Drosophila pseudoobscura strain MV2-25 mitochondrion, complete sequence, whole genome shotgun sequence.
type: Entry
definition: Drosophila pseudoobscura strain MV2-25 mitochondrion, complete sequence, whole genome shotgun sequence.
sequence version: NC_046603.1
sequence date: 2023-04-03
sequence: sequence
division: CON
label: NC_046603.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
dblink: SAMN13616452
keyword: WGS
keyword: RefSeq
source: mitochondrion Drosophila pseudoobscura
organism: Drosophila pseudoobscura
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to CM020873.\nAnnotation was added in March 2020.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.7\nAssembly Name :: UCI_Dpse_MV25\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 280.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16118
topology: circular
so has quality: SO_0000988
location: 1..16118
location: region:1-16118:1
RO_0002162: 7237

NC_046603
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

SAMN13616452
type: BioSample
SIO_000068: biosample

1
title: Evolutionary conservation of topologically associating domains and their influences on genome synteny and structural variations in Drosophila
author: Liao, Y.
author: Chakraborty, M.
author: Zhang, X.
author: Emerson, J.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (26-MAR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Liao, Y.
author: Chakraborty, M.
author: Zhang, X.
author: Emerson, J.
journal: Submitted (18-DEC-2019) Ecology and Evolutionary Biology, University of California, Irvine, 5427 McGaugh Hall, Irvine, CA 92697-2525, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16118:1
position: 16118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16118:1:source
so part of: sequence
organism: Drosophila pseudoobscura
organelle: mitochondrion
mol type: genomic DNA
strain: MV2-25
sex: female
tissue type: whole body
dev stage: adult

7237
type: Taxonomy
SIO_000068: taxonomy

HCS66_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: COX2
locus tag: HCS66_mgp01
so part of: sequence
location: join(15693..16118,1..262)
location: region:1-16118:1
so has part: feature:15693-16118:1:exon
so has part: feature:1-262:1:exon
subclass of: SO_0000010

44805055
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:15693-16118:1:exon

position:15693:1
position: 15693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-262:1:exon

position:262:1
position: 262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HCS66_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: COX2
locus tag: HCS66_mgp01
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:262,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit II
translation: MSTWANLGLQDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFFNSYVNRFLLHGQLIEMIWTILPAIILLFIAMPSLRLLYLLDEINEPSITLKSIGHQWYWSYEYSDFNNVEFDSYMIPTNELSNDGFRLLDVDNRIVLPMNSQIRILVTAADVIHSWTVPALGVKVDGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFMPIVIESVPVNYFIKWISNSVNS
SIO_010081: HCS66_mgp01
subclass of: SO_0000673
so part of: HCS66_mgp01
location: join(15693..16118,1..262)
location: region:1-16118:1
so has part: feature:15693-16118:1:exon
so has part: feature:1-262:1:exon

YP_009742595.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15693-16118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-262:1:exon

HCS66_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnK
locus tag: HCS66_mgt01
so part of: sequence
location: 263..333
location: region:263-333:1
so has part: feature:263-333:1:exon
subclass of: SO_0000663

44805019
type: Gene
SIO_000068: ncbigene

position:263:1
position: 263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333:1
position: 333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263-333:1:exon

HCS66_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnK
locus tag: HCS66_mgt01
product: tRNA-Lys
SIO_010081: HCS66_mgt01
subclass of: SO_0000673
so part of: HCS66_mgt01
location: 263..333
location: region:263-333:1
so has part: feature:263-333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263-333:1:exon

HCS66_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnD
locus tag: HCS66_mgt02
so part of: sequence
location: 372..438
location: region:372-438:1
so has part: feature:372-438:1:exon
subclass of: SO_0000663

44805020
type: Gene
SIO_000068: ncbigene

position:372:1
position: 372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438:1
position: 438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372-438:1:exon

