass of: SO_0000673
so part of: KEF32_t09
location: 3843..3910
location: region:3843-3910:1
so has part: feature:3843-3910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3843-3910:1:exon

KEF32_p10
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ATP8
locus tag: KEF32_p10
so part of: sequence
location: 3911..4072
location: region:3911-4072:1
so has part: feature:3911-4072:1:exon
subclass of: SO_0000010

807633
type: Gene
SIO_000068: ncbigene

position:3911:1
position: 3911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072:1
position: 4072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3911-4072:1:exon

KEF32_p10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ATP8
locus tag: KEF32_p10
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MPQMAPISWLLLFIVFSITFILFCSINYYSYMPTSPKSNELKNINLNSMNWKW
SIO_010081: KEF32_p10
subclass of: SO_0000673
so part of: KEF32_p10
location: 3911..4072
location: region:3911-4072:1
so has part: feature:3911-4072:1:exon

NP_006905.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013178
type: FLYBASE
SIO_000068: flybase

P03933
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:3911-4072:1:exon

KEF32_p09
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ATP6
locus tag: KEF32_p09
so part of: sequence
location: 4066..4740
location: region:4066-4740:1
so has part: feature:4066-4740:1:exon
subclass of: SO_0000010

807632
type: Gene
SIO_000068: ncbigene

position:4066:1
position: 4066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4740:1
position: 4740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4066-4740:1:exon

KEF32_p09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ATP6
locus tag: KEF32_p09
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MMTNLFSVFDPSAIFNLSLNWLSTFLGLLMIPSIYWLMPSRYNIFWNSILLTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYLLVTFLLVAQIALLVLESAVTMIQSYVFAVLSTLYSSEVN
SIO_010081: KEF32_p09
subclass of: SO_0000673
so part of: KEF32_p09
location: 4066..4740
location: region:4066-4740:1
so has part: feature:4066-4740:1:exon

NP_006906.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013177
type: FLYBASE
SIO_000068: flybase

P00851
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:4066-4740:1:exon

KEF32_p09
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7245
gene: ATP6
locus tag: KEF32_p09
note: pot. stem loop structure involved in transcription termination
SIO_010081: KEF32_p09
subclass of: SO_0000673
so part of: KEF32_p09
location: 4682..4739
location: region:4682-4739:1
so has part: feature:4682-4739:1:exon

position:4682:1
position: 4682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4739:1
position: 4739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682-4739:1:exon

KEF32_p09
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 7245
gene: ATP6
locus tag: KEF32_p09
note: inverted repeat a
rpt type: inverted
SIO_010081: KEF32_p09
subclass of: SO_0000673
so part of: KEF32_p09
location: 4682..4688
location: region:4682-4688:1
so has part: feature:4682-4688:1:exon

position:4688:1
position: 4688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682-4688:1:exon

KEF32_p09
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 7245
gene: ATP6
locus tag: KEF32_p09
note: inverted repeat a'
rpt type: inverted
SIO_010081: KEF32_p09
subclass of: SO_0000673
so part of: KEF32_p09
location: 4733..4739
location: region:4733-4739:1
so has part: feature:4733-4739:1:exon

position:4733:1
position: 4733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4733-4739:1:exon

KEF32_p08
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: COX3
locus tag: KEF32_p08
so part of: sequence
location: 4740..5528
location: region:4740-5528:1
so has part: feature:4740-5528:1:exon
subclass of: SO_0000010

807631
type: Gene
SIO_000068: ncbigene

position:5528:1
position: 5528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740-5528:1:exon

KEF32_p08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: COX3
locus tag: KEF32_p08
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit III
translation: MSTHSNHPFHLVDYSPWPLTGAIGAMTTVSGMVKWFHQYDISLFLLGNIITILTVYQWWRDVSREGTYQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPFQIPLLNTAILLASGVTVTWAHHSLMESNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIADSVYGSTFYMATGFHGVHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIYWWGG
SIO_010081: KEF32_p08
subclass of: SO_0000673
so part of: KEF32_p08
location: 4740..5528
location: region:4740-5528:1
so has part: feature:4740-5528:1:exon

NP_006907.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013181
type: FLYBASE
SIO_000068: flybase

P00418
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:4740-5528:1:exon

KEF32_t10
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t10
so part of: sequence
location: 5549..5613
location: region:5549-5613:1
so has part: feature:5549-5613:1:exon
subclass of: SO_0000663

64984801
type: Gene
SIO_000068: ncbigene

position:5549:1
position: 5549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613:1
position: 5613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5549-5613:1:exon

