Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence.
type: Entry
definition: Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence.
sequence version: NZ_CP023069.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_CP023069.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07445560
keyword: RefSeq
source: Ensifer sojae CCBAU 05684
organism: Ensifer sojae CCBAU 05684
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP023069.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT Analysis v. 2.3.0\nGenome Coverage :: 130x\nSequencing Technology :: PacBio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 04:01:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,768\nCDSs (total) :: 5,703\nGenes (coding) :: 5,453\nCDSs (with protein) :: 5,453\nGenes (RNA) :: 65\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 250\nCDSs (without protein) :: 250\nPseudo Genes (ambiguous residues) :: 0 of 250\nPseudo Genes (frameshifted) :: 126 of 250\nPseudo Genes (incomplete) :: 182 of 250\nPseudo Genes (internal stop) :: 21 of 250\nPseudo Genes (multiple problems) :: 72 of 250\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 410255
topology: circular
so has quality: SO_0000988
location: 1..410255
location: region:1-410255:1
RO_0002162: 716928

NZ_CP023069
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07445560
type: BioSample
SIO_000068: biosample

1
title: Multipartite genome sequences of Sinorhizobium species nodulating soybeans
author: Tian, C.F.
journal: Unpublished

2
title: Direct Submission
author: Tian, C.F.
journal: Submitted (29-AUG-2017) College of Biological Sciences, China Agricultural University, Yuanmingyuan Western Road No. 2, Haidian District, Beijing, Beijing 100193, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410255:1
position: 410255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-410255:1:source
so part of: sequence
organism: Ensifer sojae CCBAU 05684
mol type: genomic DNA
strain: CCBAU 05684
host: G.max
type material: type strain of Ensifer sojae
plasmid: pSJ05684a
country: China: Huanghua
collection date: 2008-07

716928
type: Taxonomy
SIO_000068: taxonomy

SJ05684_RS27140
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: repA
locus tag: SJ05684_RS27140
old locus tag: SJ05684_a37060
so part of: sequence
location: 1..1224
location: region:1-1224:1
so has part: feature:1-1224:1:exon
subclass of: SO_0000010

position:1224:1
position: 1224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1224:1:exon

SJ05684_RS27140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: repA
locus tag: SJ05684_RS27140
old locus tag: SJ05684_a37060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MNANSPPIAPAQPMHFEDLILEQGDLISKKLHLLSMQQFPPNAKKLLRQFSLSEVAQFLGVSQSTLKKLHLEGKGPLPQTSSSGRRSYSAEQMAELRQYLDQHGRSEARNYVPHRRSGEKLQVIAVVNFKGGSGKTTTAAHLAQYMALTGHRVLAVDLDPQASLSSLHGFQPELDLSPSLYEALRYDDQRRSISEIIQPTNFPGLDIVPANLELQEYEYDTPLAMSNKSSNDGKTFFTRISRALSEVNDRYDVVVIDCPPQLGYLTITALTAATSVLITIHPQMLDVMSMGQFLLMLGGILKPIRDVGAAVNLEWYRYLITRYEPTDGPQAQMVGFMQTLFHQFVLKNQMLKSTAVSDAGITKQTLYEVDKSQMTRSTYERAMDSLNAVNAEIAELVHASWGRKVVS
SIO_010081: SJ05684_RS27140
subclass of: SO_0000673
so part of: SJ05684_RS27140
location: 1..1224
location: region:1-1224:1
so has part: feature:1-1224:1:exon

WP_014858029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1224:1:exon

SJ05684_RS27145
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: repB
locus tag: SJ05684_RS27145
old locus tag: SJ05684_a37070
so part of: sequence
location: 1282..2262
location: region:1282-2262:1
so has part: feature:1282-2262:1:exon
subclass of: SO_0000010

position:1282:1
position: 1282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262:1
position: 2262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282-2262:1:exon

SJ05684_RS27145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: repB
locus tag: SJ05684_RS27145
old locus tag: SJ05684_a37070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858028.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPETLDGSFVSDRMGDSSEQFEELKQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARELGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFASHLEKLGYDRTIIGSALAANAAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEEKVKAIVSDPSFNELSTDDRFNALFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAGPFGRYIADNLDRLYAEFLEQGNRKED
SIO_010081: SJ05684_RS27145
subclass of: SO_0000673
so part of: SJ05684_RS27145
location: 1282..2262
location: region:1282-2262:1
so has part: feature:1282-2262:1:exon

WP_014858028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282-2262:1:exon

SJ05684_RS27150
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: repC
locus tag: SJ05684_RS27150
old locus tag: SJ05684_a37080
so part of: sequence
location: 2417..3631
location: region:2417-3631:1
so has part: feature:2417-3631:1:exon
subclass of: SO_0000010

position:2417:1
position: 2417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631:1
position: 3631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2417-3631:1:exon

SJ05684_RS27150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: repC
locus tag: SJ05684_RS27150
old locus tag: SJ05684_a37080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MQDGSVTTPFGRRSMTLGMLASQYMSRELEPETSADKWKLFRALCEAKPKLGISERALSVMNALLSFYPETTLSEENGLIVFPSNMQLSLRAHGMAEATLRRHIAALVDAGLLARRDSPNGKRYARKDGDGSIDEAYGFSLAPLLSRAREIEQIAADVKIERLQLRRLRERLTICRRDIGKLIEVAIEEGVDGNWDGIHQHYRSLVATIPRVATAATVAPILEEMEMLREEISNLLEIRLKIENLSGNPDQIERHKQNSHPESTNELEPRSLEEQGERPSPAIEPQREPMKVFPLGMVLRACPSISDYGPGGVVASPRDLMQAAVVVRSMLCVSPSAYQDACEVMGPENASAVMACILERSGHIKSPGGYLRDLTSRAKRGEFSPGPVLMALLRARGGSDRLAS
SIO_010081: SJ05684_RS27150
subclass of: SO_0000673
so part of: SJ05684_RS27150
location: 2417..3631
location: region:2417-3631:1
so has part: feature:2417-3631:1:exon

WP_014858027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2417-3631:1:exon

SJ05684_RS30735
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30735
pseudo: true
so part of: sequence
location: <5011..>5360
location: region:5011-5360:1
so has part: feature:5011-5360:1:exon
subclass of: SO_0000010

position:5011:1
position: 5011
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5360:1
position: 5360
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5011-5360:1:exon

SJ05684_RS30735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017275348.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SJ05684_RS30735
subclass of: SO_0000673
so part of: SJ05684_RS30735
location: <5011..>5360
location: region:5011-5360:1
so has part: feature:5011-5360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5011-5360:1:exon

SJ05684_RS27165
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27165
old locus tag: SJ05684_a37120
so part of: sequence
location: 6353..6559
location: region:6353-6559:1
so has part: feature:6353-6559:1:exon
subclass of: SO_0000010

position:6353:1
position: 6353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559:1
position: 6559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6353-6559:1:exon

SJ05684_RS27165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27165
old locus tag: SJ05684_a37120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014332786.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSGKMSADNLQA
SIO_010081: SJ05684_RS27165
subclass of: SO_0000673
so part of: SJ05684_RS27165
location: 6353..6559
location: region:6353-6559:1
so has part: feature:6353-6559:1:exon

WP_034859522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353-6559:1:exon

SJ05684_RS27170
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27170
old locus tag: SJ05684_a37130
so part of: sequence
location: complement(6707..7624)
location: region:6707-7624:-1
so has part: feature:6707-7624:-1:exon
subclass of: SO_0000010

position:6707:-1
position: 6707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7624:-1
position: 7624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6707-7624:-1:exon

SJ05684_RS27170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27170
old locus tag: SJ05684_a37130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875050.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MATAANLNSPSLQQRLIGYARVSTEDQLNDAQVDELRAAGCHRIHQEHGSGASRARPVLAKLLKDLATGDVLVVVRLDRLARSVSHLLDVIEDLEKRGVHFRSLRDPIDTSTPQGMFSLQVLGAVAQLERALIAERTKSGMQAAKARGRLAGNPGLRERRPEAIRAVSAARERAYLDELIVSAQTWLPTVRRLRPRHSWDNVVRILNRGGHDWTVERLRRAVHRLVREKLAEPELLARSPRRPPEDHLMRLVAGIAIADPDLSLRDIAAQLDQMQERPPRGGRKWQPSSVRALLDEASRIGLVRS
SIO_010081: SJ05684_RS27170
subclass of: SO_0000673
so part of: SJ05684_RS27170
location: complement(6707..7624)
location: region:6707-7624:-1
so has part: feature:6707-7624:-1:exon

WP_015633599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6707-7624:-1:exon

SJ05684_RS27175
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27175
old locus tag: SJ05684_a37140
so part of: sequence
location: complement(8635..9219)
location: region:8635-9219:-1
so has part: feature:8635-9219:-1:exon
subclass of: SO_0000010

position:8635:-1
position: 8635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9219:-1
position: 9219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8635-9219:-1:exon

SJ05684_RS27175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27175
old locus tag: SJ05684_a37140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEFRALVKRQIVALLEKLHHSDDDESFVFRDDRATEDDLRNWLSARMREIGSSHYEVIREQEVAVENRPDLRVHSRNPEFGLISVEIKLADADHWNGNTLVNKIETQLANQYMHENGSHTGFYLLANAAKPLKKEIDSKTGKVKRRAFAKKVAGKNVNFAGLLTLCDARAAAVTAGLGGNKLIDVIAVDLSER
SIO_010081: SJ05684_RS27175
subclass of: SO_0000673
so part of: SJ05684_RS27175
location: complement(8635..9219)
location: region:8635-9219:-1
so has part: feature:8635-9219:-1:exon

WP_244426738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8635-9219:-1:exon

SJ05684_RS27180
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27180
old locus tag: SJ05684_a37150
so part of: sequence
location: complement(9527..10444)
location: region:9527-10444:-1
so has part: feature:9527-10444:-1:exon
subclass of: SO_0000010

position:9527:-1
position: 9527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10444:-1
position: 10444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9527-10444:-1:exon

SJ05684_RS27180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27180
old locus tag: SJ05684_a37150
function: Type II secretory pathway, component ExeA (predicted ATPase)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLADVQSSYGLDRPFQGAGNFETEHQRTIIREVCAAVQTGRLVVVSGLVGSGKTHLLRRIEAELTKAGKVALAKSLAVDKRRTSLPSLIEALFYDLSPGDRAQVKIPKQAERRERDLRDIMKKGKRPVVLVVDEAHDLHHKTLTGLKRLMEVVADAGVLLSVLLVGHPRLRNDLRRPQMEEIGYRTTIFDYEGIGSARRDYVAWLLGACAAEGVKVGELLEEDAIDLIAERLRTPLQIEMHLTLAFEQGFRLGAKPVTAEIVEQILSRAIDDLEPTLTRNGYDAAALVTHLNARPSDIRAFLAGN
SIO_010081: SJ05684_RS27180
subclass of: SO_0000673
so part of: SJ05684_RS27180
location: complement(9527..10444)
location: region:9527-10444:-1
so has part: feature:9527-10444:-1:exon

WP_014330219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9527-10444:-1:exon

SJ05684_RS27185
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27185
old locus tag: SJ05684_a37160
so part of: sequence
location: complement(10444..12096)
location: region:10444-12096:-1
so has part: feature:10444-12096:-1:exon
subclass of: SO_0000010

position:12096:-1
position: 12096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10444-12096:-1:exon

SJ05684_RS27185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27185
old locus tag: SJ05684_a37160
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS481 family transposase
translation: MAERRKRPPGEALVDIRRRLSLLSPRDPGRTEIVARAADAYGFSIWTIYRALRELNRPKSVRRADHGTSRIAPQPEMETYAEIIAALKIRTANRKGRHISTARAIKLLEDDGVETPDGLVRAPPGLLKRATVDRLLHVCGLDYRRVTRPVAAVRFQARRSNELWHFDMSPSDLKQVEAPLWVEEGRGRPILMLFSVVDDRSGASYQEYRCVYGEDAESALRFLYNAFATKPEPELPLQGIPTTIHMDNGPVSRSRVFQSVMGSLGVRVLTHMPPSDSERRTPARAKGKVERPFRTIKEVHETLYHFHKPKDEEEANLWFRRALITYNNGEHRTESHARIEDWLRHLSPDGVRAMCSWERFCAFAREPERRTVAGDATVSVEGASYEVEPELAGETVTLLWGLFDQELFVEYEGKRFGPFQPSRGAVPLFRYRKYQKSKIEERLDKVVRLADKLGLPRAAVTGGDRPLPSLPPTAAGLSVRRTPFPEPAIETAYGSGLAARGAIADQLGRPIGAMNPSDRAFIDELLGETLDKKAIAARIRERFQARRKEE
SIO_010081: SJ05684_RS27185
subclass of: SO_0000673
so part of: SJ05684_RS27185
location: complement(10444..12096)
location: region:10444-12096:-1
so has part: feature:10444-12096:-1:exon

WP_014330218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10444-12096:-1:exon

SJ05684_RS27190
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27190
old locus tag: SJ05684_a37170
so part of: sequence
location: complement(12089..12685)
location: region:12089-12685:-1
so has part: feature:12089-12685:-1:exon
subclass of: SO_0000010

position:12089:-1
position: 12089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12685:-1
position: 12685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12089-12685:-1:exon

SJ05684_RS27190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27190
old locus tag: SJ05684_a37170
function: Site-specific recombinases, DNA invertase Pin homologs
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330217.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRVGYARVSTIDQNPELQLEALRRAGCEKVFTERGSGAADDRPELGRILSDVLRTGDTLVVWKLDRLARSLKKLIATAEELERAKIGLVSLTESIDTTTPGGMLTFHVFGAIAQFERALIRERTTAGLVEARQRGRKGGRPPAMRPSDIAAARALMKEGSIPVRNIAQRMGVSVATLYRHIGKKGGVTKIVESEEAHG
SIO_010081: SJ05684_RS27190
subclass of: SO_0000673
so part of: SJ05684_RS27190
location: complement(12089..12685)
location: region:12089-12685:-1
so has part: feature:12089-12685:-1:exon

WP_014330217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12089-12685:-1:exon

SJ05684_RS27195
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27195
old locus tag: SJ05684_a37190
pseudo: true
so part of: sequence
location: 13156..14150
location: region:13156-14150:1
so has part: feature:13156-14150:1:exon
subclass of: SO_0000010

position:13156:1
position: 13156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14150:1
position: 14150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13156-14150:1:exon

SJ05684_RS27195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27195
old locus tag: SJ05684_a37190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330934.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: SJ05684_RS27195
subclass of: SO_0000673
so part of: SJ05684_RS27195
location: 13156..14150
location: region:13156-14150:1
so has part: feature:13156-14150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13156-14150:1:exon

SJ05684_RS27200
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27200
old locus tag: SJ05684_a37200
so part of: sequence
location: complement(14159..14449)
location: region:14159-14449:-1
so has part: feature:14159-14449:-1:exon
subclass of: SO_0000010

position:14159:-1
position: 14159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14449:-1
position: 14449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14449:-1:exon

SJ05684_RS27200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27200
old locus tag: SJ05684_a37200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYRNSALYTLKYVAAMLDEDEDFLRECSIEMFSEDGCLWAYDDYPASELSEHIILFTQVGIENLQQIIRNLRGIGDPPSKPVAERNRKKPRLLRS
SIO_010081: SJ05684_RS27200
subclass of: SO_0000673
so part of: SJ05684_RS27200
location: complement(14159..14449)
location: region:14159-14449:-1
so has part: feature:14159-14449:-1:exon

WP_014330935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14449:-1:exon

SJ05684_RS27205
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27205
old locus tag: SJ05684_a37210
so part of: sequence
location: complement(14479..15090)
location: region:14479-15090:-1
so has part: feature:14479-15090:-1:exon
subclass of: SO_0000010

position:14479:-1
position: 14479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15090:-1
position: 15090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14479-15090:-1:exon

SJ05684_RS27205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27205
old locus tag: SJ05684_a37210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009798294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MTVDRIARLHIQLDDIEPLIWRRVEVPLTMSLKGLHDVIQAVMLFEDYHLFEFEAGGRCYDVPDPEDLYERKTFAARNVRIAALIERGIATFSYTYDFGDNWRHTITVEAVEDGNPSIEYPRFIDGERRAPPEDVGSTSGFEEFLNVMAKPRHAQHREFVRWYGGRFDPEDLSVDIIQDRVAKIARRRTLGKAGFAKSQNQQH
SIO_010081: SJ05684_RS27205
subclass of: SO_0000673
so part of: SJ05684_RS27205
location: complement(14479..15090)
location: region:14479-15090:-1
so has part: feature:14479-15090:-1:exon

WP_014857805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14479-15090:-1:exon

SJ05684_RS27210
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27210
old locus tag: SJ05684_a37220
so part of: sequence
location: complement(15087..16673)
location: region:15087-16673:-1
so has part: feature:15087-16673:-1:exon
subclass of: SO_0000010

position:15087:-1
position: 15087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16673:-1
position: 16673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15087-16673:-1:exon

SJ05684_RS27210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27210
old locus tag: SJ05684_a37220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MILAERAARREAEAVAARAQAVNSHSDALIARLRLEIEKLKRDIHGSRSERKARLLEQMELQLEELEADASQDELAAELAARSSTVRAFERKRPSRKPFPEHLPRERVVIAPPTSCPCCGSAKLAKLGEDIAETLEVIPRQWKVIQTVREKFSCRECEKIAQPPAPFHVTPRGFAGPNLLAMILFEKFGQHQPLNRQSERYAREGVDLSLSTLADQVGACAAVLKPLHGLIEAHVLTAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFSGTSPPAALYYASRDRRQEHPERHLKTFTGILQADAYGGYNPLFKMDRDSGPLTQALCWSHSRRKFFVLADIATNAKRGKNATPISPVALEAVKRIDALFDIERDINRLAASERLARRQRDSRRLVEELEAWMRAERTKLSRSSPVAEPIDYMLKRWEGFTSFLGDGRICLTNNAAERALRGFALGRKSWLFAGSDRGADRAAFMATMIMTAKLNDVDPQAWLADVLARIADTPTTKLAELLPWNWTGPRPMMALAS
SIO_010081: SJ05684_RS27210
subclass of: SO_0000673
so part of: SJ05684_RS27210
location: complement(15087..16673)
location: region:15087-16673:-1
so has part: feature:15087-16673:-1:exon

WP_231698950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15087-16673:-1:exon

SJ05684_RS27215
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27215
old locus tag: SJ05684_a37230
so part of: sequence
location: complement(16770..17117)
location: region:16770-17117:-1
so has part: feature:16770-17117:-1:exon
subclass of: SO_0000010

position:16770:-1
position: 16770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17117:-1
position: 17117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16770-17117:-1:exon

SJ05684_RS27215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27215
old locus tag: SJ05684_a37230
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPSGVKVWLATGYTDMRRGFPGLSLMVQETLKRDPHSGHLFCFRGRKGGLIKVIWHDGQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPSSAG
SIO_010081: SJ05684_RS27215
subclass of: SO_0000673
so part of: SJ05684_RS27215
location: complement(16770..17117)
location: region:16770-17117:-1
so has part: feature:16770-17117:-1:exon

WP_014330938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16770-17117:-1:exon

SJ05684_RS27220
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27220
so part of: sequence
location: complement(17114..17506)
location: region:17114-17506:-1
so has part: feature:17114-17506:-1:exon
subclass of: SO_0000010

position:17114:-1
position: 17114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17506:-1
position: 17506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17114-17506:-1:exon

SJ05684_RS27220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27220
function: Transposase and inactivated derivatives
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKQHIEVITSVERRRHWSREEKERLVAAALEPGTVVSDVARSAGIHVSQLFRWRKELCQMSAPSVPPFIPIEVVAALPAPDPLETTPAPRARKKPSIVTIELGRGRRIRVESDVDTEALGRILDVVERR
SIO_010081: SJ05684_RS27220
subclass of: SO_0000673
so part of: SJ05684_RS27220
location: complement(17114..17506)
location: region:17114-17506:-1
so has part: feature:17114-17506:-1:exon

WP_014330939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17114-17506:-1:exon

SJ05684_RS27225
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27225
old locus tag: SJ05684_a37250
so part of: sequence
location: complement(17915..19153)
location: region:17915-19153:-1
so has part: feature:17915-19153:-1:exon
subclass of: SO_0000010

position:17915:-1
position: 17915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19153:-1
position: 19153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17915-19153:-1:exon

SJ05684_RS27225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27225
old locus tag: SJ05684_a37250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017273650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-grasp domain-containing protein
translation: MKREIIFVEASTTGAGSRAQQLAHAEGLNVTLLTRDRGRYGADVLSSADNIFFCDTNKHAEVVRIVRQRGLNSSIAAVTTTADMYVPQAALAAQEMSLPGLGYEAALRARNKHLMRLALAERAPEHNVPFFLALNPDEAVAAAQQLNYPLVVKPQEENDGVGVRLIHNESQLTDYMATARSFTRNSAGQGSPPGILMEAYIAGTEFSVETIQFCAGPCQVIGVTTKEMTGLKRNHFIEAGHSFPYVGPEAAALAAATCRVLNALDICHGAVHTECRVDGEDIRIMEINPRLAGGKIGSHLIEMATGLSAVQAVLDAALGKTLEWRCAESKGAAIHFIWTERPGIFRGIKNTAQLLAMPGIVSVAPIAKFGAHVRPPTSNGDHVAEILAVGQTATTANARAKAAHASARLILD
SIO_010081: SJ05684_RS27225
subclass of: SO_0000673
so part of: SJ05684_RS27225
location: complement(17915..19153)
location: region:17915-19153:-1
so has part: feature:17915-19153:-1:exon

WP_014857770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17915-19153:-1:exon

SJ05684_RS27230
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27230
old locus tag: SJ05684_a37260
so part of: sequence
location: complement(19172..20776)
location: region:19172-20776:-1
so has part: feature:19172-20776:-1:exon
subclass of: SO_0000010

position:19172:-1
position: 19172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20776:-1
position: 20776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19172-20776:-1:exon

SJ05684_RS27230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27230
old locus tag: SJ05684_a37260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEDIVLVAPNCGAFAKRQFPSRRLIAILDEAQLDAFLASCRASSLTFCGTWRQLTVRVSRALAQWAIQEPERGCGFSLATNVSPQMRPRRPLDGNRVYEIIDGFPATEHNAAGRQVIDSNFVIGRLLDPNLPAPSGVVITGHGSEYCIRLDSRWFSTFNTAFLTDPIILPSFKLGDVIFLNCCSSLKLGDSCVPESYSLAALLFSLGSAVIGSFRNLHTSPHYAAVFAQALLQGNSLGEIVNRLNAESNRFERGVAFQLLGDPLHRLSPVNIRPSIGPLQSRPPQLPLPSSLRRALEDNLGLELLSAALTRWIPESSALAEIHANVKDLTESAGSTDHAWHITGLGEEEVAQLGQFFEHQRHALQLALITALAQSIQTTGWIQTRYATFCRRLSPTTHTCARCGGVSNWTRYEPFASYLPTVHREECDHCGTTQERIGDGPQLTILTVQPEASSVAISIPTPPQRSQGLLLFHRMPSFAPIPWPQNGGKVHIPYTALSFLGRLTLVAAVLSPKCLALQYHTFFVCPDLPHEMV
SIO_010081: SJ05684_RS27230
subclass of: SO_0000673
so part of: SJ05684_RS27230
location: complement(19172..20776)
location: region:19172-20776:-1
so has part: feature:19172-20776:-1:exon

WP_014857769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19172-20776:-1:exon

SJ05684_RS27235
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27235
so part of: sequence
location: complement(20807..21754)
location: region:20807-21754:-1
so has part: feature:20807-21754:-1:exon
subclass of: SO_0000010

position:20807:-1
position: 20807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21754:-1
position: 21754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20807-21754:-1:exon

SJ05684_RS27235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013875026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatinase family protein
translation: MQVTSSVPIVNDPTVRWIRDCWVTAQSAPHDSPAFGFVSVPFDFAVSHRPGCRFGPEKILSALNTLSAYCVDKRVSLDKTSFVECGSVDALHSLEQSYSNIRAAIAALPRRLLPIVLGGDHSITDPAIRGVRDRLSGAPMGLIVFDAHFDSREPIPGKEHSGHWMRTLSDVIDYRKVVQMGINAAIYSEAYMREAEAAGVLVMTPYDIRRVGWTVALRTAIEHGTADGAGVYISVDIDGIDQAYAPGTSVPNCGGLLAHEVLDAVFEIAVNAPTLALDITEVSPPLDRDDMTSRLAAQIIMNFMAGVVRQTSSGT
SIO_010081: SJ05684_RS27235
subclass of: SO_0000673
so part of: SJ05684_RS27235
location: complement(20807..21754)
location: region:20807-21754:-1
so has part: feature:20807-21754:-1:exon

WP_255876788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20807-21754:-1:exon

SJ05684_RS27240
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27240
old locus tag: SJ05684_a37280
so part of: sequence
location: complement(21755..22948)
location: region:21755-22948:-1
so has part: feature:21755-22948:-1:exon
subclass of: SO_0000010

position:21755:-1
position: 21755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22948:-1
position: 22948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21755-22948:-1:exon

SJ05684_RS27240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27240
old locus tag: SJ05684_a37280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020479656.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MSIGKASTAYADLPHIVAARERIENLWAAGTDYSKDIVDDARSNNRMLHLDLDLTGECKLNCFYCDRTPDRYNSVPNRVELTTAERLDLIEQARNLGATTVEFPGAGEPMIDVGFWDIIAGVHGHGMTPVIFTSGYHLDRSAADRLFQLGATVFIKHNSSDTHIQDKMVGLAGYAEKANAGLHYLLEKGFNQSIPTRVAVDMVVTPQFNESKDFEEVVELHRWCRINNVHNYIVTLIPEGRADRAAMILERERSNNMLEAVRKVDEQEFGLTYKPSRPMSGGYRCRQVNVGLFVNLFGEVYDCNGLGRFLGHVRCDSLETIWNSKFARHVRTPVQDGFCLLRERVWDSVQSSGMERKLHLYRRFEGRHGADEVVERGLHAMHQGEETPTVVPSAGSV
SIO_010081: SJ05684_RS27240
subclass of: SO_0000673
so part of: SJ05684_RS27240
location: complement(21755..22948)
location: region:21755-22948:-1
so has part: feature:21755-22948:-1:exon

WP_015633602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21755-22948:-1:exon

SJ05684_RS30125
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30125
old locus tag: SJ05684_a37290
so part of: sequence
location: complement(23089..23241)
location: region:23089-23241:-1
so has part: feature:23089-23241:-1:exon
subclass of: SO_0000010

position:23089:-1
position: 23089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23241:-1
position: 23241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23089-23241:-1:exon

SJ05684_RS30125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30125
old locus tag: SJ05684_a37290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857766.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDLKYGKGDEAEALKLAIRELSEAQKIVHTALISEKLEKVSKLLATVQV
SIO_010081: SJ05684_RS30125
subclass of: SO_0000673
so part of: SJ05684_RS30125
location: complement(23089..23241)
location: region:23089-23241:-1
so has part: feature:23089-23241:-1:exon

WP_014857766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23089-23241:-1:exon

SJ05684_RS27245
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27245
old locus tag: SJ05684_a37300
so part of: sequence
location: 23496..24023
location: region:23496-24023:1
so has part: feature:23496-24023:1:exon
subclass of: SO_0000010

position:23496:1
position: 23496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24023:1
position: 24023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23496-24023:1:exon

SJ05684_RS27245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27245
old locus tag: SJ05684_a37300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCSWERFCAFAREPERRTVAGDATVSVEGASYEVEPELAGETVTLLWGLFDLELFVEHEGKRLGPFQPSRGAVPLFRYRKYQKSRTEERLDKVVRLADQLGLPRAAVTGGDRPLPSLPSTAAGLSVWRTPFPEPAIETAYPNGLAARGAIVDQLGLDRATASGRRAGLTHALAGN
SIO_010081: SJ05684_RS27245
subclass of: SO_0000673
so part of: SJ05684_RS27245
location: 23496..24023
location: region:23496-24023:1
so has part: feature:23496-24023:1:exon

WP_015633601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23496-24023:1:exon

SJ05684_RS27250
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27250
old locus tag: SJ05684_a37310
so part of: sequence
location: complement(24157..27609)
location: region:24157-27609:-1
so has part: feature:24157-27609:-1:exon
subclass of: SO_0000010

position:24157:-1
position: 24157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27609:-1
position: 27609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24157-27609:-1:exon

SJ05684_RS27250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27250
old locus tag: SJ05684_a37310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLELAKELRSAGTPAFVFRIEALCRLSAEDSFSPHDEASPTAFARWKVKRGPAVALLDALDEARLPDARNTSALADALARLSREVGSAGKELRVIISSRASEWQGDGDLRAIETAIKGFRVSDPSQEAQIKVKTLRLLPLRKPDVRKIAKHRGVDPDQFAAAIDRAKAANLVSQPLDVQLLLDLWLEAVGEGKEPPSIFSSRLQVYEDIVRFRLRTESGQERRSNLDPLLGRQACEKLAAISVLSDVQDFTSEPDKPMAIHALSALSSDADRWTEMDVRQLLSYGLFQPSISGRVRFAHRELRDYLAACFFRRAIGQNAGSLDVVKPLLAEGLGCTEVPQSTEHVLGWLATIDPIARRIVTRIRPSLLIETGDPTRLTVDEKSRAIAAHVAAYRERLYRGEWFYQEDVREFVTPDLAPAIGEQLAIATSPEVRELLVEMIRFGQMTSMAADLRTIACDQTEGLRVRAEACLALADLNDFSFAHDVLAAALLSTAPKHEDTQSAPSWNLFVASAVRYVVPAGVSLLDAIALVDRFRREAKNYASATAMLLEGLVAELSLDQLGNWLQIFLRFARAPRKSDRDMMPTIQPRFRMLGAPICQALDRLLQHGGEVLPKAVRLEALEFVFGLNGRQSYSLRETSFDKLATTIRPLNDLKIDLILMRLALFENMQSEWYVARQAVGPLKIDRSDKAVEVFNSKDIERLGALMAEEQTERDRDLYFTCAQFVFDEIRDAEERKHANAILRNLARTHGSSELKRAYGHLAPIRRLKHQFRHKDWYQIKHRFHASVDSVIDACWKLRNGATFLRDFRGLSQGRRPGYLAWAVNKSPNDLGPAVIERMRERHGQLIAGLFASGFKRYWRENGITYPAQSDYQAMIGLTGLALQSLSELANLSDDLIERAFTYGFSNMNGFPDWMPALITLKPGIFVTVATTVLTQDITSSSEEKFSSDGFSRIAYSTSAIRELTAAPLFQLLQTAGIPENRRDLEMALTIIARSHAVSASQLSPILRQQFAAHVIEFRFAEAWLWLDALFAIDSAAAWSTWIATFGALWSPSSASLFKRYMGREELSNSRAEERAEERDALDADAQTLCHLIKAAYLVWPPSNDPVHEDAYSPGIDDKATSRRGYYLNGLAALGNEDALQALDRCSRLPT
SIO_010081: SJ05684_RS27250
subclass of: SO_0000673
so part of: SJ05684_RS27250
location: complement(24157..27609)
location: region:24157-27609:-1
so has part: feature:24157-27609:-1:exon

WP_144051999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24157-27609:-1:exon

SJ05684_RS27255
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27255
old locus tag: SJ05684_a37320
so part of: sequence
location: 27782..28861
location: region:27782-28861:1
so has part: feature:27782-28861:1:exon
subclass of: SO_0000010

position:27782:1
position: 27782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28861:1
position: 28861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27782-28861:1:exon

SJ05684_RS27255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27255
old locus tag: SJ05684_a37320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MRTGIAFTVSPTDRQRLRALISDRNAPQKHVWRAEIILLSADGVGTVEIMRQTGKSKTCVWRWQERFATEGFEGLLRDKTRPSRIAPLGPEIGEQVVALSLADPPGETTHWTADMMAAEVGVSASAVRRIWKAHGLQPHRWRAFKLSNDPQFVAKLKDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAQVPADKAIHVILDNYAAHKHPKVRAWLDRHQRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVVDLQAAINRFLTEHNQQPKPFTWTADPDKIIAAVKRGHQVLDSIH
SIO_010081: SJ05684_RS27255
subclass of: SO_0000673
so part of: SJ05684_RS27255
location: 27782..28861
location: region:27782-28861:1
so has part: feature:27782-28861:1:exon

WP_037446536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27782-28861:1:exon

SJ05684_RS27260
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27260
so part of: sequence
location: 29177..29749
location: region:29177-29749:1
so has part: feature:29177-29749:1:exon
subclass of: SO_0000010

position:29177:1
position: 29177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29749:1
position: 29749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29177-29749:1:exon

SJ05684_RS27260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTKAAGLSSRQLLARQARESHRRYDIFLSQAIRDEELILGIYSILTEDIGLTVFCDWVESPLSHRANTTPADAEYIKGKMLASRGLMFIDSEHAETSSWMSWEIGWFHGAKRRVCVLPIVRSEDDQYRGREFLGLYPMVEEDDRFALRVPARMADIMSRYAAPEPLALARWMPFQVWATVETLPDQFLS
SIO_010081: SJ05684_RS27260
subclass of: SO_0000673
so part of: SJ05684_RS27260
location: 29177..29749
location: region:29177-29749:1
so has part: feature:29177-29749:1:exon

WP_034859931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29177-29749:1:exon

SJ05684_RS27265
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27265
pseudo: true
so part of: sequence
location: complement(29862..>30104)
location: region:29862-30104:-1
so has part: feature:29862-30104:-1:exon
subclass of: SO_0000010

position:29862:-1
position: 29862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30104:-1
position: 30104
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29862-30104:-1:exon

SJ05684_RS27265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012709013.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27265
subclass of: SO_0000673
so part of: SJ05684_RS27265
location: complement(29862..>30104)
location: region:29862-30104:-1
so has part: feature:29862-30104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29862-30104:-1:exon

SJ05684_RS27270
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27270
so part of: sequence
location: complement(30123..31183)
location: region:30123-31183:-1
so has part: feature:30123-31183:-1:exon
subclass of: SO_0000010

position:30123:-1
position: 30123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31183:-1
position: 31183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30123-31183:-1:exon

SJ05684_RS27270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS27270
subclass of: SO_0000673
so part of: SJ05684_RS27270
location: complement(join(30123..30691,30691..31183))
location: region:30123-31183:-1
so has part: feature:30691-31183:-1:exon
so has part: feature:30123-30691:-1:exon

WP_085939171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30691-31183:-1:exon

position:30691:-1
position: 30691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30123-30691:-1:exon

SJ05684_RS27275
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27275
old locus tag: SJ05684_a37350
pseudo: true
so part of: sequence
location: complement(<31231..32103)
location: region:31231-32103:-1
so has part: feature:31231-32103:-1:exon
subclass of: SO_0000010

position:31231:-1
position: 31231
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:32103:-1
position: 32103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31231-32103:-1:exon

SJ05684_RS27275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27275
old locus tag: SJ05684_a37350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611883.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27275
subclass of: SO_0000673
so part of: SJ05684_RS27275
location: complement(<31231..32103)
location: region:31231-32103:-1
so has part: feature:31231-32103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31231-32103:-1:exon

SJ05684_RS27280
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27280
old locus tag: SJ05684_a37360
so part of: sequence
location: complement(32631..34328)
location: region:32631-34328:-1
so has part: feature:32631-34328:-1:exon
subclass of: SO_0000010

position:32631:-1
position: 32631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34328:-1
position: 34328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32631-34328:-1:exon

SJ05684_RS27280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27280
old locus tag: SJ05684_a37360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633366.1
GO function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoethanolamine--lipid A transferase
translation: MTVFRIRRPEIGSVALSAIATLYLLMLANNSFWSHAVVYFDHAWIAMLSLGTALALTTFSTLTSLSMKYVTKPVLILLIAISAAVSYFTDTFGVVIDKEMIGNAAVTTQAEAGHLLTGGLALHLAIYALIPSLLIAWVKVMHRRFFAKAAVNFLFIAPALVLSGVLIYVNFAGIAYALREHRDLMVRFNPAGPISSAVRYGLSTYRERNLVVQPLGTDAKEGSRIAAAGKPVVVVVVAGETARAMNFSLNGYDRETNPELKALGVVNYRDTTSCGTATAVSLPCMFSVYPRAEYSDWKARSTENLVNVLTHAGVLVTWWDNNTGSKGIADLINFASMTRRKNGPLCNNGECLDEIFLADLDKKLGATTNDSVIVLHQLGSHGPSYYLRYPEAFRRFTPDCRTPELMSCTTEEIVNAYDNTILYTDHILASVARLLEKHQDRIAGAMIYMSDHGESLGENGIYLHGAPYAIAPKEQTQVPFIAWFSKPYQTAMGVDAACLSTDADTPKSHDNLFHTVLGMMDVQTGVYKRSLDAFAACTRPAEREKQAPGFHAAERRLRAGPGGVL
SIO_010081: SJ05684_RS27280
subclass of: SO_0000673
so part of: SJ05684_RS27280
location: complement(32631..34328)
location: region:32631-34328:-1
so has part: feature:32631-34328:-1:exon

WP_034859615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32631-34328:-1:exon

SJ05684_RS27285
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27285
so part of: sequence
location: 34615..34887
location: region:34615-34887:1
so has part: feature:34615-34887:1:exon
subclass of: SO_0000010

position:34615:1
position: 34615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34887:1
position: 34887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34615-34887:1:exon

SJ05684_RS27285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27285
inference: COORDINATES: protein motif:HMM:NF025051.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MLICVLATVVLPTFAFADDDNASCTKEPQSAWMKPDAAGSKLEEAGYTDIRNVKVAGTCYEIYAFTAKHERAEVYMNPVTGEIVKAELED
SIO_010081: SJ05684_RS27285
subclass of: SO_0000673
so part of: SJ05684_RS27285
location: 34615..34887
location: region:34615-34887:1
so has part: feature:34615-34887:1:exon

WP_015633367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34615-34887:1:exon

SJ05684_RS27290
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27290
old locus tag: SJ05684_a37380
so part of: sequence
location: 34887..35447
location: region:34887-35447:1
so has part: feature:34887-35447:1:exon
subclass of: SO_0000010

position:35447:1
position: 35447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34887-35447:1:exon

SJ05684_RS27290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27290
old locus tag: SJ05684_a37380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858087.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b/b6 domain-containing protein
translation: MPKSAAGRREALASRNGDVRVWDPVVRLFHWGLVACCVINLFLLPPGKSVHRYVGYAAMALIALRFVWGFVGTRHARFADFVRGPSAVASYLFAFAAGRAERHVGHNPAAGWVMILLMVLLAAVGTSGWLTTLDAFWGNKALGETHELLANSLMIVAGLHASAAVVESWHLKENLIWSMVTGRKKG
SIO_010081: SJ05684_RS27290
subclass of: SO_0000673
so part of: SJ05684_RS27290
location: 34887..35447
location: region:34887-35447:1
so has part: feature:34887-35447:1:exon

WP_014858087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34887-35447:1:exon

SJ05684_RS27295
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27295
old locus tag: SJ05684_a37390
so part of: sequence
location: 35462..36136
location: region:35462-36136:1
so has part: feature:35462-36136:1:exon
subclass of: SO_0000010

position:35462:1
position: 35462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36136:1
position: 36136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35462-36136:1:exon

SJ05684_RS27295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27295
old locus tag: SJ05684_a37390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014761898.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRLLLVEDSPRLIELVGETMRDAGWRLDAVSSVNEAEAAIGGREHDLVLLDLGLPDGDGLDLLKWIRQQHAGLPVLVITARGSVDERVQGLDAGADDYLVKPFHHRELLSRCRAMLRRNPHAIQPVLEAGALRFDPATAELTCDGVIVALPPRERSLIEILMREVGRVVPKRRLEIALSEYGQELSSNALELAVSRVRKRLQPLDTGVQIETVRGIGYLLRAAA
SIO_010081: SJ05684_RS27295
subclass of: SO_0000673
so part of: SJ05684_RS27295
location: 35462..36136
location: region:35462-36136:1
so has part: feature:35462-36136:1:exon

WP_014858088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35462-36136:1:exon

SJ05684_RS27305
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27305
old locus tag: SJ05684_a37400
so part of: sequence
location: complement(36385..36636)
location: region:36385-36636:-1
so has part: feature:36385-36636:-1:exon
subclass of: SO_0000010

position:36385:-1
position: 36385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36636:-1
position: 36636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36385-36636:-1:exon

