Culex quinquefasciatus mitochondrion, complete genome.
type: Entry
definition: Culex quinquefasciatus mitochondrion, complete genome.
sequence version: NC_014574.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_014574.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Culex quinquefasciatus (southern house mosquito)
organism: Culex quinquefasciatus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex.
reference: 1
references: 21640823
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to GU188856.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 15587
topology: circular
so has quality: SO_0000988
location: 1..15587
location: region:1-15587:1
RO_0002162: 7176

NC_014574
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete sequences of mitochondria genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes
author: Behura, S.K.
author: Lobo, N.F.
author: Haas, B.
author: Debruyn, B.
author: Lovin, D.D.
author: Shumway, M.F.
author: Puiu, D.
author: Romero-Severson, J.
author: Nene, V.
author: Severson, D.W.
journal: Insect Biochem. Mol. Biol.
volume: 41
issue: 10
pages: 770-777
year: 2011
pubmed: 21640823

21640823
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (15-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Behura, S.K.
author: Severson, D.W.
journal: Submitted (11-NOV-2009) Eck Institute for Global Health, Department of Biological Sciences, University of Notre Dame, Galvin Life Science Building, Notre Dame, IN 46556, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15587:1
position: 15587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15587:1:source
so part of: sequence
organism: Culex quinquefasciatus
organelle: mitochondrion
mol type: genomic DNA

7176
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Ile
so part of: sequence
location: 2..69
location: region:2-69:1
so has part: feature:2-69:1:region

position:2:1
position: 2
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2-69:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Gln
so part of: sequence
location: complement(70..138)
location: region:70-138:-1
so has part: feature:70-138:-1:region

position:70:-1
position: 70
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138:-1
position: 138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-138:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Met
so part of: sequence
location: 142..210
location: region:142-210:1
so has part: feature:142-210:1:region

position:142:1
position: 142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210:1
position: 210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142-210:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND2
so part of: sequence
location: 211..1233
location: region:211-1233:1
so has part: feature:211-1233:1:exon
subclass of: SO_0000010

9829916
type: Gene
SIO_000068: ncbigene

position:211:1
position: 211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233:1
position: 1233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211-1233:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND2
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MKKISNNIFLIMLIFGSLITISANSWLGAWMGLEINLLSFIPLMNEGKKNLMTSESSLKYFLTQAFASSILLFAIILMMMSFNLNWMNNNFYELLILSTLLLKNGAAPFHFWFPGVMEGLSWINGLILMTWQKIAPLMLISYNINYNFFFIAIILSMIIGALGGLNQTSLRKLMAFSSINHLGWMLMAMMNNELLWLIYFVFYFFLSMSIVLLFNNLKLFHFNQIFNFSMMNPVIKFFLFLNLLSLGGLPPFLGFLPKWLVIQNLVETNQLFLLFISVCLTLITLYYYLRMSYSIYMLNFNKNSWMLMNNFSNKNMTFILTMNFFSIMGLMIISLIYLIL
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 211..1233
location: region:211-1233:1
so has part: feature:211-1233:1:exon

YP_003934122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211-1233:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Trp
so part of: sequence
location: 1235..1303
location: region:1235-1303:1
so has part: feature:1235-1303:1:region

position:1235:1
position: 1235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303:1
position: 1303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235-1303:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Cys
so part of: sequence
location: complement(1304..1369)
location: region:1304-1369:-1
so has part: feature:1304-1369:-1:region

position:1304:-1
position: 1304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369:-1
position: 1369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304-1369:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Tyr
so part of: sequence
location: complement(1382..1447)
location: region:1382-1447:-1
so has part: feature:1382-1447:-1:region

position:1382:-1
position: 1382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447:-1
position: 1447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382-1447:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: COX1
so part of: sequence
location: <1446..2982
location: region:1446-2982:1
so has part: feature:1446-2982:1:exon
subclass of: SO_0000010

9829904
type: Gene
SIO_000068: ncbigene

position:1446:1
position: 1446
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2982:1
position: 2982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446-2982:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: COX1
note: start codon not determined; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:2982,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit I
translation: SRQWLFSTNHKDIGTLYFIFGAWAGMVGTSLSLLIRAELSQPGVFIGNDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSLVENGAGTGWTVYPPLSSGTAHAGASVDLAIFSLHLAGISSILGAVNFITTVINMRSSGITLDRMPLFVWSVVITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIITQESGKKETFGTLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLNYTPALLWSLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWYPLLTGLVMNPTWLKIQFTIMFIGVNLTFFPQHFLGLAGMPRRYSDFPDSYLAWNIVSSLGSTISLFGIVFFLFIIWESMISQRTPSFPMQLSSSIEWYHTLPPAEHTYAELPLLSSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: <1446..2982
location: region:1446-2982:1
so has part: feature:1446-2982:1:exon