KEF32_t10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t10
product: tRNA-Gly
SIO_010081: KEF32_t10
subclass of: SO_0000673
so part of: KEF32_t10
location: 5549..5613
location: region:5549-5613:1
so has part: feature:5549-5613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5549-5613:1:exon

KEF32_p07
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND3
locus tag: KEF32_p07
so part of: sequence
location: 5614..5967
location: region:5614-5967:1
so has part: feature:5614-5967:1:exon
subclass of: SO_0000010

807626
type: Gene
SIO_000068: ncbigene

position:5614:1
position: 5614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5967:1
position: 5967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5614-5967:1:exon

KEF32_p07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND3
locus tag: KEF32_p07
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MFSIIIIASVILLITTVVMFLASILSKKALIDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIILKYSNIMIWTITSIIFILILLIGLYHEWNQGMLNWSN
SIO_010081: KEF32_p07
subclass of: SO_0000673
so part of: KEF32_p07
location: 5614..5967
location: region:5614-5967:1
so has part: feature:5614-5967:1:exon

NP_006908.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013204
type: FLYBASE
SIO_000068: flybase

P07705
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:5614-5967:1:exon

KEF32_t11
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t11
so part of: sequence
location: 5979..6043
location: region:5979-6043:1
so has part: feature:5979-6043:1:exon
subclass of: SO_0000663

64984802
type: Gene
SIO_000068: ncbigene

position:5979:1
position: 5979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6043:1
position: 6043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5979-6043:1:exon

KEF32_t11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t11
product: tRNA-Ala
SIO_010081: KEF32_t11
subclass of: SO_0000673
so part of: KEF32_t11
location: 5979..6043
location: region:5979-6043:1
so has part: feature:5979-6043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5979-6043:1:exon

KEF32_t12
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t12
so part of: sequence
location: 6071..6134
location: region:6071-6134:1
so has part: feature:6071-6134:1:exon
subclass of: SO_0000663

64984812
type: Gene
SIO_000068: ncbigene

position:6071:1
position: 6071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6134:1
position: 6134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6071-6134:1:exon

KEF32_t12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t12
product: tRNA-Arg
SIO_010081: KEF32_t12
subclass of: SO_0000673
so part of: KEF32_t12
location: 6071..6134
location: region:6071-6134:1
so has part: feature:6071-6134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6071-6134:1:exon

KEF32_t13
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t13
so part of: sequence
location: 6135..6199
location: region:6135-6199:1
so has part: feature:6135-6199:1:exon
subclass of: SO_0000663

64984813
type: Gene
SIO_000068: ncbigene

position:6135:1
position: 6135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6199:1
position: 6199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6135-6199:1:exon

KEF32_t13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t13
product: tRNA-Asn
SIO_010081: KEF32_t13
subclass of: SO_0000673
so part of: KEF32_t13
location: 6135..6199
location: region:6135-6199:1
so has part: feature:6135-6199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6135-6199:1:exon

KEF32_t14
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t14
so part of: sequence
location: 6200..6267
location: region:6200-6267:1
so has part: feature:6200-6267:1:exon
subclass of: SO_0000663

64984814
type: Gene
SIO_000068: ncbigene

position:6200:1
position: 6200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6267:1
position: 6267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6200-6267:1:exon

KEF32_t14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t14
product: tRNA-Ser
codon recognized: AGY
SIO_010081: KEF32_t14
subclass of: SO_0000673
so part of: KEF32_t14
location: 6200..6267
location: region:6200-6267:1
so has part: feature:6200-6267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6200-6267:1:exon

KEF32_t15
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t15
so part of: sequence
location: 6268..6335
location: region:6268-6335:1
so has part: feature:6268-6335:1:exon
subclass of: SO_0000663

64984815
type: Gene
SIO_000068: ncbigene

position:6268:1
position: 6268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6335:1
position: 6335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6268-6335:1:exon

KEF32_t15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t15
product: tRNA-Glu
SIO_010081: KEF32_t15
subclass of: SO_0000673
so part of: KEF32_t15
location: 6268..6335
location: region:6268-6335:1
so has part: feature:6268-6335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6268-6335:1:exon

KEF32_t16
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t16
so part of: sequence
location: complement(6354..6419)
location: region:6354-6419:-1
so has part: feature:6354-6419:-1:exon
subclass of: SO_0000663

64984816
type: Gene
SIO_000068: ncbigene

position:6354:-1
position: 6354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6419:-1
position: 6419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6354-6419:-1:exon