SJ05684_RS27305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27305
old locus tag: SJ05684_a37400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MTQHWFHLYVQRTDASSNMARFYQLSVEPDLFGGAALIRRWGRIGTRGQERIHLFDNDRQAISRFLVLARQKRARGYRPQSCY
SIO_010081: SJ05684_RS27305
subclass of: SO_0000673
so part of: SJ05684_RS27305
location: complement(36385..36636)
location: region:36385-36636:-1
so has part: feature:36385-36636:-1:exon

WP_015633368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36385-36636:-1:exon

SJ05684_RS27310
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27310
so part of: sequence
location: complement(36938..37411)
location: region:36938-37411:-1
so has part: feature:36938-37411:-1:exon
subclass of: SO_0000010

position:36938:-1
position: 36938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37411:-1
position: 37411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36938-37411:-1:exon

SJ05684_RS27310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017275278.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSSRGLVETTDPELERPVYRQPGFDGILTAKEMDEKISAWLKKAREKKGISRADAAQLLGLSVSVYGRYERSESRMTVPRLIHLCEITGFTPLDMIFEVGPHLWGKTPEEAEDRRTLTKLVESLPHDTIRDLIRLMKRMTPGEPSAGSVVTSNGESR
SIO_010081: SJ05684_RS27310
subclass of: SO_0000673
so part of: SJ05684_RS27310
location: complement(36938..37411)
location: region:36938-37411:-1
so has part: feature:36938-37411:-1:exon

WP_034859617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36938-37411:-1:exon

SJ05684_RS29845
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29845
so part of: sequence
location: 37550..37810
location: region:37550-37810:1
so has part: feature:37550-37810:1:exon
subclass of: SO_0000010

position:37550:1
position: 37550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37810:1
position: 37810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37550-37810:1:exon

SJ05684_RS29845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANSRNALKRNASASGKACTRKLKPQKSWSGKKQLAILDRYNLPTIRLRLKNSLDLRLTFDPTELRSQFASQLGVSDSNAALDPHL
SIO_010081: SJ05684_RS29845
subclass of: SO_0000673
so part of: SJ05684_RS29845
location: 37550..37810
location: region:37550-37810:1
so has part: feature:37550-37810:1:exon

WP_153458762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37550-37810:1:exon

SJ05684_RS30740
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30740
so part of: sequence
location: complement(38048..38488)
location: region:38048-38488:-1
so has part: feature:38048-38488:-1:exon
subclass of: SO_0000010

position:38048:-1
position: 38048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38488:-1
position: 38488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38048-38488:-1:exon

SJ05684_RS30740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKGQTTVSDFAVAPRRSRPADQAATQEGSATKAPEVQKEKPLAEHQPKRPEPPSAEAEKPVSRLIAPTDEARRERAVTKALQREDSRVRLRDLKRARDRESKHYVNCPLDYDTKMRLQKAALDNDVKMTVIMKASIDQFLKDNGY
SIO_010081: SJ05684_RS30740
subclass of: SO_0000673
so part of: SJ05684_RS30740
location: complement(38048..38488)
location: region:38048-38488:-1
so has part: feature:38048-38488:-1:exon

WP_015633371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38048-38488:-1:exon

SJ05684_RS27325
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27325
old locus tag: SJ05684_a37440
so part of: sequence
location: complement(38481..39194)
location: region:38481-39194:-1
so has part: feature:38481-39194:-1:exon
subclass of: SO_0000010

position:38481:-1
position: 38481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39194:-1
position: 39194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38481-39194:-1:exon

SJ05684_RS27325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27325
old locus tag: SJ05684_a37440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018210763.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPLCISAVSGKGGAGKTTAVILIAGEYALQGKRVLLIDADGRQNLQEWWKRCEAKDNLPDNIELITAARQTTVQQLLENDANKFDVVLMDSPGQDTVLRDTIIAGSHIVLTPIQPNQDEIKAAGQAAADTADISDKVGRVIPHANFVTRITMPAKYLEAYRLVRPFVQNLQEGGYDSYLLATELMERNCYREIRNGYGTLQMLDLTDSVKKGRAEVMNLVGDIEALLADEETGVANG
SIO_010081: SJ05684_RS27325
subclass of: SO_0000673
so part of: SJ05684_RS27325
location: complement(38481..39194)
location: region:38481-39194:-1
so has part: feature:38481-39194:-1:exon

WP_034859607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38481-39194:-1:exon

SJ05684_RS27330
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27330
old locus tag: SJ05684_a37450
so part of: sequence
location: 39839..40240
location: region:39839-40240:1
so has part: feature:39839-40240:1:exon
subclass of: SO_0000010

position:39839:1
position: 39839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40240:1
position: 40240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39839-40240:1:exon

SJ05684_RS27330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27330
old locus tag: SJ05684_a37450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013845298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6290 family protein
translation: MDDGKFNALLEPTKKDRTVHVRVTADEHAAIEKAAESAGMTVSSFFRSLLLEGAGVKPMLTGDDRLVMAALLEDMRMIGINLNQVARALNSGRGVHPSELDINLENVQRVQAAVMSELRALTRRAGYQRRGEK
SIO_010081: SJ05684_RS27330
subclass of: SO_0000673
so part of: SJ05684_RS27330
location: 39839..40240
location: region:39839-40240:1
so has part: feature:39839-40240:1:exon

WP_034859608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39839-40240:1:exon

SJ05684_RS27335
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27335
old locus tag: SJ05684_a37460
so part of: sequence
location: 40244..42745
location: region:40244-42745:1
so has part: feature:40244-42745:1:exon
subclass of: SO_0000010

position:40244:1
position: 40244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42745:1
position: 42745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40244-42745:1:exon

SJ05684_RS27335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27335
old locus tag: SJ05684_a37460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014531058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIFFGAFTSEWEQRRVALLHEMSSDGRGASAEEEMRKRLKQLAQLGAAGGGGGAGGASGGRGFASKGRGAPQAQVTSATTVARSIEARLGAIAKGSQPAVVKMASYGGGARVGAMLNYVSRGGELKVENQNGRILEGREELARIRGDWDHLFQNRAESRDIGSFSVEIAAADFASDEALHDQVRSTLTSGFGDRRYAYAIEKNERGSVTVQGLVVLRSGQGERLTSDAKAAGIIQGRYDASAAAGEAAAKFSFQGYGNGVEFGASRLRGLVERHEDVWDDRGQSIANEKAAGDLVQKEWRGELHSRKSRDVMHVIMSARAGTDVAAFEGAVRDFLAQQFARHRYVFAMHDPASDPKEAGEGGKRPHVHAHAIVAMKSDSCDRIETTPAVFREWRSVMAEKAREHGIEMEMTDRREFASPPAFTRTQVRPVSREGRTEHVGTSEAAQARYDAKRAGRRTVAKSDRSRQYIITAQESWQKVALAGGDRQVVAYAAQHRDYLESGLSMAQAEMGGSVIRADFGSDFRINLATLQEMVLEGQELREMSRAEFETYEKKVETALFKLERSVSADDRADFDEIAGLARDFVNQKRELVDLYAQRKEALAEQGGEAPRSEPRDPANDEWDAAVAKHGEALVEAGNEAMIEIEHYREGLDRIETGEFSADRKDGMQPGLQQALERAAQLAVQGNSYLREVADQDQDLQQAIERAERQAEAQDLQDDERADVKNRDDDRPIEGKDKAPANVDAAAADQRLEAREEPDQQPIDNDTREAHELASTVDATNRLQDRLDKDKEAAQRSGETTRTDPAQQHIPRLDELEREQMQQRKRDRDDRDR
SIO_010081: SJ05684_RS27335
subclass of: SO_0000673
so part of: SJ05684_RS27335
location: 40244..42745
location: region:40244-42745:1
so has part: feature:40244-42745:1:exon

WP_034859609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40244-42745:1:exon

SJ05684_RS27340
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27340
old locus tag: SJ05684_a37470
so part of: sequence
location: 42751..42963
location: region:42751-42963:1
so has part: feature:42751-42963:1:exon
subclass of: SO_0000010

position:42751:1
position: 42751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42963:1
position: 42963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42751-42963:1:exon

SJ05684_RS27340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27340
old locus tag: SJ05684_a37470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014531059.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNDNRQQYVIQSNDSKGDEWFGKFFGAVVLFVLFLAVARYVHESVMAWYRDTTIWLNAAATYVADFWPF
SIO_010081: SJ05684_RS27340
subclass of: SO_0000673
so part of: SJ05684_RS27340
location: 42751..42963
location: region:42751-42963:1
so has part: feature:42751-42963:1:exon

WP_034859612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42751-42963:1:exon

SJ05684_RS27345
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27345
old locus tag: SJ05684_a37480
so part of: sequence
location: complement(43296..43736)
location: region:43296-43736:-1
so has part: feature:43296-43736:-1:exon
subclass of: SO_0000010

position:43296:-1
position: 43296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43736:-1
position: 43736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43296-43736:-1:exon

SJ05684_RS27345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27345
old locus tag: SJ05684_a37480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015242304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE family protein
translation: MRAQMLAAIVCGLIFGAGLVISDMINPGRVLAFLDVAGNWDPTLAFVMGGALIPSAVANIIRSRGSAPLLDSRFYVPTNRSIDWKLVTGAALFGLGWGLVGFCPGPAIAALSTGRWEAVLFVAAMLIGMLVYRLSHRQRLPNYSAN
SIO_010081: SJ05684_RS27345
subclass of: SO_0000673
so part of: SJ05684_RS27345
location: complement(43296..43736)
location: region:43296-43736:-1
so has part: feature:43296-43736:-1:exon

WP_034859614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43296-43736:-1:exon

SJ05684_RS27350
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27350
old locus tag: SJ05684_a37490
so part of: sequence
location: complement(43733..44164)
location: region:43733-44164:-1
so has part: feature:43733-44164:-1:exon
subclass of: SO_0000010

position:43733:-1
position: 43733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44164:-1
position: 44164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43733-44164:-1:exon

SJ05684_RS27350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27350
old locus tag: SJ05684_a37490
function: Predicted transporter component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012881317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE thiosulfate transporter family protein
translation: MTEIDYLWPLAGGLLIGLSAGLYLLLNGRIAGISGLAAAAAGLTHDGDSKLGLGFLAGIIAGAWLAAALVRHPDITLTSSPALLIAAGLIVGYGTRLGSGCTSGHGVCGLARLSPRSLAATAIFMAVAGATVFVTRHLLGFQP
SIO_010081: SJ05684_RS27350
subclass of: SO_0000673
so part of: SJ05684_RS27350
location: complement(43733..44164)
location: region:43733-44164:-1
so has part: feature:43733-44164:-1:exon

WP_014329692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43733-44164:-1:exon

SJ05684_RS27355
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27355
old locus tag: SJ05684_a37500
pseudo: true
so part of: sequence
location: complement(44278..44993)
location: region:44278-44993:-1
so has part: feature:44278-44993:-1:exon
subclass of: SO_0000010

position:44278:-1
position: 44278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44993:-1
position: 44993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44278-44993:-1:exon

SJ05684_RS27355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27355
old locus tag: SJ05684_a37500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27355
subclass of: SO_0000673
so part of: SJ05684_RS27355
location: complement(44278..44993)
location: region:44278-44993:-1
so has part: feature:44278-44993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44278-44993:-1:exon

SJ05684_RS27365
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27365
so part of: sequence
location: 45446..46303
location: region:45446-46303:1
so has part: feature:45446-46303:1:exon
subclass of: SO_0000010

position:45446:1
position: 45446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46303:1
position: 46303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45446-46303:1:exon

SJ05684_RS27365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYSSITGSASQSTSASQADESGQAADDQTFTETLAEAASGSSSASRLYSLTSEPPIYELDRKTFEKELKNFYSDDVKHIADNPLEYSDFVSKKAERTAMVARVGASVADKPGAQYFSYQLGDKSVGLLRVDPGFRIKGKDWQKEHFPERKNISSVVAMRVTHPLVENAGDVLLEHQLRLDGKKPLIMSRPANDDPRPRLEQMGFVDVGGNEFVLDPKRHGDKWTLNGDREWQRADKPRQYLQAESEDPVEGRSDENEGYVETDSSSDDPSWYLERALNFRGGPAD
SIO_010081: SJ05684_RS27365
subclass of: SO_0000673
so part of: SJ05684_RS27365
location: 45446..46303
location: region:45446-46303:1
so has part: feature:45446-46303:1:exon

WP_034859666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45446-46303:1:exon

SJ05684_RS27370
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27370
pseudo: true
so part of: sequence
location: complement(<46551..>47099)
location: region:46551-47099:-1
so has part: feature:46551-47099:-1:exon
subclass of: SO_0000010

position:46551:-1
position: 46551
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:47099:-1
position: 47099
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46551-47099:-1:exon

SJ05684_RS27370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501082.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: SJ05684_RS27370
subclass of: SO_0000673
so part of: SJ05684_RS27370
location: complement(<46551..>47099)
location: region:46551-47099:-1
so has part: feature:46551-47099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46551-47099:-1:exon

SJ05684_RS27375
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: ltrA
locus tag: SJ05684_RS27375
pseudo: true
so part of: sequence
location: 47481..48957
location: region:47481-48957:1
so has part: feature:47481-48957:1:exon
subclass of: SO_0000010

position:47481:1
position: 47481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48957:1
position: 48957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47481-48957:1:exon

SJ05684_RS27375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: ltrA
locus tag: SJ05684_RS27375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013953463.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
SIO_010081: SJ05684_RS27375
subclass of: SO_0000673
so part of: SJ05684_RS27375
location: 47481..48957
location: region:47481-48957:1
so has part: feature:47481-48957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47481-48957:1:exon

SJ05684_RS27385
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: ltrA
locus tag: SJ05684_RS27385
old locus tag: SJ05684_a37530
so part of: sequence
location: 49529..50854
location: region:49529-50854:1
so has part: feature:49529-50854:1:exon
subclass of: SO_0000010

position:49529:1
position: 49529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50854:1
position: 50854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49529-50854:1:exon

SJ05684_RS27385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: ltrA
locus tag: SJ05684_RS27385
old locus tag: SJ05684_a37530
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007503666.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: METELDRIEAKARCEPKLRFTSLAHHITRDRVQRNLTRVPNRSAVGVDRQTVEAAKESFGEWIEPMLQSIHRQGYRAPAVRRVYIPKPGKTEKRPLGVPTVSDRALQRSTAEVLSAIYEQDFLPCSFGGRPERSAHHALSTLNEVISGGMTGWVLEADLKNFFGSLSHEWMLRFIEHRVGDPRLISLIRRWLKAGVLEDGAVHPSDEGTTQGGSISVLLSNVYLHYVLDLWFERVVKTRLRGEARLVRYIDDFVICFQYRSDALRVEEALRHRLGKFGLTLEPTKTKLVEFGRFAQRHAGKHGRNRPETFYFLGMTLYCTRNLKGNFKVGMRTEKSRLRRSVSSLQALMREMRHHTIRKQVGAINAVLRGHYAYYGVAGNYRSLTKVYRAGERYWLKVLRSRSRDGGHLTWDAFQQIKERTPLQQPKLRLPYRALRALAVL
SIO_010081: SJ05684_RS27385
subclass of: SO_0000673
so part of: SJ05684_RS27385
location: 49529..50854
location: region:49529-50854:1
so has part: feature:49529-50854:1:exon

WP_034859668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49529-50854:1:exon

SJ05684_RS27390
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27390
old locus tag: SJ05684_a37540
so part of: sequence
location: complement(51045..51350)
location: region:51045-51350:-1
so has part: feature:51045-51350:-1:exon
subclass of: SO_0000010

position:51045:-1
position: 51045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51350:-1
position: 51350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51045-51350:-1:exon

SJ05684_RS27390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27390
old locus tag: SJ05684_a37540
inference: COORDINATES: protein motif:HMM:NF024673.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MGIARSTYYDHPERPADDTAIVEAMFAICDEFEFYGYRRVGAALRQQGIVVNHKKIRRLGRQGAATSTSIMAASPVPNSTAGFPINMAIYSAAILIDAESP
SIO_010081: SJ05684_RS27390
subclass of: SO_0000673
so part of: SJ05684_RS27390
location: complement(51045..51350)
location: region:51045-51350:-1
so has part: feature:51045-51350:-1:exon

WP_014330950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51045-51350:-1:exon

SJ05684_RS27395
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27395
old locus tag: SJ05684_a37550
so part of: sequence
location: complement(51350..51700)
location: region:51350-51700:-1
so has part: feature:51350-51700:-1:exon
subclass of: SO_0000010

position:51700:-1
position: 51700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51350-51700:-1:exon

SJ05684_RS27395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27395
old locus tag: SJ05684_a37550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011504797.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MAKHRSHSVEFKRQVAQEFLAGETLHGLAKRHDVSRNLIRIWVQKYEEGAFDEDAQAVDLLQEYEARIAALERLVGKQALELEFLKGPLKNAPPPKSGTTSVITGPAASPSRKDAG
SIO_010081: SJ05684_RS27395
subclass of: SO_0000673
so part of: SJ05684_RS27395
location: complement(51350..51700)
location: region:51350-51700:-1
so has part: feature:51350-51700:-1:exon

WP_014857518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51350-51700:-1:exon

SJ05684_RS30745
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30745
old locus tag: SJ05684_a37560
pseudo: true
so part of: sequence
location: 52088..>52342
location: region:52088-52342:1
so has part: feature:52088-52342:1:exon
subclass of: SO_0000010

position:52088:1
position: 52088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52342:1
position: 52342
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52088-52342:1:exon

SJ05684_RS30745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30745
old locus tag: SJ05684_a37560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012335275.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: SJ05684_RS30745
subclass of: SO_0000673
so part of: SJ05684_RS30745
location: 52088..>52342
location: region:52088-52342:1
so has part: feature:52088-52342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52088-52342:1:exon

SJ05684_RS27405
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27405
old locus tag: SJ05684_a37570
so part of: sequence
location: 52509..53033
location: region:52509-53033:1
so has part: feature:52509-53033:1:exon
subclass of: SO_0000010

position:52509:1
position: 52509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53033:1
position: 53033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52509-53033:1:exon

SJ05684_RS27405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27405
old locus tag: SJ05684_a37570
function: Integrase
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKSGRELIPELKAVLSSRRYSPVVIGNYCAYAQEFLDYLGHRGIMVADVTEAEVARYLCDAVALFRKRRGRNPGKRWHEIPQSGIHALLRLVQHQWPPAPKATCAADRLRLAICNEYETWLREERGLAWASIDAFLWGARHFLAWQLERSGAEDLMEVSVGGHCKVISGLMQR
SIO_010081: SJ05684_RS27405
subclass of: SO_0000673
so part of: SJ05684_RS27405
location: 52509..53033
location: region:52509-53033:1
so has part: feature:52509-53033:1:exon

WP_014330952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52509-53033:1:exon

SJ05684_RS27410
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27410
pseudo: true
so part of: sequence
location: complement(53050..53765)
location: region:53050-53765:-1
so has part: feature:53050-53765:-1:exon
subclass of: SO_0000010

position:53050:-1
position: 53050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53765:-1
position: 53765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53050-53765:-1:exon

SJ05684_RS27410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27410
subclass of: SO_0000673
so part of: SJ05684_RS27410
location: complement(53050..53765)
location: region:53050-53765:-1
so has part: feature:53050-53765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53050-53765:-1:exon

SJ05684_RS27415
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27415
pseudo: true
so part of: sequence
location: complement(<53815..57865)
location: region:53815-57865:-1
so has part: feature:53815-57865:-1:exon
subclass of: SO_0000010

position:53815:-1
position: 53815
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:57865:-1
position: 57865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53815-57865:-1:exon

SJ05684_RS27415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650718.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
SIO_010081: SJ05684_RS27415
subclass of: SO_0000673
so part of: SJ05684_RS27415
location: complement(<53815..57865)
location: region:53815-57865:-1
so has part: feature:53815-57865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53815-57865:-1:exon

SJ05684_RS27420
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27420
old locus tag: SJ05684_a37630
pseudo: true
so part of: sequence
location: complement(57984..58384)
location: region:57984-58384:-1
so has part: feature:57984-58384:-1:exon
subclass of: SO_0000010

position:57984:-1
position: 57984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58384:-1
position: 58384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57984-58384:-1:exon

SJ05684_RS27420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27420
old locus tag: SJ05684_a37630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650568.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3085 domain-containing protein
SIO_010081: SJ05684_RS27420
subclass of: SO_0000673
so part of: SJ05684_RS27420
location: complement(57984..58384)
location: region:57984-58384:-1
so has part: feature:57984-58384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57984-58384:-1:exon

SJ05684_RS27425
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27425
old locus tag: SJ05684_a37640
so part of: sequence
location: complement(58398..59003)
location: region:58398-59003:-1
so has part: feature:58398-59003:-1:exon
subclass of: SO_0000010

position:58398:-1
position: 58398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59003:-1
position: 59003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58398-59003:-1:exon

SJ05684_RS27425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27425
old locus tag: SJ05684_a37640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MNPSPAIRKVFQGVASRQQMFRMFDRHAQRPNRWEGDASPLCAGEWFEITEVEHDYMFEILPPLWIRGAMFAMREYLAGSVTSVFFALRIDGDIRHFHGYCDLSDGQAVERMRVAIIERESRPVRAMTREERLEHIWSITADDYRGYAGDRWPEAACGKRTILLYGSKTGSMLKLLDDLTDDEIAGKLPVQLRHLPSPIAA
SIO_010081: SJ05684_RS27425
subclass of: SO_0000673
so part of: SJ05684_RS27425
location: complement(58398..59003)
location: region:58398-59003:-1
so has part: feature:58398-59003:-1:exon

WP_014330959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58398-59003:-1:exon

SJ05684_RS27430
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27430
old locus tag: SJ05684_a37650
pseudo: true
so part of: sequence
location: complement(59070..>59414)
location: region:59070-59414:-1
so has part: feature:59070-59414:-1:exon
subclass of: SO_0000010

position:59070:-1
position: 59070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59414:-1
position: 59414
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59070-59414:-1:exon

SJ05684_RS27430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27430
old locus tag: SJ05684_a37650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048105.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: toprim domain-containing protein
SIO_010081: SJ05684_RS27430
subclass of: SO_0000673
so part of: SJ05684_RS27430
location: complement(59070..>59414)
location: region:59070-59414:-1
so has part: feature:59070-59414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59070-59414:-1:exon

SJ05684_RS27435
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27435
so part of: sequence
location: 59501..60561
location: region:59501-60561:1
so has part: feature:59501-60561:1:exon
subclass of: SO_0000010

position:59501:1
position: 59501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60561:1
position: 60561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59501-60561:1:exon

SJ05684_RS27435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVRWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS27435
subclass of: SO_0000673
so part of: SJ05684_RS27435
location: join(59501..59993,59993..60561)
location: region:59501-60561:1
so has part: feature:59501-59993:1:exon
so has part: feature:59993-60561:1:exon

WP_086018031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59501-59993:1:exon

position:59993:1
position: 59993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59993-60561:1:exon

SJ05684_RS27440
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27440
old locus tag: SJ05684_a37680
pseudo: true
so part of: sequence
location: complement(<60580..61260)
location: region:60580-61260:-1
so has part: feature:60580-61260:-1:exon
subclass of: SO_0000010

position:60580:-1
position: 60580
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:61260:-1
position: 61260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60580-61260:-1:exon

SJ05684_RS27440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27440
old locus tag: SJ05684_a37680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989420.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3991 domain-containing protein
SIO_010081: SJ05684_RS27440
subclass of: SO_0000673
so part of: SJ05684_RS27440
location: complement(<60580..61260)
location: region:60580-61260:-1
so has part: feature:60580-61260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60580-61260:-1:exon

SJ05684_RS30135
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30135
old locus tag: SJ05684_a37690
so part of: sequence
location: complement(61257..61466)
location: region:61257-61466:-1
so has part: feature:61257-61466:-1:exon
subclass of: SO_0000010

position:61257:-1
position: 61257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61466:-1
position: 61466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61257-61466:-1:exon

SJ05684_RS30135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30135
old locus tag: SJ05684_a37690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSSHGRLIEPACASGVPLASGRPQGRLRRGRVLHDPTIASRALAAFALRGWWKCAREATGKQGKEEEA
SIO_010081: SJ05684_RS30135
subclass of: SO_0000673
so part of: SJ05684_RS30135
location: complement(61257..61466)
location: region:61257-61466:-1
so has part: feature:61257-61466:-1:exon

WP_014330963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61257-61466:-1:exon

SJ05684_RS30140
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30140
old locus tag: SJ05684_a37700
so part of: sequence
location: complement(61438..61614)
location: region:61438-61614:-1
so has part: feature:61438-61614:-1:exon
subclass of: SO_0000010

position:61438:-1
position: 61438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61614:-1
position: 61614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61438-61614:-1:exon

SJ05684_RS30140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30140
old locus tag: SJ05684_a37700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHDLSLAQSHAFQLSRDLMVPVTLFSVGGEYGVLPSDEIDADDDLEIVHEFFPWPAH
SIO_010081: SJ05684_RS30140
subclass of: SO_0000673
so part of: SJ05684_RS30140
location: complement(61438..61614)
location: region:61438-61614:-1
so has part: feature:61438-61614:-1:exon

WP_014330964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61438-61614:-1:exon

SJ05684_RS27450
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27450
old locus tag: SJ05684_a37720
so part of: sequence
location: complement(61901..62899)
location: region:61901-62899:-1
so has part: feature:61901-62899:-1:exon
subclass of: SO_0000010

position:61901:-1
position: 61901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62899:-1
position: 62899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61901-62899:-1:exon

SJ05684_RS27450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27450
old locus tag: SJ05684_a37720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MRCVWQVLEGSLPYRALSKYEVERADAGAMPAHDASALLSTSVEPLRHGSAGQDRHYIVGRFSAWEGKCRSALKLGFDDAPDAFVLYLPSTNAPEIRAGTQSFPTTRATGFLEDLAYFDELTPHEHSNHIGLSFEKAAMVQQVSELLDGPVTTDLEFDRIVDLTSEKGLRLAALGHLVWSCLNLSEADRLSPAAIERLFQATMIALLEVAPNSYMPRLEQSLSPAVSWQVKRTIEYMHSNLAQSMTAALIAAETGTSVRALQAAFQRFKGTTPLGYLRTIRLEAARRALLGDDGSRLISDAARNGGFTHMGRFAAAYYQAFGETPSDTLRMR
SIO_010081: SJ05684_RS27450
subclass of: SO_0000673
so part of: SJ05684_RS27450
location: complement(61901..62899)
location: region:61901-62899:-1
so has part: feature:61901-62899:-1:exon

WP_244938039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61901-62899:-1:exon

SJ05684_RS27455
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27455
old locus tag: SJ05684_a37730
so part of: sequence
location: complement(62945..63145)
location: region:62945-63145:-1
so has part: feature:62945-63145:-1:exon
subclass of: SO_0000010

position:62945:-1
position: 62945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63145:-1
position: 63145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62945-63145:-1:exon

SJ05684_RS27455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27455
old locus tag: SJ05684_a37730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330966.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MKEWTLSPLEKTCLRWISRGRTVAEIASLEGKSVADIEGYLQRALAALEVRSTEEAIAKANLSEPE
SIO_010081: SJ05684_RS27455
subclass of: SO_0000673
so part of: SJ05684_RS27455
location: complement(62945..63145)
location: region:62945-63145:-1
so has part: feature:62945-63145:-1:exon

WP_014330966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62945-63145:-1:exon

SJ05684_RS27460
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27460
old locus tag: SJ05684_a37740
so part of: sequence
location: complement(63538..64341)
location: region:63538-64341:-1
so has part: feature:63538-64341:-1:exon
subclass of: SO_0000010

position:63538:-1
position: 63538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64341:-1
position: 64341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63538-64341:-1:exon

SJ05684_RS27460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27460
old locus tag: SJ05684_a37740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017491380.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MNQAAAPISQSDDIVAIRGLRKSYSTLEVLKGIDISVKRGEVVVILGPSGSGKSTMLRCVNFLENFDQGTITVEGRPVGYKMVNGTRRPVSEVDNASLRQHVGMVFQSYNLFPHRTVLQNVMMGPVKVKGMDNSKARDIAMKLLAKVGMEHKADAYPGRLSGGQQQRVAIARALAMEPSVMLFDEVTSALDPELVGEVLKVMRELAEEGMTMIVVTHEMGFARGVADRVVFMDGGVVVEQGPPEEIMTNPQTDRFRGFLSRHLSHEG
SIO_010081: SJ05684_RS27460
subclass of: SO_0000673
so part of: SJ05684_RS27460
location: complement(63538..64341)
location: region:63538-64341:-1
so has part: feature:63538-64341:-1:exon

WP_014857732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63538-64341:-1:exon

SJ05684_RS27465
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27465
old locus tag: SJ05684_a37750
so part of: sequence
location: complement(64352..64999)
location: region:64352-64999:-1
so has part: feature:64352-64999:-1:exon
subclass of: SO_0000010

position:64352:-1
position: 64352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64999:-1
position: 64999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64352-64999:-1:exon

SJ05684_RS27465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27465
old locus tag: SJ05684_a37750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273724.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MFPVLQSNLPYLLQGAVYTVILSAIVVSCGTALGVGIGVLASVGGAILRSIITAYIFLFRGVPVLVIMFLGFYSFPALGLRLDAYTAVAISMIVYVGAFVAEATRGAIAGVPTGQTEAAKSLGMRKGKMMREIVLPQAMRLVIAPVLNISLMAIKQTSYASIVGAWELSFAAREVVERTLAAFQIFLGVMLIYFIICYPLSLAARALDKRLAFDS
SIO_010081: SJ05684_RS27465
subclass of: SO_0000673
so part of: SJ05684_RS27465
location: complement(64352..64999)
location: region:64352-64999:-1
so has part: feature:64352-64999:-1:exon

WP_014857731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64352-64999:-1:exon

SJ05684_RS27470
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27470
old locus tag: SJ05684_a37760
so part of: sequence
location: complement(64999..65658)
location: region:64999-65658:-1
so has part: feature:64999-65658:-1:exon
subclass of: SO_0000010

position:65658:-1
position: 65658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64999-65658:-1:exon

SJ05684_RS27470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27470
old locus tag: SJ05684_a37760
function: ABC-type amino acid transport system, permease component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330968.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MDAFVIFFTRYLPAFADGFLITAGVAALAAPAALIWAIVLIIPRLAQWTWASRLVDAYVEVMRNSPLLVQMYLLYFGLPLLGLFWSSIVCGVIAIASQHGAFLSEILRSGIQSLSQRQWEAGSAIGMRRFAVIRLVILPQAFIKVLPALGNQLIVLVKDTSLVSAIGVMDLTLTGKMTIERSGASFEAFIAVAFFYLILTSTLGLVLRIIEVRAARRYG
SIO_010081: SJ05684_RS27470
subclass of: SO_0000673
so part of: SJ05684_RS27470
location: complement(64999..65658)
location: region:64999-65658:-1
so has part: feature:64999-65658:-1:exon

WP_014330968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64999-65658:-1:exon

SJ05684_RS27475
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27475
old locus tag: SJ05684_a37770
so part of: sequence
location: complement(65695..66543)
location: region:65695-66543:-1
so has part: feature:65695-66543:-1:exon
subclass of: SO_0000010

position:65695:-1
position: 65695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66543:-1
position: 66543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65695-66543:-1:exon

SJ05684_RS27475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27475
old locus tag: SJ05684_a37770
function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKNGFLSKLRSVFAGALATMVVAGAAHAQETSRLDELLSRGKLIVGVSSESPPFGFVDEKGELVGFDIDIAKLIAKATFGDETKVEFVRQSAAQRWPNAQNGTIDFGAQTTSIYADRAQKVAFTRSYIDGGVVMIVRKDAPFQKLADFNKSDVTIANLTTPTQEERAKRLFPSAQIATFDGIAAQFNAVKLGRAQGAQLDGPVAAWYVKQNPDMRVIEERLTDVVNTGIFMKPGDFRLWQYLDLTVSEMTGGYLFADYSKIYEKWFGTKPLNVKWYLNQPQK
SIO_010081: SJ05684_RS27475
subclass of: SO_0000673
so part of: SJ05684_RS27475
location: complement(65695..66543)
location: region:65695-66543:-1
so has part: feature:65695-66543:-1:exon

WP_014330969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65695-66543:-1:exon

SJ05684_RS27480
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27480
old locus tag: SJ05684_a37780
so part of: sequence
location: complement(66580..67590)
location: region:66580-67590:-1
so has part: feature:66580-67590:-1:exon
subclass of: SO_0000010

position:66580:-1
position: 66580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67590:-1
position: 67590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66580-67590:-1:exon

SJ05684_RS27480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27480
old locus tag: SJ05684_a37780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4392 domain-containing protein
translation: MTTSNFAAMDDRLDRLVNLDLGGRGVEHLSAATRLLLGASPVGAAADKLAALNHEDVVLVTTGSVSRAWISPEIGENDGPAGLAAVVRAISLSRKALCVVLAEATLIEPIGKLMTTAGLTVVPVEQAKIAARDKSLAVVSLLPFTTKDEDAPAEACRILDELNPVLLFSTERVGRNADGIYCSMRGVDYGMDRARIDYVFDEANKRGVLTVAVGDGGNEIGMGAIKEAVHKHVRFGDARPEGGAGIGAMTGSDILVTAAVSNWGCYAIVGALAARLKDIRLLHKPEMEATLLKRGVDIGLINSVDGLIDANVDGIPLSTHLAISEIIEGIVRPALR
SIO_010081: SJ05684_RS27480
subclass of: SO_0000673
so part of: SJ05684_RS27480
location: complement(66580..67590)
location: region:66580-67590:-1
so has part: feature:66580-67590:-1:exon

WP_014330970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66580-67590:-1:exon

SJ05684_RS30750
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30750
old locus tag: SJ05684_a37790
so part of: sequence
location: complement(67587..67946)
location: region:67587-67946:-1
so has part: feature:67587-67946:-1:exon
subclass of: SO_0000010

position:67587:-1
position: 67587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67946:-1
position: 67946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67587-67946:-1:exon

SJ05684_RS30750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30750
old locus tag: SJ05684_a37790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAGVVMRSDLGPMVNEDAVLAIILERASISADALNVVPCEATAALGMLLLADHGILTVNTHGQPGARVSLRLKPTLDALASVGGVSAVVDAVDDCITKVADIVTDENAMKTLILGDFA
SIO_010081: SJ05684_RS30750
subclass of: SO_0000673
so part of: SJ05684_RS30750
location: complement(67587..67946)
location: region:67587-67946:-1
so has part: feature:67587-67946:-1:exon

WP_223843495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67587-67946:-1:exon

SJ05684_RS30755
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30755
old locus tag: SJ05684_a37800
so part of: sequence
location: 68004..68882
location: region:68004-68882:1
so has part: feature:68004-68882:1:exon
subclass of: SO_0000010

position:68004:1
position: 68004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68882:1
position: 68882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68004-68882:1:exon

SJ05684_RS30755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30755
old locus tag: SJ05684_a37800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIEFLKRAKHGRRDWSTSFHTILGSFGACGHDETGTADQHASARPRKSGLIAIGDREIRTECKSFLPSVQYRAKASPVGLIEKDNGSSFVGFLDHGYRKSVIEPSQSARNGGYDNQTTIRNVSAPIFVRGNFLQPDPGECTSTYDRRVRSIAGRHDRKYRLSAGECGDRRYDPGAGAIENGTSVITSSAKMFDGDRAELLGIKTRTNPFLAICVQVFRTNWKIALVSCENADRSRSKCLDALCRDGLSMAKAFSLLDTGFDDRATRETDDRIDLITEGVPASCLTFALLRG
SIO_010081: SJ05684_RS30755
subclass of: SO_0000673
so part of: SJ05684_RS30755
location: 68004..68882
location: region:68004-68882:1
so has part: feature:68004-68882:1:exon

WP_223843494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68004-68882:1:exon

SJ05684_RS27490
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27490
old locus tag: SJ05684_a37810
so part of: sequence
location: complement(68885..70018)
location: region:68885-70018:-1
so has part: feature:68885-70018:-1:exon
subclass of: SO_0000010

position:68885:-1
position: 68885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70018:-1
position: 70018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68885-70018:-1:exon

SJ05684_RS27490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27490
old locus tag: SJ05684_a37810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4392 domain-containing protein
translation: MPKTLSINSKLTTADIERLCVFGERFDRLMTLEVRPLTGGLPAGIVVPTYLACRAVQGEPSSTLAARKLLAAIRPGSDVIVATGAGVAPKLPLGETDGPPGAVALARSLALGFGANVTLVAQDEHMPAVDACVRVIEDVAQSQGSITTAIFPKGEAEGLAAATDIFDRLKPTAVIFVERDGPNEAGHYHGIRGDRRPPGTVADVYRLAYEAKQRNVLTVGIGDGGNEIGFGKIREAVAALLPRGGRSQPDETGVVTITETDVLVSASVSNWGAYAVSGALAIALDDENLAHSGDREHAFIVACIAAGALDGATSRPALAVDGIDWRGHSGVSELMRSIAISATSKSELKNAATASSEADLPIFSVLDDAQAKGGYHL
SIO_010081: SJ05684_RS27490
subclass of: SO_0000673
so part of: SJ05684_RS27490
location: complement(68885..70018)
location: region:68885-70018:-1
so has part: feature:68885-70018:-1:exon

WP_014330972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68885-70018:-1:exon

SJ05684_RS27495
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27495
old locus tag: SJ05684_a37820
so part of: sequence
location: complement(70042..71547)
location: region:70042-71547:-1
so has part: feature:70042-71547:-1:exon
subclass of: SO_0000010

position:70042:-1
position: 70042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71547:-1
position: 71547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70042-71547:-1:exon

SJ05684_RS27495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27495
old locus tag: SJ05684_a37820
function: NAD-dependent aldehyde dehydrogenases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330973.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MSQTAKVRNDTAEVILPTAGLSGQLINGAWVKPVSGAMLDIINPCRSSVITTIGAADREDVDAAVAAAKAAFPSWRRLASRTRGALLTELANRVSAHSEEIARILAAETGNALRTQSRPEVMSSIEVLRYYGGTVAEQKGETLPLGPGLFSYTTREPLGVVGAIIPWNSPLVLAAVKIGMALGTGNTLVLKPAEDAPLAVIRVAELAADLFPNGVFNVVTGVGEVAGAALSGHPDVAKISFTGSVEVGKLVAHAAADRIARATLELGGKSPTIVYPDAATDDRIDGLAANIINAMRFARQGQSCTAGSRLYVHQDVFEPVLKKVVEKLAVMKIGDALDEETDIGAIINEERYSAVREFISEAVNSGAEVVTGEVPPAAGRNVGFFPKPTVLKGLTNDWRIVQEEVFGPVLVAIPWTSEVEVIEWANNTHYGLAAYIFANDLTTALNAASRIDAGWLQINRAGGQIPGMSYGGIKQSGIGSEYSIEGALEAYTARKSVTVNL
SIO_010081: SJ05684_RS27495
subclass of: SO_0000673
so part of: SJ05684_RS27495
location: complement(70042..71547)
location: region:70042-71547:-1
so has part: feature:70042-71547:-1:exon

WP_014330973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70042-71547:-1:exon

SJ05684_RS27500
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27500
old locus tag: SJ05684_a37830
so part of: sequence
location: complement(71576..72469)
location: region:71576-72469:-1
so has part: feature:71576-72469:-1:exon
subclass of: SO_0000010

position:71576:-1
position: 71576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72469:-1
position: 72469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71576-72469:-1:exon

SJ05684_RS27500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27500
old locus tag: SJ05684_a37830
EC number: 1.1.-.-
function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273720.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MTTVAFIGVGRMGSRMALRLLDAGHVVHVFDPNTAATAELAVKGAVVEASPSAAAAPAMFVLSSLPSPATLRDAITGENGILKKVAAGATVIDFSTVDASTTKAIAAQCEAKGVHFMDAPVSGGVAGASAGTLLVMAGGSQDVLDAARPVLGPIAGRIVHCGPVGSGQLTKLAHNLLTAINTVALGEVLSASVKSGANLSVLTEVLSGGLAGSKMLDYLPKTLFTEERPANFALDLMHKDISLCLEEFSAYPMPLGQMVRQIYNMARAEGLGGKDSTSVAEVFENLLKVELRLPASA
SIO_010081: SJ05684_RS27500
subclass of: SO_0000673
so part of: SJ05684_RS27500
location: complement(71576..72469)
location: region:71576-72469:-1
so has part: feature:71576-72469:-1:exon