HCS66_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnD
locus tag: HCS66_mgt02
product: tRNA-Asp
SIO_010081: HCS66_mgt02
subclass of: SO_0000673
so part of: HCS66_mgt02
location: 372..438
location: region:372-438:1
so has part: feature:372-438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372-438:1:exon

HCS66_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ATP8
locus tag: HCS66_mgp13
so part of: sequence
location: 439..600
location: region:439-600:1
so has part: feature:439-600:1:exon
subclass of: SO_0000010

44805021
type: Gene
SIO_000068: ncbigene

position:439:1
position: 439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600:1
position: 600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439-600:1:exon

HCS66_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ATP8
locus tag: HCS66_mgp13
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MPQMAPISWLLLFIVFSITFILFCSINYYSFMPSSPKSNELKNINLNSMNWKW
SIO_010081: HCS66_mgp13
subclass of: SO_0000673
so part of: HCS66_mgp13
location: 439..600
location: region:439-600:1
so has part: feature:439-600:1:exon

YP_009742596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439-600:1:exon

HCS66_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ATP6
locus tag: HCS66_mgp12
so part of: sequence
location: 594..1268
location: region:594-1268:1
so has part: feature:594-1268:1:exon
subclass of: SO_0000010

44805022
type: Gene
SIO_000068: ncbigene

position:594:1
position: 594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268:1
position: 1268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594-1268:1:exon

HCS66_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ATP6
locus tag: HCS66_mgp12
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MMTNLFSVFDPSAIFNLSLNWLSTFLGLLMIPSIYWLMPSRFNIFWNSILQTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYFLVTFLLIAQIALLVLESAVAMIQSYVFAVLSTLYSSEVN
SIO_010081: HCS66_mgp12
subclass of: SO_0000673
so part of: HCS66_mgp12
location: 594..1268
location: region:594-1268:1
so has part: feature:594-1268:1:exon

YP_009742597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594-1268:1:exon

HCS66_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: COX3
locus tag: HCS66_mgp11
so part of: sequence
location: 1275..2063
location: region:1275-2063:1
so has part: feature:1275-2063:1:exon
subclass of: SO_0000010

44805023
type: Gene
SIO_000068: ncbigene

position:1275:1
position: 1275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063:1
position: 2063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275-2063:1:exon

HCS66_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: COX3
locus tag: HCS66_mgp11
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit III
translation: MSTHSNHPFHLVDYSPWPLTGAIGAMTTVSGMVKWFHQYDISLFFLGNVITILTVYQWWRDVSREGTYQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIEIGASWPPMGIISFNPFQIPLLNTAILLASGITVTWAHHSLMESNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIADSVYGSTFYMATGFHGVHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIYWWGG
SIO_010081: HCS66_mgp11
subclass of: SO_0000673
so part of: HCS66_mgp11
location: 1275..2063
location: region:1275-2063:1
so has part: feature:1275-2063:1:exon

YP_009742598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1275-2063:1:exon

HCS66_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnG
locus tag: HCS66_mgt03
so part of: sequence
location: 2076..2139
location: region:2076-2139:1
so has part: feature:2076-2139:1:exon
subclass of: SO_0000663

44805024
type: Gene
SIO_000068: ncbigene

position:2076:1
position: 2076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139:1
position: 2139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2076-2139:1:exon

HCS66_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnG
locus tag: HCS66_mgt03
product: tRNA-Gly
SIO_010081: HCS66_mgt03
subclass of: SO_0000673
so part of: HCS66_mgt03
location: 2076..2139
location: region:2076-2139:1
so has part: feature:2076-2139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2076-2139:1:exon

HCS66_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND3
locus tag: HCS66_mgp10
so part of: sequence
location: 2140..2493
location: region:2140-2493:1
so has part: feature:2140-2493:1:exon
subclass of: SO_0000010

44805025
type: Gene
SIO_000068: ncbigene

position:2140:1
position: 2140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493:1
position: 2493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2140-2493:1:exon