KEF32_t16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t16
product: tRNA-Phe
SIO_010081: KEF32_t16
subclass of: SO_0000673
so part of: KEF32_t16
location: complement(6354..6419)
location: region:6354-6419:-1
so has part: feature:6354-6419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6354-6419:-1:exon

KEF32_p06
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND5
locus tag: KEF32_p06
so part of: sequence
location: complement(6420..8139)
location: region:6420-8139:-1
so has part: feature:6420-8139:-1:exon
subclass of: SO_0000010

807625
type: Gene
SIO_000068: ncbigene

position:6420:-1
position: 6420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8139:-1
position: 8139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420-8139:-1:exon

KEF32_p06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND5
locus tag: KEF32_p06
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(6420),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MCSISFINLISISLTCFLLSLYYLLNNMVYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIFYSKEYMESDENINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYIFYLEVMQNEFSMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSTSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNINMFSFFLYFFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWVMLRGMLGLLFMSIIGGSMLNWLIFPFPYMICLPGYLKMLTLFVCIVGGLFGYLISISNLYSLNKSLLNYNLTLFLGSMWFMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYYKLSNYSKTLFLMHNNSLKIYLMLFVFWIMILFSFLLFL
SIO_010081: KEF32_p06
subclass of: SO_0000673
so part of: KEF32_p06
location: complement(6420..8139)
location: region:6420-8139:-1
so has part: feature:6420-8139:-1:exon

NP_006909.1
type: Protein
SIO_000068: ncbiprotein

P07706
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:6420-8139:-1:exon

KEF32_t17
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t17
so part of: sequence
location: complement(8155..8220)
location: region:8155-8220:-1
so has part: feature:8155-8220:-1:exon
subclass of: SO_0000663

64984803
type: Gene
SIO_000068: ncbigene

position:8155:-1
position: 8155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8220:-1
position: 8220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8155-8220:-1:exon

KEF32_t17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t17
product: tRNA-His
SIO_010081: KEF32_t17
subclass of: SO_0000673
so part of: KEF32_t17
location: complement(8155..8220)
location: region:8155-8220:-1
so has part: feature:8155-8220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8155-8220:-1:exon

KEF32_p05
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND4
locus tag: KEF32_p05
so part of: sequence
location: complement(8221..9559)
location: region:8221-9559:-1
so has part: feature:8221-9559:-1:exon
subclass of: SO_0000010

807624
type: Gene
SIO_000068: ncbigene

position:8221:-1
position: 8221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9559:-1
position: 9559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8221-9559:-1:exon

KEF32_p05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND4
locus tag: KEF32_p05
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(8221),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MLKIILFLLFLTPVCFINNMYWMVQIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLMSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSSGKIREYLLMLLHWLPLNLLILKSESCILWL
SIO_010081: KEF32_p05
subclass of: SO_0000673
so part of: KEF32_p05
location: complement(8221..9559)
location: region:8221-9559:-1
so has part: feature:8221-9559:-1:exon

NP_006910.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013185
type: FLYBASE
SIO_000068: flybase

P07707
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:8221-9559:-1:exon

KEF32_p04
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND4L
locus tag: KEF32_p04
so part of: sequence
location: complement(9559..9849)
location: region:9559-9849:-1
so has part: feature:9559-9849:-1:exon
subclass of: SO_0000010

807623
type: Gene
SIO_000068: ncbigene

position:9849:-1
position: 9849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9559-9849:-1:exon

KEF32_p04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND4L
locus tag: KEF32_p04
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MIMILYWSLPMILFILGLFCFVSNRKHLLSMLLSLEFIVLMLFFMLFIYLNMLNYENYFSMMFLTFSVCEGALGLSILVSMIRTHGNDYFQSFSIM
SIO_010081: KEF32_p04
subclass of: SO_0000673
so part of: KEF32_p04
location: complement(9559..9849)
location: region:9559-9849:-1
so has part: feature:9559-9849:-1:exon

NP_006911.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013186
type: FLYBASE
SIO_000068: flybase

P07708
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:9559-9849:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7245
note: pot. stem loop structure involved in transcription termination
so part of: sequence
location: 9559..9613
location: region:9559-9613:1
so has part: feature:9559-9613:1:region

position:9559:1
position: 9559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9613:1
position: 9613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9559-9613:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 7245
note: inverted repeat b
rpt type: inverted
so part of: sequence
location: 9559..9569
location: region:9559-9569:1
so has part: feature:9559-9569:1:region

position:9569:1
position: 9569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9559-9569:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 7245
note: inverted repeat b'
rpt type: inverted
so part of: sequence
location: 9603..9613
location: region:9603-9613:1
so has part: feature:9603-9613:1:region

position:9603:1
position: 9603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9603-9613:1:region