WP_014330974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71576-72469:-1:exon

SJ05684_RS27505
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27505
so part of: sequence
location: 72608..73591
location: region:72608-73591:1
so has part: feature:72608-73591:1:exon
subclass of: SO_0000010

position:72608:1
position: 72608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73591:1
position: 73591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72608-73591:1:exon

SJ05684_RS27505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273721.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MKEKATLDNTTCKKNLRTAFIMLNLSRLQLLHELSVLGTISAVARSLNLTRPAVSQQLSLLEKELGLVLFERSGRGVRWTSAGERLLAGIGGILQAVNEVEADLARTAQTVTGDLRIAAFGSAAATIIPQAITQLAKQHPSLEIFFNEMEPGDGLKATATKQVDIAIVDDLTGTENFAHQLDFQPLYIDPFKAVVSVDHRLAGTGRKSVELWELAQEKWALNQSAIGYQTFIVNACHAEGYTPQIMSSCRNIAATLEFVRTGSFVTVLPGLATHNILLDPDFRCLDLRPVTQRRLFSAFAKGSKARPAISAALEAFEHACSIFIDHR
SIO_010081: SJ05684_RS27505
subclass of: SO_0000673
so part of: SJ05684_RS27505
location: 72608..73591
location: region:72608-73591:1
so has part: feature:72608-73591:1:exon

WP_014857727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72608-73591:1:exon

SJ05684_RS27510
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27510
pseudo: true
so part of: sequence
location: complement(<73652..>74137)
location: region:73652-74137:-1
so has part: feature:73652-74137:-1:exon
subclass of: SO_0000010

position:73652:-1
position: 73652
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:74137:-1
position: 74137
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73652-74137:-1:exon

SJ05684_RS27510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611730.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: SJ05684_RS27510
subclass of: SO_0000673
so part of: SJ05684_RS27510
location: complement(<73652..>74137)
location: region:73652-74137:-1
so has part: feature:73652-74137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73652-74137:-1:exon

SJ05684_RS27515
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27515
old locus tag: SJ05684_a37850
pseudo: true
so part of: sequence
location: <74236..74514
location: region:74236-74514:1
so has part: feature:74236-74514:1:exon
subclass of: SO_0000010

position:74236:1
position: 74236
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:74514:1
position: 74514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74236-74514:1:exon

SJ05684_RS27515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27515
old locus tag: SJ05684_a37850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012706351.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FCD domain-containing protein
SIO_010081: SJ05684_RS27515
subclass of: SO_0000673
so part of: SJ05684_RS27515
location: <74236..74514
location: region:74236-74514:1
so has part: feature:74236-74514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74236-74514:1:exon

SJ05684_RS27525
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27525
old locus tag: SJ05684_a37870
so part of: sequence
location: complement(74732..75448)
location: region:74732-75448:-1
so has part: feature:74732-75448:-1:exon
subclass of: SO_0000010

position:74732:-1
position: 74732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75448:-1
position: 75448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74732-75448:-1:exon

SJ05684_RS27525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27525
old locus tag: SJ05684_a37870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MSEVARDPLYRRHRYPAEIIAHAVWLYFRFPLSLRMVEDMLASRGIIVTHQTIRSWAEKFGRHFAREIKRRSAGCLGDKWHLDECVVAINGKKQWLWRAVDQDGFVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMPGVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHQDLRNAAMQIWSKIACVAAA
SIO_010081: SJ05684_RS27525
subclass of: SO_0000673
so part of: SJ05684_RS27525
location: complement(74732..75448)
location: region:74732-75448:-1
so has part: feature:74732-75448:-1:exon

WP_109023434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74732-75448:-1:exon

SJ05684_RS27530
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27530
old locus tag: SJ05684_a37880
so part of: sequence
location: 75798..77543
location: region:75798-77543:1
so has part: feature:75798-77543:1:exon
subclass of: SO_0000010

position:75798:1
position: 75798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77543:1
position: 77543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75798-77543:1:exon

SJ05684_RS27530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27530
old locus tag: SJ05684_a37880
function: Leucine-rich repeat (LRR) protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330979.1
GO function: GO:0004842 - ubiquitin-protein transferase activity [Evidence IEA]
GO process: GO:0016567 - protein ubiquitination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NEL-type E3 ubiquitin ligase domain-containing protein
translation: MNIGDAQQSAGSSPATSEEGEQESYLSGFARAVADLVEAMTGYRTPASARAQILDNWVAEEGQGEAENRRQGRTRIRGSDNTGSHSLDLSSLSLTALPAALPPRLLELRARHNELSSLPASFPPGLQHLLISHNRLTSLPDALPATLSRLEVADNSLTSLPANLPAGLEILNASDNRLTSLPDALPSRLTSLAVSGNQLTDLPDSLPSGLIELDVSSNQLANLPDPLPSTLQSLNLSGNRLTGLPEDLLEGRVPNLSLSYPHLENLEFGDNPLPDDVLANLAAAEAPPQLAQQSLYEAAAHWLADDPATLAEWQHFADEPGAQDYAQFLERLRGTVNYGNDEFRQRVADDLRQTAANPRLREQFFAQASDANASCEDRVTLHWNGMQTARLNADVEGGVYDDRLGELIQRGRVAFRLEALDEIARDRVNSLLSLDPNIDDVEVYLAYQHRLREPLELSHVAPDMRFLAVSHVSEDDATEALDLIREREANQFTDYMATRWQPWETVLRRIAPDEHAAMQDRLVEAMGEEFQSRLDQRLAEHGLVGDVDAERVLGAQVRNQIAGEIKGEVMNRLLSERGLEQ
SIO_010081: SJ05684_RS27530
subclass of: SO_0000673
so part of: SJ05684_RS27530
location: 75798..77543
location: region:75798-77543:1
so has part: feature:75798-77543:1:exon

WP_014330979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75798-77543:1:exon

SJ05684_RS27535
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27535
pseudo: true
so part of: sequence
location: complement(77828..78538)
location: region:77828-78538:-1
so has part: feature:77828-78538:-1:exon
subclass of: SO_0000010

position:77828:-1
position: 77828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78538:-1
position: 78538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77828-78538:-1:exon

SJ05684_RS27535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27535
subclass of: SO_0000673
so part of: SJ05684_RS27535
location: complement(77828..78538)
location: region:77828-78538:-1
so has part: feature:77828-78538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77828-78538:-1:exon

SJ05684_RS27540
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27540
old locus tag: SJ05684_a37910
pseudo: true
so part of: sequence
location: <78601..79044
location: region:78601-79044:1
so has part: feature:78601-79044:1:exon
subclass of: SO_0000010

position:78601:1
position: 78601
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:79044:1
position: 79044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78601-79044:1:exon

SJ05684_RS27540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27540
old locus tag: SJ05684_a37910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523548.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: restriction endonuclease
SIO_010081: SJ05684_RS27540
subclass of: SO_0000673
so part of: SJ05684_RS27540
location: <78601..79044
location: region:78601-79044:1
so has part: feature:78601-79044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78601-79044:1:exon

SJ05684_RS27545
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27545
old locus tag: SJ05684_a37920
pseudo: true
so part of: sequence
location: 79041..>79469
location: region:79041-79469:1
so has part: feature:79041-79469:1:exon
subclass of: SO_0000010

position:79041:1
position: 79041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79469:1
position: 79469
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79041-79469:1:exon

SJ05684_RS27545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27545
old locus tag: SJ05684_a37920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019197490.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: P-loop NTPase fold protein
SIO_010081: SJ05684_RS27545
subclass of: SO_0000673
so part of: SJ05684_RS27545
location: 79041..>79469
location: region:79041-79469:1
so has part: feature:79041-79469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79041-79469:1:exon

SJ05684_RS27550
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27550
so part of: sequence
location: complement(79552..79920)
location: region:79552-79920:-1
so has part: feature:79552-79920:-1:exon
subclass of: SO_0000010

position:79552:-1
position: 79552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79920:-1
position: 79920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79552-79920:-1:exon

SJ05684_RS27550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNWMAPSEIAGLLLMRRVPKAFPAYYERSGYRVLGVIIPDLDDVLRMETSKLPSRASTLLPLHLRPALLAGVAIVQRAGPEMLHMLRSHMMGENKARFGSAIDEILDCARQSRTSSQLHLI
SIO_010081: SJ05684_RS27550
subclass of: SO_0000673
so part of: SJ05684_RS27550
location: complement(79552..79920)
location: region:79552-79920:-1
so has part: feature:79552-79920:-1:exon

WP_014857718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79552-79920:-1:exon

SJ05684_RS27555
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27555
so part of: sequence
location: complement(79978..81038)
location: region:79978-81038:-1
so has part: feature:79978-81038:-1:exon
subclass of: SO_0000010

position:79978:-1
position: 79978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81038:-1
position: 81038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79978-81038:-1:exon

SJ05684_RS27555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS27555
subclass of: SO_0000673
so part of: SJ05684_RS27555
location: complement(join(79978..80546,80546..81038))
location: region:79978-81038:-1
so has part: feature:80546-81038:-1:exon
so has part: feature:79978-80546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80546-81038:-1:exon

position:80546:-1
position: 80546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79978-80546:-1:exon

SJ05684_RS27560
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27560
old locus tag: SJ05684_a37950
so part of: sequence
location: 81252..81968
location: region:81252-81968:1
so has part: feature:81252-81968:1:exon
subclass of: SO_0000010

position:81252:1
position: 81252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81968:1
position: 81968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81252-81968:1:exon

SJ05684_RS27560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27560
old locus tag: SJ05684_a37950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MSEVARDPLYRRHRYPAEIIAHAVWLYFRFPLSLRMVEDMLASRGIIVTHQTIRSWAEKFGRHFAREIKRRSAGCLGDKWHLDECVVAINGKKQWLWRAVDQDGFVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMPGVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHQDLRNAAMQIWSKIACVAAA
SIO_010081: SJ05684_RS27560
subclass of: SO_0000673
so part of: SJ05684_RS27560
location: 81252..81968
location: region:81252-81968:1
so has part: feature:81252-81968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81252-81968:1:exon

SJ05684_RS27565
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27565
so part of: sequence
location: complement(82323..83294)
location: region:82323-83294:-1
so has part: feature:82323-83294:-1:exon
subclass of: SO_0000010

position:82323:-1
position: 82323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83294:-1
position: 83294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82323-83294:-1:exon

SJ05684_RS27565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014497925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIDPRNAAESQVGVHDLLPRPDPADRRPDKLSAQTSSPAHPPNQASFEQQLADLHLIHPTPDSVSLAADPGTANFSNAPNEVAPEPGCYPAESFVRARAQLAAKLTGAPLDVLRNEIELAYRQSGRWSPATAVGDGSIDRGRIFDDVAGSSYVILRRFQNQDSDCNPRIENDTSAISHVRSTARDHFSHGDPLERYPMDRARQAGWHMRGKTTASPFVSLVEDPSKLVVSRDHWARAIANNASTLHTYTVPKSSVWTPDDVLSSIGLGMNVEDQDNIDADVDLMCSLGRTPTRETERLFLGSNLDDYRTDSEANPYRRDGNE
SIO_010081: SJ05684_RS27565
subclass of: SO_0000673
so part of: SJ05684_RS27565
location: complement(82323..83294)
location: region:82323-83294:-1
so has part: feature:82323-83294:-1:exon

WP_015633430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82323-83294:-1:exon

SJ05684_RS27570
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27570
old locus tag: SJ05684_a37980
so part of: sequence
location: complement(83382..84353)
location: region:83382-84353:-1
so has part: feature:83382-84353:-1:exon
subclass of: SO_0000010

position:83382:-1
position: 83382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84353:-1
position: 84353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83382-84353:-1:exon

SJ05684_RS27570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27570
old locus tag: SJ05684_a37980
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011510441.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MEKITTLGLDLAKSIFQVHGVAEDGHVVVRRALRRSQMLEFFRSLEPCLVGLEACASAHHWANAISQFGHTVRMIPPAYVKAYVKRNKTDAADAEAICEAVTRPTMRFVPIKTPAEQAAGMVLKTRELFVRQRSQTANAMRAHMAELGIIAATGMTSIAKLIVILRDDDDTRLPSAARAALLEMVAQIEMLSARIEALDAKIVTAVKADNTARRLTSIPGVGPIIAATVRATIQDPAAFPIGRDLAAWIGITPKTHSSSGKERLGRISKRGNKQLRTLLIVGATSILKQARRGVTLPSWIVSLMARRPYKVAAVAKRHPAPRK
SIO_010081: SJ05684_RS27570
subclass of: SO_0000673
so part of: SJ05684_RS27570
location: complement(83382..84353)
location: region:83382-84353:-1
so has part: feature:83382-84353:-1:exon

WP_015633429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83382-84353:-1:exon

SJ05684_RS29855
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29855
pseudo: true
so part of: sequence
location: complement(84387..>84686)
location: region:84387-84686:-1
so has part: feature:84387-84686:-1:exon
subclass of: SO_0000010

position:84387:-1
position: 84387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84686:-1
position: 84686
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84387-84686:-1:exon

SJ05684_RS29855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012382967.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS29855
subclass of: SO_0000673
so part of: SJ05684_RS29855
location: complement(84387..>84686)
location: region:84387-84686:-1
so has part: feature:84387-84686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84387-84686:-1:exon

SJ05684_RS27585
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27585
old locus tag: SJ05684_a38000
so part of: sequence
location: 84770..85792
location: region:84770-85792:1
so has part: feature:84770-85792:1:exon
subclass of: SO_0000010

position:84770:1
position: 84770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85792:1
position: 85792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84770-85792:1:exon

SJ05684_RS27585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27585
old locus tag: SJ05684_a38000
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971054.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQITTVGLDLAKSVFQAHGVDETGATVLVKRLHRKQMLPFFSKLPPCLIGMEACGTAHHWARTLAAMGHEVRLIPPSYVKPYVKRGKSDALDAEAICEAVQRPTMRFVPVKTVAQQSILMTHRARSLLVRQRTMVANALRAHLAELGLVANPGIANLAKLAQQALSGESSLPSYARTTLDILIRQILVFADEIAALDQQLLAWHADSEASRRLSAIPGLGIVTATAVAATVTDPEQFRSGRQFAAWLGLTPQQCSTGGKTQLGGISKQGDRYLRRLLVVGATAVIRHTKDKATPLANWIRKLLEKKPFRLVSVALANKLARIAWVVLTRKEAYRAHEMIA
SIO_010081: SJ05684_RS27585
subclass of: SO_0000673
so part of: SJ05684_RS27585
location: 84770..85792
location: region:84770-85792:1
so has part: feature:84770-85792:1:exon

WP_014328393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84770-85792:1:exon

SJ05684_RS27590
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27590
old locus tag: SJ05684_a38010
pseudo: true
so part of: sequence
location: complement(<86050..87447)
location: region:86050-87447:-1
so has part: feature:86050-87447:-1:exon
subclass of: SO_0000010

position:86050:-1
position: 86050
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:87447:-1
position: 87447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86050-87447:-1:exon

SJ05684_RS27590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27590
old locus tag: SJ05684_a38010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018010711.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISL3 family transposase
SIO_010081: SJ05684_RS27590
subclass of: SO_0000673
so part of: SJ05684_RS27590
location: complement(<86050..87447)
location: region:86050-87447:-1
so has part: feature:86050-87447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86050-87447:-1:exon

SJ05684_RS27595
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27595
old locus tag: SJ05684_a38020
pseudo: true
so part of: sequence
location: 87655..88678
location: region:87655-88678:1
so has part: feature:87655-88678:1:exon
subclass of: SO_0000010

position:87655:1
position: 87655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88678:1
position: 88678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87655-88678:1:exon

SJ05684_RS27595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27595
old locus tag: SJ05684_a38020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011907855.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: SJ05684_RS27595
subclass of: SO_0000673
so part of: SJ05684_RS27595
location: 87655..88678
location: region:87655-88678:1
so has part: feature:87655-88678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87655-88678:1:exon

SJ05684_RS27600
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS27600
old locus tag: SJ05684_a38030
so part of: sequence
location: complement(88777..89697)
location: region:88777-89697:-1
so has part: feature:88777-89697:-1:exon
subclass of: SO_0000010

position:88777:-1
position: 88777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89697:-1
position: 89697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88777-89697:-1:exon

SJ05684_RS27600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS27600
old locus tag: SJ05684_a38030
function: DNA replication protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014328473.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MRNAPAIDAATLSTLLNELRLPAIKVLWPDFAERADKEGWPAARFLSVIAEHELAERDRRRIERHLAEARLPPGKTLDSFAFDAVPMVSKAQVMAIAAGDSWLAKGANILLFGPPGGGKSHLAAAIGLALIENGWRVLFMRTTELVQKLQVARRELQLESAIAKLDKFDLLILDDLAYVTKDQAETSVLFELISARYERRSIMITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNVESYRRRSAMEAKRQRGRPASFATIRNAAEIDAARQSETNEALASDNHDDTVADNRDTRISSRLSR
SIO_010081: SJ05684_RS27600
subclass of: SO_0000673
so part of: SJ05684_RS27600
location: complement(88777..89697)
location: region:88777-89697:-1
so has part: feature:88777-89697:-1:exon

WP_014328473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88777-89697:-1:exon

SJ05684_RS27605
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS27605
old locus tag: SJ05684_a38040
so part of: sequence
location: complement(89694..91178)
location: region:89694-91178:-1
so has part: feature:89694-91178:-1:exon
subclass of: SO_0000010

position:89694:-1
position: 89694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91178:-1
position: 91178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89694-91178:-1:exon

SJ05684_RS27605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS27605
old locus tag: SJ05684_a38040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488953.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MRLFMKLRQEHRVEVAAAKASLSRATAYRIEKNAQLPSQVKKPRGRRRPDPLADIFDAEVVPLLKAAPGIRPVAVFDEMLRRHPELSEGVRRTMERRIRAWRAINGDEQEVIFRQVHEPGRLGLSDFTNMNELGITIAGQPLDHLLYHFRLAYSGFEHAHVVLGGESFVALAEGLQNALWFLGGAPLYHRSDSLSAAFRNLDADAKEDQTRRYAELCAHYRMTPTRNNKGIAHENGAIESPHGHLKNAIRDALLLRGTRDFDDLDGYRGFIDEIVSRRNARYGKRIDAERAALQPLPGTRTSDFEEVVVRVSRSGGFTLRKVFYTVPSRLIGHRLRVRLYDERLDLFIGGTHLMTLQRGRAHASGKHDQVVDYRHVIHSLRKKPMALLQLVYRDKLFPRQEYRRAFETLLDRLSDKQACKITVELLALAHDRGCERELAERLAKTLDAGELPDIIALRTFFAPDPAQLPTVNVRLASLQGYEALIDARHLEDAA
SIO_010081: SJ05684_RS27605
subclass of: SO_0000673
so part of: SJ05684_RS27605
location: complement(89694..91178)
location: region:89694-91178:-1
so has part: feature:89694-91178:-1:exon

WP_161623564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89694-91178:-1:exon

SJ05684_RS30145
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30145
pseudo: true
so part of: sequence
location: complement(91485..>91829)
location: region:91485-91829:-1
so has part: feature:91485-91829:-1:exon
subclass of: SO_0000010

position:91485:-1
position: 91485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91829:-1
position: 91829
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91485-91829:-1:exon

SJ05684_RS30145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30145
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS30145
subclass of: SO_0000673
so part of: SJ05684_RS30145
location: complement(91485..>91829)
location: region:91485-91829:-1
so has part: feature:91485-91829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91485-91829:-1:exon

SJ05684_RS30760
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30760
old locus tag: SJ05684_a38050
pseudo: true
so part of: sequence
location: 92823..97186
location: region:92823-97186:1
so has part: feature:92823-97186:1:exon
subclass of: SO_0000010

position:92823:1
position: 92823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97186:1
position: 97186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92823-97186:1:exon

SJ05684_RS30760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30760
old locus tag: SJ05684_a38050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633424.1
GO function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ulp1 family isopeptidase
SIO_010081: SJ05684_RS30760
subclass of: SO_0000673
so part of: SJ05684_RS30760
location: 92823..97186
location: region:92823-97186:1
so has part: feature:92823-97186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92823-97186:1:exon

SJ05684_RS29860
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29860
old locus tag: SJ05684_a38070
so part of: sequence
location: complement(97328..97774)
location: region:97328-97774:-1
so has part: feature:97328-97774:-1:exon
subclass of: SO_0000010

position:97328:-1
position: 97328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97774:-1
position: 97774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97328-97774:-1:exon

SJ05684_RS29860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29860
old locus tag: SJ05684_a38070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKADEAGQFEFQFAARDLDQMRAKLWCGKVTTARWLLCAAAGELRRVDRKQHSRRVVAKINRLAQMIIEFDRYLEINQSSMPNYAKRSLQGLPVSSSRAQSSANALVNRRMNKRRQMRWSPQGAQRVLQTRVAVLDGRLQDGRFSLAA
SIO_010081: SJ05684_RS29860
subclass of: SO_0000673
so part of: SJ05684_RS29860
location: complement(97328..97774)
location: region:97328-97774:-1
so has part: feature:97328-97774:-1:exon

WP_015633423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97328-97774:-1:exon

SJ05684_RS30875
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30875
old locus tag: SJ05684_a38080
so part of: sequence
location: complement(97771..97899)
location: region:97771-97899:-1
so has part: feature:97771-97899:-1:exon
subclass of: SO_0000010

position:97771:-1
position: 97771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97899:-1
position: 97899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97771-97899:-1:exon

SJ05684_RS30875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30875
old locus tag: SJ05684_a38080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSDGDPSLADAVRHAANSDAVHILDWFHGSMRVQHLLADRW
SIO_010081: SJ05684_RS30875
subclass of: SO_0000673
so part of: SJ05684_RS30875
location: complement(97771..97899)
location: region:97771-97899:-1
so has part: feature:97771-97899:-1:exon

WP_280109819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97771-97899:-1:exon

SJ05684_RS30765
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30765
so part of: sequence
location: complement(98483..98695)
location: region:98483-98695:-1
so has part: feature:98483-98695:-1:exon
subclass of: SO_0000010

position:98483:-1
position: 98483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98695:-1
position: 98695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98483-98695:-1:exon

SJ05684_RS30765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKANRITRLTSAACEQIQARMLEACRQIASDHGLVIESTGWRGLKPGFSFETSIPHQHSHARWQAHQSG
SIO_010081: SJ05684_RS30765
subclass of: SO_0000673
so part of: SJ05684_RS30765
location: complement(98483..98695)
location: region:98483-98695:-1
so has part: feature:98483-98695:-1:exon

WP_223843498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98483-98695:-1:exon

SJ05684_RS27645
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27645
so part of: sequence
location: 98922..99728
location: region:98922-99728:1
so has part: feature:98922-99728:1:exon
subclass of: SO_0000010

position:98922:1
position: 98922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99728:1
position: 99728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98922-99728:1:exon

SJ05684_RS27645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27645
inference: COORDINATES: protein motif:HMM:NF004860.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSNRINGGAAKGSPTGYVRTQEDHDLFRQAANEAGSLSSAALVSARAPIWSSHAPYGSFSRDGYSWNNDVWGPRPGPQTISVSGVNRWSVWSDQPNTPGIKSYPHVAFNIGKPLSSINTLSSSFNQEVPTGGAWDVAYDIWDSSNKHEIMLWTNYTGNSDGSGNVKPISYHYAPSGAAIPVYSNVNVGGATWNVFEGEGPDGHKVISLLRTSKTNSGTVDIKSILQWIKSKGYFGDIEVGSVQYGVEITSSPGGKNFNFNNWSVTSK
SIO_010081: SJ05684_RS27645
subclass of: SO_0000673
so part of: SJ05684_RS27645
location: 98922..99728
location: region:98922-99728:1
so has part: feature:98922-99728:1:exon

WP_015633421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98922-99728:1:exon

SJ05684_RS27655
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27655
old locus tag: SJ05684_a38110
pseudo: true
so part of: sequence
location: complement(100112..100823)
location: region:100112-100823:-1
so has part: feature:100112-100823:-1:exon
subclass of: SO_0000010

position:100112:-1
position: 100112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100823:-1
position: 100823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100112-100823:-1:exon

SJ05684_RS27655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27655
old locus tag: SJ05684_a38110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27655
subclass of: SO_0000673
so part of: SJ05684_RS27655
location: complement(100112..100823)
location: region:100112-100823:-1
so has part: feature:100112-100823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100112-100823:-1:exon

SJ05684_RS27660
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27660
old locus tag: SJ05684_a38120
so part of: sequence
location: 101171..101635
location: region:101171-101635:1
so has part: feature:101171-101635:1:exon
subclass of: SO_0000010

position:101171:1
position: 101171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101635:1
position: 101635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101171-101635:1:exon

SJ05684_RS27660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27660
old locus tag: SJ05684_a38120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019860319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin
translation: MSKPADKPNQPAETVEFQAIDPSKAADQFRAVAEKGIEQSQEALAKFQFGVEETQKVLKSTFETARSVGNELSLTTIAALRANVEVDFSHLEALSGAKSLSEIIELQTKFLGKRVEMGVEQAKDFRALTTKAVTDISKLAKDVFDKSLRDLKAA
SIO_010081: SJ05684_RS27660
subclass of: SO_0000673
so part of: SJ05684_RS27660
location: 101171..101635
location: region:101171-101635:1
so has part: feature:101171-101635:1:exon

WP_034859947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101171-101635:1:exon

SJ05684_RS27665
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27665
old locus tag: SJ05684_a38130
pseudo: true
so part of: sequence
location: 101943..102694
location: region:101943-102694:1
so has part: feature:101943-102694:1:exon
subclass of: SO_0000010

position:101943:1
position: 101943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102694:1
position: 102694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101943-102694:1:exon

SJ05684_RS27665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27665
old locus tag: SJ05684_a38130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27665
subclass of: SO_0000673
so part of: SJ05684_RS27665
location: 101943..102694
location: region:101943-102694:1
so has part: feature:101943-102694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101943-102694:1:exon

SJ05684_RS27670
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27670
old locus tag: SJ05684_a38140
so part of: sequence
location: complement(102865..105045)
location: region:102865-105045:-1
so has part: feature:102865-105045:-1:exon
subclass of: SO_0000010

position:102865:-1
position: 102865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105045:-1
position: 105045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102865-105045:-1:exon

SJ05684_RS27670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27670
old locus tag: SJ05684_a38140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875266.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolyl oligopeptidase family serine peptidase
translation: MLTTFLNNLMMAMTMVTMTAPAQPQMTTVATAIDSNPNKASKDASDPRAYLNEIDGDKAMTWVEAHNLSTVDKLSKDPRYSEYQADALTILQATDRIASPSFARNGMIDNFWQDGTHVQGLWRRTTWESYRSGNPQWRTILDVDALSKAEGKTWVFEGGDCLPPTSNLCLIRLSDGGKDADVVREFDIAKGEFVKEGFVLPEGKQSVTWVDENTIYVTREWTLGEVTSSGYAYVTKVVKRGQSLDQAVEIFRGQKKDVSAERGVLRDIDGKYVMDTSYRGLDFFNTELAFYPNGHTDTRKVVLPLPTTAVFSSYYKGQAIYWLKSDWTSAKGTVFHNGAIIAFDLKAALADPARVEPLVLFMPNEHQSVAGTTQTKNRLVLSILSNVTSEVRSFDFGKGGWSSFKLALPENSTLSLTSSDDESDQLFVFSEGFLEPSTLFCADAATGQVEKITSTPERFDAGGLQAQQFWATSKDGTKVPYFLVARKDVKLDGTNPTILYAYGGFQIPMQPSYSAVLGKLWLEKGGAYALANIRGGGEFGPKWHDAGLKTNRQRVYDDFQAVAQDLIAKKVTSTPHLGIMGGSNGGLLMGVQMIQRPDLWNAVVIQVPLLDMVNFTRMSAGASWQGEYGSPDDPVEGAFLRSISPYHNVKAGVAYPEPFFETSTKDDRVGPVHARKMAALFEDMGLPFYYYENIEGGHAAAANLQEHARRYALEYTYMFQKLMDNK
SIO_010081: SJ05684_RS27670
subclass of: SO_0000673
so part of: SJ05684_RS27670
location: complement(102865..105045)
location: region:102865-105045:-1
so has part: feature:102865-105045:-1:exon

WP_014857788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102865-105045:-1:exon

SJ05684_RS27680
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodU
locus tag: SJ05684_RS27680
pseudo: true
so part of: sequence
location: complement(106088..107778)
location: region:106088-107778:-1
so has part: feature:106088-107778:-1:exon
subclass of: SO_0000010

position:106088:-1
position: 106088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107778:-1
position: 107778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106088-107778:-1:exon

SJ05684_RS27680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodU
locus tag: SJ05684_RS27680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875265.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nodulation protein NodU
SIO_010081: SJ05684_RS27680
subclass of: SO_0000673
so part of: SJ05684_RS27680
location: complement(106088..107778)
location: region:106088-107778:-1
so has part: feature:106088-107778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106088-107778:-1:exon

SJ05684_RS27685
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodS
locus tag: SJ05684_RS27685
pseudo: true
so part of: sequence
location: complement(107780..108408)
location: region:107780-108408:-1
so has part: feature:107780-108408:-1:exon
subclass of: SO_0000010

position:107780:-1
position: 107780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108408:-1
position: 108408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107780-108408:-1:exon

SJ05684_RS27685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodS
locus tag: SJ05684_RS27685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875264.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nodulation methyltransferase NodS
SIO_010081: SJ05684_RS27685
subclass of: SO_0000673
so part of: SJ05684_RS27685
location: complement(107780..108408)
location: region:107780-108408:-1
so has part: feature:107780-108408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107780-108408:-1:exon

SJ05684_RS27695
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27695
pseudo: true
so part of: sequence
location: complement(108753..>109210)
location: region:108753-109210:-1
so has part: feature:108753-109210:-1:exon
subclass of: SO_0000010

position:108753:-1
position: 108753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109210:-1
position: 109210
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108753-109210:-1:exon

SJ05684_RS27695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS27695
subclass of: SO_0000673
so part of: SJ05684_RS27695
location: complement(108753..>109210)
location: region:108753-109210:-1
so has part: feature:108753-109210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108753-109210:-1:exon

SJ05684_RS27700
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27700
old locus tag: SJ05684_a38210
so part of: sequence
location: complement(109242..110639)
location: region:109242-110639:-1
so has part: feature:109242-110639:-1:exon
subclass of: SO_0000010

position:109242:-1
position: 109242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110639:-1
position: 110639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109242-110639:-1:exon

SJ05684_RS27700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27700
old locus tag: SJ05684_a38210
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014328799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MLGRKERDQLELYMCGSLRDLVPDDHVLVKVDRVLDLSWLHEEVAELYAAGFGRPGIDPEVAVRLMLAGFLLGIVHDRRLMREAQVNIAIRWFIGFGLHEALPDHSSLTRIRQRWGAERFRTIFERTVKVCVAAKVAKGEVVHVDASLIRADVSWESLAVRHIDAVTDANEAAESERKSRKTGKYKKVCVTDPDASMATNGRNRRLEPAYKQHAVVDDACGVILDVEVTTGEINEGQVILSRLDAVAAMTGTIIKTATADAGYAYAKVFAGMEQRAIEAVIPAKAEPIRSPVPMRRFRYDAKHDTLKCPRGKMLKAGRAVKHGRFFTSRAADCRHCDLARLCLSNGRVNKAVVLGDDYPALLRARRRRERWSDEDRALYQRHRWRSEGYHGEAKTWHGLSRAIRRGLINMKIQAYLTAAAVNLKRLASAFLSILLFVYSQEATSSARHPFRQRKVFGIGLSVASA
SIO_010081: SJ05684_RS27700
subclass of: SO_0000673
so part of: SJ05684_RS27700
location: complement(109242..110639)
location: region:109242-110639:-1
so has part: feature:109242-110639:-1:exon

WP_014328799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109242-110639:-1:exon

SJ05684_RS27705
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27705
old locus tag: SJ05684_a38220
pseudo: true
so part of: sequence
location: complement(<110695..111453)
location: region:110695-111453:-1
so has part: feature:110695-111453:-1:exon
subclass of: SO_0000010

position:110695:-1
position: 110695
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:111453:-1
position: 111453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110695-111453:-1:exon

SJ05684_RS27705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27705
old locus tag: SJ05684_a38220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SJ05684_RS27705
subclass of: SO_0000673
so part of: SJ05684_RS27705
location: complement(<110695..111453)
location: region:110695-111453:-1
so has part: feature:110695-111453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110695-111453:-1:exon

SJ05684_RS29870
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29870
so part of: sequence
location: 111568..111981
location: region:111568-111981:1
so has part: feature:111568-111981:1:exon
subclass of: SO_0000010

position:111568:1
position: 111568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111981:1
position: 111981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111568-111981:1:exon

SJ05684_RS29870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRSAAFLNKALSFESVYSRSGEIGPYGGSYPREASMSKSQLGGYDEERVPGACGRCVWDSQTARSILRLLREQLFLLDGRVAARLGGRTSAYEGRRFRMSGYEIRVLLCAAGDAPDVATQESPHSFLEGSSADLDN
SIO_010081: SJ05684_RS29870
subclass of: SO_0000673
so part of: SJ05684_RS29870
location: 111568..111981
location: region:111568-111981:1
so has part: feature:111568-111981:1:exon

WP_157212054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111568-111981:1:exon

SJ05684_RS27720
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27720
old locus tag: SJ05684_a38250
so part of: sequence
location: 113467..114159
location: region:113467-114159:1
so has part: feature:113467-114159:1:exon
subclass of: SO_0000010

position:113467:1
position: 113467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114159:1
position: 114159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113467-114159:1:exon

SJ05684_RS27720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27720
old locus tag: SJ05684_a38250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARYDARLRGIGKAHACSAFAGHDFEGRNIMKTPWKFLAQLASRRRSASVQENFIAPDTDPEVIESETENKSPLPFDKPTQASGTPDHDSAVDRGSMFSDQLESDPNPLQEMNLTADIQEPGTPARSETKQSDAAGKRLGPQSQTSANSQKKPEIRRRERSKNARAEGVAQSAVATNEAETVQTSSSGDTFFNEVAILDEEIKELRRLLAQKLYLQNAQLKKMLERFDAS
SIO_010081: SJ05684_RS27720
subclass of: SO_0000673
so part of: SJ05684_RS27720
location: 113467..114159
location: region:113467-114159:1
so has part: feature:113467-114159:1:exon

WP_080579325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113467-114159:1:exon

SJ05684_RS27725
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27725
pseudo: true
so part of: sequence
location: complement(<114336..>114578)
location: region:114336-114578:-1
so has part: feature:114336-114578:-1:exon
subclass of: SO_0000010

position:114336:-1
position: 114336
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:114578:-1
position: 114578
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114336-114578:-1:exon

SJ05684_RS27725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967560.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: SJ05684_RS27725
subclass of: SO_0000673
so part of: SJ05684_RS27725
location: complement(<114336..>114578)
location: region:114336-114578:-1
so has part: feature:114336-114578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114336-114578:-1:exon

SJ05684_RS27730
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27730
old locus tag: SJ05684_a38260
so part of: sequence
location: complement(114681..116225)
location: region:114681-116225:-1
so has part: feature:114681-116225:-1:exon
subclass of: SO_0000010

position:114681:-1
position: 114681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116225:-1
position: 116225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114681-116225:-1:exon

SJ05684_RS27730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27730
old locus tag: SJ05684_a38260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007601864.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MRPSTLVPRGFVVDNTAVDDEVMLIAVRPASRTSLCPICGTRSERIHSRYQRRLADLPLVGKPVRLVIEARRFHCDAVLCGRRIFAERFDGDVLAPSARRTARLDHIVHHLGLALGGRPAAAFAKRLMLPVSNDTLLRVVRRRGSPRFVPPIVIGIDDWAWRRNQRYGTIICDLERRKTIALLPDREPSTAQAWLSDQPQISIVARDRGGGYATAAAKALPQATQVADRWHLMENASRAFVDAVRKSMRQIRTAIGAATINPELLTAAERIQYEGYLRREDTNAAILDLAKSGAAIKEIMRRTGYSRGLVRRVLRGQRSDVFRVRENSLELYLPWLDAQWSAGHRNGTELWRQLKSQGFRGCLRVVTEWATRRRKAEKVDDGALSRAPSARTIARLMTIGRDDLSKSETVTVAAIESGVPLLVEAREAIAAFQAMIRKKSLADLDPWLEKTRTGLVASFANGIVKDRAAVSAALTSPWSNGQTEGQITKLKLVKRQMYGRGKIDLLQARVIGAG
SIO_010081: SJ05684_RS27730
subclass of: SO_0000673
so part of: SJ05684_RS27730
location: complement(114681..116225)
location: region:114681-116225:-1
so has part: feature:114681-116225:-1:exon

WP_041409929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114681-116225:-1:exon

SJ05684_RS27735
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27735
so part of: sequence
location: 116315..117375
location: region:116315-117375:1
so has part: feature:116315-117375:1:exon
subclass of: SO_0000010

position:116315:1
position: 116315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117375:1
position: 117375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116315-117375:1:exon

SJ05684_RS27735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS27735
subclass of: SO_0000673
so part of: SJ05684_RS27735
location: join(116315..116807,116807..117375)
location: region:116315-117375:1
so has part: feature:116315-116807:1:exon
so has part: feature:116807-117375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116315-116807:1:exon

position:116807:1
position: 116807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116807-117375:1:exon

SJ05684_RS27740
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27740
pseudo: true
so part of: sequence
location: complement(117662..118848)
location: region:117662-118848:-1
so has part: feature:117662-118848:-1:exon
subclass of: SO_0000010

position:117662:-1
position: 117662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118848:-1
position: 118848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117662-118848:-1:exon

SJ05684_RS27740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: SJ05684_RS27740
subclass of: SO_0000673
so part of: SJ05684_RS27740
location: complement(117662..118848)
location: region:117662-118848:-1
so has part: feature:117662-118848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117662-118848:-1:exon

SJ05684_RS27750
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27750
old locus tag: SJ05684_a38320
pseudo: true
so part of: sequence
location: 119270..119982
location: region:119270-119982:1
so has part: feature:119270-119982:1:exon
subclass of: SO_0000010

position:119270:1
position: 119270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119982:1
position: 119982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119270-119982:1:exon

SJ05684_RS27750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27750
old locus tag: SJ05684_a38320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS27750
subclass of: SO_0000673
so part of: SJ05684_RS27750
location: 119270..119982
location: region:119270-119982:1
so has part: feature:119270-119982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119270-119982:1:exon

SJ05684_RS27755
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27755
so part of: sequence
location: 119966..120316
location: region:119966-120316:1
so has part: feature:119966-120316:1:exon
subclass of: SO_0000010

position:119966:1
position: 119966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120316:1
position: 120316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119966-120316:1:exon

SJ05684_RS27755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPQPDSRPRQLSLHQSADNFTVPYLLFVSRRDINRNVIDLSYDKISDYSGISRKKIPDALTFLSVNGLIRSERQRSDINDFAVSNSYRLSFLESYRHGGTTGRAEIDAVRAQNEF
SIO_010081: SJ05684_RS27755
subclass of: SO_0000673
so part of: SJ05684_RS27755
location: 119966..120316
location: region:119966-120316:1
so has part: feature:119966-120316:1:exon

WP_100209425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119966-120316:1:exon

SJ05684_RS27760
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27760
old locus tag: SJ05684_a38330
so part of: sequence
location: 120396..121253
location: region:120396-121253:1
so has part: feature:120396-121253:1:exon
subclass of: SO_0000010

position:120396:1
position: 120396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121253:1
position: 121253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120396-121253:1:exon

SJ05684_RS27760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27760
old locus tag: SJ05684_a38330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDKVARPIAQPIVGKRASYPFQVSIACWIDLLGYGGMIAAADFNPLHIKSREALRRLRDFHKVVASHSARHFPTLVMNDGAVAYRDLSLRSPSVTFDFLIRSWELFSEIKSLEAAAGHPGARMVLACGFRMRGRRAGMDASAGQLRSILARLQEGRINTEQAVREAASVRPTFDIIPQLQANFAFTKAYVAESSGKAGGIGGANFYVDLAIFDQPGLGWITLGEPINWSHPRLGLSADFAPVLGVNWRDRAPVAPEGVRDGLQIAEQLTGDPNVLHALRQAKKI
SIO_010081: SJ05684_RS27760
subclass of: SO_0000673
so part of: SJ05684_RS27760
location: 120396..121253
location: region:120396-121253:1
so has part: feature:120396-121253:1:exon