HCS66_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND3
locus tag: HCS66_mgp10
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MFSIILIASLILTIVTIVMFLASILSKKALIDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIILKFSNIFIWTFTSIIFILILLIGLYHEWNQGMLNWSN
SIO_010081: HCS66_mgp10
subclass of: SO_0000673
so part of: HCS66_mgp10
location: 2140..2493
location: region:2140-2493:1
so has part: feature:2140-2493:1:exon

YP_009742599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2140-2493:1:exon

HCS66_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnA
locus tag: HCS66_mgt04
so part of: sequence
location: 2496..2559
location: region:2496-2559:1
so has part: feature:2496-2559:1:exon
subclass of: SO_0000663

44805026
type: Gene
SIO_000068: ncbigene

position:2496:1
position: 2496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559:1
position: 2559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496-2559:1:exon

HCS66_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnA
locus tag: HCS66_mgt04
product: tRNA-Ala
SIO_010081: HCS66_mgt04
subclass of: SO_0000673
so part of: HCS66_mgt04
location: 2496..2559
location: region:2496-2559:1
so has part: feature:2496-2559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2496-2559:1:exon

HCS66_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnR
locus tag: HCS66_mgt05
so part of: sequence
location: 2560..2622
location: region:2560-2622:1
so has part: feature:2560-2622:1:exon
subclass of: SO_0000663

44805027
type: Gene
SIO_000068: ncbigene

position:2560:1
position: 2560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622:1
position: 2622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560-2622:1:exon

HCS66_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnR
locus tag: HCS66_mgt05
product: tRNA-Arg
SIO_010081: HCS66_mgt05
subclass of: SO_0000673
so part of: HCS66_mgt05
location: 2560..2622
location: region:2560-2622:1
so has part: feature:2560-2622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2560-2622:1:exon

HCS66_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnN
locus tag: HCS66_mgt06
so part of: sequence
location: 2623..2687
location: region:2623-2687:1
so has part: feature:2623-2687:1:exon
subclass of: SO_0000663

44805028
type: Gene
SIO_000068: ncbigene

position:2623:1
position: 2623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2687:1
position: 2687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2623-2687:1:exon

HCS66_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnN
locus tag: HCS66_mgt06
product: tRNA-Asn
SIO_010081: HCS66_mgt06
subclass of: SO_0000673
so part of: HCS66_mgt06
location: 2623..2687
location: region:2623-2687:1
so has part: feature:2623-2687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2623-2687:1:exon

HCS66_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnS
locus tag: HCS66_mgt07
so part of: sequence
location: 2688..2747
location: region:2688-2747:1
so has part: feature:2688-2747:1:exon
subclass of: SO_0000663

44805029
type: Gene
SIO_000068: ncbigene

position:2688:1
position: 2688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747:1
position: 2747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2688-2747:1:exon

HCS66_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnS
locus tag: HCS66_mgt07
product: tRNA-Ser
SIO_010081: HCS66_mgt07
subclass of: SO_0000673
so part of: HCS66_mgt07
location: 2688..2747
location: region:2688-2747:1
so has part: feature:2688-2747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2688-2747:1:exon

HCS66_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnE
locus tag: HCS66_mgt08
so part of: sequence
location: 2756..2822
location: region:2756-2822:1
so has part: feature:2756-2822:1:exon
subclass of: SO_0000663

44805030
type: Gene
SIO_000068: ncbigene

position:2756:1
position: 2756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822:1
position: 2822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2756-2822:1:exon

HCS66_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnE
locus tag: HCS66_mgt08
product: tRNA-Glu
SIO_010081: HCS66_mgt08
subclass of: SO_0000673
so part of: HCS66_mgt08
location: 2756..2822
location: region:2756-2822:1
so has part: feature:2756-2822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2756-2822:1:exon

HCS66_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnF
locus tag: HCS66_mgt09
so part of: sequence
location: complement(2841..2906)
location: region:2841-2906:-1
so has part: feature:2841-2906:-1:exon
subclass of: SO_0000663