KEF32_t18
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t18
so part of: sequence
location: 9852..9916
location: region:9852-9916:1
so has part: feature:9852-9916:1:exon
subclass of: SO_0000663

64984804
type: Gene
SIO_000068: ncbigene

position:9852:1
position: 9852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9916:1
position: 9916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9852-9916:1:exon

KEF32_t18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t18
product: tRNA-Thr
SIO_010081: KEF32_t18
subclass of: SO_0000673
so part of: KEF32_t18
location: 9852..9916
location: region:9852-9916:1
so has part: feature:9852-9916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9852-9916:1:exon

KEF32_t19
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t19
so part of: sequence
location: complement(9917..9980)
location: region:9917-9980:-1
so has part: feature:9917-9980:-1:exon
subclass of: SO_0000663

64984817
type: Gene
SIO_000068: ncbigene

position:9917:-1
position: 9917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9980:-1
position: 9980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9917-9980:-1:exon

KEF32_t19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t19
product: tRNA-Pro
SIO_010081: KEF32_t19
subclass of: SO_0000673
so part of: KEF32_t19
location: complement(9917..9980)
location: region:9917-9980:-1
so has part: feature:9917-9980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9917-9980:-1:exon

KEF32_p03
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND6
locus tag: KEF32_p03
so part of: sequence
location: 9987..10511
location: region:9987-10511:1
so has part: feature:9987-10511:1:exon
subclass of: SO_0000010

807629
type: Gene
SIO_000068: ncbigene

position:9987:1
position: 9987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10511:1
position: 10511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9987-10511:1:exon

KEF32_p03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND6
locus tag: KEF32_p03
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MIQLMLYSLIITTSIIFFNMIHPLALGLTLLIQTIFVCLLSGLMTKSFWYSYILFLIFLGGMLVLFIYVTSLASNEMFNLSIKLTLFSMFILFFMFILSMILDKTSITLFLMNNEMQSIIEMNSYFTENSLSLNKLYNFPTNFVTILLMNYLLITLIVVVKITKLFKGPIRMMS
SIO_010081: KEF32_p03
subclass of: SO_0000673
so part of: KEF32_p03
location: 9987..10511
location: region:9987-10511:1
so has part: feature:9987-10511:1:exon

NP_006912.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013187
type: FLYBASE
SIO_000068: flybase

P07709
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:9987-10511:1:exon

KEF32_p02
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: CYTB
locus tag: KEF32_p02
so part of: sequence
location: 10515..11651
location: region:10515-11651:1
so has part: feature:10515-11651:1:exon
subclass of: SO_0000010

807628
type: Gene
SIO_000068: ncbigene

position:10515:1
position: 10515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11651:1
position: 11651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10515-11651:1:exon

KEF32_p02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: CYTB
locus tag: KEF32_p02
codon start: 1
transl table: 5
product: cytochrome b
translation: MHKPLRNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADVNLAFYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYLFTPTWLVGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLGDPDNFIPANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFYNLSKFRGIQFYPINQILFWSMLVTVILLTWIGARPVEEPYVLIGQILTIIYFLYYLINPLVTKWWDNLLN
SIO_010081: KEF32_p02
subclass of: SO_0000673
so part of: KEF32_p02
location: 10515..11651
location: region:10515-11651:1
so has part: feature:10515-11651:1:exon

NP_006913.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013182
type: FLYBASE
SIO_000068: flybase

P07704
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:10515-11651:1:exon

KEF32_t20
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t20
so part of: sequence
location: 11658..11723
location: region:11658-11723:1
so has part: feature:11658-11723:1:exon
subclass of: SO_0000663

64984805
type: Gene
SIO_000068: ncbigene

position:11658:1
position: 11658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11723:1
position: 11723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11658-11723:1:exon

KEF32_t20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t20
product: tRNA-Ser
codon recognized: UCN
SIO_010081: KEF32_t20
subclass of: SO_0000673
so part of: KEF32_t20
location: 11658..11723
location: region:11658-11723:1
so has part: feature:11658-11723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11658-11723:1:exon