WP_014857794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120396-121253:1:exon

SJ05684_RS27765
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27765
old locus tag: SJ05684_a38340
so part of: sequence
location: 121347..121625
location: region:121347-121625:1
so has part: feature:121347-121625:1:exon
subclass of: SO_0000010

position:121347:1
position: 121347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121625:1
position: 121625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121347-121625:1:exon

SJ05684_RS27765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27765
old locus tag: SJ05684_a38340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012559675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPSIANENSERMSLRVPATAKAKLVRAAALRNTDLTDFVTQSALREAEAVIEEAETIKVSKRDHLRILELLENPPKPNAKLRAAIAGLPGSL
SIO_010081: SJ05684_RS27765
subclass of: SO_0000673
so part of: SJ05684_RS27765
location: 121347..121625
location: region:121347-121625:1
so has part: feature:121347-121625:1:exon

WP_015633362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121347-121625:1:exon

SJ05684_RS27770
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27770
old locus tag: SJ05684_a38350
so part of: sequence
location: 121622..122149
location: region:121622-122149:1
so has part: feature:121622-122149:1:exon
subclass of: SO_0000010

position:121622:1
position: 121622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122149:1
position: 122149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121622-122149:1:exon

SJ05684_RS27770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27770
old locus tag: SJ05684_a38350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018516793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPAWHEEPIAKSHGRAVFDCGDGQMNEFLLRFARQSHEQNASKTFCAIDDAVPGRILGFYTIAPSAVEHATVPDAMTRGLSRHDVPGFKLARLATDRAVAGQGLGGRLLAAAALRCLRLAGEGGGLLLIIDAKGERAANWYASYGAEPLKDKPLTLVMPLITFAADLRARGLL
SIO_010081: SJ05684_RS27770
subclass of: SO_0000673
so part of: SJ05684_RS27770
location: 121622..122149
location: region:121622-122149:1
so has part: feature:121622-122149:1:exon

WP_014857792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121622-122149:1:exon

SJ05684_RS27775
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27775
old locus tag: SJ05684_a38360
so part of: sequence
location: complement(122273..124330)
location: region:122273-124330:-1
so has part: feature:122273-124330:-1:exon
subclass of: SO_0000010

position:122273:-1
position: 122273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124330:-1
position: 124330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122273-124330:-1:exon

SJ05684_RS27775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27775
old locus tag: SJ05684_a38360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYLVVRTSVLDGPADLHPPTPIMSPVTQVRRKSVQSAVALMMSRGLVEQVVDESGILFQAGDNAEFFVTALQTPYLRQLYERAEWLAGYFQDYNDSGLNVVYGASDTGKSYIVEAIDFMLGGKGPLPDIPQANGYDRVLLAIAFDDGSETTLLRSMAGGRFQAFEGLHTSIPDAEGSPLGEIHNERDETNLSSFLLSKIGLAGKRIKKNATDETQALSFRNIARLAIVNEEEIIQKRSPLSDGNYTANTANTSVFTMLLTGVDETALLSRKSTSAEDQKRLAQIDLLDQLIADAQKRITTISGSRDELSGQEERLTRAMDNRAEQLAFTEEKFKAISSRRRAIIQKLEITNDRYTEIATLLDRFNLLRDHYVSDYERLLGIREAGSFFSVLQQEVCPTCGASPDHHDPTAVCHGDVAVTVAAAEAEMQKIESRQSELTTTIAALNAEAQSIRKSLPNMRNSLSELSIEIETVVSPDLRRQRATYKELADKGANVREALGLFSNLNDLTSRKANLERQNERGAGDATSNNRLTNTVVAPFAERVESVLRQWGFPAVEQVHFDTTAKDLVVSGKARTSYGKGLRAITQSAFTISLMQYCADNDLPHPGIVVLDSPLLSYREPDSAEDDLSDTNLNGNFYRYLLGLESDRQAIIVENMDPPSDVELGNRVVHFSGMADEGRFGLFPL
SIO_010081: SJ05684_RS27775
subclass of: SO_0000673
so part of: SJ05684_RS27775
location: complement(122273..124330)
location: region:122273-124330:-1
so has part: feature:122273-124330:-1:exon

WP_244938040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122273-124330:-1:exon

SJ05684_RS27785
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27785
old locus tag: SJ05684_a38370
so part of: sequence
location: complement(124438..125469)
location: region:124438-125469:-1
so has part: feature:124438-125469:-1:exon
subclass of: SO_0000010

position:124438:-1
position: 124438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125469:-1
position: 125469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124438-125469:-1:exon

SJ05684_RS27785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27785
old locus tag: SJ05684_a38370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASDFENGPKIDPLKIIQIYEASEWETFIDEWVHSLKTTYVNVMRPTGAGDKGIDIAGFCDADQLLGIWDNHQCKHYTSPLSFGVVAPEIGKMLWYSFSGEYKAPRACRFIAPKGASTSLSLLLSNANKLKAKVLAEWDKAISGKITSTGPVTLEGKFLDYVGDFDFRIFSAEQPRTIIEAHSRTRYHIGRFGGGLPSRPRPDAVPVEIGETEATYTSKLLDAYAEHKGETIASVSHLDKWGNLKSHFHRSREAFYHAESLRVFVREKVEPGTFEGLQTEILDGVLDTHDGEHSDGYARVVAVTEKAQSLVLDAHPLNRSASPTDRRGICHQLANDGKLTWRR
SIO_010081: SJ05684_RS27785
subclass of: SO_0000673
so part of: SJ05684_RS27785
location: complement(124438..125469)
location: region:124438-125469:-1
so has part: feature:124438-125469:-1:exon

WP_014857789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124438-125469:-1:exon

SJ05684_RS27790
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27790
old locus tag: SJ05684_a38380
so part of: sequence
location: 125548..126627
location: region:125548-126627:1
so has part: feature:125548-126627:1:exon
subclass of: SO_0000010

position:125548:1
position: 125548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126627:1
position: 126627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125548-126627:1:exon

SJ05684_RS27790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27790
old locus tag: SJ05684_a38380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MRTGIAFTVSPTDRQRLRALISDRNAPQKHVWRAEIILLSADGVGTVEIMRQTGKSKTCVWRWQERFATEGFEGLLRDKTRPSRIAPLGPEIGEQVVALSLADPPGETTHWTADMMAAEVGVSASAVRRIWKAHGLQPHRWRAFKLSNDPQFVAKLKDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAQVPADKAIHVILDNYAAHKHPKVRAWLDRHQRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVVDLQAAINRFLTEHNQQPKPFTWTADPDKIIAAVKRGHQVLDSIH
SIO_010081: SJ05684_RS27790
subclass of: SO_0000673
so part of: SJ05684_RS27790
location: 125548..126627
location: region:125548-126627:1
so has part: feature:125548-126627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125548-126627:1:exon

SJ05684_RS27795
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27795
so part of: sequence
location: complement(127001..128061)
location: region:127001-128061:-1
so has part: feature:127001-128061:-1:exon
subclass of: SO_0000010

position:127001:-1
position: 127001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128061:-1
position: 128061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127001-128061:-1:exon

SJ05684_RS27795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS27795
subclass of: SO_0000673
so part of: SJ05684_RS27795
location: complement(join(127001..127569,127569..128061))
location: region:127001-128061:-1
so has part: feature:127569-128061:-1:exon
so has part: feature:127001-127569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127569-128061:-1:exon

position:127569:-1
position: 127569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127001-127569:-1:exon

SJ05684_RS27800
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27800
so part of: sequence
location: complement(128256..129116)
location: region:128256-129116:-1
so has part: feature:128256-129116:-1:exon
subclass of: SO_0000010

position:128256:-1
position: 128256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129116:-1
position: 129116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128256-129116:-1:exon

SJ05684_RS27800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniQ family protein
translation: MGISARQLPVRLAPYPDELLSSWIIRHAAFYEVPPLAMLQHCLPEVQSLRTSDLDMTESQVARIARMFSADPARVLRMTFSNIARSSRRLIASEPRQLCCSCSPITNELQPVLRSQFLGWRITCPLCGNVIQNTDGGARPSPFSRYHNSALIGEQLLDDEAERGMQNWMAPSEIAGLLLMRRVPKAFPAYYERSGYRVLGVIIPDLDDVLRMETSKLPSRASTLLPLHLRPALLAGVAIVQRAGPEMLHMLRSHMMGENKARFGSAIDEILDCARQSRTSSQLHLI
SIO_010081: SJ05684_RS27800
subclass of: SO_0000673
so part of: SJ05684_RS27800
location: complement(128256..129116)
location: region:128256-129116:-1
so has part: feature:128256-129116:-1:exon

WP_080582764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128256-129116:-1:exon

SJ05684_RS27805
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27805
old locus tag: SJ05684_a38410
so part of: sequence
location: complement(129118..129999)
location: region:129118-129999:-1
so has part: feature:129118-129999:-1:exon
subclass of: SO_0000010

position:129118:-1
position: 129118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129999:-1
position: 129999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129118-129999:-1:exon

SJ05684_RS27805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27805
old locus tag: SJ05684_a38410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
translation: MNTEISHLTANAAALLGEADKQCIREIRSRRWLVYPRAKQVLDRLNLLVDHPRGTRMPSIAIYGDSGMGKTMIMKRFRDQHPPSFNSLTGRLKTPVLAMEMTSRPGERRFYAELLTLLGAPQRPRADIAQMEQAALRIMEAIGVQVLVIDEVHNILAGTYREQRIVLNTLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQFTLSRWVANEPFEILVALILRNTPLRHPSVLTAKSLRRILQITEGITANIFHIINSLAIEAIESGRERITDEAIEKWEPEFDAEAAFA
SIO_010081: SJ05684_RS27805
subclass of: SO_0000673
so part of: SJ05684_RS27805
location: complement(129118..129999)
location: region:129118-129999:-1
so has part: feature:129118-129999:-1:exon

WP_014857716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129118-129999:-1:exon

SJ05684_RS30770
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30770
old locus tag: SJ05684_a38430
so part of: sequence
location: complement(130006..130911)
location: region:130006-130911:-1
so has part: feature:130006-130911:-1:exon
subclass of: SO_0000010

position:130006:-1
position: 130006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130911:-1
position: 130911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130006-130911:-1:exon

SJ05684_RS30770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30770
old locus tag: SJ05684_a38430
inference: COORDINATES: protein motif:HMM:NF020859.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MVTREREIIEPWPVAGLPETLHVDNGSDFRSRAFQRGCEDAGIAINWRPPGEPRFGGHIERLIGTQMGKLHLLPGTTFSNAQELGEYDSKRHSALILRELERYIALDIVGNYHQSIHGTLGRPPIAVWREHEGEIPLRLPKDRMRFWLTFLPEQERTLQPTGIHLFGLRYWSAALSADVGSANRRLLVKYDPRDMSRVFVRRPSGNFVEARYADLTLPSITLHEALAARRALLAKGRREVNIRTIVGTAIEQRKLVDAAIKATATARRGRLASAKTKVDDGSWGSLRGIDSSKPVAFEDTE
SIO_010081: SJ05684_RS30770
subclass of: SO_0000673
so part of: SJ05684_RS30770
location: complement(130006..130911)
location: region:130006-130911:-1
so has part: feature:130006-130911:-1:exon

WP_015633574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130006-130911:-1:exon

SJ05684_RS27815
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27815
old locus tag: SJ05684_a38440
so part of: sequence
location: 131767..131913
location: region:131767-131913:1
so has part: feature:131767-131913:1:exon
subclass of: SO_0000010

position:131767:1
position: 131767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131913:1
position: 131913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131767-131913:1:exon

SJ05684_RS27815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27815
old locus tag: SJ05684_a38440
inference: COORDINATES: protein motif:HMM:NF012925.2
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: family 16 glycosylhydrolase
translation: MQNDNGYRCSPSYIELGFDASKGEHRYAIEWTPSEIRWLVKVASPPVV
SIO_010081: SJ05684_RS27815
subclass of: SO_0000673
so part of: SJ05684_RS27815
location: 131767..131913
location: region:131767-131913:1
so has part: feature:131767-131913:1:exon

WP_015633573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131767-131913:1:exon

SJ05684_RS27820
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27820
old locus tag: SJ05684_a38450
pseudo: true
so part of: sequence
location: 132047..>132805
location: region:132047-132805:1
so has part: feature:132047-132805:1:exon
subclass of: SO_0000010

position:132047:1
position: 132047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132805:1
position: 132805
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132047-132805:1:exon

SJ05684_RS27820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27820
old locus tag: SJ05684_a38450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SJ05684_RS27820
subclass of: SO_0000673
so part of: SJ05684_RS27820
location: 132047..>132805
location: region:132047-132805:1
so has part: feature:132047-132805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132047-132805:1:exon

SJ05684_RS27825
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27825
old locus tag: SJ05684_a38460
so part of: sequence
location: 132861..134258
location: region:132861-134258:1
so has part: feature:132861-134258:1:exon
subclass of: SO_0000010

position:132861:1
position: 132861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134258:1
position: 134258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132861-134258:1:exon

SJ05684_RS27825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27825
old locus tag: SJ05684_a38460
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014328799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MLGRKERDQLELYMCGSLRDLVPDDHVLVKVDRVLDLSWLHEEVAELYAAGFGRPGIDPEVAVRLMLAGFLLGIVHDRRLMREAQVNIAIRWFIGFGLHEALPDHSSLTRIRQRWGAERFRTIFERTVKVCVAAKVAKGEVVHVDASLIRADVSWESLAVRHIDAVTDANEAAESERKSRKTGKYKKVCVTDPDASMATNGRNRRLEPAYKQHAVVDDACGVILDVEVTTGEINEGQVILSRLDAVAAMTGTIIKTATADAGYAYAKVFAGMEQRAIEAVIPAKAEPIRSPVPMRRFRYDAKHDTLKCPRGKMLKAGRAVKHGRFFTSRAADCRHCDLARLCLSNGRVNKAVVLGDDYPALLRARRRRERWSDEDRALYQRHRWRSEGYHGEAKTWHGLSRAIRRGLINMKIQAYLTAAAVNLKRLASAFLSILLFVYSQEATSSARHPFRQRKVFGIGLSVASA
SIO_010081: SJ05684_RS27825
subclass of: SO_0000673
so part of: SJ05684_RS27825
location: 132861..134258
location: region:132861-134258:1
so has part: feature:132861-134258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132861-134258:1:exon

SJ05684_RS27830
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27830
old locus tag: SJ05684_a38470
pseudo: true
so part of: sequence
location: <134290..134775
location: region:134290-134775:1
so has part: feature:134290-134775:1:exon
subclass of: SO_0000010

position:134290:1
position: 134290
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:134775:1
position: 134775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134290-134775:1:exon

SJ05684_RS27830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27830
old locus tag: SJ05684_a38470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SJ05684_RS27830
subclass of: SO_0000673
so part of: SJ05684_RS27830
location: <134290..134775
location: region:134290-134775:1
so has part: feature:134290-134775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134290-134775:1:exon

SJ05684_RS27835
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27835
old locus tag: SJ05684_a38480
so part of: sequence
location: complement(135053..136204)
location: region:135053-136204:-1
so has part: feature:135053-136204:-1:exon
subclass of: SO_0000010

position:135053:-1
position: 135053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136204:-1
position: 136204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135053-136204:-1:exon

SJ05684_RS27835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27835
old locus tag: SJ05684_a38480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857807.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MLQQRDIGRSTAAFAPDETLVVVVEMSRSTWLIAGLLPGVNRRPLKKLKPDENVLMRLLEGWRQEALAAGRTIARVVVAYEAGRDGFWLARWLRAHGIEAHVIHATSVTVSRDRRRAKTDRLDTALLMRVLLGWLRGEVGHCTMAAVPEISEEDAKRPTRERENLVAERTRLVNRMKAALARLGIRDVNPALRKTAGRLDTLRTAEGTKIPGNTLAEMRRDIARLRLVEDQIAEIERERLQRLAKLNPERSRAAAMVHMLSRVVGLGVETADMLAHEILLRDLRDRRAVARYAGLTGSPDDSGARRRERGLSRAGNARVRRGMVQLAWRFLVFQKESALVAWYRERGSARSTACHGSCRIVARGQAKSSVCLLASPRWRAPVT
SIO_010081: SJ05684_RS27835
subclass of: SO_0000673
so part of: SJ05684_RS27835
location: complement(135053..136204)
location: region:135053-136204:-1
so has part: feature:135053-136204:-1:exon

WP_014857807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135053-136204:-1:exon

SJ05684_RS27845
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27845
so part of: sequence
location: 136604..137047
location: region:136604-137047:1
so has part: feature:136604-137047:1:exon
subclass of: SO_0000010

position:136604:1
position: 136604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137047:1
position: 137047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136604-137047:1:exon

SJ05684_RS27845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILSYNPGHDGAFAYVEEGRLVFSIEAEKSSKYRHSSLSVLDAFDALAELHAVPDVLCEGGWWPGDSPRVGEAAADYRGSDQVIVSKKRFLGKTIDFFSSSHERSHLLCAFGMSNVPKGTPCYALLWEGIIGAFYEIDAELNVSPR
SIO_010081: SJ05684_RS27845
subclass of: SO_0000673
so part of: SJ05684_RS27845
location: 136604..137047
location: region:136604-137047:1
so has part: feature:136604-137047:1:exon

WP_015633501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136604-137047:1:exon

SJ05684_RS27850
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27850
so part of: sequence
location: 137111..137503
location: region:137111-137503:1
so has part: feature:137111-137503:1:exon
subclass of: SO_0000010

position:137111:1
position: 137111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137503:1
position: 137503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137111-137503:1:exon

SJ05684_RS27850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27850
function: Transposase and inactivated derivatives
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKQHIEVITSVERRRHWSREEKERLVAAALEPGTVVSDVARSAGIHVSQLFRWRKELCQMSAPSVPPFIPIEVVAALPAPDPLETTPAPRARKKPSIVTIELGRGRRIRVESDVDTEALGRILDVVERR
SIO_010081: SJ05684_RS27850
subclass of: SO_0000673
so part of: SJ05684_RS27850
location: 137111..137503
location: region:137111-137503:1
so has part: feature:137111-137503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137111-137503:1:exon

SJ05684_RS27855
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27855
old locus tag: SJ05684_a38500
so part of: sequence
location: 137500..137847
location: region:137500-137847:1
so has part: feature:137500-137847:1:exon
subclass of: SO_0000010

position:137500:1
position: 137500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137847:1
position: 137847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137500-137847:1:exon

SJ05684_RS27855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27855
old locus tag: SJ05684_a38500
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPSGVKVWLATGYTDMRRGFPGLSLMVQETLKRDPHSGHLFCFRGRKGGLIKVIWHDGQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPSSAG
SIO_010081: SJ05684_RS27855
subclass of: SO_0000673
so part of: SJ05684_RS27855
location: 137500..137847
location: region:137500-137847:1
so has part: feature:137500-137847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137500-137847:1:exon

SJ05684_RS27860
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27860
old locus tag: SJ05684_a38510
so part of: sequence
location: 137944..139530
location: region:137944-139530:1
so has part: feature:137944-139530:1:exon
subclass of: SO_0000010

position:137944:1
position: 137944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139530:1
position: 139530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137944-139530:1:exon

SJ05684_RS27860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27860
old locus tag: SJ05684_a38510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MILAERAARREAEAVAARAQAVNSHSDALIARLRLEIEKLKRDIHGSRSERKARLLEQMELQLEELEADASQDELAAELAARSSTVRAFERKRPSRKPFPEHLPRERVVIAPPTSCPCCGSAKLAKLGEDIAETLEVIPRQWKVIQTVREKFSCRECEKIAQPPAPFHVTPRGFAGPNLLAMILFEKFGQHQPLNRQSERYAREGVDLSLSTLADQVGACAAVLKPLHGLIEAHVLTAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFSGTSPPAALYYASRDRRQEHPERHLKTFTGILQADAYGGYNPLFKMDRDSGPLTQALCWSHSRRKFFVLADIATNAKRGKNATPISPVALEAVKRIDALFDIERDINRLAASERLARRQRDSRRLVEELEAWMRAERTKLSRSSPVAEPIDYMLKRWEGFTSFLGDGRICLTNNAAERALRGFALGRKSWLFAGSDRGADRAAFMATMIMTAKLNDVDPQAWLADVLARIADTPTTKLAELLPWNWTGPRPMMALAS
SIO_010081: SJ05684_RS27860
subclass of: SO_0000673
so part of: SJ05684_RS27860
location: 137944..139530
location: region:137944-139530:1
so has part: feature:137944-139530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137944-139530:1:exon

SJ05684_RS27865
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27865
old locus tag: SJ05684_a38520
so part of: sequence
location: 139527..140138
location: region:139527-140138:1
so has part: feature:139527-140138:1:exon
subclass of: SO_0000010

position:139527:1
position: 139527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140138:1
position: 140138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139527-140138:1:exon

SJ05684_RS27865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27865
old locus tag: SJ05684_a38520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009798294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MTVDRIARLHIQLDDIEPLIWRRVEVPLTMSLKGLHDVIQAVMLFEDYHLFEFEAGGRCYDVPDPEDLYERKTFAARNVRIAALIERGIATFSYTYDFGDNWRHTITVEAVEDGNPSIEYPRFIDGERRAPPEDVGSTSGFEEFLNVMAKPRHAQHREFVRWYGGRFDPEDLSVDIIQDRVAKIARRRTLGKAGFAKSQNQQH
SIO_010081: SJ05684_RS27865
subclass of: SO_0000673
so part of: SJ05684_RS27865
location: 139527..140138
location: region:139527-140138:1
so has part: feature:139527-140138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139527-140138:1:exon

SJ05684_RS27870
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27870
old locus tag: SJ05684_a38530
so part of: sequence
location: 140168..140458
location: region:140168-140458:1
so has part: feature:140168-140458:1:exon
subclass of: SO_0000010

position:140168:1
position: 140168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140458:1
position: 140458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140168-140458:1:exon

SJ05684_RS27870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27870
old locus tag: SJ05684_a38530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYRNSALYTLKYVAAMLDEDEDFLRECSIEMFSEDGCLWAYDDYPASELSEHIILFTQVGIENLQQIIRNLRGIGDPPSKPVAERNRKKPRLLRS
SIO_010081: SJ05684_RS27870
subclass of: SO_0000673
so part of: SJ05684_RS27870
location: 140168..140458
location: region:140168-140458:1
so has part: feature:140168-140458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140168-140458:1:exon

SJ05684_RS27875
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27875
old locus tag: SJ05684_a38540
so part of: sequence
location: 140500..141648
location: region:140500-141648:1
so has part: feature:140500-141648:1:exon
subclass of: SO_0000010

position:140500:1
position: 140500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141648:1
position: 141648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140500-141648:1:exon

SJ05684_RS27875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27875
old locus tag: SJ05684_a38540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011950762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyltransferase C-terminal domain-containing protein
translation: MPEPGHRYAMLYALADPTFDKSTGEFSRLSDAGKLMALASLSKRSQPTSEEKKITSFLLQDCNHLKPRDCEALKDLPHYNVGVEDPEFRNFAGIFSDHLFDRFRLFAEANLKRGMPLLITGGCGLNRDWNTKWRDSGLFSDVFVPPVPNDSGSAIGTAIDAQFQFTGDPKISWDVYSGLHFVSDRAVDSALFDEWEPSTSTVAEMLASDMILGWASGRYEIGPRALGNRSILAAPFKTSTRERLNVIKQREQFRPLAPVCLEDDADKWFACSHPSPFMLYTFRATTDGLEAVTHVNRTARIQTVSALTNLPLFELLSAFKALTGYGVLCNTSLNFKNKGFTNTISDLSAYTLQHQLDGFVVEGRSYMLKSSLRYQSYQRSRC
SIO_010081: SJ05684_RS27875
subclass of: SO_0000673
so part of: SJ05684_RS27875
location: 140500..141648
location: region:140500-141648:1
so has part: feature:140500-141648:1:exon

WP_153451451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140500-141648:1:exon

SJ05684_RS27880
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27880
pseudo: true
so part of: sequence
location: 141726..>142793
location: region:141726-142793:1
so has part: feature:141726-142793:1:exon
subclass of: SO_0000010

position:141726:1
position: 141726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142793:1
position: 142793
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141726-142793:1:exon

SJ05684_RS27880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611883.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27880
subclass of: SO_0000673
so part of: SJ05684_RS27880
location: 141726..>142793
location: region:141726-142793:1
so has part: feature:141726-142793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141726-142793:1:exon

SJ05684_RS27885
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27885
old locus tag: SJ05684_a38550
so part of: sequence
location: complement(142811..143644)
location: region:142811-143644:-1
so has part: feature:142811-143644:-1:exon
subclass of: SO_0000010

position:142811:-1
position: 142811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143644:-1
position: 143644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142811-143644:-1:exon

SJ05684_RS27885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27885
old locus tag: SJ05684_a38550
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS27885
subclass of: SO_0000673
so part of: SJ05684_RS27885
location: complement(142811..143644)
location: region:142811-143644:-1
so has part: feature:142811-143644:-1:exon

WP_014327878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142811-143644:-1:exon

SJ05684_RS27890
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27890
old locus tag: SJ05684_a38560
pseudo: true
so part of: sequence
location: complement(<143914..144357)
location: region:143914-144357:-1
so has part: feature:143914-144357:-1:exon
subclass of: SO_0000010

position:143914:-1
position: 143914
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:144357:-1
position: 144357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143914-144357:-1:exon

SJ05684_RS27890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27890
old locus tag: SJ05684_a38560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015934064.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: SJ05684_RS27890
subclass of: SO_0000673
so part of: SJ05684_RS27890
location: complement(<143914..144357)
location: region:143914-144357:-1
so has part: feature:143914-144357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143914-144357:-1:exon

SJ05684_RS27895
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27895
pseudo: true
so part of: sequence
location: 144661..>145317
location: region:144661-145317:1
so has part: feature:144661-145317:1:exon
subclass of: SO_0000010

position:144661:1
position: 144661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145317:1
position: 145317
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144661-145317:1:exon

SJ05684_RS27895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970797.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27895
subclass of: SO_0000673
so part of: SJ05684_RS27895
location: 144661..>145317
location: region:144661-145317:1
so has part: feature:144661-145317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144661-145317:1:exon

SJ05684_RS27900
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27900
so part of: sequence
location: 145399..145848
location: region:145399-145848:1
so has part: feature:145399-145848:1:exon
subclass of: SO_0000010

position:145399:1
position: 145399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145848:1
position: 145848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145399-145848:1:exon

SJ05684_RS27900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014761245.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MMEEGQKLVVRLVGRNGRRRFDRASKDRLIAACLEPGASVSKLALEHGVNANLVWKWIRKHTQAPPFPPSSTSAFLPVQITAASSEFALEMPATDGEELPPKAERIGPLSSPAKVSASLPNGVKLTLECGDVDALTAIIGALGHVQTER
SIO_010081: SJ05684_RS27900
subclass of: SO_0000673
so part of: SJ05684_RS27900
location: 145399..145848
location: region:145399-145848:1
so has part: feature:145399-145848:1:exon

WP_014858061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145399-145848:1:exon

SJ05684_RS27905
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27905
old locus tag: SJ05684_a38600
so part of: sequence
location: 145829..146182
location: region:145829-146182:1
so has part: feature:145829-146182:1:exon
subclass of: SO_0000010

position:145829:1
position: 145829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146182:1
position: 146182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145829-146182:1:exon

SJ05684_RS27905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS27905
old locus tag: SJ05684_a38600
function: Transposase and inactivated derivatives
inference: COORDINATES: protein motif:HMM:NF033819.0
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFRLSADIKVYLHREPIDFRAGINRLAVLVQETMALDPFAPAVFAFCNRRRDRMKLLFFDRSGFVLILKRLTEDKFRWPRREVPVVTLSTEQLHWILDGIDIDAMVRHPVRQYQVAG
SIO_010081: SJ05684_RS27905
subclass of: SO_0000673
so part of: SJ05684_RS27905
location: 145829..146182
location: region:145829-146182:1
so has part: feature:145829-146182:1:exon

WP_015633495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145829-146182:1:exon

SJ05684_RS27910
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27910
old locus tag: SJ05684_a38610
pseudo: true
so part of: sequence
location: 146235..>147074
location: region:146235-147074:1
so has part: feature:146235-147074:1:exon
subclass of: SO_0000010

position:146235:1
position: 146235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147074:1
position: 147074
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146235-147074:1:exon

SJ05684_RS27910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27910
old locus tag: SJ05684_a38610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS27910
subclass of: SO_0000673
so part of: SJ05684_RS27910
location: 146235..>147074
location: region:146235-147074:1
so has part: feature:146235-147074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146235-147074:1:exon

SJ05684_RS27915
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27915
old locus tag: SJ05684_a38620
so part of: sequence
location: 147193..148290
location: region:147193-148290:1
so has part: feature:147193-148290:1:exon
subclass of: SO_0000010

position:147193:1
position: 147193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148290:1
position: 148290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147193-148290:1:exon

SJ05684_RS27915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27915
old locus tag: SJ05684_a38620
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477253.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1595 family transposase
translation: MSETMLAALTNIRTAEDMIVAFRDEEQCRRLLESMVWPAGRVCPACGYKRSIAIAGRDTGKRRARPGLYQCSSGDCRFQFTVTTHTPLHSTKLPLRVWLKGMWLMLQSDKGLSSVRLAEALGVSQPTAWRMGHALRLMAAREHMLDGTVEIDHFHLGGRPRINPDDPPPGRGRKGLPNTQKTPVMVMVQRPDDVTPGTPAGDARAAVVTGLSLRAAARAVETQIEPHACLMSDEATAFIALGENYARHDTVKHSSREYVRDAVHVNSVEGFNSRVRRTIAGVFHHISPQHADLYFHEIGFRWSQRIVTGQAVRKSRNGRERMKTLWSRVPPALQLLQVFRAATGRQMRRSPDGGIIVKSAVAVFG
SIO_010081: SJ05684_RS27915
subclass of: SO_0000673
so part of: SJ05684_RS27915
location: 147193..148290
location: region:147193-148290:1
so has part: feature:147193-148290:1:exon

WP_014328441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147193-148290:1:exon

SJ05684_RS27920
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27920
pseudo: true
so part of: sequence
location: <148333..149098
location: region:148333-149098:1
so has part: feature:148333-149098:1:exon
subclass of: SO_0000010

position:148333:1
position: 148333
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:149098:1
position: 149098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148333-149098:1:exon

SJ05684_RS27920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: SJ05684_RS27920
subclass of: SO_0000673
so part of: SJ05684_RS27920
location: <148333..149098
location: region:148333-149098:1
so has part: feature:148333-149098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148333-149098:1:exon

SJ05684_RS27930
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27930
pseudo: true
so part of: sequence
location: <149198..149422
location: region:149198-149422:1
so has part: feature:149198-149422:1:exon
subclass of: SO_0000010

position:149198:1
position: 149198
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:149422:1
position: 149422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149198-149422:1:exon

SJ05684_RS27930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970797.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS27930
subclass of: SO_0000673
so part of: SJ05684_RS27930
location: <149198..149422
location: region:149198-149422:1
so has part: feature:149198-149422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149198-149422:1:exon

SJ05684_RS27935
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27935
old locus tag: SJ05684_a38650
so part of: sequence
location: complement(149659..150870)
location: region:149659-150870:-1
so has part: feature:149659-150870:-1:exon
subclass of: SO_0000010

position:149659:-1
position: 149659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150870:-1
position: 150870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149659-150870:-1:exon

SJ05684_RS27935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27935
old locus tag: SJ05684_a38650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875351.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAHASAAEWMIAPDRSYSDWNAMATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILDKPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAKHMIRNGAVGTVRQAHVEYVQEWATAPFPSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTMTGQDIARLRAEFHTCGAVKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEVLRYVPLGEQEQIFVRGHGSGIVPEAERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPKDSVELSGAEDGLKGMLFIDACADSHESGGSWVSISGESIPNFC
SIO_010081: SJ05684_RS27935
subclass of: SO_0000673
so part of: SJ05684_RS27935
location: complement(149659..150870)
location: region:149659-150870:-1
so has part: feature:149659-150870:-1:exon

WP_014858057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149659-150870:-1:exon

SJ05684_RS30880
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30880
old locus tag: SJ05684_a38670
so part of: sequence
location: 152118..152249
location: region:152118-152249:1
so has part: feature:152118-152249:1:exon
subclass of: SO_0000010

position:152118:1
position: 152118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152249:1
position: 152249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152118-152249:1:exon

SJ05684_RS30880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30880
old locus tag: SJ05684_a38670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFRDRAIQIRADQLDDGGKVVFGTLVISGIVHDRVAVGVMMC
SIO_010081: SJ05684_RS30880
subclass of: SO_0000673
so part of: SJ05684_RS30880
location: 152118..152249
location: region:152118-152249:1
so has part: feature:152118-152249:1:exon

WP_269845049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152118-152249:1:exon

SJ05684_RS27950
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27950
old locus tag: SJ05684_a38680
so part of: sequence
location: complement(152454..153197)
location: region:152454-153197:-1
so has part: feature:152454-153197:-1:exon
subclass of: SO_0000010

position:152454:-1
position: 152454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153197:-1
position: 153197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152454-153197:-1:exon

SJ05684_RS27950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27950
old locus tag: SJ05684_a38680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875353.1
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MDTEAVGLAIAFFFIALAYAAVGQAGASGYIAAMALSGYSPLAIKPTALALNLMVSAIGTAQFLKVGQVSWRNVYPFAILGFPASALGGSVHLPERIYHPVLGLILVVSAIQMARSALRKSALVITIPKTPPLHAALITGAVIGFVSGTTGSGGGVFLAPVILSKNWGTAHQTAATTAVYNLMNSTAALIGACASWNALPNFLSWWLIAVAAGGSIGALIGSRYLSASSLRVILSVLLMVSGLKLLW
SIO_010081: SJ05684_RS27950
subclass of: SO_0000673
so part of: SJ05684_RS27950
location: complement(152454..153197)
location: region:152454-153197:-1
so has part: feature:152454-153197:-1:exon

WP_014858053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152454-153197:-1:exon

SJ05684_RS30155
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30155
so part of: sequence
location: 153985..154131
location: region:153985-154131:1
so has part: feature:153985-154131:1:exon
subclass of: SO_0000010

position:153985:1
position: 153985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154131:1
position: 154131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153985-154131:1:exon

SJ05684_RS30155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADGEKTGAATRLIKSVAPLTSTLAKVLRGAPTMVTIDYTGFLRSRRR
SIO_010081: SJ05684_RS30155
subclass of: SO_0000673
so part of: SJ05684_RS30155
location: 153985..154131
location: region:153985-154131:1
so has part: feature:153985-154131:1:exon

WP_014858052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153985-154131:1:exon

SJ05684_RS27955
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27955
pseudo: true
so part of: sequence
location: 154205..>155044
location: region:154205-155044:1
so has part: feature:154205-155044:1:exon
subclass of: SO_0000010

position:154205:1
position: 154205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155044:1
position: 155044
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154205-155044:1:exon

SJ05684_RS27955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611883.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27955
subclass of: SO_0000673
so part of: SJ05684_RS27955
location: 154205..>155044
location: region:154205-155044:1
so has part: feature:154205-155044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154205-155044:1:exon

SJ05684_RS27960
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27960
old locus tag: SJ05684_a38690
so part of: sequence
location: complement(155078..156475)
location: region:155078-156475:-1
so has part: feature:155078-156475:-1:exon
subclass of: SO_0000010

position:155078:-1
position: 155078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156475:-1
position: 156475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155078-156475:-1:exon

SJ05684_RS27960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27960
old locus tag: SJ05684_a38690
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014328799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MLGRKERDQLELYMCGSLRDLVPDDHVLVKVDRVLDLSWLHEEVAELYAAGFGRPGIDPEVAVRLMLAGFLLGIVHDRRLMREAQVNIAIRWFIGFGLHEALPDHSSLTRIRQRWGAERFRTIFERTVKVCVAAKVAKGEVVHVDASLIRADVSWESLAVRHIDAVTDANEAAESERKSRKTGKYKKVCVTDPDASMATNGRNRRLEPAYKQHAVVDDACGVILDVEVTTGEINEGQVILSRLDAVAAMTGTIIKTATADAGYAYAKVFAGMEQRAIEAVIPAKAEPIRSPVPMRRFRYDAKHDTLKCPRGKMLKAGRAVKHGRFFTSRAADCRHCDLARLCLSNGRVNKAVVLGDDYPALLRARRRRERWSDEDRALYQRHRWRSEGYHGEAKTWHGLSRAIRRGLINMKIQAYLTAAAVNLKRLASAFLSILLFVYSQEATSSARHPFRQRKVFGIGLSVASA
SIO_010081: SJ05684_RS27960
subclass of: SO_0000673
so part of: SJ05684_RS27960
location: complement(155078..156475)
location: region:155078-156475:-1
so has part: feature:155078-156475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155078-156475:-1:exon

SJ05684_RS27965
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27965
pseudo: true
so part of: sequence
location: <156544..156786
location: region:156544-156786:1
so has part: feature:156544-156786:1:exon
subclass of: SO_0000010

position:156544:1
position: 156544
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:156786:1
position: 156786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156544-156786:1:exon

SJ05684_RS27965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020817899.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS27965
subclass of: SO_0000673
so part of: SJ05684_RS27965
location: <156544..156786
location: region:156544-156786:1
so has part: feature:156544-156786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156544-156786:1:exon

SJ05684_RS27970
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS27970
old locus tag: SJ05684_a38710
pseudo: true
so part of: sequence
location: 156773..>157500
location: region:156773-157500:1
so has part: feature:156773-157500:1:exon
subclass of: SO_0000010

position:156773:1
position: 156773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157500:1
position: 157500
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156773-157500:1:exon

SJ05684_RS27970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS27970
old locus tag: SJ05684_a38710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533378.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: radical SAM protein
SIO_010081: SJ05684_RS27970
subclass of: SO_0000673
so part of: SJ05684_RS27970
location: 156773..>157500
location: region:156773-157500:1
so has part: feature:156773-157500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156773-157500:1:exon

SJ05684_RS27975
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodA
locus tag: SJ05684_RS27975
old locus tag: SJ05684_a38720
so part of: sequence
location: 157980..158570
location: region:157980-158570:1
so has part: feature:157980-158570:1:exon
subclass of: SO_0000010

position:157980:1
position: 157980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158570:1
position: 158570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157980-158570:1:exon

SJ05684_RS27975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodA
locus tag: SJ05684_RS27975
old locus tag: SJ05684_a38720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation N-acyltransferase NodA
translation: MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPEFRVIGYDAHGVAAHMGLLRRFIRVGDADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPFAFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLNLPPTRTEDVLVVVFPIGRPMSEWPSGTLIERNGPEL
SIO_010081: SJ05684_RS27975
subclass of: SO_0000673
so part of: SJ05684_RS27975
location: 157980..158570
location: region:157980-158570:1
so has part: feature:157980-158570:1:exon

WP_015633488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157980-158570:1:exon

SJ05684_RS27980
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodB
locus tag: SJ05684_RS27980
so part of: sequence
location: 158567..159214
location: region:158567-159214:1
so has part: feature:158567-159214:1:exon
subclass of: SO_0000010

position:158567:1
position: 158567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159214:1
position: 159214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158567-159214:1:exon

SJ05684_RS27980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodB
locus tag: SJ05684_RS27980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913829.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide deacetylase NodB
translation: MKQLDYLRTVPRSGTGAPSVYLTFDDGPNPVFTPEVLDVLAEHRVPATFFVIGAYAKDRPQLIRRMVAQGHEVANHTMTHPDLSACGRRDVERQVLEANRAIRMACPEASVRHIRAPYGIWSDDVLTTSANAGLAAVHWSVDPRDWSRPGIDAIVDAVLASVRPGSIILLHDGCPPDELANTDASFRDQTVAALSRLIPALHDRGFIIRSLPQNH
SIO_010081: SJ05684_RS27980
subclass of: SO_0000673
so part of: SJ05684_RS27980
location: 158567..159214
location: region:158567-159214:1
so has part: feature:158567-159214:1:exon

WP_010875356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158567-159214:1:exon

SJ05684_RS27985
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodC
locus tag: SJ05684_RS27985
old locus tag: SJ05684_a38730
so part of: sequence
location: 159229..160470
location: region:159229-160470:1
so has part: feature:159229-160470:1:exon
subclass of: SO_0000010

position:159229:1
position: 159229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160470:1
position: 160470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159229-160470:1:exon