44805031
type: Gene
SIO_000068: ncbigene

position:2841:-1
position: 2841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906:-1
position: 2906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841-2906:-1:exon

HCS66_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnF
locus tag: HCS66_mgt09
product: tRNA-Phe
SIO_010081: HCS66_mgt09
subclass of: SO_0000673
so part of: HCS66_mgt09
location: complement(2841..2906)
location: region:2841-2906:-1
so has part: feature:2841-2906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2841-2906:-1:exon

HCS66_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND5
locus tag: HCS66_mgp09
so part of: sequence
location: complement(2907..4626)
location: region:2907-4626:-1
so has part: feature:2907-4626:-1:exon
subclass of: SO_0000010

44805032
type: Gene
SIO_000068: ncbigene

position:2907:-1
position: 2907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4626:-1
position: 4626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907-4626:-1:exon

HCS66_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND5
locus tag: HCS66_mgp09
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(2907),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MCSISFVNLISISLSCFLLSLYFLLNNMVYFIEFELVSLNSLSIVMTLLFDWMSLLFMSFVLMIASLVIFYSKEYMSSDENINRFIMLVLMFVLSMMMLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYIFYLEVMKNDYEMLMIGFLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLSTSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVMISNINLFSFFLFFFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPYPYMICLPLSMKLLTLFVCIFGGLLGYLISLTNLYSLNKSFIFYNFSTFLGSMWFMPYISTYGMIFYPLNYGQIVVKSFDQGWSEYFGGQHLYQKLVNYSQILFLMHNNSLKIYLMLFVFWILILFNFLLFI
SIO_010081: HCS66_mgp09
subclass of: SO_0000673
so part of: HCS66_mgp09
location: complement(2907..4626)
location: region:2907-4626:-1
so has part: feature:2907-4626:-1:exon

YP_009742600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2907-4626:-1:exon

HCS66_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnH
locus tag: HCS66_mgt10
so part of: sequence
location: complement(4642..4707)
location: region:4642-4707:-1
so has part: feature:4642-4707:-1:exon
subclass of: SO_0000663

44805033
type: Gene
SIO_000068: ncbigene

position:4642:-1
position: 4642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4707:-1
position: 4707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4642-4707:-1:exon

HCS66_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnH
locus tag: HCS66_mgt10
product: tRNA-His
SIO_010081: HCS66_mgt10
subclass of: SO_0000673
so part of: HCS66_mgt10
location: complement(4642..4707)
location: region:4642-4707:-1
so has part: feature:4642-4707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4642-4707:-1:exon

HCS66_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND4
locus tag: HCS66_mgp08
so part of: sequence
location: complement(4708..6048)
location: region:4708-6048:-1
so has part: feature:4708-6048:-1:exon
subclass of: SO_0000010

44805034
type: Gene
SIO_000068: ncbigene

position:4708:-1
position: 4708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048:-1
position: 6048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4708-6048:-1:exon

HCS66_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND4
locus tag: HCS66_mgp08
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MLKLVFFLVFLSPICFINNMYWMVQILLFFISFIFLVMNNFMNYWSEISYFLGSDMLSYGLILLSLWICSLMLLASESVNKYNNYKNLFLLNVILLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYIMNEVNSMNFYLMNNYMFNYDLLYFCMLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLICLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWLTMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMILHWLPLNLLILSSDSCMLWL
SIO_010081: HCS66_mgp08
subclass of: SO_0000673
so part of: HCS66_mgp08
location: complement(4708..6048)
location: region:4708-6048:-1
so has part: feature:4708-6048:-1:exon

YP_009742601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4708-6048:-1:exon

HCS66_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND4L
locus tag: HCS66_mgp07
so part of: sequence
location: complement(6048..6338)
location: region:6048-6338:-1
so has part: feature:6048-6338:-1:exon
subclass of: SO_0000010