YP_003934123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1446-2982:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2983..3049
location: region:2983-3049:1
so has part: feature:2983-3049:1:region

position:2983:1
position: 2983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049:1
position: 3049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2983-3049:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: COX2
so part of: sequence
location: 3055..3739
location: region:3055-3739:1
so has part: feature:3055-3739:1:exon
subclass of: SO_0000010

9829905
type: Gene
SIO_000068: ncbigene

position:3055:1
position: 3055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739:1
position: 3739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055-3739:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3739,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit II
translation: MATWANLGLQNSSSPLMEQLNFFHDHTVLILIMITVMITYVMGMLFFNKFTNRYLLHGQTIEIIWTILPTIILMFIAFPSLRLLYLLDEINSPLITLKAIGHQWYWSYEYSNFMNLEFDSYMIPTNELDLNGFRLLDVDNRIILPLNNQIRILVTATDVLHSWTVPSLGVKIDATPGRLNQTNFLINQSGLFFGQCSEICGANHSFMPIVIESIPMNYFIKWVSSQLN
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 3055..3739
location: region:3055-3739:1
so has part: feature:3055-3739:1:exon

YP_003934124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3055-3739:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Lys
so part of: sequence
location: 3740..3810
location: region:3740-3810:1
so has part: feature:3740-3810:1:region

position:3740:1
position: 3740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3810:1
position: 3810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3740-3810:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Asp
so part of: sequence
location: 3821..3888
location: region:3821-3888:1
so has part: feature:3821-3888:1:region

position:3821:1
position: 3821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3888:1
position: 3888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3821-3888:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ATP8
so part of: sequence
location: 3898..4050
location: region:3898-4050:1
so has part: feature:3898-4050:1:exon
subclass of: SO_0000010

9829906
type: Gene
SIO_000068: ncbigene

position:3898:1
position: 3898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050:1
position: 4050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3898-4050:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ATP8
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MAPISWLTLFLVFSITLVVFNVKNYFCVSYSSNQTAQNINIKSFKMNWKW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 3898..4050
location: region:3898-4050:1
so has part: feature:3898-4050:1:exon

YP_003934125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3898-4050:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ATP6
so part of: sequence
location: 4044..4724
location: region:4044-4724:1
so has part: feature:4044-4724:1:exon
subclass of: SO_0000010

9829907
type: Gene
SIO_000068: ncbigene

position:4044:1
position: 4044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4724:1
position: 4724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044-4724:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ATP6
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MMTNLFSVFDPSTTIFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMFISLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVTQIALLVLESAVASLESYVFAVLSTLYSSEVN
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 4044..4724
location: region:4044-4724:1
so has part: feature:4044-4724:1:exon

YP_003934126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4044-4724:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: COX3
so part of: sequence
location: 4728..5515
location: region:4728-5515:1
so has part: feature:4728-5515:1:exon
subclass of: SO_0000010

9829908
type: Gene
SIO_000068: ncbigene

position:4728:1
position: 4728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5515:1
position: 5515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4728-5515:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5514..5515,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit III
translation: MSTHANHPFHLVDYSPWPLTGAIGAMTTVTGLVQWFHQYDNTLFLLGNIITMLTMYQWWRDISREGTFQGLHTIPVTLGLRWGMILFIISEVFFFISFFWAFFHSSLSPTIELGMVWPPIGIEPFNPFQIPLLNTAILLASGVTVTWAHHSLMENNHTQTIQSLFFTVLLGIYFSILQAYEYIEAPFTIADNVYGSTFFVATGFHGLHVLIGTSFLLICLFRHMNCHFSSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGN
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 4728..5515
location: region:4728-5515:1
so has part: feature:4728-5515:1:exon

YP_003934127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4728-5515:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Gly
so part of: sequence
location: 5516..5582
location: region:5516-5582:1
so has part: feature:5516-5582:1:region

position:5516:1
position: 5516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5582:1
position: 5582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5516-5582:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND3
so part of: sequence
location: 5580..5934
location: region:5580-5934:1
so has part: feature:5580-5934:1:exon
subclass of: SO_0000010

9829909
type: Gene
SIO_000068: ncbigene

position:5580:1
position: 5580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5934:1
position: 5934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5580-5934:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5934,aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MIIMLFLMSIIIFTITIIVMLLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSSNLLNWSITSLFFIFILLIGLYHEWNQGALEWNN
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 5580..5934
location: region:5580-5934:1
so has part: feature:5580-5934:1:exon