SJ05684_RS27985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodC
locus tag: SJ05684_RS27985
old locus tag: SJ05684_a38730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875357.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide synthase NodC
translation: MDLLGTTGAVAISLYAALSTAYKGMQAIYALPTNTTAASTPVTGSGAPPSVDVIVPCYNEDPRALSACLASIAKQDYAGELRVYVVDDGSGNRNAIIPVHDHYACDPRFRFILMPKNVGKRKAQIVAIRESSGDLVLNVDSDTTIAPDVVTKLALKMYSPAVGAAMGQLTASNRSDTWLTRLIDMEYWLACNEERAAQARFGAVMCCCGPCAMYRRSALLLLLDKYETQLFRGRPSDFGEDRHLTILMLNAGFRTEYVPDAIAATVVPNSMGAYLRQQLRWARSTFRDTLLALRLLPGLDRYLTLDVIGQNLGPLLLALSVLTGLAQLALTATVPWSTILMIASMTMVRCGVAAFRARELRFLGFSLHTLLNVALLLPLKAYALCTLSNSDWLSRGSPAAAPNGVKDSPEPHC
SIO_010081: SJ05684_RS27985
subclass of: SO_0000673
so part of: SJ05684_RS27985
location: 159229..160470
location: region:159229-160470:1
so has part: feature:159229-160470:1:exon

WP_014858070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159229-160470:1:exon

SJ05684_RS27990
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodI
locus tag: SJ05684_RS27990
old locus tag: SJ05684_a38740
so part of: sequence
location: 160622..161653
location: region:160622-161653:1
so has part: feature:160622-161653:1:exon
subclass of: SO_0000010

position:160622:1
position: 160622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161653:1
position: 161653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160622-161653:1:exon

SJ05684_RS27990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodI
locus tag: SJ05684_RS27990
old locus tag: SJ05684_a38740
function: ABC-type multidrug transport system, ATPase component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633486.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation factor ABC transporter ATP-binding protein NodI
translation: MQLLTRANVSSSPSRRPESNARKQKCHGHSNADNSLSCSKSDVAIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGTITVLGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLRTRELEEAIPPLLDFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLALGKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHALIDEQIGCDVIEIYGGNPRELTSVVGPYAQRVEVSGETLFCYSSDPEQVRLQLRGRTGLRLLQRPPNLEDVFLRLTGREMKD
SIO_010081: SJ05684_RS27990
subclass of: SO_0000673
so part of: SJ05684_RS27990
location: 160622..161653
location: region:160622-161653:1
so has part: feature:160622-161653:1:exon

WP_015633486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160622-161653:1:exon

SJ05684_RS27995
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodJ
locus tag: SJ05684_RS27995
old locus tag: SJ05684_a38750
so part of: sequence
location: 161657..162445
location: region:161657-162445:1
so has part: feature:161657-162445:1:exon
subclass of: SO_0000010

position:161657:1
position: 161657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162445:1
position: 162445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161657-162445:1:exon

SJ05684_RS27995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodJ
locus tag: SJ05684_RS27995
old locus tag: SJ05684_a38750
function: ABC-type multidrug transport system, permease component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NodJ
translation: MWKRYAAVLPANPWNWIAVWRRNYMAWKKAAIASILGNLAEPVTSLFGLGFGLGAMVGRVDGIPYVAFLAAGMVATSAMISATFETIHATFARMHAKRTWESALCTQLTLGDIVLGELAWAASKALLAGTAMMLVAATMGFASWPSVLFALPVIALTGFAFASLAMIVTALAPSYDYFIFYQTLFLTPMLFLSGAVFPVSQLPDIFQKLSHLLPLSHSIELIRPAMLDRPGGGVALHISALCIFAVMPFFLSVGLLRRRLMS
SIO_010081: SJ05684_RS27995
subclass of: SO_0000673
so part of: SJ05684_RS27995
location: 161657..162445
location: region:161657-162445:1
so has part: feature:161657-162445:1:exon

WP_015633485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161657-162445:1:exon

SJ05684_RS28005
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolO
locus tag: SJ05684_RS28005
old locus tag: SJ05684_a38770
pseudo: true
so part of: sequence
location: 162545..164604
location: region:162545-164604:1
so has part: feature:162545-164604:1:exon
subclass of: SO_0000010

position:162545:1
position: 162545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164604:1
position: 164604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162545-164604:1:exon

SJ05684_RS28005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolO
locus tag: SJ05684_RS28005
old locus tag: SJ05684_a38770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636983.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nodulation protein NolO
SIO_010081: SJ05684_RS28005
subclass of: SO_0000673
so part of: SJ05684_RS28005
location: 162545..164604
location: region:162545-164604:1
so has part: feature:162545-164604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162545-164604:1:exon

SJ05684_RS28010
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: noeI
locus tag: SJ05684_RS28010
so part of: sequence
location: 164771..165496
location: region:164771-165496:1
so has part: feature:164771-165496:1:exon
subclass of: SO_0000010

position:164771:1
position: 164771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165496:1
position: 165496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164771-165496:1:exon

SJ05684_RS28010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: noeI
locus tag: SJ05684_RS28010
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875361.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-O-methyltransferase NoeI
translation: MEVGRYLKEGLLISLQQRLREFAEGIGKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSDARRFLQLRPKAQLFCFEPDPRAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDAKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWCSEAGLESIDLIWMDVQGAESDVIAGGKETLNNTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRNTRL
SIO_010081: SJ05684_RS28010
subclass of: SO_0000673
so part of: SJ05684_RS28010
location: 164771..165496
location: region:164771-165496:1
so has part: feature:164771-165496:1:exon

WP_014858065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164771-165496:1:exon

SJ05684_RS28015
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28015
old locus tag: SJ05684_a38780
pseudo: true
so part of: sequence
location: <166583..>166998
location: region:166583-166998:1
so has part: feature:166583-166998:1:exon
subclass of: SO_0000010

position:166583:1
position: 166583
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:166998:1
position: 166998
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166583-166998:1:exon

SJ05684_RS28015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28015
old locus tag: SJ05684_a38780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004265661.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS28015
subclass of: SO_0000673
so part of: SJ05684_RS28015
location: <166583..>166998
location: region:166583-166998:1
so has part: feature:166583-166998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166583-166998:1:exon

SJ05684_RS28020
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28020
old locus tag: SJ05684_a38790
so part of: sequence
location: complement(167135..168016)
location: region:167135-168016:-1
so has part: feature:167135-168016:-1:exon
subclass of: SO_0000010

position:167135:-1
position: 167135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168016:-1
position: 168016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167135-168016:-1:exon

SJ05684_RS28020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28020
old locus tag: SJ05684_a38790
function: Retron-type reverse transcriptase
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
translation: MQNVLWAKRLYWVIDLDIQKYFDSIPHSYLRAFLDQRVTDGVIRRMIDKWLNAGAIEDGLLRRTTEGSPQGGVVSPCLSNIFLHYVLDEWFETEVRPRLRGGCTIARYADDAIMAFDNIVDAQRVLAVLGKRLGRYGLTLHPDKTRLVDFRPRRTESTRHPETDGTSFDFLGLTHVWGRSRRGKAMVMQVTAKGRFARALAAVSDWCRKHRNWSIRDQHRHLSSMMWGHFAYYGVGGNARRLRWFAHQVVRIWQKWLSRRDRQSVFRWTRLNEILKRHPLPPARIAHSFAAVS
SIO_010081: SJ05684_RS28020
subclass of: SO_0000673
so part of: SJ05684_RS28020
location: complement(167135..168016)
location: region:167135-168016:-1
so has part: feature:167135-168016:-1:exon

WP_015633482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167135-168016:-1:exon

SJ05684_RS28025
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28025
old locus tag: SJ05684_a38800
pseudo: true
so part of: sequence
location: complement(168059..168810)
location: region:168059-168810:-1
so has part: feature:168059-168810:-1:exon
subclass of: SO_0000010

position:168059:-1
position: 168059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168810:-1
position: 168810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168059-168810:-1:exon

SJ05684_RS28025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28025
old locus tag: SJ05684_a38800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS28025
subclass of: SO_0000673
so part of: SJ05684_RS28025
location: complement(168059..168810)
location: region:168059-168810:-1
so has part: feature:168059-168810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168059-168810:-1:exon

SJ05684_RS28035
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28035
old locus tag: SJ05684_a38810
so part of: sequence
location: 169404..169637
location: region:169404-169637:1
so has part: feature:169404-169637:1:exon
subclass of: SO_0000010

position:169404:1
position: 169404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169637:1
position: 169637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169404-169637:1:exon

SJ05684_RS28035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28035
old locus tag: SJ05684_a38810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007753860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEETVQIGSRGDFGLWAIEVAKQIVGEQGFELAKAARDGTEDDVRAAGNALGKAITDVLLEVYDGLLEEIPEDQDAT
SIO_010081: SJ05684_RS28035
subclass of: SO_0000673
so part of: SJ05684_RS28035
location: 169404..169637
location: region:169404-169637:1
so has part: feature:169404-169637:1:exon

WP_015633479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169404-169637:1:exon

SJ05684_RS28040
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28040
pseudo: true
so part of: sequence
location: complement(<169689..>169955)
location: region:169689-169955:-1
so has part: feature:169689-169955:-1:exon
subclass of: SO_0000010

position:169689:-1
position: 169689
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:169955:-1
position: 169955
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169689-169955:-1:exon

SJ05684_RS28040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017997470.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
SIO_010081: SJ05684_RS28040
subclass of: SO_0000673
so part of: SJ05684_RS28040
location: complement(<169689..>169955)
location: region:169689-169955:-1
so has part: feature:169689-169955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169689-169955:-1:exon

SJ05684_RS28045
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28045
old locus tag: SJ05684_a38820
so part of: sequence
location: 170037..171116
location: region:170037-171116:1
so has part: feature:170037-171116:1:exon
subclass of: SO_0000010

position:170037:1
position: 170037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171116:1
position: 171116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170037-171116:1:exon

SJ05684_RS28045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28045
old locus tag: SJ05684_a38820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MRTGIAFTVSPTDRQRLRALISDRNAPQKHVWRAEIILLSADGVGTVEIMRQTGKSKTCVWRWQERFATEGFEGLLRDKTRPSRIAPLGPEIGEQVVALSLADPPGETTHWTADMMAAEVGVSASAVRRIWKAHGLQPHRWRAFKLSNDPQFVAKLKDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAQVPADKAIHVILDNYAAHKHPKVRAWLDRHQRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVVDLQAAINRFLTEHNQQPKPFTWTADPDKIIAAVKRGHQVLDSIH
SIO_010081: SJ05684_RS28045
subclass of: SO_0000673
so part of: SJ05684_RS28045
location: 170037..171116
location: region:170037-171116:1
so has part: feature:170037-171116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170037-171116:1:exon

SJ05684_RS28050
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28050
old locus tag: SJ05684_a38830
so part of: sequence
location: 171484..172791
location: region:171484-172791:1
so has part: feature:171484-172791:1:exon
subclass of: SO_0000010

position:171484:1
position: 171484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172791:1
position: 172791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171484-172791:1:exon

SJ05684_RS28050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28050
old locus tag: SJ05684_a38830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018098881.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MDAQETTAACRDAFAELASPACIHDPYPFMRWLREHDPVHRAASGLFLLSRHADIYWALKATGDAFRGPAPGELARYFPRAATSLSVNLMASTLAMKDPPTHTRLRRLISRDFTMRQIDNLRPSTARIVAARLDGMAPALERGEAVDLHREFALALPMLVFAELFGLPQDDMLGLAAGIGAIVEGLGPHASDPQLAAADAASARVLAYFGDLIQRKRTDPRHDIVSMLVGAHDDDADTLSDAELISMLWGMLLGGFATTAATIDHAVLAMRAYPEQRHWLQGDAVGVKAFVEEVLRCDAPVLFSPTPRIAQRDIELGGVVIPKNADVRLLIAAGNRDPDAFADPDRFDPARFYGTNPGGTNPGMSTDGKIMLSFGHGIHFCPGAQLARMQLAESLPRIQARFPTLALAEQPTREPSAFLRTFRALPVRLHAQGGG
SIO_010081: SJ05684_RS28050
subclass of: SO_0000673
so part of: SJ05684_RS28050
location: 171484..172791
location: region:171484-172791:1
so has part: feature:171484-172791:1:exon

WP_014857763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171484-172791:1:exon

SJ05684_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28055
old locus tag: SJ05684_a38840
so part of: sequence
location: 172793..173101
location: region:172793-173101:1
so has part: feature:172793-173101:1:exon
subclass of: SO_0000010

position:172793:1
position: 172793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173101:1
position: 173101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172793-173101:1:exon

SJ05684_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28055
old locus tag: SJ05684_a38840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006204698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin
translation: MRVVVDQDLCGTTGQCVLTLPGTFRQRKPDGVAEVCVATVPQALHAAVLLAASQCPVAAIRVIESDTGDGERASADPAPSPAEAERHAAKDQRNPGGHDGTV
SIO_010081: SJ05684_RS28055
subclass of: SO_0000673
so part of: SJ05684_RS28055
location: 172793..173101
location: region:172793-173101:1
so has part: feature:172793-173101:1:exon

WP_034859623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172793-173101:1:exon

SJ05684_RS28060
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28060
old locus tag: SJ05684_a38850
so part of: sequence
location: 173146..173313
location: region:173146-173313:1
so has part: feature:173146-173313:1:exon
subclass of: SO_0000010

position:173146:1
position: 173146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173313:1
position: 173313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173146-173313:1:exon

SJ05684_RS28060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28060
old locus tag: SJ05684_a38850
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MAALVAFLLSDDAAFITGQVVCIDGGMLAHVPTYADGGNSRAARAAGDTAEAGRC
SIO_010081: SJ05684_RS28060
subclass of: SO_0000673
so part of: SJ05684_RS28060
location: 173146..173313
location: region:173146-173313:1
so has part: feature:173146-173313:1:exon

WP_014857762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173146-173313:1:exon

SJ05684_RS29880
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29880
pseudo: true
so part of: sequence
location: 173313..>174335
location: region:173313-174335:1
so has part: feature:173313-174335:1:exon
subclass of: SO_0000010

position:174335:1
position: 174335
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173313-174335:1:exon

SJ05684_RS29880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838317.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome P450
SIO_010081: SJ05684_RS29880
subclass of: SO_0000673
so part of: SJ05684_RS29880
location: 173313..>174335
location: region:173313-174335:1
so has part: feature:173313-174335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173313-174335:1:exon

SJ05684_RS29885
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29885
so part of: sequence
location: 174453..175433
location: region:174453-175433:1
so has part: feature:174453-175433:1:exon
subclass of: SO_0000010

position:174453:1
position: 174453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175433:1
position: 175433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174453-175433:1:exon

SJ05684_RS29885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007605890.1
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MQTDSTLHDDRTGVSALGGGASGRLLPEIWMQDGAKRVEQALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVRFGEATAILVGDALQAHAFLTLASLDAPGDNRIALVRELARAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKCGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATADTATLGKTPGKDAAGQKPTCASIMGLQAARQFALDLLRDAGEAIAPLGPRAERMAQMLQRANAYLFKHAPCA
SIO_010081: SJ05684_RS29885
subclass of: SO_0000673
so part of: SJ05684_RS29885
location: 174453..175433
location: region:174453-175433:1
so has part: feature:174453-175433:1:exon

WP_034859625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174453-175433:1:exon

SJ05684_RS28070
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28070
old locus tag: SJ05684_a38880
so part of: sequence
location: 175569..177119
location: region:175569-177119:1
so has part: feature:175569-177119:1:exon
subclass of: SO_0000010

position:175569:1
position: 175569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177119:1
position: 177119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175569-177119:1:exon

SJ05684_RS28070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28070
old locus tag: SJ05684_a38880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_026312707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNALSEQILSELRHLLSEMSDGGSVGPSVYDTARALQFHGNVTGRQDAYAWLIAQQQADGGWGSADFPLFRHAPTWAALLALQRADPLLGAADAVQTATRFLERQPDPYSHVVPEDAPIGAELILPQLCGEAASLLGGVEFPRHPALLPLRQACLVKLRAVATLPSGHPLLHSWEAWGTSPTTACPDDDGSIGISPAATAAWRAHAVTQGSTTQVGRADAYLQAASRATRSGIEGVVPNVWPINVFEPCWSLYTLHLAGLFAHPALAEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGREPAVDALRHFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAHALPQTPLWIGKELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP
SIO_010081: SJ05684_RS28070
subclass of: SO_0000673
so part of: SJ05684_RS28070
location: 175569..177119
location: region:175569-177119:1
so has part: feature:175569-177119:1:exon

WP_014857759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175569-177119:1:exon

SJ05684_RS28075
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28075
old locus tag: SJ05684_a38890
so part of: sequence
location: 177116..178018
location: region:177116-178018:1
so has part: feature:177116-178018:1:exon
subclass of: SO_0000010

position:177116:1
position: 177116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178018:1
position: 178018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177116-178018:1:exon

SJ05684_RS28075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28075
old locus tag: SJ05684_a38890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQTERALQQVLEWGRSLTGFADEHAEEAVRGGQYILQRIHPSLRDTSARTGRDPQDETLIVAFYRELALLFWLDDCNDLGLIAPEQLAAVELAVGQGVPCALPGFEGCAVLRASLAALAYDRRDYAQLLDDTRCYCAALRAGHAQAAGAERWSYAEYLHNGIDSIGYANVFCCLSLLWGLDMATLRARPAFRHVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILVQQRYPAMPAVEFLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAQFYQTSTSRYRSDAAGGGQRAPA
SIO_010081: SJ05684_RS28075
subclass of: SO_0000673
so part of: SJ05684_RS28075
location: 177116..178018
location: region:177116-178018:1
so has part: feature:177116-178018:1:exon

WP_014857758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177116-178018:1:exon

SJ05684_RS28080
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: fni
locus tag: SJ05684_RS28080
old locus tag: SJ05684_a38900
so part of: sequence
location: 178104..179153
location: region:178104-179153:1
so has part: feature:178104-179153:1:exon
subclass of: SO_0000010

position:178104:1
position: 178104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179153:1
position: 179153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178104-179153:1:exon

SJ05684_RS28080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: fni
locus tag: SJ05684_RS28080
old locus tag: SJ05684_a38900
EC number: 5.3.3.2
function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633476.1
GO function: GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 2 isopentenyl-diphosphate Delta-isomerase
translation: MSDTALSRRKDDHLDIVLDRRTAPATVAAGWEYIRFEHCALPELELTQIDLRASLLGKTMRAPLLISSMTGGMPRAEAINRHLSEAAQDLGIAMCVGSQRLSLQSRNSQGLTRALRRLAPDIPLLANIGAAQLREADGLDLARRAVDALEADGLIIHLNPLQEAVQPEGDRDWRGVLAQIARAARSVGVPIVAKEVGSGLSASVACALVEAGVAVIDVAGAGGTSWAAVEGERARDAADRTVAMAFADWGIPTPASVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLGAATVSTEAVVSHFEIVIRQLAVACFCTGSADLAALRQARLLPSAHLPAG
SIO_010081: SJ05684_RS28080
subclass of: SO_0000673
so part of: SJ05684_RS28080
location: 178104..179153
location: region:178104-179153:1
so has part: feature:178104-179153:1:exon

WP_015633476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178104-179153:1:exon

SJ05684_RS30775
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30775
pseudo: true
so part of: sequence
location: 179249..>179376
location: region:179249-179376:1
so has part: feature:179249-179376:1:exon
subclass of: SO_0000010

position:179249:1
position: 179249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179376:1
position: 179376
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179249-179376:1:exon

SJ05684_RS30775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611821.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SJ05684_RS30775
subclass of: SO_0000673
so part of: SJ05684_RS30775
location: 179249..>179376
location: region:179249-179376:1
so has part: feature:179249-179376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179249-179376:1:exon

SJ05684_RS28090
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28090
pseudo: true
so part of: sequence
location: 179530..180443
location: region:179530-180443:1
so has part: feature:179530-180443:1:exon
subclass of: SO_0000010

position:179530:1
position: 179530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180443:1
position: 180443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179530-180443:1:exon

SJ05684_RS28090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970904.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: SJ05684_RS28090
subclass of: SO_0000673
so part of: SJ05684_RS28090
location: 179530..180443
location: region:179530-180443:1
so has part: feature:179530-180443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179530-180443:1:exon

SJ05684_RS28095
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28095
pseudo: true
so part of: sequence
location: 180440..181440
location: region:180440-181440:1
so has part: feature:180440-181440:1:exon
subclass of: SO_0000010

position:180440:1
position: 180440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181440:1
position: 181440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180440-181440:1:exon

SJ05684_RS28095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003584387.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: SJ05684_RS28095
subclass of: SO_0000673
so part of: SJ05684_RS28095
location: 180440..181440
location: region:180440-181440:1
so has part: feature:180440-181440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180440-181440:1:exon

SJ05684_RS28100
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28100
old locus tag: SJ05684_a38970
pseudo: true
so part of: sequence
location: <181562..181687
location: region:181562-181687:1
so has part: feature:181562-181687:1:exon
subclass of: SO_0000010

position:181562:1
position: 181562
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:181687:1
position: 181687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181562-181687:1:exon

SJ05684_RS28100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28100
old locus tag: SJ05684_a38970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017270940.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: SJ05684_RS28100
subclass of: SO_0000673
so part of: SJ05684_RS28100
location: <181562..181687
location: region:181562-181687:1
so has part: feature:181562-181687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181562-181687:1:exon

SJ05684_RS28110
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28110
pseudo: true
so part of: sequence
location: 182185..>183252
location: region:182185-183252:1
so has part: feature:182185-183252:1:exon
subclass of: SO_0000010

position:182185:1
position: 182185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183252:1
position: 183252
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182185-183252:1:exon

SJ05684_RS28110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611883.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: SJ05684_RS28110
subclass of: SO_0000673
so part of: SJ05684_RS28110
location: 182185..>183252
location: region:182185-183252:1
so has part: feature:182185-183252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182185-183252:1:exon

SJ05684_RS28115
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28115
old locus tag: SJ05684_a38990
so part of: sequence
location: complement(183270..184103)
location: region:183270-184103:-1
so has part: feature:183270-184103:-1:exon
subclass of: SO_0000010

position:183270:-1
position: 183270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184103:-1
position: 184103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183270-184103:-1:exon

SJ05684_RS28115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28115
old locus tag: SJ05684_a38990
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS28115
subclass of: SO_0000673
so part of: SJ05684_RS28115
location: complement(183270..184103)
location: region:183270-184103:-1
so has part: feature:183270-184103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183270-184103:-1:exon

SJ05684_RS30260
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30260
so part of: sequence
location: 184885..185289
location: region:184885-185289:1
so has part: feature:184885-185289:1:exon
subclass of: SO_0000010

position:184885:1
position: 184885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185289:1
position: 185289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184885-185289:1:exon

SJ05684_RS30260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTDGAVEGDKPDFRVVDDRPKLELNGEKITLLIRSALLDDATNISEKLGALQAEITVEDESDVWISLEEDLWPHDKEPVQALIVAAQLGLEVELESMWSTIPFHWPGLGELTSSTSEYTHDAGCVRPIRFLTK
SIO_010081: SJ05684_RS30260
subclass of: SO_0000673
so part of: SJ05684_RS30260
location: 184885..185289
location: region:184885-185289:1
so has part: feature:184885-185289:1:exon

WP_014858092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184885-185289:1:exon

SJ05684_RS28130
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28130
old locus tag: SJ05684_a39010
so part of: sequence
location: 186032..186265
location: region:186032-186265:1
so has part: feature:186032-186265:1:exon
subclass of: SO_0000010

position:186032:1
position: 186032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186265:1
position: 186265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186032-186265:1:exon

SJ05684_RS28130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28130
old locus tag: SJ05684_a39010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018327668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6429 family protein
translation: MEIDEDKIDDAVLALLWLTLHNERCAWKGFDWATTDRLHKKGMIGDPVNKSKSLILTDEGLERSEALFRELFTRPPQ
SIO_010081: SJ05684_RS28130
subclass of: SO_0000673
so part of: SJ05684_RS28130
location: 186032..186265
location: region:186032-186265:1
so has part: feature:186032-186265:1:exon

WP_014330863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186032-186265:1:exon

SJ05684_RS28135
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28135
old locus tag: SJ05684_a39020
so part of: sequence
location: complement(186246..187946)
location: region:186246-187946:-1
so has part: feature:186246-187946:-1:exon
subclass of: SO_0000010

position:186246:-1
position: 186246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187946:-1
position: 187946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186246-187946:-1:exon

SJ05684_RS28135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28135
old locus tag: SJ05684_a39020
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328351.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MTSKPVDLPADLASAYLALLSEREMLQAERDVVVAERDTVVAERDIAVAQAANAQAMLSDSEALIASLELAIEKLKRELRGRRSERTARLIDQMELQLEELVMAATEDEAAAQAAAAKTSSVRSFTRKRPVRKPWPEDIERERVVIDPPVTCACCGGSRLSKLGEDVTETLEEVPRRFKVIETVREKFTCRDCEAISQPPAPFHATPRGFIGPHLLATILFDKFGMHSPLNRQSTRFKCEGIELSTSTLADQVGYGTAALLPIFDLIEAHVFAAERLFGDDTTIPIQAKDKCTTGRIWTYVCDDRPYGGAAAPAAIYYASSDRRGEHPQKHLAGYGGILQSDCYNGFEPLSVAEKKAVPITFAFCHAHARRKFFELADIQKNARDRKRKGKPISPIALEAVQRYDALFEIEREINGLSAEERLAARQEKSKPLFDDMHEWLKRERAMLSKSSEAIEPIDYMLKRWDGFARFLEDGRICLTNNAAERALRGIALGRRNWTFAGSQRGADRAAIMLSVITTCRLNDVDPKAWLADVFARIADLPVSRLHELLPWQWKTHKGTAIAAAA
SIO_010081: SJ05684_RS28135
subclass of: SO_0000673
so part of: SJ05684_RS28135
location: complement(186246..187946)
location: region:186246-187946:-1
so has part: feature:186246-187946:-1:exon

WP_014330862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186246-187946:-1:exon

SJ05684_RS28140
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS28140
old locus tag: SJ05684_a39030
so part of: sequence
location: complement(187992..188330)
location: region:187992-188330:-1
so has part: feature:187992-188330:-1:exon
subclass of: SO_0000010

position:187992:-1
position: 187992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188330:-1
position: 188330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187992-188330:-1:exon

SJ05684_RS28140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS28140
old locus tag: SJ05684_a39030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009465831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MGTGVKVWLSTGYTDMRCGFPSLALRVQEVLKRDPLSGHLFVFRGRRSDILKIIWHDGLGACLFTRRLEKGRFIWPNMEGGAVAISPAQLSYLLSGIDWRNPQETWRPTRVG
SIO_010081: SJ05684_RS28140
subclass of: SO_0000673
so part of: SJ05684_RS28140
location: complement(187992..188330)
location: region:187992-188330:-1
so has part: feature:187992-188330:-1:exon

WP_080577875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187992-188330:-1:exon

SJ05684_RS28145
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28145
so part of: sequence
location: complement(188342..188713)
location: region:188342-188713:-1
so has part: feature:188342-188713:-1:exon
subclass of: SO_0000010

position:188342:-1
position: 188342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188713:-1
position: 188713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188342-188713:-1:exon

SJ05684_RS28145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28145
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636077.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDRVEIVDTGRRRRFSKEMKLQIVAESYLEPGLCATTARRHGISRSQLYEWRRLARAWQLDVASPVGGFVPALLVPEVEPAAGSLPNAGRMEVVSANGRRVIVDRDVDVEALLRIMRGLEALR
SIO_010081: SJ05684_RS28145
subclass of: SO_0000673
so part of: SJ05684_RS28145
location: complement(188342..188713)
location: region:188342-188713:-1
so has part: feature:188342-188713:-1:exon

WP_014330860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188342-188713:-1:exon

SJ05684_RS28150
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28150
old locus tag: SJ05684_a39050
so part of: sequence
location: 188792..189622
location: region:188792-189622:1
so has part: feature:188792-189622:1:exon
subclass of: SO_0000010

position:188792:1
position: 188792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189622:1
position: 189622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188792-189622:1:exon

SJ05684_RS28150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28150
old locus tag: SJ05684_a39050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 16 protein
translation: MRTVIYRQYNLLCFAFFVFAAPTAGAQEAKIPEGYRLVWSDEFDRAGLPDPAKWVYDTEGNKSGWYNNEKQYYAVKRRKNGRGKDGKLIITARKERLTSASDYGGQNYTSARLITRGKAAWVYGHFAIRARLPCGRGTWPAFWMLGADKTPWPENGEIDIMEQVGSAPDKIKGTIHTKATARTFGIGGETVLSDACRRFHIYTLTWTPTAISIGVNGHSYFTYKNPQEGSSSWPFDTPHFLLLNLAIGGDMAGKIDDAIFPVSMDIDYVRVYQKVN
SIO_010081: SJ05684_RS28150
subclass of: SO_0000673
so part of: SJ05684_RS28150
location: 188792..189622
location: region:188792-189622:1
so has part: feature:188792-189622:1:exon

WP_034859935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188792-189622:1:exon

SJ05684_RS28155
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28155
old locus tag: SJ05684_a39060
so part of: sequence
location: 189878..190711
location: region:189878-190711:1
so has part: feature:189878-190711:1:exon
subclass of: SO_0000010

position:189878:1
position: 189878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190711:1
position: 190711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189878-190711:1:exon

SJ05684_RS28155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28155
old locus tag: SJ05684_a39060
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS28155
subclass of: SO_0000673
so part of: SJ05684_RS28155
location: 189878..190711
location: region:189878-190711:1
so has part: feature:189878-190711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189878-190711:1:exon

SJ05684_RS28160
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28160
so part of: sequence
location: complement(190731..191327)
location: region:190731-191327:-1
so has part: feature:190731-191327:-1:exon
subclass of: SO_0000010

position:190731:-1
position: 190731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191327:-1
position: 191327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190731-191327:-1:exon

SJ05684_RS28160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHSERPPDVRFTPLFDPVTDAFCWVTPFMTMEKGWDMKNVAYLLDPETTLFRTVEVADGTGLAPIFSLLGCRLVQMIRFDDSHALFLDDEGLRDGITAFTVFASYPQPLGGRIVLIRGDGSEPHFSPSIKIEDAAVHFKCCRPVLDPVFVTADDATPKGLILPGALSDLKVRIEQRPPMLMDGRHDVYRAHGDGLNS
SIO_010081: SJ05684_RS28160
subclass of: SO_0000673
so part of: SJ05684_RS28160
location: complement(190731..191327)
location: region:190731-191327:-1
so has part: feature:190731-191327:-1:exon

WP_223843497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190731-191327:-1:exon

SJ05684_RS30160
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30160
so part of: sequence
location: complement(191435..191809)
location: region:191435-191809:-1
so has part: feature:191435-191809:-1:exon
subclass of: SO_0000010

position:191435:-1
position: 191435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191809:-1
position: 191809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191435-191809:-1:exon

SJ05684_RS30160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858081.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIRKSAWPLWQAAPARLLLEARLAADCYTTPWDIIIWLKPITVEDPSRADHWYVILDRTCTMPPALSSVMSADESLRNTNCAYRNDPGFTNTVRLRVGITGMKSKWVARFVSESLSDWTRSHS
SIO_010081: SJ05684_RS30160
subclass of: SO_0000673
so part of: SJ05684_RS30160
location: complement(191435..191809)
location: region:191435-191809:-1
so has part: feature:191435-191809:-1:exon

WP_083846293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191435-191809:-1:exon

SJ05684_RS28170
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28170
old locus tag: SJ05684_a39080
so part of: sequence
location: 191937..192974
location: region:191937-192974:1
so has part: feature:191937-192974:1:exon
subclass of: SO_0000010

position:191937:1
position: 191937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192974:1
position: 192974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191937-192974:1:exon

SJ05684_RS28170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28170
old locus tag: SJ05684_a39080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913673.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MPVVAVGLDLAKTVFQAHGVDDAGQTVLRRRLGRSELLAFFAKLPPCLIAMEACSSAHHWARELVTIGHDVRLIPPQYVKPCVKRNKTDAADAEAICEAATRPNMRFVPIKTRDQQAVLALHRSRSLLVRQRTASINAVRGLVGEFGLIAAKGRYRMSELRQRTNAMTPDHLPAIACQAINTLFDHIDMLEEQIAAVERQIVEWHKNNEDSRRLATAPGVGPITASAIVAAVGDGCQFQSARHFAAWLGLTPRMHASGRKERIGRISKGGDRYLRALLIHGARAIVGTLFRKNVPPRPWLLALAARRPTNVTAVAVAHKTARALWAMLTRDEKYRKPIAATPSAA
SIO_010081: SJ05684_RS28170
subclass of: SO_0000673
so part of: SJ05684_RS28170
location: 191937..192974
location: region:191937-192974:1
so has part: feature:191937-192974:1:exon

WP_014858080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191937-192974:1:exon

SJ05684_RS28175
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28175
old locus tag: SJ05684_a39090
pseudo: true
so part of: sequence
location: complement(193127..>193477)
location: region:193127-193477:-1
so has part: feature:193127-193477:-1:exon
subclass of: SO_0000010

position:193127:-1
position: 193127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193477:-1
position: 193477
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193127-193477:-1:exon

SJ05684_RS28175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28175
old locus tag: SJ05684_a39090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS28175
subclass of: SO_0000673
so part of: SJ05684_RS28175
location: complement(193127..>193477)
location: region:193127-193477:-1
so has part: feature:193127-193477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193127-193477:-1:exon

SJ05684_RS30780
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30780
pseudo: true
so part of: sequence
location: complement(<193623..>193787)
location: region:193623-193787:-1
so has part: feature:193623-193787:-1:exon
subclass of: SO_0000010

position:193623:-1
position: 193623
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:193787:-1
position: 193787
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193623-193787:-1:exon

SJ05684_RS30780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014526622.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SJ05684_RS30780
subclass of: SO_0000673
so part of: SJ05684_RS30780
location: complement(<193623..>193787)
location: region:193623-193787:-1
so has part: feature:193623-193787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193623-193787:-1:exon

SJ05684_RS30165
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30165
old locus tag: SJ05684_a39120
so part of: sequence
location: 194167..194316
location: region:194167-194316:1
so has part: feature:194167-194316:1:exon
subclass of: SO_0000010

position:194167:1
position: 194167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194316:1
position: 194316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194167-194316:1:exon

SJ05684_RS30165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30165
old locus tag: SJ05684_a39120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLGIVRVKLLRLAERRGWQEADFSRLSADQTLDMTAEGGLTRRSPFDC
SIO_010081: SJ05684_RS30165
subclass of: SO_0000673
so part of: SJ05684_RS30165
location: 194167..194316
location: region:194167-194316:1
so has part: feature:194167-194316:1:exon

WP_161623565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194167-194316:1:exon

SJ05684_RS28190
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28190
old locus tag: SJ05684_a39130
so part of: sequence
location: complement(194331..196031)
location: region:194331-196031:-1
so has part: feature:194331-196031:-1:exon
subclass of: SO_0000010

position:194331:-1
position: 194331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196031:-1
position: 196031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194331-196031:-1:exon

SJ05684_RS28190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28190
old locus tag: SJ05684_a39130
EC number: 1.14.13.-
inference: COORDINATES: protein motif:HMM:NF012946.2
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MLTVSEAEPIPPEYADMMLHKLRRYAGAIPDPVSLPKGFRVLIIRAGMSGVAAAIRLRQLGISYIQVEKQDSTGGVWHAHHYPGCGVDTPGHLYSYTLASGNWSTFFPLQKEIDDYFNRVARDFGIESSIRYGTECLVTRYDEESLTWHSRLRLPNGTEETLVTNVVLSAVGGFTTPKWPNLSGLRNFDGPVVHTSEWDPEVALDGKRVAVIGNGASAMQVVPAIADRVGALTIFQRSRQWVAPFPKFQKPVLEPMQFLFREVPHYEWLYRLRLSWIYDSEVHEALHKDPAWPHPDRSVNAVNDRDRETYTQYIEGQLAGRPDLIAKVIPSYPPFGKRMLLDNGWYRTLLKPHVTLVDGAAARVEGRSIHAIDDETHEAELIIVASGYDTTRYLLPVEVIGRNGRTVRDVWDDDDCQAYLGTVVAGFPNFFMLYGPNTALGHRGSFIFTIESQIDYVLSVLRQMGEKRLVEVECRQDIYQHYNRKIQQMHQQMIWSHEGMSTFFRNDRGRIVTNSPWRLVDYWKLLKEADLDDYRTMPQVDSRLETSGVPREGVQRPGSRLRRRPS
SIO_010081: SJ05684_RS28190
subclass of: SO_0000673
so part of: SJ05684_RS28190
location: complement(194331..196031)
location: region:194331-196031:-1
so has part: feature:194331-196031:-1:exon

WP_014858075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194331-196031:-1:exon

SJ05684_RS30170
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30170
pseudo: true
so part of: sequence
location: <196944..197458
location: region:196944-197458:1
so has part: feature:196944-197458:1:exon
subclass of: SO_0000010

position:196944:1
position: 196944
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:197458:1
position: 197458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196944-197458:1:exon

SJ05684_RS30170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084703.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: SJ05684_RS30170
subclass of: SO_0000673
so part of: SJ05684_RS30170
location: <196944..197458
location: region:196944-197458:1
so has part: feature:196944-197458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196944-197458:1:exon

SJ05684_RS28205
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28205
old locus tag: SJ05684_a39160
so part of: sequence
location: 197498..198520
location: region:197498-198520:1
so has part: feature:197498-198520:1:exon
subclass of: SO_0000010

position:197498:1
position: 197498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198520:1
position: 198520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197498-198520:1:exon

SJ05684_RS28205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28205
old locus tag: SJ05684_a39160
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971054.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQITTVGLDLAKSVFQAHGVDETGATVLVKRLHRKQMLPFFSKLPPCLIGMEACGTAHHWARTLAAMGHEVRLIPPSYVKPYVKRGKSDALDAEAICEAVQRPTMRFVPVKTVAQQSILMTHRARSLLVRQRTMVANALRAHLAELGLVANPGIANLAKLAQQALSGESSLPSYARTTLDILIRQILVFADEIAALDQQLLAWHADSEASRRLSAIPGLGIVTATAVAATVTDPEQFRSGRQFAAWLGLTPQQCSTGGKTQLGGISKQGDRYLRRLLVVGATAVIRHTKDKATPLANWIRKLLEKKPFRLVSVALANKLARIAWVVLTRKEAYRAHEMIA
SIO_010081: SJ05684_RS28205
subclass of: SO_0000673
so part of: SJ05684_RS28205
location: 197498..198520
location: region:197498-198520:1
so has part: feature:197498-198520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197498-198520:1:exon

SJ05684_RS28210
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28210
old locus tag: SJ05684_a39170
so part of: sequence
location: complement(198673..198936)
location: region:198673-198936:-1
so has part: feature:198673-198936:-1:exon
subclass of: SO_0000010

position:198673:-1
position: 198673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198936:-1
position: 198936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198673-198936:-1:exon

SJ05684_RS28210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28210
old locus tag: SJ05684_a39170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYHNWLDRWDERRARRGEEAKKVTNFILDAGRAFPAEKRIETIDEFCVLADQALSDSYVDAPYGKGFLSGGLIGCFHMSGLFVRYEV
SIO_010081: SJ05684_RS28210
subclass of: SO_0000673
so part of: SJ05684_RS28210
location: complement(198673..198936)
location: region:198673-198936:-1
so has part: feature:198673-198936:-1:exon

WP_015633467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198673-198936:-1:exon

SJ05684_RS28220
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28220
so part of: sequence
location: complement(199209..199718)
location: region:199209-199718:-1
so has part: feature:199209-199718:-1:exon
subclass of: SO_0000010

position:199209:-1
position: 199209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199718:-1
position: 199718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199209-199718:-1:exon

SJ05684_RS28220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28220
EC number: 2.1.1.44
inference: COORDINATES: protein motif:HMM:NF021530.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-histidine N(alpha)-methyltransferase
translation: MFGRTFGNLAVPTNDTHPMEAVVETLKKISNSAKRCWVAISIGSDLRRDVAKSYYEAHPEFQLNVFYRMKAELPVDGNFDPEAFEYEPDVIGGDQFMQVIHTAVVKKNLDFCIGGKDIILLSGERLHLKNSFCFSESFFKKCAHRAGFVPIDVLSDDAGSAIHVLQKVN
SIO_010081: SJ05684_RS28220
subclass of: SO_0000673
so part of: SJ05684_RS28220
location: complement(199209..199718)
location: region:199209-199718:-1
so has part: feature:199209-199718:-1:exon