44805035
type: Gene
SIO_000068: ncbigene

position:6338:-1
position: 6338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6048-6338:-1:exon

HCS66_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND4L
locus tag: HCS66_mgp07
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MIMILYWSLPMILFIFGLFCFVSNRKHLLSMLLSLEFIVLMLFFMLFIYLNLLNYEIYFSMMFLTFSVCEGALGLSILVSMIRTHGNDYFQSFSIM
SIO_010081: HCS66_mgp07
subclass of: SO_0000673
so part of: HCS66_mgp07
location: complement(6048..6338)
location: region:6048-6338:-1
so has part: feature:6048-6338:-1:exon

YP_009742602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6048-6338:-1:exon

HCS66_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnT
locus tag: HCS66_mgt11
so part of: sequence
location: 6341..6405
location: region:6341-6405:1
so has part: feature:6341-6405:1:exon
subclass of: SO_0000663

44805036
type: Gene
SIO_000068: ncbigene

position:6341:1
position: 6341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6405:1
position: 6405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6341-6405:1:exon

HCS66_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnT
locus tag: HCS66_mgt11
product: tRNA-Thr
SIO_010081: HCS66_mgt11
subclass of: SO_0000673
so part of: HCS66_mgt11
location: 6341..6405
location: region:6341-6405:1
so has part: feature:6341-6405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6341-6405:1:exon

HCS66_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnP
locus tag: HCS66_mgt12
so part of: sequence
location: complement(6406..6471)
location: region:6406-6471:-1
so has part: feature:6406-6471:-1:exon
subclass of: SO_0000663

44805037
type: Gene
SIO_000068: ncbigene

position:6406:-1
position: 6406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6471:-1
position: 6471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6406-6471:-1:exon

HCS66_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnP
locus tag: HCS66_mgt12
product: tRNA-Pro
SIO_010081: HCS66_mgt12
subclass of: SO_0000673
so part of: HCS66_mgt12
location: complement(6406..6471)
location: region:6406-6471:-1
so has part: feature:6406-6471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6406-6471:-1:exon

HCS66_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND6
locus tag: HCS66_mgp06
so part of: sequence
location: 6474..6998
location: region:6474-6998:1
so has part: feature:6474-6998:1:exon
subclass of: SO_0000010

44805038
type: Gene
SIO_000068: ncbigene

position:6474:1
position: 6474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6998:1
position: 6998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6474-6998:1:exon

HCS66_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND6
locus tag: HCS66_mgp06
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MMQLILYSLILTTSIIFLNMIHPLAMGLTLLIQTIFICLISGLMTKSFWYSYILFLIFLGGMLVLFIYVTSLASNEMFNLSIKLTLFSTSILFILFFMSFLIDKSSISFFLINNEMESIFNFNSYFLENSLSLNKLYNFPTNLITILLMNYLLITLIVVVKITKLFKGPLRVMN
SIO_010081: HCS66_mgp06
subclass of: SO_0000673
so part of: HCS66_mgp06
location: 6474..6998
location: region:6474-6998:1
so has part: feature:6474-6998:1:exon

YP_009742603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6474-6998:1:exon

HCS66_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: CYTB
locus tag: HCS66_mgp05
so part of: sequence
location: 7006..8142
location: region:7006-8142:1
so has part: feature:7006-8142:1:exon
subclass of: SO_0000010

44805039
type: Gene
SIO_000068: ncbigene

position:7006:1
position: 7006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8142:1
position: 8142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7006-8142:1:exon

HCS66_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: CYTB
locus tag: HCS66_mgp05
codon start: 1
transl table: 5
product: cytochrome b
translation: MNKPLRTSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADVNMAFYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGMYYGSYLFTPTWLVGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGIDLVQWVWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFLLISLVLINPNLLGDPDNFIPANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFSNLSKFRGIQFYPLNQILFWTMLVTVILLTWIGARPVEEPYVLLGQILTVIYFLYYLINPLVSKWWDNLLN
SIO_010081: HCS66_mgp05
subclass of: SO_0000673
so part of: HCS66_mgp05
location: 7006..8142
location: region:7006-8142:1
so has part: feature:7006-8142:1:exon