YP_003934128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5580-5934:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Arg
so part of: sequence
location: 5935..5998
location: region:5935-5998:1
so has part: feature:5935-5998:1:region

position:5935:1
position: 5935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5998:1
position: 5998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5935-5998:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Ala
so part of: sequence
location: 5999..6064
location: region:5999-6064:1
so has part: feature:5999-6064:1:region

position:5999:1
position: 5999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6064:1
position: 6064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999-6064:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Asn
so part of: sequence
location: 6065..6131
location: region:6065-6131:1
so has part: feature:6065-6131:1:region

position:6065:1
position: 6065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6131:1
position: 6131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6065-6131:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Ser
so part of: sequence
location: 6130..6194
location: region:6130-6194:1
so has part: feature:6130-6194:1:region

position:6130:1
position: 6130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6194:1
position: 6194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6130-6194:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Glu
so part of: sequence
location: 6202..6267
location: region:6202-6267:1
so has part: feature:6202-6267:1:region

position:6202:1
position: 6202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6267:1
position: 6267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6202-6267:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Phe
so part of: sequence
location: complement(6266..6332)
location: region:6266-6332:-1
so has part: feature:6266-6332:-1:region

position:6266:-1
position: 6266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6332:-1
position: 6332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6266-6332:-1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND5
so part of: sequence
location: complement(6333..8078)
location: region:6333-8078:-1
so has part: feature:6333-8078:-1:exon
subclass of: SO_0000010

9829910
type: Gene
SIO_000068: ncbigene

position:6333:-1
position: 6333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8078:-1
position: 8078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6333-8078:-1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND5
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MVNYLVNYCKNSFYILIFISFTLFILSLKFLLMDLVYFIEWEIVSLHSMSIVMTFLFDWMSLMFMSFVLLISSLVIFYSDQYMGEDYNVNRFILLVLMFVMSMMMLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYIFYLDMMKNNFEMMVIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLDNSKLGQFLLLVSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSIGYYKLAFFHLLTHALFKALLFMCAGVIIHNTKNPQSVRFMGSLSMSMPLTCSCFNIANLALCGMPFLAGFYSKDLILEVVMLSYINFFSFFLFFFSTGLTVCYSFRLVYYSMTGDFNMTSLNMLNDKGWTMSFSIFFLMVMAIIGGSMLNWLMFFNPDMICLPFDMKMLTLIVCILGGVSGYLMSNISLFFYNKSLMNYGLSSFAGGMWFMPVISTLGVIKFSMNLGLYSYKSFDQGWSEFFGGQMLYNQLKNYSLYIQEFQNNNLKIYLLSYLLWVIVLVLMSMFLI
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: complement(6333..8078)
location: region:6333-8078:-1
so has part: feature:6333-8078:-1:exon

YP_003934129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6333-8078:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-His
so part of: sequence
location: complement(8076..8141)
location: region:8076-8141:-1
so has part: feature:8076-8141:-1:region

position:8076:-1
position: 8076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8141:-1
position: 8141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8076-8141:-1:region

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND4
so part of: sequence
location: complement(8142..9484)
location: region:8142-9484:-1
so has part: feature:8142-9484:-1:exon
subclass of: SO_0000010

9829911
type: Gene
SIO_000068: ncbigene

position:8142:-1
position: 8142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9484:-1
position: 9484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8142-9484:-1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(8142..8143),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MLKFIFMILFMNVFMFYKNIYWMVQNLLFLGAFLFMIKISSMYYFCNISYYFGMDMVSYGLILLSFWICALMLMASESVVRLNNYTNLFLFMILFLLLMLILTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYIKNNDFTMNIILLNYCKLYNLEFLYLCMVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRVFSLLQIMGMKFNFIWISISLIGGVLVSLICLRQMDLKALIAYSSVAHMGIVLSGLLTMTYWGLSGSYTLMLAHGLCSSGLFCLANISYERMGSRSLLINKGMLNFMPSMALWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWLTMISLALLSFFSAAYTLYLFAYSQHGKVYSGTYFFSSGVSREYLLLMLHWMPLNLLIMKSNFCMLWI
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: complement(8142..9484)
location: region:8142-9484:-1
so has part: feature:8142-9484:-1:exon

YP_003934130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8142-9484:-1:exon

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND4L
so part of: sequence
location: complement(9478..9774)
location: region:9478-9774:-1
so has part: feature:9478-9774:-1:exon
subclass of: SO_0000010

9829912
type: Gene
SIO_000068: ncbigene

position:9478:-1
position: 9478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9774:-1
position: 9774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9478-9774:-1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND4L
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MSNFLLYYFMIVMFMFGCIVFISTRKHLLCTLLSLEFMVLMLFMLLFFMLNFMNYEGYFSMFFLTFCVCEGVLGLSILVSMIRTHGNDYFQSFSILQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: complement(9478..9774)
location: region:9478-9774:-1
so has part: feature:9478-9774:-1:exon