WP_231698953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199209-199718:-1:exon

SJ05684_RS28225
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28225
so part of: sequence
location: complement(199907..200967)
location: region:199907-200967:-1
so has part: feature:199907-200967:-1:exon
subclass of: SO_0000010

position:199907:-1
position: 199907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200967:-1
position: 200967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199907-200967:-1:exon

SJ05684_RS28225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS28225
subclass of: SO_0000673
so part of: SJ05684_RS28225
location: complement(join(199907..200475,200475..200967))
location: region:199907-200967:-1
so has part: feature:200475-200967:-1:exon
so has part: feature:199907-200475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200475-200967:-1:exon

position:200475:-1
position: 200475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199907-200475:-1:exon

SJ05684_RS28235
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28235
pseudo: true
so part of: sequence
location: <201692..>201875
location: region:201692-201875:1
so has part: feature:201692-201875:1:exon
subclass of: SO_0000010

position:201692:1
position: 201692
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:201875:1
position: 201875
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201692-201875:1:exon

SJ05684_RS28235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: SJ05684_RS28235
subclass of: SO_0000673
so part of: SJ05684_RS28235
location: <201692..>201875
location: region:201692-201875:1
so has part: feature:201692-201875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201692-201875:1:exon

SJ05684_RS28240
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28240
old locus tag: SJ05684_a39210
pseudo: true
so part of: sequence
location: complement(<201890..>202024)
location: region:201890-202024:-1
so has part: feature:201890-202024:-1:exon
subclass of: SO_0000010

position:201890:-1
position: 201890
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:202024:-1
position: 202024
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201890-202024:-1:exon

SJ05684_RS28240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28240
old locus tag: SJ05684_a39210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_043767036.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: SJ05684_RS28240
subclass of: SO_0000673
so part of: SJ05684_RS28240
location: complement(<201890..>202024)
location: region:201890-202024:-1
so has part: feature:201890-202024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201890-202024:-1:exon

SJ05684_RS28245
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28245
old locus tag: SJ05684_a39220
so part of: sequence
location: complement(202045..202335)
location: region:202045-202335:-1
so has part: feature:202045-202335:-1:exon
subclass of: SO_0000010

position:202045:-1
position: 202045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202335:-1
position: 202335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202045-202335:-1:exon

SJ05684_RS28245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28245
old locus tag: SJ05684_a39220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYRNSALYTLKYVAAMLDEDEDFLRECSIEMFSEDGCLWAYDDYPASELSEHIILFTQVGIENLQQIIRNLRGIGDPPSKPVAERNRKKPRLLRS
SIO_010081: SJ05684_RS28245
subclass of: SO_0000673
so part of: SJ05684_RS28245
location: complement(202045..202335)
location: region:202045-202335:-1
so has part: feature:202045-202335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202045-202335:-1:exon

SJ05684_RS28250
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28250
old locus tag: SJ05684_a39230
so part of: sequence
location: complement(202365..202976)
location: region:202365-202976:-1
so has part: feature:202365-202976:-1:exon
subclass of: SO_0000010

position:202365:-1
position: 202365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202976:-1
position: 202976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202365-202976:-1:exon

SJ05684_RS28250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28250
old locus tag: SJ05684_a39230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009798294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MTVDRIARLHIQLDDIEPLIWRRVEVPLTMSLKGLHDVIQAVMLFEDYHLFEFEAGGRCYDVPDPEDLYERKTFAARNVRIAALIERGIATFSYTYDFGDNWRHTITVEAVEDGNPSIEYPRFIDGERRAPPEDVGSTSGFEEFLNVMAKPRHAQHREFVRWYGGRFDPEDLSVDIIQDRVAKIARRRTLGKAGFAKSQNQQH
SIO_010081: SJ05684_RS28250
subclass of: SO_0000673
so part of: SJ05684_RS28250
location: complement(202365..202976)
location: region:202365-202976:-1
so has part: feature:202365-202976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202365-202976:-1:exon

SJ05684_RS28255
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28255
old locus tag: SJ05684_a39240
so part of: sequence
location: complement(202973..204559)
location: region:202973-204559:-1
so has part: feature:202973-204559:-1:exon
subclass of: SO_0000010

position:202973:-1
position: 202973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204559:-1
position: 204559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202973-204559:-1:exon

SJ05684_RS28255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28255
old locus tag: SJ05684_a39240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MILAERAARREAEAVAARAQAVNSHSDALIARLRLEIEKLKRDIHGSRSERKARLLEQMELQLEELEADASQDELAAELAARSSTVRAFERKRPSRKPFPEHLPRERVVIAPPTSCPCCGSAKLAKLGEDIAETLEVIPRQWKVIQTVREKFSCRECEKIAQPPAPFHVTPRGFAGPNLLAMILFEKFGQHQPLNRQSERYAREGVDLSLSTLADQVGACAAVLKPLHGLIEAHVLTAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFSGTSPPAALYYASRDRRQEHPERHLKTFTGILQADAYGGYNPLFKMDRDSGPLTQALCWSHSRRKFFVLADIATNAKRGKNATPISPVALEAVKRIDALFDIERDINRLAASERLARRQRDSRRLVEELEAWMRAERTKLSRSSPVAEPIDYMLKRWEGFTSFLGDGRICLTNNAAERALRGFALGRKSWLFAGSDRGADRAAFMATMIMTAKLNDVDPQAWLADVLARIADTPTTKLAELLPWNWTGPRPMMALAS
SIO_010081: SJ05684_RS28255
subclass of: SO_0000673
so part of: SJ05684_RS28255
location: complement(202973..204559)
location: region:202973-204559:-1
so has part: feature:202973-204559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202973-204559:-1:exon

SJ05684_RS28260
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS28260
old locus tag: SJ05684_a39250
so part of: sequence
location: complement(204656..205003)
location: region:204656-205003:-1
so has part: feature:204656-205003:-1:exon
subclass of: SO_0000010

position:204656:-1
position: 204656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205003:-1
position: 205003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204656-205003:-1:exon

SJ05684_RS28260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS28260
old locus tag: SJ05684_a39250
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPSGVKVWLATGYTDMRRGFPGLSLMVQETLKRDPHSGHLFCFRGRKGGLIKVIWHDGQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPSSAG
SIO_010081: SJ05684_RS28260
subclass of: SO_0000673
so part of: SJ05684_RS28260
location: complement(204656..205003)
location: region:204656-205003:-1
so has part: feature:204656-205003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204656-205003:-1:exon

SJ05684_RS28265
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28265
so part of: sequence
location: complement(205000..205392)
location: region:205000-205392:-1
so has part: feature:205000-205392:-1:exon
subclass of: SO_0000010

position:205000:-1
position: 205000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205392:-1
position: 205392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205000-205392:-1:exon

SJ05684_RS28265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28265
function: Transposase and inactivated derivatives
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKQHIEVITSVERRRHWSREEKERLVAAALEPGTVVSDVARSAGIHVSQLFRWRKELCQMSAPSVPPFIPIEVVAALPAPDPLETTPAPRARKKPSIVTIELGRGRRIRVESDVDTEALGRILDVVERR
SIO_010081: SJ05684_RS28265
subclass of: SO_0000673
so part of: SJ05684_RS28265
location: complement(205000..205392)
location: region:205000-205392:-1
so has part: feature:205000-205392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205000-205392:-1:exon

SJ05684_RS29890
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29890
old locus tag: SJ05684_a39270
so part of: sequence
location: complement(205442..205609)
location: region:205442-205609:-1
so has part: feature:205442-205609:-1:exon
subclass of: SO_0000010

position:205442:-1
position: 205442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205609:-1
position: 205609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205442-205609:-1:exon

SJ05684_RS29890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29890
old locus tag: SJ05684_a39270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGGLPEIKPHSEDFRNLVLDLVREHYLDFGPTLAAEKLIERHRLAGIPTVTAVL
SIO_010081: SJ05684_RS29890
subclass of: SO_0000673
so part of: SJ05684_RS29890
location: complement(205442..205609)
location: region:205442-205609:-1
so has part: feature:205442-205609:-1:exon

WP_014857776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205442-205609:-1:exon

SJ05684_RS30785
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30785
old locus tag: SJ05684_a39280
so part of: sequence
location: 205738..206103
location: region:205738-206103:1
so has part: feature:205738-206103:1:exon
subclass of: SO_0000010

position:205738:1
position: 205738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206103:1
position: 206103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205738-206103:1:exon

SJ05684_RS30785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30785
old locus tag: SJ05684_a39280
inference: COORDINATES: protein motif:HMM:NF018755.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1353 domain-containing protein
translation: MKTMVAMLLAAVGVAVSASSTLAVNFCQSNKDRNCFTGSFGLVDIPGDASHKLLKADFGYVDLNGVGWQTNKETKTDGASIPPLLQPFVGSPWEDGYIRAAVIHVLRQARSNLERDASRLL
SIO_010081: SJ05684_RS30785
subclass of: SO_0000673
so part of: SJ05684_RS30785
location: 205738..206103
location: region:205738-206103:1
so has part: feature:205738-206103:1:exon

WP_014857774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205738-206103:1:exon

SJ05684_RS30790
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30790
old locus tag: SJ05684_a39290
so part of: sequence
location: 206108..206452
location: region:206108-206452:1
so has part: feature:206108-206452:1:exon
subclass of: SO_0000010

position:206108:1
position: 206108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206452:1
position: 206452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206108-206452:1:exon

SJ05684_RS30790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30790
old locus tag: SJ05684_a39290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLASGLEKPKAKLLFYAVYAFGPRWGYLVPGEKCAAGKNCIQMTGKDAAFVQLPGELADQSSAGELKAIKATIDLKERSGDALTLDELMAIADEAHPQQTLRDQRPAGGDEITK
SIO_010081: SJ05684_RS30790
subclass of: SO_0000673
so part of: SJ05684_RS30790
location: 206108..206452
location: region:206108-206452:1
so has part: feature:206108-206452:1:exon

WP_014857773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206108-206452:1:exon

SJ05684_RS28275
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28275
old locus tag: SJ05684_a39300
so part of: sequence
location: 206709..207578
location: region:206709-207578:1
so has part: feature:206709-207578:1:exon
subclass of: SO_0000010

position:206709:1
position: 206709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207578:1
position: 207578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206709-207578:1:exon

SJ05684_RS28275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28275
old locus tag: SJ05684_a39300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857771.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTDAPAAVNPLRRRMIDDMTLRNLSPATQRSYLHAVTKFSRYFGRSPDRLGLEDVRAFQVYLVSQGVSWPALNQTVCALRFFYGVTLDRAELPERIAYARTPRKLPAILSADEVVRFLEAVPSLKARTALTTAYAAGLRASEAVSLKVADIDSQRMVIQVRHGKGAKDRTVMLSPQLLGILRTYWRLARPKDWLFPGRGDKPIDVQVLYAACRSATKAAGLTKRVSVHTLRHSFATHLLESGVDIRIIQVLLGHTHLSTTAHYTQVATTTIARTESPLDRLRLEVVPPV
SIO_010081: SJ05684_RS28275
subclass of: SO_0000673
so part of: SJ05684_RS28275
location: 206709..207578
location: region:206709-207578:1
so has part: feature:206709-207578:1:exon

WP_014857771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206709-207578:1:exon

SJ05684_RS28280
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28280
old locus tag: SJ05684_a39310
so part of: sequence
location: 207588..208763
location: region:207588-208763:1
so has part: feature:207588-208763:1:exon
subclass of: SO_0000010

position:207588:1
position: 207588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208763:1
position: 208763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207588-208763:1:exon

SJ05684_RS28280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28280
old locus tag: SJ05684_a39310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612306.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91 family transposase
translation: MRPALEVADIFRRHGPAYRRTHDGHLGRGERRVMAAIALCRTAALGGHVETCDDCALSRVAYNSCRNRHCPKCQGATRDRWLTDRQADLLPVPYFHVVFTVPAEIAAIAYQNKRQLYAILFEAAAETLKTIAADPRHLGGELGFLAILHTWGQTLTHHPHLHCLVPGGVLAADGGRWIACRRRRFFLPVRVLSRLFRRLFLERLQAAQTAGGLRFFGALEPLGDGNALARALRPLRKKRWVVYAKPPFGSPERVLAYLGRYTHRVAIANSRLVSADDTGVTFRWRDYRHGNAPRSMTLAPHEFIRRFLLHCLPDGFHRIRHYGFLANGIRRARLAVIRRLLADAPPQRRRAEGSQSGHQRDRFDPSVCPCCGGILRITARLPRARAWPDTS
SIO_010081: SJ05684_RS28280
subclass of: SO_0000673
so part of: SJ05684_RS28280
location: 207588..208763
location: region:207588-208763:1
so has part: feature:207588-208763:1:exon

WP_037437088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207588-208763:1:exon

SJ05684_RS28285
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28285
so part of: sequence
location: 209162..210116
location: region:209162-210116:1
so has part: feature:209162-210116:1:exon
subclass of: SO_0000010

position:209162:1
position: 209162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210116:1
position: 210116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209162-210116:1:exon

SJ05684_RS28285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611156.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGKSYSSDLRDRVVGFVEAGHSRRAAARHFGVSESFAVKLMQRVERHGTAAPVRQGRPPGGRLVAFEAFLVAAVEAKPDITMPELAARLSAERGMKAAPAELSRFLCRRGFTYKKSLMASERARAAIRAERRVWIELRQPRMRLEPHRLVFVDETSVNTKMVRLRGRSLRGTRLIADAPFGHWKTQTFIAGLRCHGITAPWVIEKAINRPAFDTWVETQLAPTLAKGDVVILDNLAFHKSARAAECLRDRGAWFLFLPPYSPDLNPIEMAFAKLKAHLRAAAARTFDALWKAIGNICDLFNRTDCWNYLKEAGYASD
SIO_010081: SJ05684_RS28285
subclass of: SO_0000673
so part of: SJ05684_RS28285
location: join(209162..209509,209511..210116)
location: region:209162-210116:1
so has part: feature:209162-209509:1:exon
so has part: feature:209511-210116:1:exon

WP_086018849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209162-209509:1:exon

position:209509:1
position: 209509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209511-210116:1:exon

position:209511:1
position: 209511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SJ05684_RS28290
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28290
old locus tag: SJ05684_a39340
so part of: sequence
location: complement(210180..212261)
location: region:210180-212261:-1
so has part: feature:210180-212261:-1:exon
subclass of: SO_0000010

position:210180:-1
position: 210180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212261:-1
position: 212261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210180-212261:-1:exon

SJ05684_RS28290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28290
old locus tag: SJ05684_a39340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875340.1
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MTDGSKPTFEIGIAMSGAISAGAYSAGVFDFLIQALDAWEKAKAEGAPDLPEYDVRLKALSGASAGAITAAIGVIAAGGREAPATFPSPAPGSQNIRFTLGRLYRSWVTRPTLVSPDGSPDLLSLKDLAGGRPVISVLNANVLTAIGAEALEATGTLSPRPYVASSLHFYMMLSNLRGVPYAIHFSGGQYNMMTHADRVHYVVEGIGTWKPSPSPFADTDSGTSIAATSLFGATGASTRPPEWLAFANAALASGAFPIGLSPRVIATATSQYAKAKFPISEDQSELKPIPTWPDAWHVPSSQDYPFSFVSVDGGLINNDPFEYVRFTLMKDPPRPNERNAEKTDRAVIMIAPFPEGPPFLGDGEPPLGVLSIARRVVTALRQQVRFKPDQLLAVAAEGTHSRFMISPHRVPPSTPGGEEREETFSIASGLLGGFGGFVLEAFRDHDYQLGRRNCQYFLMRHLTIDKNHQTLHGPEGAAERRNAVISKTLSDGSMHDYVPIIPLVGDALPEVPYPRWARIDENAFALLVKRIEARLVAVARRLVSTETTSARMKLGLNFLLLVGRNRIVDYIRLTLLQELVMRDQIEGWPLPAADLRPDFVRAVLAALLDPAFDLRTEAGIARTTKLDTSLVREILSTLAGAAGANCQVWLAPWTRTDEPLLYTLVSRRPSFLATLLQGRTPARLFAKPVVDRK
SIO_010081: SJ05684_RS28290
subclass of: SO_0000673
so part of: SJ05684_RS28290
location: complement(210180..212261)
location: region:210180-212261:-1
so has part: feature:210180-212261:-1:exon

WP_015633459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210180-212261:-1:exon

SJ05684_RS28295
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28295
old locus tag: SJ05684_a39350
so part of: sequence
location: complement(212340..214130)
location: region:212340-214130:-1
so has part: feature:212340-214130:-1:exon
subclass of: SO_0000010

position:212340:-1
position: 212340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214130:-1
position: 214130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212340-214130:-1:exon

SJ05684_RS28295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28295
old locus tag: SJ05684_a39350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: di-heme-cytochrome C peroxidase
translation: MKRKSRFWPILLGFTVLVAAGLYYVVRMFSVDLPDYPKVDKVTWLEQNWSQSQRGWMHHADQGTVTFSMPYEWLAALEQPTFTLTAGPPFLSSDYLDRFGFITADSSGLPVGFAHGGDLVDPKTAQPWVNPATGRPLTTVGLTCAACHTGRFTYKGTAVMVDGGPALTDLGKFRKASGLALFFTRYAPFRFDRFATAVLGPQADEKARAVLKKQLDKVLAGGRIEVDLEKKVAEKSIEEGFGRLDALNRIGNQVFSLDLERPENYVAQSAPVAFPHIWDTSWFDWVQYNASIMQPMVRNAGEALGVRAFINLTKSEQPLFASTVKVDTIFEIEQQLAGKQPTAENGFTGLRPPRWPSNLFGSIDTKLATEGAAVYADRCQGCHLPPVGSEGFWEQKHWTNENSAGERYLRVPIINVENIGTDPAQAQSMAERKVKLPSELGIDTDSFGSALGALVAKTAARWYDNQTPPVPAEQRGIMNGNRQNGIQAPLAYKGRPLDGIWATPPFLHNGSVPTIDALLSPAGERPKTFWLGNREYDPDKLGYLTDELKGGFKFDTAKPGNSNAGHEFSDTPGPGVIGPALKPDEKAALIAYLKTL
SIO_010081: SJ05684_RS28295
subclass of: SO_0000673
so part of: SJ05684_RS28295
location: complement(212340..214130)
location: region:212340-214130:-1
so has part: feature:212340-214130:-1:exon

WP_014857747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212340-214130:-1:exon

SJ05684_RS28300
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28300
old locus tag: SJ05684_a39360
so part of: sequence
location: complement(214183..214581)
location: region:214183-214581:-1
so has part: feature:214183-214581:-1:exon
subclass of: SO_0000010

position:214183:-1
position: 214183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214581:-1
position: 214581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214183-214581:-1:exon

SJ05684_RS28300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28300
old locus tag: SJ05684_a39360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAEADDDRAPDFLRKDFIHRVRRSDVRYILQAQLRDTPPPPVGNHELFDPSQPWNEYWFPWVDMFEIRLNEVIDDQAAVSRLEMNPNRSPECIRIPLATSPDDYASLGHARAIVYPGARAARAAVPPPQNN
SIO_010081: SJ05684_RS28300
subclass of: SO_0000673
so part of: SJ05684_RS28300
location: complement(214183..214581)
location: region:214183-214581:-1
so has part: feature:214183-214581:-1:exon

WP_014857746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214183-214581:-1:exon

SJ05684_RS28310
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28310
old locus tag: SJ05684_a39370
so part of: sequence
location: 214818..215732
location: region:214818-215732:1
so has part: feature:214818-215732:1:exon
subclass of: SO_0000010

position:214818:1
position: 214818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215732:1
position: 215732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214818-215732:1:exon

SJ05684_RS28310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28310
old locus tag: SJ05684_a39370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857744.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MSRDGTACLVGIEACSGSHYWAREIGALGHEVRLIPPAYVKPFVKRGTTDAADAEAISEAVTRKTMRFVPVKSPEQQAAAMVLKTRALLVRQQTQTINALRAHLSELGIIAGIGTAKIASLIAIVRDETDARLPNAARFALTAIADQIDALALQINKLERELVAEVKHDEDMRRLATIPGVGAITSASIKALVPDPGGFKSGRHFAAWLGLTPRSHSSGGKERLGKISKMGNPELRTLLVAGATSVLRHARGNHKAPRWLVALLARRPFKVVAIALANKMARIIWALLTKGGTYRGLESSAASS
SIO_010081: SJ05684_RS28310
subclass of: SO_0000673
so part of: SJ05684_RS28310
location: 214818..215732
location: region:214818-215732:1
so has part: feature:214818-215732:1:exon

WP_014857744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214818-215732:1:exon

SJ05684_RS28315
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS28315
old locus tag: SJ05684_a39380
so part of: sequence
location: complement(216596..217516)
location: region:216596-217516:-1
so has part: feature:216596-217516:-1:exon
subclass of: SO_0000010

position:216596:-1
position: 216596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217516:-1
position: 217516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216596-217516:-1:exon

SJ05684_RS28315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS28315
old locus tag: SJ05684_a39380
function: DNA replication protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014328473.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MRNAPAIDAATLSTLLNELRLPAIKVLWPDFAERADKEGWPAARFLSVIAEHELAERDRRRIERHLAEARLPPGKTLDSFAFDAVPMVSKAQVMAIAAGDSWLAKGANILLFGPPGGGKSHLAAAIGLALIENGWRVLFMRTTELVQKLQVARRELQLESAIAKLDKFDLLILDDLAYVTKDQAETSVLFELISARYERRSIMITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNVESYRRRSAMEAKRQRGRPASFATIRNAAEIDAARQSETNEALASDNHDDTVADNRDTRISSRLSR
SIO_010081: SJ05684_RS28315
subclass of: SO_0000673
so part of: SJ05684_RS28315
location: complement(216596..217516)
location: region:216596-217516:-1
so has part: feature:216596-217516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216596-217516:-1:exon

SJ05684_RS28320
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS28320
old locus tag: SJ05684_a39390
so part of: sequence
location: complement(217513..218997)
location: region:217513-218997:-1
so has part: feature:217513-218997:-1:exon
subclass of: SO_0000010

position:217513:-1
position: 217513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218997:-1
position: 218997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217513-218997:-1:exon

SJ05684_RS28320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS28320
old locus tag: SJ05684_a39390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488953.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MRLFMKLRQEHRVEVAAAKASLSRATAYRIEKNAQLPSQVKKPRGRRRPDPLADIFDAEVVPLLKAAPGIRPVAVFDEMLRRHPELSEGVRRTMERRIRAWRAINGDEQEVIFRQVHEPGRLGLSDFTNMNELGITIAGQPLDHLLYHFRLAYSGFEHAHVVLGGESFVALAEGLQNALWFLGGAPLYHRSDSLSAAFRNLDADAKEDQTRRYAELCAHYRMTPTRNNKGIAHENGAIESPHGHLKNAIRDALLLRGTRDFDDLDGYRGFIDEIVSRRNARYGKRIDAERAALQPLPGTRTSDFEEVVVRVSRSGGFTLRKVFYTVPSRLIGHRLRVRLYDERLDLFIGGTHLMTLQRGRAHASGKHDQVVDYRHVIHSLRKKPMALLQLVYRDKLFPRQEYRRAFETLLDRLSDKQACKITVELLALAHDRGCERELAERLAKTLDAGELPDIIALRTFFAPDPAQLPTVNVRLASLQGYEALIDARHLEDAA
SIO_010081: SJ05684_RS28320
subclass of: SO_0000673
so part of: SJ05684_RS28320
location: complement(217513..218997)
location: region:217513-218997:-1
so has part: feature:217513-218997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217513-218997:-1:exon

SJ05684_RS28330
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28330
so part of: sequence
location: 219590..219880
location: region:219590-219880:1
so has part: feature:219590-219880:1:exon
subclass of: SO_0000010

position:219590:1
position: 219590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219880:1
position: 219880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219590-219880:1:exon

SJ05684_RS28330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28330
inference: COORDINATES: protein motif:HMM:NF018596.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirK family protein
translation: MCTPATADTPSTKTRGGVSIDGYRITSDGTLAFADQHFTIDRDGKPVVQFLRYRIRPDGGAEFTMVVFNVPSYERKGTSLVYKCSIGHGLSFFSSP
SIO_010081: SJ05684_RS28330
subclass of: SO_0000673
so part of: SJ05684_RS28330
location: 219590..219880
location: region:219590-219880:1
so has part: feature:219590-219880:1:exon

WP_014857679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219590-219880:1:exon

SJ05684_RS28335
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28335
old locus tag: SJ05684_a39400
so part of: sequence
location: complement(220012..221427)
location: region:220012-221427:-1
so has part: feature:220012-221427:-1:exon
subclass of: SO_0000010

position:220012:-1
position: 220012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221427:-1
position: 221427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220012-221427:-1:exon

SJ05684_RS28335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28335
old locus tag: SJ05684_a39400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM family RiPP maturation amino acid epimerase
translation: MSHIKRFMERLAGDIKFRTAVSESADAPRAVTERYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDEYMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDELGGSAPSITHPIIAFELREGCTVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQYDRFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRAFSPEELTGVELIMQGKDAPTAKAFTGRARKRKEKLSARQEAIALTERNHTTIACVSGFLVNMPQRRLQLVTPVPGSERWPLGYRIVGQRSFRTPDEFRDGLKSMIDQHMLESPAPDLPIRFRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGMSVLAVADLLDQLYAAGVIEEDLGDRYAWQTSDGMKDRIEEAQG
SIO_010081: SJ05684_RS28335
subclass of: SO_0000673
so part of: SJ05684_RS28335
location: complement(220012..221427)
location: region:220012-221427:-1
so has part: feature:220012-221427:-1:exon

WP_080577877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220012-221427:-1:exon

SJ05684_RS28340
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28340
old locus tag: SJ05684_a39410
so part of: sequence
location: 221567..222400
location: region:221567-222400:1
so has part: feature:221567-222400:1:exon
subclass of: SO_0000010

position:221567:1
position: 221567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222400:1
position: 222400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221567-222400:1:exon

SJ05684_RS28340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28340
old locus tag: SJ05684_a39410
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS28340
subclass of: SO_0000673
so part of: SJ05684_RS28340
location: 221567..222400
location: region:221567-222400:1
so has part: feature:221567-222400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221567-222400:1:exon

SJ05684_RS28345
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28345
so part of: sequence
location: complement(222540..222917)
location: region:222540-222917:-1
so has part: feature:222540-222917:-1:exon
subclass of: SO_0000010

position:222540:-1
position: 222540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222917:-1
position: 222917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222540-222917:-1:exon

SJ05684_RS28345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARADVERFVNDLDKGRLPANLKPSATGLAPIVAIGKSLGYNITLDEVQNYIRLDSRRKSTGKKLDAMANSKRGSRVPALPRFVQSTALDSPVTDGLTRPLHMAEKGAAVAAVVQLVVIVVHVSS
SIO_010081: SJ05684_RS28345
subclass of: SO_0000673
so part of: SJ05684_RS28345
location: complement(222540..222917)
location: region:222540-222917:-1
so has part: feature:222540-222917:-1:exon

WP_014857677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222540-222917:-1:exon

SJ05684_RS28355
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifW
locus tag: SJ05684_RS28355
old locus tag: SJ05684_a39420
pseudo: true
so part of: sequence
location: complement(<223644..224009)
location: region:223644-224009:-1
so has part: feature:223644-224009:-1:exon
subclass of: SO_0000010

position:223644:-1
position: 223644
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:224009:-1
position: 224009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223644-224009:-1:exon

SJ05684_RS28355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifW
locus tag: SJ05684_RS28355
old locus tag: SJ05684_a39420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004126055.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase stabilizing/protective protein NifW
SIO_010081: SJ05684_RS28355
subclass of: SO_0000673
so part of: SJ05684_RS28355
location: complement(<223644..224009)
location: region:223644-224009:-1
so has part: feature:223644-224009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223644-224009:-1:exon

SJ05684_RS28360
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifS
locus tag: SJ05684_RS28360
old locus tag: SJ05684_a39430
so part of: sequence
location: complement(224173..225336)
location: region:224173-225336:-1
so has part: feature:224173-225336:-1:exon
subclass of: SO_0000010

position:224173:-1
position: 224173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225336:-1
position: 225336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224173-225336:-1:exon

SJ05684_RS28360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifS
locus tag: SJ05684_RS28360
old locus tag: SJ05684_a39430
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857675.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase NifS
translation: MRPIYLDNNATTRVDAEVLQAMLPFFADVFGNASSMHDAGATAGAAINVARRQLQALIGAKFDPEITFTSGGTESNNAAILSGLEAMPERTEIVTSAVEHPAVLTLCTHLEKTRGTKVHKVPVDHQGRLDLDAYQDALTHRVAIVSIMWANNETGTLFPVVKLAEMAKKVGAIFHTDAVQAVGKLPIDLKSTAIDMLSLSAHKFHGPKGVGALYIKRGVPFHALIKGGHQERDRRAGTENTPGIVGLGKAAELALDCMDKDNAIIRSFRDRLEKGLLERVPQVFVMGDPVTRLPNTTSIAFEGVGGEAMQFLLNRHGIACSSGTACTSRSLSTSHVLKAMGTPHRQAVGAVRFSLSGYNCEEDIDRVLQVIPAVVKKLRESRPVFAG
SIO_010081: SJ05684_RS28360
subclass of: SO_0000673
so part of: SJ05684_RS28360
location: complement(224173..225336)
location: region:224173-225336:-1
so has part: feature:224173-225336:-1:exon

WP_014857675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224173-225336:-1:exon

SJ05684_RS28370
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28370
old locus tag: SJ05684_a39450
so part of: sequence
location: complement(226334..228202)
location: region:226334-228202:-1
so has part: feature:226334-228202:-1:exon
subclass of: SO_0000010

position:226334:-1
position: 226334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228202:-1
position: 228202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226334-228202:-1:exon

SJ05684_RS28370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28370
old locus tag: SJ05684_a39450
function: ABC-type oligopeptide transport system,periplasmic component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014766591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MLDIGVIGRLKFATAFMAMSLLLVPAAEAHEQPVWHYGLSLVDDLKYPPGFKKFDYVNPEAPKGGDLRLSQTGTFDTFNPLLVKGETAVGLDFVFDTLMKPSEDEISTAYGLLAEGVSFPDDISSATFRLRQEAKWADGKPVTPEDVVFSFDKAKELNPLYQSYYRHVVKAEKTGDRDVTFHFDDKNNHELPHILGQIRIVPKHWWEGTGPDGKPRDISRTTLEPVMGSGPYRIASFAPGGTIRYERRPDYWGVALNVNVGQNNFDSITYSFFGDRDVEFEAFRSGNTDYWRENQAMRWATAFDFPAVKDGRVKREEIPNPFRATAVMQAMVPNMRRKPFDDERVRQALNYALDFEELNRTIFYNQYQRVNSFFFATELASSGLPEGKELKNLNEVKDLVPPEVFTTPYSNPVGGTPQKARENLRKAIELLNKAGFELNGNRMVNTETGKPFSFEIMLSSPSFERVALPYAQNLKRIGIEARVRTVDPSQYTNRKRAFDYDVTWEVWGQSLSPGNEQADYWGSAAATRQGSRNYAGISDPGVDALIERVIFAKDRETLVAATKALDRVLLAHNYVIPLYYKLAAQIAYWDALARPKELPKYGLGFPEVWWSKSAACHLPASL
SIO_010081: SJ05684_RS28370
subclass of: SO_0000673
so part of: SJ05684_RS28370
location: complement(226334..228202)
location: region:226334-228202:-1
so has part: feature:226334-228202:-1:exon

WP_015633453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226334-228202:-1:exon

SJ05684_RS28375
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28375
pseudo: true
so part of: sequence
location: complement(<228485..228897)
location: region:228485-228897:-1
so has part: feature:228485-228897:-1:exon
subclass of: SO_0000010

position:228485:-1
position: 228485
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:228897:-1
position: 228897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228485-228897:-1:exon

SJ05684_RS28375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014331162.1
note: involved in the transport of C4-dicarboxylates across the membrane; frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: C4-dicarboxylate transporter DctA
SIO_010081: SJ05684_RS28375
subclass of: SO_0000673
so part of: SJ05684_RS28375
location: complement(<228485..228897)
location: region:228485-228897:-1
so has part: feature:228485-228897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228485-228897:-1:exon

SJ05684_RS28380
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28380
pseudo: true
so part of: sequence
location: 229195..230458
location: region:229195-230458:1
so has part: feature:229195-230458:1:exon
subclass of: SO_0000010

position:229195:1
position: 229195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230458:1
position: 230458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229195-230458:1:exon

SJ05684_RS28380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015887115.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS28380
subclass of: SO_0000673
so part of: SJ05684_RS28380
location: 229195..230458
location: region:229195-230458:1
so has part: feature:229195-230458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229195-230458:1:exon

SJ05684_RS28390
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28390
old locus tag: SJ05684_a39500
so part of: sequence
location: 231073..231297
location: region:231073-231297:1
so has part: feature:231073-231297:1:exon
subclass of: SO_0000010

position:231073:1
position: 231073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231297:1
position: 231297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231073-231297:1:exon

SJ05684_RS28390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28390
old locus tag: SJ05684_a39500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRTAEKPFETVENSIVGQSTAIKRGEQLTHAIESQELAGSVFKSTMMVGFELSLNTFAAVQANTFANLHHLRA
SIO_010081: SJ05684_RS28390
subclass of: SO_0000673
so part of: SJ05684_RS28390
location: 231073..231297
location: region:231073-231297:1
so has part: feature:231073-231297:1:exon

WP_014857667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231073-231297:1:exon

SJ05684_RS28395
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28395
old locus tag: SJ05684_a39510
so part of: sequence
location: 231368..232201
location: region:231368-232201:1
so has part: feature:231368-232201:1:exon
subclass of: SO_0000010

position:231368:1
position: 231368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232201:1
position: 232201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231368-232201:1:exon

SJ05684_RS28395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28395
old locus tag: SJ05684_a39510
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS28395
subclass of: SO_0000673
so part of: SJ05684_RS28395
location: 231368..232201
location: region:231368-232201:1
so has part: feature:231368-232201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231368-232201:1:exon

SJ05684_RS30795
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30795
so part of: sequence
location: 233085..233393
location: region:233085-233393:1
so has part: feature:233085-233393:1:exon
subclass of: SO_0000010

position:233085:1
position: 233085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233393:1
position: 233393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233085-233393:1:exon

SJ05684_RS30795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDNIGHLDAKRQRNEAYLGDISRRVGEHESGEPVSCQEGENAREDQRHGQNRIVEPKDKPMTSTIFRGGGIARRQPMVAPMTTCATARAAVGNSNCVNPNA
SIO_010081: SJ05684_RS30795
subclass of: SO_0000673
so part of: SJ05684_RS30795
location: 233085..233393
location: region:233085-233393:1
so has part: feature:233085-233393:1:exon

WP_228676918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233085-233393:1:exon

SJ05684_RS28405
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28405
old locus tag: SJ05684_a39540
so part of: sequence
location: complement(233377..233778)
location: region:233377-233778:-1
so has part: feature:233377-233778:-1:exon
subclass of: SO_0000010

position:233377:-1
position: 233377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233778:-1
position: 233778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233377-233778:-1:exon

SJ05684_RS28405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28405
old locus tag: SJ05684_a39540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633451.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0010468 - regulation of gene expression [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB family transcriptional regulator
translation: MFIVAASALGYIYFWRVAGFDHPTAFFSAMPGGVVDMVTLGLERGGDEKKIALVQTTRIILVALSLPFLIPSVAGGAPHGTRVAFVPLASFCVKDVVWFSAAVLLGVVAGRLLRLPARYLLGPMSASAIMHWD
SIO_010081: SJ05684_RS28405
subclass of: SO_0000673
so part of: SJ05684_RS28405
location: complement(233377..233778)
location: region:233377-233778:-1
so has part: feature:233377-233778:-1:exon

WP_244426736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233377-233778:-1:exon

SJ05684_RS30800
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30800
so part of: sequence
location: complement(233717..233953)
location: region:233717-233953:-1
so has part: feature:233717-233953:-1:exon
subclass of: SO_0000010

position:233717:-1
position: 233717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233953:-1
position: 233953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233717-233953:-1:exon

SJ05684_RS30800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30800
inference: COORDINATES: protein motif:HMM:NF016999.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0010468 - regulation of gene expression [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB family transcriptional regulator
translation: MPLAWLAGAIIATGVGALFGLPVAIPPFARLPMTAAIGAMLGTSFSPAVFEHAGWWPSGVHRGRERIGLHLFLACGGI
SIO_010081: SJ05684_RS30800
subclass of: SO_0000673
so part of: SJ05684_RS30800
location: complement(233717..233953)
location: region:233717-233953:-1
so has part: feature:233717-233953:-1:exon

WP_244426737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233717-233953:-1:exon

SJ05684_RS28415
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifT
locus tag: SJ05684_RS28415
old locus tag: SJ05684_a39550
so part of: sequence
location: complement(234682..234912)
location: region:234682-234912:-1
so has part: feature:234682-234912:-1:exon
subclass of: SO_0000010

position:234682:-1
position: 234682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234912:-1
position: 234912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234682-234912:-1:exon

SJ05684_RS28415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifT
locus tag: SJ05684_RS28415
old locus tag: SJ05684_a39550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857660.1
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative nitrogen fixation protein NifT
translation: MKVTIRRTGNGLSAYVPKKDLEEPIVQVENEGLWGGIVVLRNGWRLLLPDLPKDTQLPVTVEAKKMVDDAAQRKTS
SIO_010081: SJ05684_RS28415
subclass of: SO_0000673
so part of: SJ05684_RS28415
location: complement(234682..234912)
location: region:234682-234912:-1
so has part: feature:234682-234912:-1:exon

WP_014857660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234682-234912:-1:exon

SJ05684_RS28420
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28420
old locus tag: SJ05684_a39560
so part of: sequence
location: complement(234909..235232)
location: region:234909-235232:-1
so has part: feature:234909-235232:-1:exon
subclass of: SO_0000010

position:234909:-1
position: 234909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235232:-1
position: 235232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234909-235232:-1:exon

SJ05684_RS28420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28420
old locus tag: SJ05684_a39560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857659.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifZ
translation: MGLGREEEVEIHNPPRFMPGEKVCATRHIKNDGTYPGKEIGERLVRKGDAGFIRDVGTFLQQFYIYAVDWIDRGIVVGMRARELMSLDEVSTLATAECTDRSEGKAR
SIO_010081: SJ05684_RS28420
subclass of: SO_0000673
so part of: SJ05684_RS28420
location: complement(234909..235232)
location: region:234909-235232:-1
so has part: feature:234909-235232:-1:exon

WP_014857659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234909-235232:-1:exon

SJ05684_RS28425
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28425
old locus tag: SJ05684_a39570
so part of: sequence
location: complement(235314..235508)
location: region:235314-235508:-1
so has part: feature:235314-235508:-1:exon
subclass of: SO_0000010

position:235314:-1
position: 235314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235508:-1
position: 235508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235314-235508:-1:exon

SJ05684_RS28425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28425
old locus tag: SJ05684_a39570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MAYKIIASQCTQCGACEFECPSSAIEYKGEKYVIDPDKCTECKGAFELQQCASVCPVPKTCVPA
SIO_010081: SJ05684_RS28425
subclass of: SO_0000673
so part of: SJ05684_RS28425
location: complement(235314..235508)
location: region:235314-235508:-1
so has part: feature:235314-235508:-1:exon

WP_034859518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235314-235508:-1:exon

SJ05684_RS28430
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifB
locus tag: SJ05684_RS28430
old locus tag: SJ05684_a39580
so part of: sequence
location: complement(235542..237023)
location: region:235542-237023:-1
so has part: feature:235542-237023:-1:exon
subclass of: SO_0000010

position:235542:-1
position: 235542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237023:-1
position: 237023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235542-237023:-1:exon