YP_009742604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7006-8142:1:exon

HCS66_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnS
locus tag: HCS66_mgt13
so part of: sequence
location: 8145..8210
location: region:8145-8210:1
so has part: feature:8145-8210:1:exon
subclass of: SO_0000663

44805040
type: Gene
SIO_000068: ncbigene

position:8145:1
position: 8145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8210:1
position: 8210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8145-8210:1:exon

HCS66_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnS
locus tag: HCS66_mgt13
product: tRNA-Ser
SIO_010081: HCS66_mgt13
subclass of: SO_0000673
so part of: HCS66_mgt13
location: 8145..8210
location: region:8145-8210:1
so has part: feature:8145-8210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8145-8210:1:exon

HCS66_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND1
locus tag: HCS66_mgp04
so part of: sequence
location: complement(8227..9165)
location: region:8227-9165:-1
so has part: feature:8227-9165:-1:exon
subclass of: SO_0000010

44805041
type: Gene
SIO_000068: ncbigene

position:8227:-1
position: 8227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9165:-1
position: 9165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8227-9165:-1:exon

HCS66_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND1
locus tag: HCS66_mgp04
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MEFILSLIGSLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNMMYFFYYQIYIWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSFL
SIO_010081: HCS66_mgp04
subclass of: SO_0000673
so part of: HCS66_mgp04
location: complement(8227..9165)
location: region:8227-9165:-1
so has part: feature:8227-9165:-1:exon

YP_009742605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8227-9165:-1:exon

HCS66_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnL
locus tag: HCS66_mgt14
so part of: sequence
location: complement(9176..9240)
location: region:9176-9240:-1
so has part: feature:9176-9240:-1:exon
subclass of: SO_0000663

44805042
type: Gene
SIO_000068: ncbigene

position:9176:-1
position: 9176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9240:-1
position: 9240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9176-9240:-1:exon

HCS66_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnL
locus tag: HCS66_mgt14
product: tRNA-Leu
SIO_010081: HCS66_mgt14
subclass of: SO_0000673
so part of: HCS66_mgt14
location: complement(9176..9240)
location: region:9176-9240:-1
so has part: feature:9176-9240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9176-9240:-1:exon

HCS66_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
locus tag: HCS66_mgr02
so part of: sequence
location: complement(9247..10564)
location: region:9247-10564:-1
so has part: feature:9247-10564:-1:exon
subclass of: SO_0000573

44805043
type: Gene
SIO_000068: ncbigene

position:9247:-1
position: 9247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10564:-1
position: 10564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9247-10564:-1:exon

HCS66_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7237
locus tag: HCS66_mgr02
product: 16S ribosomal RNA
SIO_010081: HCS66_mgr02
subclass of: SO_0000673
so part of: HCS66_mgr02
location: complement(9247..10564)
location: region:9247-10564:-1
so has part: feature:9247-10564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9247-10564:-1:exon

HCS66_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnV
locus tag: HCS66_mgt15
so part of: sequence
location: complement(10565..10636)
location: region:10565-10636:-1
so has part: feature:10565-10636:-1:exon
subclass of: SO_0000663

44805053
type: Gene
SIO_000068: ncbigene

position:10565:-1
position: 10565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10636:-1
position: 10636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10565-10636:-1:exon

HCS66_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnV
locus tag: HCS66_mgt15
product: tRNA-Val
SIO_010081: HCS66_mgt15
subclass of: SO_0000673
so part of: HCS66_mgt15
location: complement(10565..10636)
location: region:10565-10636:-1
so has part: feature:10565-10636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10565-10636:-1:exon