YP_003934131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9478-9774:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Thr
so part of: sequence
location: 9780..9844
location: region:9780-9844:1
so has part: feature:9780-9844:1:region

position:9780:1
position: 9780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9844:1
position: 9844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9780-9844:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Pro
so part of: sequence
location: complement(9845..9910)
location: region:9845-9910:-1
so has part: feature:9845-9910:-1:region

position:9845:-1
position: 9845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9910:-1
position: 9910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9845-9910:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND6
so part of: sequence
location: 9916..10431
location: region:9916-10431:1
so has part: feature:9916-10431:1:exon
subclass of: SO_0000010

9829913
type: Gene
SIO_000068: ncbigene

position:9916:1
position: 9916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10431:1
position: 10431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9916-10431:1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND6
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MMIMFLCFITSFIFMQMKHPLAMGLMLLIQTFLTCLMTGIYAKTFWFSYVLFLIFMGGMLVLFIYVTSLSSNEMFSMSFKLSFISIMMIFLFIMISYFFDNSMMENFIKNNDSIQLFNQNNLFYENFLSLNKMYNFPTNLITLLLINYLFLTLLVTVKITKKNYGPLRPMN
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: 9916..10431
location: region:9916-10431:1
so has part: feature:9916-10431:1:exon

YP_003934132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9916-10431:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: CYTB
so part of: sequence
location: 10431..11565
location: region:10431-11565:1
so has part: feature:10431-11565:1:exon
subclass of: SO_0000010

9829914
type: Gene
SIO_000068: ncbigene

position:11565:1
position: 11565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10431-11565:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11565,aa:TERM)
transl table: 5
product: cytochrome b
translation: MNKPLRKSHPLISIANNALVDLPAPSNISAWWNFGSLLGLCLVIQILTGLFLAMHYTADIETAFNSVNHIYRDVNNGWFLRICHANGASFFFACLFIHVGRGVYYNSYLYIPTWMIGVIILFMVMATGFLGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWIWGGFAVDNATLTRFFTFHFILPFIVLALTMIHLLFLHQTGSNNPLGLNSNVDKIPFHPYFVYKDIVGFIIFMWILIGFIWKFNYLLMDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFTHTSKFRGLQFYPLNQILFWNMVIVASLLTWIGARPVEDPYVLTGQILTVLYFSYFIINPLMSKYWDKLLN
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 10431..11565
location: region:10431-11565:1
so has part: feature:10431-11565:1:exon

YP_003934133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10431-11565:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Ser
so part of: sequence
location: 11566..11634
location: region:11566-11634:1
so has part: feature:11566-11634:1:region

position:11566:1
position: 11566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11634:1
position: 11634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11566-11634:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 7176
gene: ND1
so part of: sequence
location: complement(11653..12649)
location: region:11653-12649:-1
so has part: feature:11653-12649:-1:exon
subclass of: SO_0000010

9829915
type: Gene
SIO_000068: ncbigene

position:11653:-1
position: 11653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12649:-1
position: 12649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11653-12649:-1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7176
gene: ND1
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MVLFYMDYLLSLIGSLLLVICVMVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAVKLFTKEQTYPLLSNYIFYYFSPIFSLFLSLLIWMSMPYLIKLYSFNLGVLFFLCITSLGVYTVMVAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGNYNFLNFFMYQKYMWFIVFCFPLGLVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFSVIFLGSDIYSILFFFKLTIISFFFIWVRGTLPRFRYDKLMYLAWKSFLPMSLNYLFFFIGVKIFILSMLF
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: complement(11653..12609)
location: region:11653-12609:-1
so has part: feature:11653-12609:-1:exon

YP_003934134.1
type: Protein
SIO_000068: ncbiprotein

position:12609:-1
position: 12609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11653-12609:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: complement(12606..12671)
location: region:12606-12671:-1
so has part: feature:12606-12671:-1:region

position:12606:-1
position: 12606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12671:-1
position: 12671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12606-12671:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7176
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: complement(12675..14007)
location: region:12675-14007:-1
so has part: feature:12675-14007:-1:region

position:12675:-1
position: 12675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14007:-1
position: 14007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12675-14007:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7176
product: tRNA-Val
so part of: sequence
location: complement(14008..14079)
location: region:14008-14079:-1
so has part: feature:14008-14079:-1:region

position:14008:-1
position: 14008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14079:-1
position: 14079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14008-14079:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7176
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: complement(14080..14883)
location: region:14080-14883:-1
so has part: feature:14080-14883:-1:region

position:14080:-1
position: 14080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14883:-1
position: 14883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14080-14883:-1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7176
note: control region
so part of: sequence
location: 14884..15587
location: region:14884-15587:1
so has part: feature:14884-15587:1:region

position:14884:1
position: 14884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14884-15587:1:region