SJ05684_RS28430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifB
locus tag: SJ05684_RS28430
old locus tag: SJ05684_a39580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875165.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase cofactor biosynthesis protein NifB
translation: MSAPITWLESLTNTTSSGQLLTAAKSGDCASSSCGSSSRPTDMDSATWEKVKDHPCFSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPDQALRKVIAVANEVPQLSVLGIAGPGDACYDWKKTRATFERVASEIPDIKLCISTNGLALPEHVDELAEMNISHVTITINMVDPAVGEKIYPWIFYGHRRYTGIAAAKILHEQQMLGLEMLSERGILTKINSVMIPGVNDQHLIEVNKWVKERGAFLHNVMPLISEPAHGTWFGLAGQRGPNALELKAFQDRLEGGAKLMRHCRQCRADAVGLLGADRGQEFTLDQIPLELDYDGGKRHAYREVVARIRDDHSAAKKEAIATVASVNIPGSLQVAVATKGGGRINEHFGHAKEFQVYEASQTGIKFVGHRKVEPYCHGGWGEDATLGDIIAALEGIDFVLCARIGDCPKKQLLEAGIQATDAFGYDYIEAAISALYATKHGSDRSQLTA
SIO_010081: SJ05684_RS28430
subclass of: SO_0000673
so part of: SJ05684_RS28430
location: complement(235542..237023)
location: region:235542-237023:-1
so has part: feature:235542-237023:-1:exon

WP_034859513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235542-237023:-1:exon

SJ05684_RS28435
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifA
locus tag: SJ05684_RS28435
old locus tag: SJ05684_a39590
so part of: sequence
location: complement(237248..238918)
location: region:237248-238918:-1
so has part: feature:237248-238918:-1:exon
subclass of: SO_0000010

position:237248:-1
position: 237248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238918:-1
position: 238918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237248-238918:-1:exon

SJ05684_RS28435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifA
locus tag: SJ05684_RS28435
old locus tag: SJ05684_a39590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633448.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nif-specific transcriptional activator NifA
translation: MTELSPKTMHKRDLGCSGLYRISKVLITSASLEIKLANVINTLPALLPMRRGAIVVVGAEGEPETTATFGVEPPSSGARHIAAKAAIDRIVAKGAPLVVPDTCRSELFQDELQSIVSGTGLVTFIGVPMKADQETLGTLWIDRAKDGAATRTQFEEEVRFLSMVANLAARAVRLDGHESRDSRPIGEEGDRKISAGDKELPEPTRQRPTRIDWIVGESPALRQVVESVKVVAQTNSAVLLRGESGTGKEFFAKAIHELSPRRKKPFVKLNCAALSAGVLESELFGHEKGAFTGAISQRAGRFELADGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLKVDVRLICATNKDLETAVAEGEFRADLYYRINVVPLFLPPLRERNGDIPRLAKVFLDRFNRENNRNLEFTPAALEILSRCKFPGNVRELENCVRRTATLARSGTIVPSDFSCQNAQCFSSMLGKTADRPLGTHSLNGLTMSRRLPVESPVGLGYPNSPGDLTVAPNLTDRELLISAMEKAGWVQAKAARILGLTPRQVGYALRRHGIQVKKI
SIO_010081: SJ05684_RS28435
subclass of: SO_0000673
so part of: SJ05684_RS28435
location: complement(237248..238918)
location: region:237248-238918:-1
so has part: feature:237248-238918:-1:exon

WP_153458923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237248-238918:-1:exon

SJ05684_RS28440
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28440
so part of: sequence
location: complement(239085..239378)
location: region:239085-239378:-1
so has part: feature:239085-239378:-1:exon
subclass of: SO_0000010

position:239085:-1
position: 239085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239378:-1
position: 239378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239085-239378:-1:exon

SJ05684_RS28440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MTASVVRIEDKLYQNRYLVDAGRPHIKVRQHQSPSPNLLALTVVCPAKCYEVNEDGQVEVTADGCMECGTCRVLCEESGDIDWSYPRGGFGVLFKFG
SIO_010081: SJ05684_RS28440
subclass of: SO_0000673
so part of: SJ05684_RS28440
location: complement(239085..239378)
location: region:239085-239378:-1
so has part: feature:239085-239378:-1:exon

WP_014857655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239085-239378:-1:exon

SJ05684_RS28445
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28445
old locus tag: SJ05684_a39600
so part of: sequence
location: complement(239393..240700)
location: region:239393-240700:-1
so has part: feature:239393-240700:-1:exon
subclass of: SO_0000010

position:239393:-1
position: 239393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240700:-1
position: 240700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239393-240700:-1:exon

SJ05684_RS28445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28445
old locus tag: SJ05684_a39600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532765.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MTEERFDAIVVGAGMSGNAAAYTMASRGLKVLQLERGEYPGSKNVQGAILYANMLETIIPDFRDDAPLERHLVEQRFWVTDDTSHTGMHYRSDDFNEPAPNRYTIIRAQFDKWFSRKVRAAGAIVLCETTVTELALDAAGKVIGVHTDRAGSVIHADVVVLAEGVNGLLGTRARFRKVPKPEAVALAVKEMHFLPEEVINERFGLTGDQGCVIEAAGTISRGMAGLGFLYTNKESISLGIGCLVSHFAATLESPYALLDAFKNHPSIRPLLAGSEIKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAGEAIAAIKSRKHPMTSDNLSLYKAMLDKSFVLKDLRKYKDMPALLHTNSRNFFTTYPQLMSQAAQNFVRVDGTPKIEKERATTAALIKARSRWGLVSDAVRLALAWR
SIO_010081: SJ05684_RS28445
subclass of: SO_0000673
so part of: SJ05684_RS28445
location: complement(239393..240700)
location: region:239393-240700:-1
so has part: feature:239393-240700:-1:exon

WP_014857654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239393-240700:-1:exon

SJ05684_RS28450
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28450
old locus tag: SJ05684_a39610
so part of: sequence
location: complement(240711..241820)
location: region:240711-241820:-1
so has part: feature:240711-241820:-1:exon
subclass of: SO_0000010

position:240711:-1
position: 240711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241820:-1
position: 241820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240711-241820:-1:exon

SJ05684_RS28450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28450
old locus tag: SJ05684_a39610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558441.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit alpha/FixB family protein
translation: MGTRKSKAPPPAQARASMKKDLPEQFRDYRHVWVFMELERGHVHPVSFELLGEGRRLADQLGVQLAGIILGPPGDSTLHAAAEAFAYGADLVYLVEEPLLTDYRNEPFANALTDLVITHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTGLDVDEDGSLAATRPTFGGSLLCTIYTLNCRPQMATVRPRVMRMPQRSNKPIGRVIRHDWRMLEEDIVTKVVGFLSDDRSGNANLAYADVVVAGGLGLSNAENLLLIKDLALTIGGDYGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGISGAVQHRVGVEGADLIVAINTDPHAPIFDFAHVGVVTDAVSFLPALTEAFTRRLAPANRLRLVN
SIO_010081: SJ05684_RS28450
subclass of: SO_0000673
so part of: SJ05684_RS28450
location: complement(240711..241820)
location: region:240711-241820:-1
so has part: feature:240711-241820:-1:exon

WP_014857653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240711-241820:-1:exon

SJ05684_RS28455
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28455
old locus tag: SJ05684_a39620
so part of: sequence
location: complement(241830..242687)
location: region:241830-242687:-1
so has part: feature:241830-242687:-1:exon
subclass of: SO_0000010

position:241830:-1
position: 241830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242687:-1
position: 242687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241830-242687:-1:exon

SJ05684_RS28455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28455
old locus tag: SJ05684_a39620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875160.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit beta/FixA family protein
translation: MHIVVCIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEQALQVRDHHGGEVTVLTMGPPMAEESLRKALTYGADRAILLTDRHFAGSDTLATSFALSQAIAKIGNSFGSPDIVFTGKQTIDGDTAQVGPGIAKRLDLVQLTYVAKVTSIDLRTRAITVERRSEGGTHVLKSELPCLITMLEGSNAIRRGSLDDALRAARSEIVKWNAVEAGIEDITKCGLRGSPTVVKRVFAPTPREQKAVQIDTVEKAVQDVANELVTSIFAHQPALEHELSSTRSVSR
SIO_010081: SJ05684_RS28455
subclass of: SO_0000673
so part of: SJ05684_RS28455
location: complement(241830..242687)
location: region:241830-242687:-1
so has part: feature:241830-242687:-1:exon

WP_034859514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241830-242687:-1:exon

SJ05684_RS28460
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28460
so part of: sequence
location: complement(243136..243456)
location: region:243136-243456:-1
so has part: feature:243136-243456:-1:exon
subclass of: SO_0000010

position:243136:-1
position: 243136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243456:-1
position: 243456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243136-243456:-1:exon

SJ05684_RS28460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDRESRDGDAVIEAGGVKVYVDSASQPHVSGMTVDFTTGVDSPGFIFENPNARENCACGKSFG
SIO_010081: SJ05684_RS28460
subclass of: SO_0000673
so part of: SJ05684_RS28460
location: complement(243136..243456)
location: region:243136-243456:-1
so has part: feature:243136-243456:-1:exon

WP_014857651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243136-243456:-1:exon

SJ05684_RS28465
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28465
so part of: sequence
location: complement(244130..244696)
location: region:244130-244696:-1
so has part: feature:244130-244696:-1:exon
subclass of: SO_0000010

position:244130:-1
position: 244130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244696:-1
position: 244696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244130-244696:-1:exon

SJ05684_RS28465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MPVKKRIPFVAFRTRVRDETIGGPNPYRWEVRTTEDYFSGKRVVLFSLPGAFTPTCSTQQLPDFERLYDEFRKVGIEAVYCLSVNDAFVMNAWGKALGLEKVRLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYAAVVNDSVVEQWFEEEGFSDNCESDPYSASSPQNILETLRTFDTARLGRVPIKF
SIO_010081: SJ05684_RS28465
subclass of: SO_0000673
so part of: SJ05684_RS28465
location: complement(244130..244696)
location: region:244130-244696:-1
so has part: feature:244130-244696:-1:exon

WP_014857650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244130-244696:-1:exon

SJ05684_RS28470
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28470
old locus tag: SJ05684_a39640
so part of: sequence
location: 245275..245994
location: region:245275-245994:1
so has part: feature:245275-245994:1:exon
subclass of: SO_0000010

position:245275:1
position: 245275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245994:1
position: 245994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245275-245994:1:exon

SJ05684_RS28470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28470
old locus tag: SJ05684_a39640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857649.1
GO function: GO:0030151 - molybdenum ion binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifQ
translation: MSNLAEVRALSKGRVTLGIRMTDRPGWRQLSELLDLEPWPPTDLEMDFDQYVLACVLSRALEEIDAGEATATEATGLSQVELRDILNRSFPAPTIHVFRLEEVRDSEPGPEEELLRGLLLAHARAGDSASVLFAKIIARRALRHDHLWRELGLFDRVELSRLLASHFPTLAAGNTQNMRWKKYFYRKLCEAEGYSLCTAPSCPQCKELESCFGPEEGESASPVGKVGGEAELKRRLGRL
SIO_010081: SJ05684_RS28470
subclass of: SO_0000673
so part of: SJ05684_RS28470
location: 245275..245994
location: region:245275-245994:1
so has part: feature:245275-245994:1:exon

WP_014857649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245275-245994:1:exon

SJ05684_RS28475
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28475
old locus tag: SJ05684_a39650
so part of: sequence
location: 246046..247539
location: region:246046-247539:1
so has part: feature:246046-247539:1:exon
subclass of: SO_0000010

position:246046:1
position: 246046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247539:1
position: 247539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246046-247539:1:exon

SJ05684_RS28475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28475
old locus tag: SJ05684_a39650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857648.1
GO function: GO:0015293 - symporter activity [Evidence IEA]
GO process: GO:0006835 - dicarboxylic acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MHQVEEIILIVENVAVVRGKTPPYRHLYVQVLAAIAVGILLGYFYPDVGSKMKPLGDAFIMLVKMIIAPVIFLTVATGIAGMTDLAKVGRVAGKAMIYFLTFSTLALILGLIVANIVQPGAGMHIDPASLDMKVITSYAEKAHEQSVTSFLMNIIPTTLVGAFAEGNILQVLFTSVLFGISLAMVGKKAEAVVDFLHALTLPIFRLVAILMKAAPIGAFGAMAFTIGKYGVASIANLAMLIGTFYLTSFLFVFMVLGAVARYNGFSIVALIRYIKEELLLVLGTSSSEAALPGLMSKMEKAGCKRSVVGLVIPTGYSFNLDGTNIYMTLAALFIAQATDTPLSYGDQILLLLIAMLSSKGAAGITGAGFITLAATLSAVPSVPVAGMALILGIDRFMSECRALTNIIGNAVATIVVAKWEGELAPAQLATTLAGKAPVETMSGLSSQRSDTVELGQKVLFVATNSADRALAGRPGGRDSRRIAPDHSAQVFGGPLSL
SIO_010081: SJ05684_RS28475
subclass of: SO_0000673
so part of: SJ05684_RS28475
location: 246046..247539
location: region:246046-247539:1
so has part: feature:246046-247539:1:exon

WP_034859520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246046-247539:1:exon

SJ05684_RS28480
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28480
old locus tag: SJ05684_a39660
so part of: sequence
location: 247560..248780
location: region:247560-248780:1
so has part: feature:247560-248780:1:exon
subclass of: SO_0000010

position:247560:1
position: 247560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248780:1
position: 248780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247560-248780:1:exon

SJ05684_RS28480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28480
old locus tag: SJ05684_a39660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857647.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MKTNPIPDHVPPALVRDFSLFTSPGMAPTPNGDPHAAVACVHDNGPPIFYSPSNTRDGRGTWVITRARDQRRVLEDTETFSSHRSIFASALGENWPVIPLELDPPAHGVFRALLNPLFSSRRVLALEPTIHARAGALIDCIAKEKTSCDVMKDFALPFTVSVFLSFLGLSQRRSEVLVGWVSDLLHGNAEKRTAAARSVVAFIDEMAAMRRKSPAVDFMTFALQAKIEGRSLTEEEVRGIGVLFLVAGLDTVAAAIGFDMAYLARNPKHQELLRNEPDRLGLAAEELLRAYSTVQIIRVATKDTEFEGVPIREGDYVSCPAMIANRDPSEFKCPNTIDLARQDNQHTAFGYGPHLCHGAHLARREIVIGLREWLARIPAFRIKEGTAPITHGGHVFGISNIILTWA
SIO_010081: SJ05684_RS28480
subclass of: SO_0000673
so part of: SJ05684_RS28480
location: 247560..248780
location: region:247560-248780:1
so has part: feature:247560-248780:1:exon

WP_014857647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247560-248780:1:exon

SJ05684_RS28485
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28485
old locus tag: SJ05684_a39670
so part of: sequence
location: 248859..249431
location: region:248859-249431:1
so has part: feature:248859-249431:1:exon
subclass of: SO_0000010

position:248859:1
position: 248859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249431:1
position: 249431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248859-249431:1:exon

SJ05684_RS28485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28485
old locus tag: SJ05684_a39670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MNEESITNLFDREAIRDCLHRYCRGIDRADEAALRSCYWPDARDNHGSYSGSAAGFIQHALNVFKTKPRNIHQLANIIIEFLGATEAAVESYFTALQRGPDATGEIKQVLLCGRYCDLFQKREGEWRIVERTVVYDWVEKQRPPKSSEAERFGPRQPIGAPHPNDPVYELSKRRVAAKNHPKDLIGSGEE
SIO_010081: SJ05684_RS28485
subclass of: SO_0000673
so part of: SJ05684_RS28485
location: 248859..249431
location: region:248859-249431:1
so has part: feature:248859-249431:1:exon

WP_034859521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248859-249431:1:exon

SJ05684_RS28490
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28490
old locus tag: SJ05684_a39680
so part of: sequence
location: 249494..251140
location: region:249494-251140:1
so has part: feature:249494-251140:1:exon
subclass of: SO_0000010

position:249494:1
position: 249494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251140:1
position: 251140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249494-251140:1:exon

SJ05684_RS28490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28490
old locus tag: SJ05684_a39680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDDRQVQPGRVIVVTGAAGGIGRALVDIFAANGDVVVAVDLPDSGVIELGQNLGEPHLGLEVDVSREDDVVALRALLEKRFSRIEVLVNNAGIGPTMAATADTALEDFQGALAINLVGAYSMACEAAKLMKPGAAIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMVAELERAGKLDVSAIRRRVPLGRIARPDEIARAVRFLASAQASYITGSTLVVDGGWMSVNQPGGAHQAQDRTPGAEFMRPVEDTDARTVIVMGGATGVGAAIARRFAENGDTVVIADGDGEEAVKLAGLLGDKHLSRRVDRTVETEVVSLFEELRERFGHLDVFVNGMNEILVPNIEESPEVLKRILDVNLTGAFTCVREAAISMRSGSVILNLGSSLSLSPLAPSHAYGAYNAGIDMLTRCMAAELGPLGIRTATVAPGYIRTCAANRLAAVAGMDSASLRQRIPLGRVGDAEEVAEAAYFLASFDASYINGSILHVDGGLISSREAGWGSEVDGAISTEMRPQRRPAARWRLLSP
SIO_010081: SJ05684_RS28490
subclass of: SO_0000673
so part of: SJ05684_RS28490
location: 249494..251140
location: region:249494-251140:1
so has part: feature:249494-251140:1:exon

WP_034859517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249494-251140:1:exon

SJ05684_RS28495
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28495
old locus tag: SJ05684_a39690
so part of: sequence
location: 251278..252333
location: region:251278-252333:1
so has part: feature:251278-252333:1:exon
subclass of: SO_0000010

position:251278:1
position: 251278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252333:1
position: 252333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251278-252333:1:exon

SJ05684_RS28495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28495
old locus tag: SJ05684_a39690
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857644.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
translation: MEFATFILAAQRGYHQSSASVVRNSIEQAIFSEQAGFSTAWFAEHHFNNYSLVPSPLLMVAHCAGLTSTIRLGTAVCVLPLYQPQRLLAEIGFVDVVANGRLELGVGSGYQQFEFDRFGVNIDEAPAIFSECLDILLKGLKQRIFTHSGRYMQIPPTAISVRTLQKPTPPIWIASASSKTMARAYREGHNLFVTALHDGLETLGLLRGIIKTAAASEGKEVRDSKVSLLRCCYASDDGAEINSYIDNARFQRRLSEALRQRRQQSKDGYMLEEMPTHQDLSFDTMRKNLPIGSINRVIDRLLEEIDVLKPDQIAIQTQLGDFDQNTMLRQIELWGDKIIPAVQKSLGQSQA
SIO_010081: SJ05684_RS28495
subclass of: SO_0000673
so part of: SJ05684_RS28495
location: 251278..252333
location: region:251278-252333:1
so has part: feature:251278-252333:1:exon

WP_014857644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251278-252333:1:exon

SJ05684_RS28500
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifH
locus tag: SJ05684_RS28500
old locus tag: SJ05684_a39710
so part of: sequence
location: 252935..253825
location: region:252935-253825:1
so has part: feature:252935-253825:1:exon
subclass of: SO_0000010

position:252935:1
position: 252935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253825:1
position: 253825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252935-253825:1:exon

SJ05684_RS28500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifH
locus tag: SJ05684_RS28500
old locus tag: SJ05684_a39710
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MAGLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNAKAQDTVLHLAAKEGSVEDLEVEDVLKVGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLAEALAAKLNSRLIHFVPRDNIVQHAELRKMTVIQYAPESQQAAEYRALADKIHANSGQGTVPTPITMEELEDMLLDFGVMKTDEQMLAELQAKEAAAAAQ
SIO_010081: SJ05684_RS28500
subclass of: SO_0000673
so part of: SJ05684_RS28500
location: 252935..253825
location: region:252935-253825:1
so has part: feature:252935-253825:1:exon

WP_010875130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252935-253825:1:exon

SJ05684_RS28505
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifD
locus tag: SJ05684_RS28505
old locus tag: SJ05684_a39720
so part of: sequence
location: 253921..255435
location: region:253921-255435:1
so has part: feature:253921-255435:1:exon
subclass of: SO_0000010

position:253921:1
position: 253921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255435:1
position: 255435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253921-255435:1:exon

SJ05684_RS28505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifD
locus tag: SJ05684_RS28505
old locus tag: SJ05684_a39720
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532774.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein alpha chain
translation: MSLDYENDSALHQELITQVLSQYPHKAAKRRQKHLSVASDREAVGEEGETLSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGQYSWSQRRNYYVGTTGVDTFVTMQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGITIQSECPIGLIGDDIEAVSRKKAVEHETTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKADDKTDVEFETGPYDVNVIGDYNIGGDAWASRILLEEIGLRVVGNWSGDATLAEVERAPRAKLNLIHCYRSMNYICRHMEERYAIPWMEYNFFGPSQIEASLRKIARHFGPTIEERAERVIAKYRPLVDAVIDKYWPRLQGKRVMLYVGGLRPRHVITAYEDLGMQIVGTGYEFAHNDDYQRTGHYVKTGTLIYDDATSYELDTFIERIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWDLYDAPWKKMTVPTAAVAAE
SIO_010081: SJ05684_RS28505
subclass of: SO_0000673
so part of: SJ05684_RS28505
location: 253921..255435
location: region:253921-255435:1
so has part: feature:253921-255435:1:exon

WP_014857528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253921-255435:1:exon

SJ05684_RS28510
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifK
locus tag: SJ05684_RS28510
pseudo: true
so part of: sequence
location: 255531..257071
location: region:255531-257071:1
so has part: feature:255531-257071:1:exon
subclass of: SO_0000010

position:255531:1
position: 255531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257071:1
position: 257071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255531-257071:1:exon

SJ05684_RS28510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifK
locus tag: SJ05684_RS28510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331758.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein subunit beta
SIO_010081: SJ05684_RS28510
subclass of: SO_0000673
so part of: SJ05684_RS28510
location: 255531..257071
location: region:255531-257071:1
so has part: feature:255531-257071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255531-257071:1:exon

SJ05684_RS28515
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifE
locus tag: SJ05684_RS28515
old locus tag: SJ05684_a39750
so part of: sequence
location: 257126..258616
location: region:257126-258616:1
so has part: feature:257126-258616:1:exon
subclass of: SO_0000010

position:257126:1
position: 257126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258616:1
position: 258616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257126-258616:1:exon

SJ05684_RS28515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifE
locus tag: SJ05684_RS28515
old locus tag: SJ05684_a39750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857642.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
translation: MSSLNVKIQDVFDEPACERNRSKDSNARSKGCSKPLTPGAAAGGCAFDGAKIVLQPITDVAHLVHAPLACEGNSWDNRGTASSGPTLWRTSFTTDLTEQDIVMGNSERKLFKAIRQIKEAYQPPAIFVYATCVTALIGDDIEAVCKRAEETCGLPVVPINSPGFVGPKNLGNKLAGEALLDHVIGTVEPDDAGPCDINILGEFNLSGEFWLVRPLLERLGIRVRACIPGDARYLDIASAHRARAAMLVCSTALINLARKMEERWDIPFFEGSFYGITATSEALRQIADLLVKKGADQEILDRTDALIAEEEAIAWKKLEEYRPRLKGKRVLINTGGVKSWSLVHALMEIGMEIVGTSVKKSTVEDKERIRQVLKDDLQMFESMSPRELYAMLSEHKADIMLSGGRTQFIALKAKMPWVDINQERHRPYAGYDGTVELVRQIDLAIHNPVWSQVREPAPWESRPATQEPLPNTRPDSDATSVGRSIRRHDAGYFVEC
SIO_010081: SJ05684_RS28515
subclass of: SO_0000673
so part of: SJ05684_RS28515
location: 257126..258616
location: region:257126-258616:1
so has part: feature:257126-258616:1:exon

WP_014857642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257126-258616:1:exon

SJ05684_RS28520
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifN
locus tag: SJ05684_RS28520
old locus tag: SJ05684_a39760
pseudo: true
so part of: sequence
location: 258626..260066
location: region:258626-260066:1
so has part: feature:258626-260066:1:exon
subclass of: SO_0000010

position:258626:1
position: 258626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260066:1
position: 260066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258626-260066:1:exon

SJ05684_RS28520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifN
locus tag: SJ05684_RS28520
old locus tag: SJ05684_a39760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913612.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
SIO_010081: SJ05684_RS28520
subclass of: SO_0000673
so part of: SJ05684_RS28520
location: 258626..260066
location: region:258626-260066:1
so has part: feature:258626-260066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258626-260066:1:exon

SJ05684_RS29910
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifX
locus tag: SJ05684_RS29910
pseudo: true
so part of: sequence
location: 260032..>260511
location: region:260032-260511:1
so has part: feature:260032-260511:1:exon
subclass of: SO_0000010

position:260032:1
position: 260032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260511:1
position: 260511
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260032-260511:1:exon

SJ05684_RS29910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifX
locus tag: SJ05684_RS29910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737533.1
GO function: GO:0051540 - metal cluster binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogen fixation protein NifX
SIO_010081: SJ05684_RS29910
subclass of: SO_0000673
so part of: SJ05684_RS29910
location: 260032..>260511
location: region:260032-260511:1
so has part: feature:260032-260511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260032-260511:1:exon

SJ05684_RS29915
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29915
so part of: sequence
location: 260518..261006
location: region:260518-261006:1
so has part: feature:260518-261006:1:exon
subclass of: SO_0000010

position:260518:1
position: 260518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261006:1
position: 261006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260518-261006:1:exon

SJ05684_RS29915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MKKTSINTGTPDVKVDEAALVTPFVKCLARLVRAQDTYGSQDRASDAELLANFVITEEQRREIPIIGDPGPDVMLRFNIFYTAVALSIEARTGLVASPITMISHEGFGRVLLTTGRLVVFSKTVRDVHRFGFATLRKLAEAGAKLVDDATAAIETYPEVARA
SIO_010081: SJ05684_RS29915
subclass of: SO_0000673
so part of: SJ05684_RS29915
location: 260518..261006
location: region:260518-261006:1
so has part: feature:260518-261006:1:exon

WP_034859528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260518-261006:1:exon

SJ05684_RS28530
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28530
old locus tag: SJ05684_a39780
so part of: sequence
location: 261440..261859
location: region:261440-261859:1
so has part: feature:261440-261859:1:exon
subclass of: SO_0000010

position:261440:1
position: 261440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261859:1
position: 261859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261440-261859:1:exon

SJ05684_RS28530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28530
old locus tag: SJ05684_a39780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGLGQVAFGCEGGIDTCTAAQNALAVFFDLGPKVGSVGGNLKSNSGRFILESMPRDSAPAWYAIIRDFDADVPWRLKAFHTTAGLALEPSVRSVYEGFGVLLTTGQSRIDGTPSVSLPIGSSPETEAITAIHAPKWRG
SIO_010081: SJ05684_RS28530
subclass of: SO_0000673
so part of: SJ05684_RS28530
location: 261440..261859
location: region:261440-261859:1
so has part: feature:261440-261859:1:exon

WP_034859525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261440-261859:1:exon

SJ05684_RS28535
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: fdxB
locus tag: SJ05684_RS28535
old locus tag: SJ05684_a39790
so part of: sequence
location: 262167..262484
location: region:262167-262484:1
so has part: feature:262167-262484:1:exon
subclass of: SO_0000010

position:262167:1
position: 262167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262484:1
position: 262484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262167-262484:1:exon

SJ05684_RS28535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: fdxB
locus tag: SJ05684_RS28535
old locus tag: SJ05684_a39790
function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin III, nif-specific
translation: MTSHFFTRDGSTWMPQYLTAIDAMTCIGCGRCFKVCSREVMHLHGIDESGEILGACDGEDDDFDGELSRTIMVVDHAGRCIGCGACARVCPKNCQTHVAADKIVA
SIO_010081: SJ05684_RS28535
subclass of: SO_0000673
so part of: SJ05684_RS28535
location: 262167..262484
location: region:262167-262484:1
so has part: feature:262167-262484:1:exon

WP_015633444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262167-262484:1:exon

SJ05684_RS28545
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28545
so part of: sequence
location: complement(262836..263333)
location: region:262836-263333:-1
so has part: feature:262836-263333:-1:exon
subclass of: SO_0000010

position:262836:-1
position: 262836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263333:-1
position: 263333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262836-263333:-1:exon

SJ05684_RS28545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28545
inference: COORDINATES: protein motif:HMM:NF013936.2
GO function: GO:0043169 - cation binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MIARIKTFAPPTNRSLAPATADRLALLAGSHEDQLALCDRLEAIANGLPYGVDRSICAHAGKMLGPHLRNLHEREEAAVFAWTEEKLGDDPSVLSTLGLLKYEHCEDECFAEELAEVLGRLATADATVNPEAAGYMLRGFFTNLRRHVRFEQQCFRNLTADRSGC
SIO_010081: SJ05684_RS28545
subclass of: SO_0000673
so part of: SJ05684_RS28545
location: complement(262836..263333)
location: region:262836-263333:-1
so has part: feature:262836-263333:-1:exon

WP_015633443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262836-263333:-1:exon

SJ05684_RS28560
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28560
old locus tag: SJ05684_a39820
so part of: sequence
location: 264144..265682
location: region:264144-265682:1
so has part: feature:264144-265682:1:exon
subclass of: SO_0000010

position:264144:1
position: 264144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265682:1
position: 265682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264144-265682:1:exon

SJ05684_RS28560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28560
old locus tag: SJ05684_a39820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875145.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MSEPFFMPGSGPAPGHPTAEPWRRRKRWYSPSDGRAGTARSHLPQRSTSHDGVCSRICAFVLCMVALQFLMTSAMAADESPLREAEVANFMLGNGMEVVVIPDHRAPIVTQMIWYKVGNADEPPGKSGIAHFLEHLMFKGTKKHPSGEFSAKIAEIGGEENAFTGSDYTAYHQTVTPESLKTIMEFEADRMRHLVLTDAVIVPERDVILEERRWRVENSPEQLLEEEMQATLYQNHPYRIPTIGWMHEMEQLNREDALKFYDRYYAPNNAILVVAGDVDAGRVRRLADETFGTLPRGPDLPARVRPQEPEQNTKRIVALTDPRVTVPSFQKSWVTTSYGTAEQGEAEALDILSEILGGGTRSRIYQELVVKQAIASSGGAYFNGRSLDPSSFTVFGSPRGEAKIEEVEDAIDAEIRKIIEFGITDVELEKAKNRFVRSIIFARDSQSGMAGIYGAALATGDTAHDVEAWPLRIRAVKAAEVQAAARKYLSPDRSVAGYLLPRESATSGDKSR
SIO_010081: SJ05684_RS28560
subclass of: SO_0000673
so part of: SJ05684_RS28560
location: 264144..265682
location: region:264144-265682:1
so has part: feature:264144-265682:1:exon

WP_014857633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264144-265682:1:exon

SJ05684_RS28565
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28565
old locus tag: SJ05684_a39830
so part of: sequence
location: 265679..267022
location: region:265679-267022:1
so has part: feature:265679-267022:1:exon
subclass of: SO_0000010

position:265679:1
position: 265679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267022:1
position: 267022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265679-267022:1:exon

SJ05684_RS28565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28565
old locus tag: SJ05684_a39830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875144.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MISFSRLRIGAKPSLVVACILLGLAACPALAGMAIEEVETSSGIKAWLVQDYSLPIVTTRFAFRGGRTQDPSGKEGIVNLITELLDEGAGNLDSDAFQERLDDAGAEMLFEAGPDAVYGYMRVLAARKDEAFQLLRLAIEQPRFDQQPVDRLRAQIVSSILARAKDPETAAQFAWMRAIYGDHPYSRREEGTVQTLAAVTTSDLKAVHERIFARGNLTIAVVGAIDPGTLKRDLDRIFGGLPAGPSLTPVVDAVPKLGRAIRVAYDLPQTQLSLAYPGIPRKDPQFFAANLMNQILGGGAFTSRLWNEVREKRGLAYGIYSTLENIDHASALVIGTGTRPDRAAETLSLIRAEVRRMSEEGVSEDELTAAKKKLIGGYAIENLNSSSAVAQTLVQIQLEDRGIDYVERRKQLIQAVTVEDVRAVAKRLLSADPTVMTVGPSLKGTNR
SIO_010081: SJ05684_RS28565
subclass of: SO_0000673
so part of: SJ05684_RS28565
location: 265679..267022
location: region:265679-267022:1
so has part: feature:265679-267022:1:exon

WP_014857632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265679-267022:1:exon

SJ05684_RS28570
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28570
old locus tag: SJ05684_a39840
so part of: sequence
location: 267505..267936
location: region:267505-267936:1
so has part: feature:267505-267936:1:exon
subclass of: SO_0000010

position:267505:1
position: 267505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267936:1
position: 267936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267505-267936:1:exon

SJ05684_RS28570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28570
old locus tag: SJ05684_a39840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLSTNSEQTRRKPNAVDAHVGQRIRQRREWQNMSQTTLGEAIGVTFQQVQKYEKGVNRVGAGRLQQISKALKVEPSYFFEDTLNKIRSEERSASNQINIPPEVVEFVVSKEGIELIRAFSRVGDYRLRRRIVMLVKSLGAHER
SIO_010081: SJ05684_RS28570
subclass of: SO_0000673
so part of: SJ05684_RS28570
location: 267505..267936
location: region:267505-267936:1
so has part: feature:267505-267936:1:exon

WP_014857631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267505-267936:1:exon

SJ05684_RS29920
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29920
so part of: sequence
location: complement(268049..268375)
location: region:268049-268375:-1
so has part: feature:268049-268375:-1:exon
subclass of: SO_0000010

position:268049:-1
position: 268049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268375:-1
position: 268375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268049-268375:-1:exon

SJ05684_RS29920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEIIDRFAQKPRSMAFQCGESRSDFAYNATRQLQISAATIDQRTAVALANVDKTAEHIRMGVSFYDILKLAVDGRRSIPKDGRGAQPAKIRRIDRRVSPWYFRTFKG
SIO_010081: SJ05684_RS29920
subclass of: SO_0000673
so part of: SJ05684_RS29920
location: complement(268049..268375)
location: region:268049-268375:-1
so has part: feature:268049-268375:-1:exon

WP_153458739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268049-268375:-1:exon

SJ05684_RS28575
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28575
old locus tag: SJ05684_a39850
so part of: sequence
location: 268672..269805
location: region:268672-269805:1
so has part: feature:268672-269805:1:exon
subclass of: SO_0000010

position:268672:1
position: 268672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269805:1
position: 269805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268672-269805:1:exon

SJ05684_RS28575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28575
old locus tag: SJ05684_a39850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875142.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRRLLTPWRGVAAGFLLNGILLGTWASRVPAVMGHFHVAKASFGVLLLLLGLGALISFPITGRLSDSLGAVRVARMIAIPFLVSIAALGLAPTIPLLAIALFLFGMCHGSMDVAVNSWASEVEKHMGRPVMSSFHAMWSVGAVLGAAGGYIATVFQTPVYVHFLVTAVTIGGLLGPFLLLDWQSTIRTHESGAVGLVLPNSGLFLVGLIALASGLGEGTALDWSAVYLHDVVGTEESDAALGYMGFSAAMVMMRLKADSLVTRWGSVTVARISGFSAVFGILLIVLGETLPLVVAGFVLMGVGYAAVLPLAFSRAAADLVVPAGKAIASVAIFAYGAMTLGPFAIGLLAEATTMRLCFFIVGLFAALVAVLAPVLKQ
SIO_010081: SJ05684_RS28575
subclass of: SO_0000673
so part of: SJ05684_RS28575
location: 268672..269805
location: region:268672-269805:1
so has part: feature:268672-269805:1:exon

WP_034859526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268672-269805:1:exon

SJ05684_RS28585
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: hisC
locus tag: SJ05684_RS28585
old locus tag: SJ05684_a39860
so part of: sequence
location: 270236..271435
location: region:270236-271435:1
so has part: feature:270236-271435:1:exon
subclass of: SO_0000010

position:270236:1
position: 270236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271435:1
position: 271435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270236-271435:1:exon

SJ05684_RS28585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: hisC
locus tag: SJ05684_RS28585
old locus tag: SJ05684_a39860
EC number: 2.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857627.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MSDAKLQRVLSSLTEVYRQLNSLPSSQASDAGYVKLDTNENPFALPKAVMQSAVAALERQYLYPEDDNISLREAAAASYDLSADQVIAGNGSSELLSLIYKAFLGPGDSVAMLSPGFAYNRKLAQLQGARLLEIKWGESSLLPIHELLFGPAKQAKFILLANPNNPTGTFVPIADIESLVALSDQLVVLDEAYVDFAPDSALRLVSRYSNLLLLRTFSKSYAAAGIRVGFGFGHPEVIGRLRNIQNMFNMNVIGHAVGVSILAHRATYNENHRHIRHERERVRGALSRLGFSVTPSHANFLLARVPAGRDGVWWHACLKRKKILVAVLPDEGLEDCIRVSIGTKPQMDAFLAAVEDISGAQTISMMGRIAASGSALLHVGKDSGDRKESDDRKTGLPQR
SIO_010081: SJ05684_RS28585
subclass of: SO_0000673
so part of: SJ05684_RS28585
location: 270236..271435
location: region:270236-271435:1
so has part: feature:270236-271435:1:exon

WP_014857627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270236-271435:1:exon

SJ05684_RS28590
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28590
so part of: sequence
location: 271734..272762
location: region:271734-272762:1
so has part: feature:271734-272762:1:exon
subclass of: SO_0000010

position:271734:1
position: 271734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272762:1
position: 272762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271734-272762:1:exon

SJ05684_RS28590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28590
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875140.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
translation: MRKILPSKLAFGIFDHLDEDGNAMARQYADRLTLTEACDRLGFYAYHLAEHHFSPHGRSPSPNLFLSSVAQRTRQLRLGPLVMLLSLSHPLRAFEEICMLDHLSGGRAELGIGRGSLPIELGYFGIDPDAVAGRYFEASEILMEAMRGGNLSYRGDHFELNNVPLILRPHQRPHPPTWIATNRPESARWAATNGANVACVGPASLVRRITDAFRSEEGLSSGANCNASFLGLLRMIVVGQSAEHAYSLAAPAFERWLNNFKFLYDLHAIPVPPNLPLTFDAAIESELCVVGTAPVVRRALLDQVDEAGANYLLCQVAFGDLPLDASLYTAMTIQSELMDRVG
SIO_010081: SJ05684_RS28590
subclass of: SO_0000673
so part of: SJ05684_RS28590
location: 271734..272762
location: region:271734-272762:1
so has part: feature:271734-272762:1:exon

WP_014857626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271734-272762:1:exon

SJ05684_RS28595
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28595
so part of: sequence
location: 272929..273345
location: region:272929-273345:1
so has part: feature:272929-273345:1:exon
subclass of: SO_0000010

position:272929:1
position: 272929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273345:1
position: 273345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272929-273345:1:exon

SJ05684_RS28595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEIDAILITDVNGIGTTADDQLAFVSLIADQGETTTVAFGPEMGSRIAASFMAACGQLQHQIATRTGKEERKFKPFAAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSLRELENQLTLLLEQLRLRSRPN
SIO_010081: SJ05684_RS28595
subclass of: SO_0000673
so part of: SJ05684_RS28595
location: 272929..273345
location: region:272929-273345:1
so has part: feature:272929-273345:1:exon

WP_223843489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272929-273345:1:exon

SJ05684_RS28600
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28600
old locus tag: SJ05684_a39880
so part of: sequence
location: 273457..274536
location: region:273457-274536:1
so has part: feature:273457-274536:1:exon
subclass of: SO_0000010

position:273457:1
position: 273457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274536:1
position: 274536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273457-274536:1:exon

SJ05684_RS28600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28600
old locus tag: SJ05684_a39880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MRTGRAFTVSPTDRQRLRALISDRNAPQKHVWRAEIILLSADGVGTVEIMRQTGKSKTCVWRWQERFATEGFEGLLRDKTRPSRIAPLGPEIGEQVVALSLADPPGETTHWTADMMAAEVGVSASAVRRIWKAHGLQPHRWRAFKLSNDPQFVAKLKDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAQVPADKAIHVILDNYAAHKHPKVRAWLDRHQRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVVDLQAAINRFLTEHNQQPKPFTWTADPDKIIAAVKRGHQVLDSIH
SIO_010081: SJ05684_RS28600
subclass of: SO_0000673
so part of: SJ05684_RS28600
location: 273457..274536
location: region:273457-274536:1
so has part: feature:273457-274536:1:exon

WP_041415762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273457-274536:1:exon

SJ05684_RS28605
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28605
pseudo: true
so part of: sequence
location: 275045..>275994
location: region:275045-275994:1
so has part: feature:275045-275994:1:exon
subclass of: SO_0000010

position:275045:1
position: 275045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275994:1
position: 275994
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275045-275994:1:exon