HCS66_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
locus tag: HCS66_mgr01
so part of: sequence
location: complement(10637..11410)
location: region:10637-11410:-1
so has part: feature:10637-11410:-1:exon
subclass of: SO_0000573

44805044
type: Gene
SIO_000068: ncbigene

position:10637:-1
position: 10637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11410:-1
position: 11410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10637-11410:-1:exon

HCS66_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7237
locus tag: HCS66_mgr01
product: 12S ribosomal RNA
SIO_010081: HCS66_mgr01
subclass of: SO_0000673
so part of: HCS66_mgr01
location: complement(10637..11410)
location: region:10637-11410:-1
so has part: feature:10637-11410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10637-11410:-1:exon

HCS66_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnI
locus tag: HCS66_mgt16
so part of: sequence
location: 12613..12677
location: region:12613-12677:1
so has part: feature:12613-12677:1:exon
subclass of: SO_0000663

44805054
type: Gene
SIO_000068: ncbigene

position:12613:1
position: 12613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12677:1
position: 12677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12613-12677:1:exon

HCS66_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnI
locus tag: HCS66_mgt16
product: tRNA-Ile
SIO_010081: HCS66_mgt16
subclass of: SO_0000673
so part of: HCS66_mgt16
location: 12613..12677
location: region:12613-12677:1
so has part: feature:12613-12677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12613-12677:1:exon

HCS66_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnQ
locus tag: HCS66_mgt17
so part of: sequence
location: complement(12709..12777)
location: region:12709-12777:-1
so has part: feature:12709-12777:-1:exon
subclass of: SO_0000663

44805045
type: Gene
SIO_000068: ncbigene

position:12709:-1
position: 12709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12777:-1
position: 12777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12709-12777:-1:exon

HCS66_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnQ
locus tag: HCS66_mgt17
product: tRNA-Gln
SIO_010081: HCS66_mgt17
subclass of: SO_0000673
so part of: HCS66_mgt17
location: complement(12709..12777)
location: region:12709-12777:-1
so has part: feature:12709-12777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12709-12777:-1:exon

HCS66_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnM
locus tag: HCS66_mgt18
so part of: sequence
location: 12802..12872
location: region:12802-12872:1
so has part: feature:12802-12872:1:exon
subclass of: SO_0000663

44805046
type: Gene
SIO_000068: ncbigene

position:12802:1
position: 12802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12872:1
position: 12872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12802-12872:1:exon

HCS66_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnM
locus tag: HCS66_mgt18
product: tRNA-Met
SIO_010081: HCS66_mgt18
subclass of: SO_0000673
so part of: HCS66_mgt18
location: 12802..12872
location: region:12802-12872:1
so has part: feature:12802-12872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12802-12872:1:exon

HCS66_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: ND2
locus tag: HCS66_mgp03
so part of: sequence
location: 12872..13895
location: region:12872-13895:1
so has part: feature:12872-13895:1:exon
subclass of: SO_0000010

44805047
type: Gene
SIO_000068: ncbigene

position:13895:1
position: 13895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12872-13895:1:exon

HCS66_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: ND2
locus tag: HCS66_mgp03
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:13895,aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MFNNSSKILFLTIMIIGTMITVTSNSWLGAWMGLEINLLSFIPLLSDNNNLTSTEASLKYFLTQALASTVLLFSSIILMLKNNMNIEINESFTSMIIMSALLLKMGAAPFHFWFPNMMEGLTWMNALMLMTWQKIAPLMLISYLNIKNLLLISVILSVIVGAIGGLNQTSLRKLMAFSSINHLGWMLMSLMISESVWLIYFMFYSFLSFILTFMFNIFKLFHLNQLFSWFMNSKVLKFTLFMNFLSLGGLPPFLGFLPKWLVIQELTFCNQYFTLTIMMMSTLITLFFYLRICYSAFMLNYYENNWTINTQFNNMNTNLYLICTFFSIFGLFLISLFFFML
SIO_010081: HCS66_mgp03
subclass of: SO_0000673
so part of: HCS66_mgp03
location: 12872..13895
location: region:12872-13895:1
so has part: feature:12872-13895:1:exon