KEF32_p01
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
gene: ND1
locus tag: KEF32_p01
so part of: sequence
location: complement(11706..12680)
location: region:11706-12680:-1
so has part: feature:11706-12680:-1:exon
subclass of: SO_0000010

807627
type: Gene
SIO_000068: ncbigene

position:11706:-1
position: 11706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12680:-1
position: 12680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11706-12680:-1:exon

KEF32_p01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7245
gene: ND1
locus tag: KEF32_p01
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MEFILSLIGSLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTISYEVSLALIMLSFIFLIGSYNMIYFFYYQIYMWFLIILFPMSLVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSFLLWIFFSKKLMEN
SIO_010081: KEF32_p01
subclass of: SO_0000673
so part of: KEF32_p01
location: complement(11706..12680)
location: region:11706-12680:-1
so has part: feature:11706-12680:-1:exon

NP_006914.1
type: Protein
SIO_000068: ncbiprotein

FBgn0013183
type: FLYBASE
SIO_000068: flybase

P07710
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:11706-12680:-1:exon

KEF32_t21
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t21
so part of: sequence
location: complement(12691..12755)
location: region:12691-12755:-1
so has part: feature:12691-12755:-1:exon
subclass of: SO_0000663

64984806
type: Gene
SIO_000068: ncbigene

position:12691:-1
position: 12691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12755:-1
position: 12755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12691-12755:-1:exon

KEF32_t21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t21
product: tRNA-Leu
codon recognized: CUN
SIO_010081: KEF32_t21
subclass of: SO_0000673
so part of: KEF32_t21
location: complement(12691..12755)
location: region:12691-12755:-1
so has part: feature:12691-12755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12691-12755:-1:exon

KEF32_r02
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_r02
so part of: sequence
location: complement(12756..14081)
location: region:12756-14081:-1
so has part: feature:12756-14081:-1:exon
subclass of: SO_0000573

64984818
type: Gene
SIO_000068: ncbigene

position:12756:-1
position: 12756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14081:-1
position: 14081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12756-14081:-1:exon

KEF32_r02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7245
locus tag: KEF32_r02
product: l-rRNA
SIO_010081: KEF32_r02
subclass of: SO_0000673
so part of: KEF32_r02
location: complement(12756..14081)
location: region:12756-14081:-1
so has part: feature:12756-14081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12756-14081:-1:exon

conflict
type: nucleotide
subclass of: obo
RO_0002162: 7245
note: T is inserted in [2]
citation: [6]
so part of: sequence
location: 12968..12969
location: region:12968-12969:1
so has part: feature:12968-12969:1:region

position:12968:1
position: 12968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12969:1
position: 12969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12968-12969:1:region

conflict
type: nucleotide
subclass of: obo
RO_0002162: 7245
note: C is T in [2]
citation: [6]
so part of: sequence
location: 12970
location: region:12970-12970:1
so has part: feature:12970-12970:1:region

position:12970:1
position: 12970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12970-12970:1:region

KEF32_t22
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_t22
so part of: sequence
location: complement(14082..14153)
location: region:14082-14153:-1
so has part: feature:14082-14153:-1:exon
subclass of: SO_0000663

64984819
type: Gene
SIO_000068: ncbigene

position:14082:-1
position: 14082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14153:-1
position: 14153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14153:-1:exon

KEF32_t22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7245
locus tag: KEF32_t22
product: tRNA-Val
SIO_010081: KEF32_t22
subclass of: SO_0000673
so part of: KEF32_t22
location: complement(14082..14153)
location: region:14082-14153:-1
so has part: feature:14082-14153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14153:-1:exon

KEF32_r01
type: Gene
subclass of: SO_0000704
RO_0002162: 7245
locus tag: KEF32_r01
so part of: sequence
location: complement(14154..14942)
location: region:14154-14942:-1
so has part: feature:14154-14942:-1:exon
subclass of: SO_0000573

64984820
type: Gene
SIO_000068: ncbigene

position:14154:-1
position: 14154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14942:-1
position: 14942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14154-14942:-1:exon

KEF32_r01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7245
locus tag: KEF32_r01
product: s-rRNA
SIO_010081: KEF32_r01
subclass of: SO_0000673
so part of: KEF32_r01
location: complement(14154..14942)
location: region:14154-14942:-1
so has part: feature:14154-14942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14154-14942:-1:exon

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 7245
note: A+T-rich region containing origin of replication
so part of: sequence
location: 14943..16019
location: region:14943-16019:1
so has part: feature:14943-16019:1:region

position:14943:1
position: 14943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14943-16019:1:region