YP_009742606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12872-13895:1:exon

HCS66_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnW
locus tag: HCS66_mgt19
so part of: sequence
location: 13895..13962
location: region:13895-13962:1
so has part: feature:13895-13962:1:exon
subclass of: SO_0000663

44805048
type: Gene
SIO_000068: ncbigene

position:13962:1
position: 13962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13895-13962:1:exon

HCS66_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnW
locus tag: HCS66_mgt19
product: tRNA-Trp
SIO_010081: HCS66_mgt19
subclass of: SO_0000673
so part of: HCS66_mgt19
location: 13895..13962
location: region:13895-13962:1
so has part: feature:13895-13962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13895-13962:1:exon

HCS66_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnC
locus tag: HCS66_mgt20
so part of: sequence
location: complement(13954..14016)
location: region:13954-14016:-1
so has part: feature:13954-14016:-1:exon
subclass of: SO_0000663

44805049
type: Gene
SIO_000068: ncbigene

position:13954:-1
position: 13954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14016:-1
position: 14016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13954-14016:-1:exon

HCS66_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnC
locus tag: HCS66_mgt20
product: tRNA-Cys
SIO_010081: HCS66_mgt20
subclass of: SO_0000673
so part of: HCS66_mgt20
location: complement(13954..14016)
location: region:13954-14016:-1
so has part: feature:13954-14016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13954-14016:-1:exon

HCS66_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnY
locus tag: HCS66_mgt21
so part of: sequence
location: complement(14020..14085)
location: region:14020-14085:-1
so has part: feature:14020-14085:-1:exon
subclass of: SO_0000663

44805050
type: Gene
SIO_000068: ncbigene

position:14020:-1
position: 14020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14085:-1
position: 14085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14020-14085:-1:exon

HCS66_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnY
locus tag: HCS66_mgt21
product: tRNA-Tyr
SIO_010081: HCS66_mgt21
subclass of: SO_0000673
so part of: HCS66_mgt21
location: complement(14020..14085)
location: region:14020-14085:-1
so has part: feature:14020-14085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14020-14085:-1:exon

HCS66_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: COX1
locus tag: HCS66_mgp02
so part of: sequence
location: <14084..15619
location: region:14084-15619:1
so has part: feature:14084-15619:1:exon
subclass of: SO_0000010

44805051
type: Gene
SIO_000068: ncbigene

position:14084:1
position: 14084
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:15619:1
position: 15619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14084-15619:1:exon

HCS66_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7237
gene: COX1
locus tag: HCS66_mgp02
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit I
translation: SRQWLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPPLSSGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSSGITLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGAQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGLTMNNKLLKSQFVIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNVVSTIGSSISLLGILFFFYIIWESLVSQRQVIYPIQLCSSIEWYQNTPPAEHSYSELPLLTN
SIO_010081: HCS66_mgp02
subclass of: SO_0000673
so part of: HCS66_mgp02
location: <14084..15619
location: region:14084-15619:1
so has part: feature:14084-15619:1:exon

YP_009742607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14084-15619:1:exon

HCS66_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 7237
gene: trnL
locus tag: HCS66_mgt22
so part of: sequence
location: 15621..15688
location: region:15621-15688:1
so has part: feature:15621-15688:1:exon
subclass of: SO_0000663

44805052
type: Gene
SIO_000068: ncbigene

position:15621:1
position: 15621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15688:1
position: 15688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15621-15688:1:exon

HCS66_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7237
gene: trnL
locus tag: HCS66_mgt22
product: tRNA-Leu
SIO_010081: HCS66_mgt22
subclass of: SO_0000673
so part of: HCS66_mgt22
location: 15621..15688
location: region:15621-15688:1
so has part: feature:15621-15688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15621-15688:1:exon