SJ05684_RS28605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: SJ05684_RS28605
subclass of: SO_0000673
so part of: SJ05684_RS28605
location: 275045..>275994
location: region:275045-275994:1
so has part: feature:275045-275994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275045-275994:1:exon

SJ05684_RS30175
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30175
pseudo: true
so part of: sequence
location: <275996..276136
location: region:275996-276136:1
so has part: feature:275996-276136:1:exon
subclass of: SO_0000010

position:275996:1
position: 275996
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:276136:1
position: 276136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275996-276136:1:exon

SJ05684_RS30175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857744.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: SJ05684_RS30175
subclass of: SO_0000673
so part of: SJ05684_RS30175
location: <275996..276136
location: region:275996-276136:1
so has part: feature:275996-276136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275996-276136:1:exon

SJ05684_RS28615
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28615
old locus tag: SJ05684_a39920
so part of: sequence
location: 276512..276587
location: region:276512-276587:1
so has part: feature:276512-276587:1:exon
subclass of: SO_0000663

position:276512:1
position: 276512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276587:1
position: 276587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276512-276587:1:exon

SJ05684_RS28615
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 716928
locus tag: SJ05684_RS28615
old locus tag: SJ05684_a39920
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:276545..276547,aa:Ile,seq:cat)
SIO_010081: SJ05684_RS28615
subclass of: SO_0000673
so part of: SJ05684_RS28615
location: 276512..276587
location: region:276512-276587:1
so has part: feature:276512-276587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276512-276587:1:exon

SJ05684_RS28620
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28620
old locus tag: SJ05684_a39930
so part of: sequence
location: complement(276750..277007)
location: region:276750-277007:-1
so has part: feature:276750-277007:-1:exon
subclass of: SO_0000010

position:276750:-1
position: 276750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277007:-1
position: 277007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276750-277007:-1:exon

SJ05684_RS28620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28620
old locus tag: SJ05684_a39930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKTDTRQANWRRANPGKYDAHLAVQRAVNAGELEKQTCEVCGIEAVDAHHDQYDEPLKVRWLCRRHHTRLHHYGEDMFPIRDAF
SIO_010081: SJ05684_RS28620
subclass of: SO_0000673
so part of: SJ05684_RS28620
location: complement(276750..277007)
location: region:276750-277007:-1
so has part: feature:276750-277007:-1:exon

WP_014857619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276750-277007:-1:exon

SJ05684_RS28630
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28630
old locus tag: SJ05684_a39940
so part of: sequence
location: complement(277470..279038)
location: region:277470-279038:-1
so has part: feature:277470-279038:-1:exon
subclass of: SO_0000010

position:277470:-1
position: 277470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279038:-1
position: 279038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277470-279038:-1:exon

SJ05684_RS28630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28630
old locus tag: SJ05684_a39940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012755361.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MRNQHHGLFAATVDAPRGFVVDNTAVDDEVMLIAVRPASRTSLCPICGTRSERIHSRYQRRLADLPLVGKPVRLVIEARRFHCDAVLCGRRIFAERFDGDVLAPSARRTARLDHIVHHLGLALGGRPAAAFAKRLMLPVSNDTLLRVVRRRGSPRFVPPIVIGIDDWAWRRNQRYGTIICDLERRKTIALLPDREPSTAQAWLSDQPQISIVARDRGGGYATAAAKALPQATQVADRWHLMENASRAFVDAVRKSMRQIRTAIGAATINPELLTAAERIQYEGYLRREDTNAAILDLAKSGAAIKEIMRRTGYSRGLVRRVLRGQRSDVFRVRENSLELYLPWLDAQWSAGHRNGTELWRQLKSQGFRGCLRVVTEWATRRRKAEKVDDGALSRAPSARTIARLMTIGRDDLSKSETVTVAAIESGVPLLVEAREAIAAFQAMIRKKSLADLDPWLEKTRTGLVASFANGIVKDRAAVSAALTSPWSNGQTEGQITKLKLVKRQMYGRGKIDLLQARVIGAG
SIO_010081: SJ05684_RS28630
subclass of: SO_0000673
so part of: SJ05684_RS28630
location: complement(277470..279038)
location: region:277470-279038:-1
so has part: feature:277470-279038:-1:exon

WP_048655403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277470-279038:-1:exon

SJ05684_RS28640
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28640
so part of: sequence
location: 279300..279518
location: region:279300-279518:1
so has part: feature:279300-279518:1:exon
subclass of: SO_0000010

position:279300:1
position: 279300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279518:1
position: 279518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279300-279518:1:exon

SJ05684_RS28640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014421489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2188 domain-containing protein
translation: MSKKGQHVVPSADGWSVKKAGSARATSTHQTQAEAIAAATKIAQKTELYIHGRDGRIRERNSYGNDPIPPKG
SIO_010081: SJ05684_RS28640
subclass of: SO_0000673
so part of: SJ05684_RS28640
location: 279300..279518
location: region:279300-279518:1
so has part: feature:279300-279518:1:exon

WP_080577876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279300-279518:1:exon

SJ05684_RS30180
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30180
old locus tag: SJ05684_a39950
so part of: sequence
location: 279753..280250
location: region:279753-280250:1
so has part: feature:279753-280250:1:exon
subclass of: SO_0000010

position:279753:1
position: 279753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280250:1
position: 280250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279753-280250:1:exon

SJ05684_RS30180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30180
old locus tag: SJ05684_a39950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014763930.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVWGACYIGPVPTWGVLGRVMQRDAVSDRGSIMIDNRLTVLNLYELKKTPEDFEIAVGALARRVEAEGHPGVLSYRFFVNASERTARGVIDYKNPDAWIGHHDIAMSWPEMTALHAAATLAEVIFLGPLTTEIQAWIESSALTARVRNGNIFAGGFQRLSDWSNE
SIO_010081: SJ05684_RS30180
subclass of: SO_0000673
so part of: SJ05684_RS30180
location: 279753..280250
location: region:279753-280250:1
so has part: feature:279753-280250:1:exon

WP_015633433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279753-280250:1:exon

SJ05684_RS28670
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28670
so part of: sequence
location: complement(281882..282942)
location: region:281882-282942:-1
so has part: feature:281882-282942:-1:exon
subclass of: SO_0000010

position:281882:-1
position: 281882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282942:-1
position: 282942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281882-282942:-1:exon

SJ05684_RS28670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVRWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS28670
subclass of: SO_0000673
so part of: SJ05684_RS28670
location: complement(join(281882..282450,282450..282942))
location: region:281882-282942:-1
so has part: feature:282450-282942:-1:exon
so has part: feature:281882-282450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282450-282942:-1:exon

position:282450:-1
position: 282450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281882-282450:-1:exon

SJ05684_RS28675
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28675
so part of: sequence
location: 283275..283739
location: region:283275-283739:1
so has part: feature:283275-283739:1:exon
subclass of: SO_0000010

position:283275:1
position: 283275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283739:1
position: 283739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283275-283739:1:exon

SJ05684_RS28675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017277652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAALDWLFEPANLSLLSNLVTVFGFPIALVGLLFVGRQMKNDRLAVSAGAIGEMRASIMQRVDRLHQAKTNDDLAAWESEFKELANDLEMACAIYLDGQMSGRTGLLAKNLICDFLNMINADSDLREEMEKAIHAEDTFTNIRDFRAKVKRDA
SIO_010081: SJ05684_RS28675
subclass of: SO_0000673
so part of: SJ05684_RS28675
location: 283275..283739
location: region:283275-283739:1
so has part: feature:283275-283739:1:exon

WP_048655401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283275-283739:1:exon

SJ05684_RS28680
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28680
so part of: sequence
location: 283765..284235
location: region:283765-284235:1
so has part: feature:283765-284235:1:exon
subclass of: SO_0000010

position:283765:1
position: 283765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284235:1
position: 284235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283765-284235:1:exon

SJ05684_RS28680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADLEPGELLRMSFGSSAAIVLFLKRLNDDEGLFGVLPSEDFTETMTWHATSLDDACLSYGHDWVLEEEHGSETACRHHYTHESARLFLAKSGLVMAFRPPQGRGRYNTYYYSLANLEDGELGRDPAPINRWRVWESREHFDRGGTPLFEMLQKTA
SIO_010081: SJ05684_RS28680
subclass of: SO_0000673
so part of: SJ05684_RS28680
location: 283765..284235
location: region:283765-284235:1
so has part: feature:283765-284235:1:exon

WP_015633375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283765-284235:1:exon

SJ05684_RS28685
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28685
old locus tag: SJ05684_a40010
pseudo: true
so part of: sequence
location: 284588..285325
location: region:284588-285325:1
so has part: feature:284588-285325:1:exon
subclass of: SO_0000010

position:284588:1
position: 284588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285325:1
position: 285325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284588-285325:1:exon

SJ05684_RS28685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28685
old locus tag: SJ05684_a40010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007827581.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SJ05684_RS28685
subclass of: SO_0000673
so part of: SJ05684_RS28685
location: 284588..285325
location: region:284588-285325:1
so has part: feature:284588-285325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284588-285325:1:exon

SJ05684_RS28690
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28690
old locus tag: SJ05684_a40020
pseudo: true
so part of: sequence
location: complement(285312..>286059)
location: region:285312-286059:-1
so has part: feature:285312-286059:-1:exon
subclass of: SO_0000010

position:285312:-1
position: 285312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286059:-1
position: 286059
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285312-286059:-1:exon

SJ05684_RS28690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28690
old locus tag: SJ05684_a40020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017267339.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: SJ05684_RS28690
subclass of: SO_0000673
so part of: SJ05684_RS28690
location: complement(285312..>286059)
location: region:285312-286059:-1
so has part: feature:285312-286059:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285312-286059:-1:exon

SJ05684_RS28695
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28695
so part of: sequence
location: 286285..287345
location: region:286285-287345:1
so has part: feature:286285-287345:1:exon
subclass of: SO_0000010

position:286285:1
position: 286285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287345:1
position: 287345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286285-287345:1:exon

SJ05684_RS28695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGSAILLRDDFDGRALRQLARQTKDANQARRLLALAEIYDGGSRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGGRAKLNVAQRHALAKIVESGPIPAIHGVVRWRRKDLVQWIFQEFRIAMDETTVGRELKALGFAKLSARPRHYAQNELEAEAFKKNFPAALAEIRGRLPRGTDLELWWADEARIGQKNKITRRWARRGTRPSAPLDQRTMWAYIFGAVCPRKGKGAGLVLPYCDTEAMQQHLAEISQAVDEGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELNPVENVWQFLRDNWLSNRIFKDYDDIVAHCCAAWNKLVDQPWKIMSIGLREWAHRS
SIO_010081: SJ05684_RS28695
subclass of: SO_0000673
so part of: SJ05684_RS28695
location: join(286285..286777,286777..287345)
location: region:286285-287345:1
so has part: feature:286285-286777:1:exon
so has part: feature:286777-287345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286285-286777:1:exon

position:286777:1
position: 286777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286777-287345:1:exon

SJ05684_RS28700
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28700
so part of: sequence
location: 287382..287765
location: region:287382-287765:1
so has part: feature:287382-287765:1:exon
subclass of: SO_0000010

position:287382:1
position: 287382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287765:1
position: 287765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287382-287765:1:exon

SJ05684_RS28700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017266263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MELLQRMEAGETVSKLADEVGISRQRLYEWRDQLRLHGNLKSRRRGRPARSTAGVDGDLQLQSAVEQPAPQEKALTKARRRIRELEQKVGQQQLDLDFFREALRHFEEDQRRSSAPGETGSSKSSKR
SIO_010081: SJ05684_RS28700
subclass of: SO_0000673
so part of: SJ05684_RS28700
location: 287382..287765
location: region:287382-287765:1
so has part: feature:287382-287765:1:exon

WP_255876990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287382-287765:1:exon

SJ05684_RS28705
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28705
old locus tag: SJ05684_a40070
so part of: sequence
location: 287762..288631
location: region:287762-288631:1
so has part: feature:287762-288631:1:exon
subclass of: SO_0000010

position:287762:1
position: 287762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288631:1
position: 288631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287762-288631:1:exon

SJ05684_RS28705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28705
old locus tag: SJ05684_a40070
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTTGLSQGEFNIDRMCWLAGVSRASYYRHWLDSAPRRAETGLRDLIQKMALGNAHYGYRRIGALLRREGWQVNHKCILRIMREDNLLCLRARPFVPTTTNSRHGWQVVPNLARGMILNGVNQLWVADITFLHLAEEFAFLAVVLDAFSRRVVGWALDTHLRASLAIEALEMAITDRQPVAGSLVHHSDRGVQYACGAYSELLHLHGIQASMSRVGNPYDNAKAESFMKTLKQEEVQGLAYRDADDARRRIGAFIDTVYNTQRLHSALDYLTPEEYEQKHSGGRRMEKAA
SIO_010081: SJ05684_RS28705
subclass of: SO_0000673
so part of: SJ05684_RS28705
location: 287762..288631
location: region:287762-288631:1
so has part: feature:287762-288631:1:exon

WP_015633379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287762-288631:1:exon

SJ05684_RS28710
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28710
old locus tag: SJ05684_a40080
pseudo: true
so part of: sequence
location: complement(<288750..289418)
location: region:288750-289418:-1
so has part: feature:288750-289418:-1:exon
subclass of: SO_0000010

position:288750:-1
position: 288750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:289418:-1
position: 289418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288750-289418:-1:exon

SJ05684_RS28710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28710
old locus tag: SJ05684_a40080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: SJ05684_RS28710
subclass of: SO_0000673
so part of: SJ05684_RS28710
location: complement(<288750..289418)
location: region:288750-289418:-1
so has part: feature:288750-289418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288750-289418:-1:exon

SJ05684_RS28715
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28715
old locus tag: SJ05684_a40100
pseudo: true
so part of: sequence
location: complement(289712..291090)
location: region:289712-291090:-1
so has part: feature:289712-291090:-1:exon
subclass of: SO_0000010

position:289712:-1
position: 289712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291090:-1
position: 291090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289712-291090:-1:exon

SJ05684_RS28715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28715
old locus tag: SJ05684_a40100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: SJ05684_RS28715
subclass of: SO_0000673
so part of: SJ05684_RS28715
location: complement(289712..291090)
location: region:289712-291090:-1
so has part: feature:289712-291090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289712-291090:-1:exon

SJ05684_RS28720
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28720
old locus tag: SJ05684_a40110
so part of: sequence
location: complement(291269..292279)
location: region:291269-292279:-1
so has part: feature:291269-292279:-1:exon
subclass of: SO_0000010

position:291269:-1
position: 291269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292279:-1
position: 292279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291269-292279:-1:exon

SJ05684_RS28720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28720
old locus tag: SJ05684_a40110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857614.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MRRTYSQIDMDERRRIARWRAAGLSATVIAEKLGRHRSTIFRELKRNAFEDAQMPDLSGYYCVTANEMARERRAKLRKLARFVHVRQSVVERIMHGWSPQQIAGRMRLERHPICVSYETIYKFAYSADGQAIKLWRHLPERRARRRPRHARRRHGRRFSPELNILHRPDTVAERKQFGHWECDLIQFRKKFGKANVTSLVERVSRFAVFLRNNDRQSKPIMDGLIEVLQPLPHAARRSITFDRGTEFSEWPYLQAGIGTQTWFCDPQSPWQKGTVENTNGRVRKWLSREVDPLSISDGELRDICDRLNSTPRKCLGYRTPAEVFRKKLLAQIRRVG
SIO_010081: SJ05684_RS28720
subclass of: SO_0000673
so part of: SJ05684_RS28720
location: complement(291269..292279)
location: region:291269-292279:-1
so has part: feature:291269-292279:-1:exon

WP_014857614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291269-292279:-1:exon

SJ05684_RS28725
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28725
old locus tag: SJ05684_a40120
so part of: sequence
location: complement(292486..293031)
location: region:292486-293031:-1
so has part: feature:292486-293031:-1:exon
subclass of: SO_0000010

position:292486:-1
position: 292486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293031:-1
position: 293031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292486-293031:-1:exon

SJ05684_RS28725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28725
old locus tag: SJ05684_a40120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANTGAAKRIVEPLDPNRYDRAAFFCGIIQVDNFFKKTANKLSKADNLRVYVMTEDDGTTVIGFYAINSHSISYADLPERFSRTRPGHGSIPAAYISMIGRDLRYRGGGYGGDLLTDCLQRIAGIADQIGIAVVLLDVLVCGDEEKTSRRVALYSEYGFQPLPSMPLRMFLPIATIRSLMG
SIO_010081: SJ05684_RS28725
subclass of: SO_0000673
so part of: SJ05684_RS28725
location: complement(292486..293031)
location: region:292486-293031:-1
so has part: feature:292486-293031:-1:exon

WP_014857613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292486-293031:-1:exon

SJ05684_RS28730
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28730
old locus tag: SJ05684_a40130
so part of: sequence
location: complement(293031..293339)
location: region:293031-293339:-1
so has part: feature:293031-293339:-1:exon
subclass of: SO_0000010

position:293339:-1
position: 293339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293031-293339:-1:exon

SJ05684_RS28730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28730
old locus tag: SJ05684_a40130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MRAIKDVTIDIDEPNTVRMNFRTKERVKRTIQRAAALSGLDDSAFTINAAYQSAIATIAAHEATLLQTTDYQAFFDALDNPSKPTDRLRDAFKRYSETVVSK
SIO_010081: SJ05684_RS28730
subclass of: SO_0000673
so part of: SJ05684_RS28730
location: complement(293031..293339)
location: region:293031-293339:-1
so has part: feature:293031-293339:-1:exon

WP_014857612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293031-293339:-1:exon

SJ05684_RS29925
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29925
pseudo: true
so part of: sequence
location: <293406..293480
location: region:293406-293480:1
so has part: feature:293406-293480:1:exon
subclass of: SO_0000010

position:293406:1
position: 293406
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:293480:1
position: 293480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293406-293480:1:exon

SJ05684_RS29925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
SIO_010081: SJ05684_RS29925
subclass of: SO_0000673
so part of: SJ05684_RS29925
location: <293406..293480
location: region:293406-293480:1
so has part: feature:293406-293480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293406-293480:1:exon

SJ05684_RS28735
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28735
old locus tag: SJ05684_a40140
pseudo: true
so part of: sequence
location: 293529..>294032
location: region:293529-294032:1
so has part: feature:293529-294032:1:exon
subclass of: SO_0000010

position:293529:1
position: 293529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294032:1
position: 294032
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293529-294032:1:exon

SJ05684_RS28735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28735
old locus tag: SJ05684_a40140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611752.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase zinc-finger binding domain-containing protein
SIO_010081: SJ05684_RS28735
subclass of: SO_0000673
so part of: SJ05684_RS28735
location: 293529..>294032
location: region:293529-294032:1
so has part: feature:293529-294032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293529-294032:1:exon

SJ05684_RS28745
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28745
old locus tag: SJ05684_a40160
pseudo: true
so part of: sequence
location: complement(294561..294993)
location: region:294561-294993:-1
so has part: feature:294561-294993:-1:exon
subclass of: SO_0000010

position:294561:-1
position: 294561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294993:-1
position: 294993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294561-294993:-1:exon

SJ05684_RS28745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28745
old locus tag: SJ05684_a40160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003527383.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
SIO_010081: SJ05684_RS28745
subclass of: SO_0000673
so part of: SJ05684_RS28745
location: complement(294561..294993)
location: region:294561-294993:-1
so has part: feature:294561-294993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294561-294993:-1:exon

SJ05684_RS28755
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28755
so part of: sequence
location: complement(295517..296086)
location: region:295517-296086:-1
so has part: feature:295517-296086:-1:exon
subclass of: SO_0000010

position:295517:-1
position: 295517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296086:-1
position: 296086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295517-296086:-1:exon

SJ05684_RS28755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTPPRRFIVEFKQVRRRSKERTNSVWGNTDLKALTREVEEMAPHLFNLTEEPVSPNVAYGPPASPNAEFLIADKENIGLGPEAVTPAQGSENAFSGLHNSSHSAVDATDKLQETPPVSHTRTNSKQRISRKLPERLSLDGRENVERPISRDELATLEAENKRLKRLLAERILTQNLQLKKMLDRFNLN
SIO_010081: SJ05684_RS28755
subclass of: SO_0000673
so part of: SJ05684_RS28755
location: complement(295517..296086)
location: region:295517-296086:-1
so has part: feature:295517-296086:-1:exon

WP_064240030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295517-296086:-1:exon

SJ05684_RS28760
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28760
pseudo: true
so part of: sequence
location: complement(296265..296712)
location: region:296265-296712:-1
so has part: feature:296265-296712:-1:exon
subclass of: SO_0000010

position:296265:-1
position: 296265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296712:-1
position: 296712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296265-296712:-1:exon

SJ05684_RS28760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967898.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS28760
subclass of: SO_0000673
so part of: SJ05684_RS28760
location: complement(296265..296712)
location: region:296265-296712:-1
so has part: feature:296265-296712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296265-296712:-1:exon

SJ05684_RS28765
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28765
old locus tag: SJ05684_a40190
so part of: sequence
location: complement(296858..297289)
location: region:296858-297289:-1
so has part: feature:296858-297289:-1:exon
subclass of: SO_0000010

position:296858:-1
position: 296858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297289:-1
position: 297289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296858-297289:-1:exon

SJ05684_RS28765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28765
old locus tag: SJ05684_a40190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633385.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLSIAPEKKRAKANAVDIYVGRRIRQRRRWQNMPQAALGEAIGVTFQQVQKYEKGSNRVGAGRLQQISDALEVHPSYFFEDMPDDTQSIGQGAPNQAYIPPEVIEFAASDEGVELIRAFSRVGNPNVRCRIVKLLKSLGEHDW
SIO_010081: SJ05684_RS28765
subclass of: SO_0000673
so part of: SJ05684_RS28765
location: complement(296858..297289)
location: region:296858-297289:-1
so has part: feature:296858-297289:-1:exon

WP_015633385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296858-297289:-1:exon

SJ05684_RS28770
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodD1
locus tag: SJ05684_RS28770
old locus tag: SJ05684_a40200
so part of: sequence
location: complement(297889..298854)
location: region:297889-298854:-1
so has part: feature:297889-298854:-1:exon
subclass of: SO_0000010

position:297889:-1
position: 297889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298854:-1
position: 298854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297889-298854:-1:exon

SJ05684_RS28770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodD1
locus tag: SJ05684_RS28770
old locus tag: SJ05684_a40200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NodD1
translation: MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGRELVPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFFERVVVRVAREAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHTHPRAKLFDERFVCVSCPTNQKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTMIPPFLSGTDRIATLPLRLAMHFAKAIPLRITELPQPIFPAFTEAVQWPAPHSSDPASLWMREIFLQEASRVEFQSETSAHALSSSQLPTCL
SIO_010081: SJ05684_RS28770
subclass of: SO_0000673
so part of: SJ05684_RS28770
location: complement(297889..298854)
location: region:297889-298854:-1
so has part: feature:297889-298854:-1:exon

WP_014857603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297889-298854:-1:exon

SJ05684_RS28785
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28785
old locus tag: SJ05684_a40220
so part of: sequence
location: complement(299583..301037)
location: region:299583-301037:-1
so has part: feature:299583-301037:-1:exon
subclass of: SO_0000010

position:299583:-1
position: 299583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301037:-1
position: 301037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299583-301037:-1:exon

SJ05684_RS28785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28785
old locus tag: SJ05684_a40220
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020051287.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MLPKIIPAIMAGGRGTRLWPLSRATAAKQFLKLIGEETLFQDTLKRVSDAKVYGAPLVITNEEFRFLVAEQARELGVTLSSIVLEPVPRNTAAAVAVAARIVADRFGEDALLLVLPSDHAITVDDTYKKCVRSACIAAAEGKLVTFGIQPTWPATGYGYIERGTYLGKDVHAVQCFVEKPSLEKAAALLETGNYYWNSGMFLFQAASIIAELEEHAPDVLSAVHAAVRGSTVDADFIRLAPESFSQAPSISIDYALMEKTANAAVVCSDFAWSDLGSWDAVWKNEEQNADGNVLKGNVTACNTKNSLVLSHTAHLAVQGMDGVAVIASEDAVFVGRLEEAHEIGNLVKRLAADENTARLTELHPTLIRPWGGYTTMLNGDRFQVRRLFVRPGKMLSLHKHFHRSEHWICVKGTAEVTIEDRVTILHENQSIYIPEGAIHRLGNPGKIMLELVEIQTGAYLGEDDIIRVADESRNEMPDSRRTGL
SIO_010081: SJ05684_RS28785
subclass of: SO_0000673
so part of: SJ05684_RS28785
location: complement(299583..301037)
location: region:299583-301037:-1
so has part: feature:299583-301037:-1:exon

WP_048655408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299583-301037:-1:exon

SJ05684_RS28790
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28790
old locus tag: SJ05684_a40230
so part of: sequence
location: 301184..302599
location: region:301184-302599:1
so has part: feature:301184-302599:1:exon
subclass of: SO_0000010

position:301184:1
position: 301184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302599:1
position: 302599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301184-302599:1:exon

SJ05684_RS28790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28790
old locus tag: SJ05684_a40230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003520574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase
translation: MGPKFGTSGLRGLATELVGSVSALYATAFSRMLFDRGRVARGATVLVGRDFRDSSSEIAAICMAALARAGMVPVDCGGLPTPALALYGRKLGAASLMITGSHIPADRNGIKFYLPDGEINKADEQAITALAEQLSADADATRVECGRGADHSSEATDFYIQRYETLLPKSGLQGLKIGLYQHSSVARDILTTILEGHGANVVPVGRSEVFIPVDTEAISAATCKMLAAWAKEFAFDAIVSSDADADRPLLTDETGTPLRGDLLGLICARLLEAKLIATPITSNSGIEAASGVEVVRTRVGSPYVIAAMTEAVARGKQRVMGFEANGGVMLGSNFSFGGASLPALPTRDCVLPIIAALHMAVEAKTPLSGIVAMHRLPVALSGRIENYPFDRSDALVAFLKASKANVSHLFSRIGRVTGTDDVDGLRLTFEGGRILHIRPSGNAPELRCYVEADDPDAAEHLLAQGLAVLNS
SIO_010081: SJ05684_RS28790
subclass of: SO_0000673
so part of: SJ05684_RS28790
location: 301184..302599
location: region:301184-302599:1
so has part: feature:301184-302599:1:exon

WP_034859288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301184-302599:1:exon

SJ05684_RS28795
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodZ
locus tag: SJ05684_RS28795
so part of: sequence
location: 302914..303882
location: region:302914-303882:1
so has part: feature:302914-303882:1:exon
subclass of: SO_0000010

position:302914:1
position: 302914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303882:1
position: 303882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302914-303882:1:exon

SJ05684_RS28795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodZ
locus tag: SJ05684_RS28795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NodZ
translation: MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPIKDIAGVPFICDNQINEFSFPGPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDVEANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAIYQEHFYGYSAIGVHVRHGNGEDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLTIPKSFRADQSGPLHSPDLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVIEFDLNDPSRLVVIERSSTNTAS
SIO_010081: SJ05684_RS28795
subclass of: SO_0000673
so part of: SJ05684_RS28795
location: 302914..303882
location: region:302914-303882:1
so has part: feature:302914-303882:1:exon

WP_014857596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302914-303882:1:exon

SJ05684_RS28800
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: gmd
locus tag: SJ05684_RS28800
old locus tag: SJ05684_a40240
so part of: sequence
location: 304127..305182
location: region:304127-305182:1
so has part: feature:304127-305182:1:exon
subclass of: SO_0000010

position:304127:1
position: 304127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305182:1
position: 305182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304127-305182:1:exon

SJ05684_RS28800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: gmd
locus tag: SJ05684_RS28800
old locus tag: SJ05684_a40240
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875083.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MTDRKVALISGVTGQDGAYLAELLLDEGYIVHGIKRRSSSFNTQRIEHIYQERHDPEARFFLHYGDMTDSTNLLRIVQQTQPHEIYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGLIHRTRFYQASTSELYGLAQEIPQNEKTPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNGILFNHESPLRGETFVTRKITRAAAAISLGKQEVLYLGNLDAQRDWGHAREYVRGMWMMCQQDRPGDYVLATGVTTSVRTFVEWAFEETGMTIEWVGEGIEERGIDAATGKCVVAVDPRYFRPTEVDLLLGDATKARQVLGWRHETSVRDLACEMVREDLSYLRGTRQ
SIO_010081: SJ05684_RS28800
subclass of: SO_0000673
so part of: SJ05684_RS28800
location: 304127..305182
location: region:304127-305182:1
so has part: feature:304127-305182:1:exon

WP_014857595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304127-305182:1:exon

SJ05684_RS28805
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28805
old locus tag: SJ05684_a40250
so part of: sequence
location: 305197..306135
location: region:305197-306135:1
so has part: feature:305197-306135:1:exon
subclass of: SO_0000010

position:305197:1
position: 305197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306135:1
position: 306135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305197-306135:1:exon

SJ05684_RS28805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28805
old locus tag: SJ05684_a40250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875084.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-L-fucose synthase
translation: MYLLDGKRIWVAGHKGMVGSAIIRSLASEDCEVIVADRQKLDLTRQEEVEKFLSKEKPHAVIMAAAKVGGILANDTMPADFIYQNLIMEANVIEASFRSGVEKLLFLGSSCIYPKYAAQPIREEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISVMPTNLYGPRDKFDLTSSHVVPALIRKAHEAKIRDLGCLSIWGSGTPTRDFLYSEDCADALVFLLKHYSETEHINIGSGGEITIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYEWFVSNVADN
SIO_010081: SJ05684_RS28805
subclass of: SO_0000673
so part of: SJ05684_RS28805
location: 305197..306135
location: region:305197-306135:1
so has part: feature:305197-306135:1:exon

WP_034859283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305197-306135:1:exon

SJ05684_RS28810
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28810
so part of: sequence
location: complement(306028..306414)
location: region:306028-306414:-1
so has part: feature:306028-306414:-1:exon
subclass of: SO_0000010

position:306028:-1
position: 306028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306414:-1
position: 306414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306028-306414:-1:exon

SJ05684_RS28810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28810
EC number: 7.2.2.6
inference: COORDINATES: protein motif:HMM:NF014699.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium-transporting ATPase subunit C
translation: MQAFRQAEYFHGRPSAVDYDAASSGGTNLAPTNRELVDAVDERVGVIAEETGRPDVCGTHKRLARDPQAGGVGGSGAVGRLCKPVSMPESRPALIISHIADKPFIGFGQSQLERGLRAPTHRHESFAR
SIO_010081: SJ05684_RS28810
subclass of: SO_0000673
so part of: SJ05684_RS28810
location: complement(306028..306414)
location: region:306028-306414:-1
so has part: feature:306028-306414:-1:exon

WP_080577843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306028-306414:-1:exon

SJ05684_RS28815
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28815
so part of: sequence
location: 307319..307843
location: region:307319-307843:1
so has part: feature:307319-307843:1:exon
subclass of: SO_0000010

position:307319:1
position: 307319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307843:1
position: 307843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307319-307843:1:exon

SJ05684_RS28815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28815
inference: COORDINATES: protein motif:HMM:NF024092.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MSARRTVEEWIRRFNKGDAIALAELYHENAMCLWPMQRPVIGRAAIQKIFRPNRAIAERICAPEFIYEEDDRVIIEWWDRFAWQGCGVFIMRGSRIAFSYWDIVSSDAFSKEFGRTNQYTRKTDSHRIILGDKNARRSITSLAAAVPSWIVRFIRGPDCISAASNARKTDDGAK
SIO_010081: SJ05684_RS28815
subclass of: SO_0000673
so part of: SJ05684_RS28815
location: 307319..307843
location: region:307319-307843:1
so has part: feature:307319-307843:1:exon

WP_015633390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307319-307843:1:exon

SJ05684_RS28820
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: hpnC
locus tag: SJ05684_RS28820
old locus tag: SJ05684_a40260
so part of: sequence
location: 307840..308718
location: region:307840-308718:1
so has part: feature:307840-308718:1:exon
subclass of: SO_0000010

position:307840:1
position: 307840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308718:1
position: 308718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307840-308718:1:exon

SJ05684_RS28820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: hpnC
locus tag: SJ05684_RS28820
old locus tag: SJ05684_a40260
EC number: 2.5.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875085.1
GO function: GO:0004311 - farnesyltranstransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: squalene synthase HpnC
translation: MTSGSGPGSDAMHREKNFPVASWIIHPRHRALILAFYRFVRMADDIADHATLAADEKLLYLDILEAELLGKGETRAEAVHLRTALDRRGMPPRHALDLLTAFRTDVTKQRYENWDEVIDYCQYSAMPVGRFVLDVHGESAATWPASDVLCAGLQVCNHLQDCGKDFRNLNRVYIPRDALLASGASIEELGAAKSSLQMLQCLRSLAAKAEVLLNGGGALVSQVKDFRLGFEVSVILSFADKIVSMLKMRDPLRERVHLSPLELLLHGAGAMANEAARRAFGRGTRFKTTVDV
SIO_010081: SJ05684_RS28820
subclass of: SO_0000673
so part of: SJ05684_RS28820
location: 307840..308718
location: region:307840-308718:1
so has part: feature:307840-308718:1:exon

WP_034859281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307840-308718:1:exon

SJ05684_RS28825
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: hpnD
locus tag: SJ05684_RS28825
old locus tag: SJ05684_a40270
so part of: sequence
location: 308715..309551
location: region:308715-309551:1
so has part: feature:308715-309551:1:exon
subclass of: SO_0000010

position:308715:1
position: 308715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309551:1
position: 309551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308715-309551:1:exon

SJ05684_RS28825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: hpnD
locus tag: SJ05684_RS28825
old locus tag: SJ05684_a40270
EC number: 2.5.1.103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015687465.1
GO function: GO:0016767 - geranylgeranyl-diphosphate geranylgeranyltransferase activity [Evidence IEA]
GO process: GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: presqualene diphosphate synthase HpnD
translation: MRAEAAAHANHRSTALGSSFYLGMRTLPPVQREAIFQIYSFCRQVDDITDSDEPREHRLAALQQWRDHIDALYQGVPPPRLKDYLASVTTFGLKREDFLAVVDGMEMDVLQDIRAPKMATLDLYCDRVASAVGRMSVRVFGLSEEDGIALAHHLGRALQLTNILRDIDEDAGLGRLYIPRESLDHAGITSSDPHKVIADKALPKACAPLAQRAMMHFAESDEIMNCNPRRIVRAPTIMSKCYRAILDLLLIRGFAAPREPVRVTNLTKLAILFRYALM
SIO_010081: SJ05684_RS28825
subclass of: SO_0000673
so part of: SJ05684_RS28825
location: 308715..309551
location: region:308715-309551:1
so has part: feature:308715-309551:1:exon

WP_014857590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308715-309551:1:exon

SJ05684_RS28830
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: hpnE
locus tag: SJ05684_RS28830
old locus tag: SJ05684_a40280
so part of: sequence
location: 309551..310858
location: region:309551-310858:1
so has part: feature:309551-310858:1:exon
subclass of: SO_0000010

position:310858:1
position: 310858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309551-310858:1:exon

SJ05684_RS28830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: hpnE
locus tag: SJ05684_RS28830
old locus tag: SJ05684_a40280
EC number: 1.17.8.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875087.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxysqualene dehydroxylase HpnE
translation: MPKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLVLSGNQYVRNYARAIGTESGLVGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFDKARRVPDTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPLLLAALNCDPPEGSAGLAGAIVRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSGEIISELDFGDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPAGADPILGVVGGLVEWLFAYPQRFSVTISNGDRLLDIPREELVRAIWRDVCEAGGISGELPPWQIVCERRATFEATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAADLALSDKHSIGKSTRFCTLPNTQEVSE
SIO_010081: SJ05684_RS28830
subclass of: SO_0000673
so part of: SJ05684_RS28830
location: 309551..310858
location: region:309551-310858:1
so has part: feature:309551-310858:1:exon

WP_014857589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309551-310858:1:exon

SJ05684_RS28835
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: shc
locus tag: SJ05684_RS28835
old locus tag: SJ05684_a40290
so part of: sequence
location: 310902..312794
location: region:310902-312794:1
so has part: feature:310902-312794:1:exon
subclass of: SO_0000010

position:310902:1
position: 310902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312794:1
position: 312794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310902-312794:1:exon

SJ05684_RS28835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: shc
locus tag: SJ05684_RS28835
old locus tag: SJ05684_a40290
EC number: 5.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875088.1
GO function: GO:0051007 - squalene-hopene cyclase activity [Evidence IEA]
GO process: GO:0019746 - hopanoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: squalene--hopene cyclase
translation: MSIASATEALLAYRHADGHWVFELEADSTIPSEYILLRHYLAEPIDVVLEAKIGTYLRRTQGAHGGWPLVHDGPFDMSASVKSYFALKMIGDSVDAAHMVKAREAIRARGGAANSNVLTRFLLALYGVVSWRAVPVLPIEIVLLPIWSPFHLYKISYWARTTIVPLMVLAVLKPRAKNPKGVGIEELFLQDTKSVGMNPKAPHQSWGWFLLFRGIDGILRVIEPHLPKKLRERAIASALAFTEERLNGEDGMGAIYPSMANIVMMYDALGKDDHFPPRAIARRAIDKLLVIGEEEAYCQPCLSPVWDTALTCHALQEVGGANALAKAKQGLDWLKPRQVLDVKGDWAVKAPNIRPGGWPFQYNNAHYPDLDDTAVVVMAMDRAQRHAGSKEYATAIARGREWIEGMQSRDGGWAAFDVNNLEYYLNNLPFADHGALLDPPTEDVTARCVSMLAQVGEFTQSSKAVAEGIAYLRRTQHAEGSWYGRWGLNYIYGTWSVLCALNAAGIDHQDPMIRKAVEWLVSIQSWDGGWGEDAISYRLDYSGYEQAPSTSSQTAWALLGLMAAGEVEHPAVARGVNYLKNAQTENGLWDEQRYTATGFPRVFYLRYHGYSKFFPLWALARYRNLRSTNV
SIO_010081: SJ05684_RS28835
subclass of: SO_0000673
so part of: SJ05684_RS28835
location: 310902..312794
location: region:310902-312794:1
so has part: feature:310902-312794:1:exon

WP_050980215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310902-312794:1:exon

SJ05684_RS28840
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28840
pseudo: true
so part of: sequence
location: complement(<313061..>313232)
location: region:313061-313232:-1
so has part: feature:313061-313232:-1:exon
subclass of: SO_0000010

position:313061:-1
position: 313061
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:313232:-1
position: 313232
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313061-313232:-1:exon

SJ05684_RS28840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330260.1
note: catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein
SIO_010081: SJ05684_RS28840
subclass of: SO_0000673
so part of: SJ05684_RS28840
location: complement(<313061..>313232)
location: region:313061-313232:-1
so has part: feature:313061-313232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313061-313232:-1:exon

SJ05684_RS28845
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28845
so part of: sequence
location: complement(313239..313487)
location: region:313239-313487:-1
so has part: feature:313239-313487:-1:exon
subclass of: SO_0000010

position:313239:-1
position: 313239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313487:-1
position: 313487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313239-313487:-1:exon

SJ05684_RS28845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018097467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKNLIHNVGPNDARRDHVDIGDAVRRSREAVGYSVDDLALTCGLTCAEISRIELGADVDPERLRRVVAALRVPATTFALKHS
SIO_010081: SJ05684_RS28845
subclass of: SO_0000673
so part of: SJ05684_RS28845
location: complement(313239..313487)
location: region:313239-313487:-1
so has part: feature:313239-313487:-1:exon

WP_078070602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313239-313487:-1:exon

SJ05684_RS28855
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28855
old locus tag: SJ05684_a40300
so part of: sequence
location: complement(313796..314815)
location: region:313796-314815:-1
so has part: feature:313796-314815:-1:exon
subclass of: SO_0000010

position:313796:-1
position: 313796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314815:-1
position: 314815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313796-314815:-1:exon

SJ05684_RS28855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28855
old locus tag: SJ05684_a40300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857586.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDQPAWKNPRTALIVDGSDAARQRRIPNLASVDLNLLVELEALLQYRNITHAAQHVGRSQPAMSRALSRLRDMFNDDLLVRGSSGLVPTPQAEHLAQMLPSVLNAIRELVSCSSGLRDLRSKVTMAMPDHQSLVLLPYLLPRLGERVPHVDIATEPLLDGALRRLEQGEIDFAIGQIGAAPPGYLRRGLYADRFTCLLRHDHPALEQEWSVGTFAALRHASIASDSNEGLGQVYDGLVRFGLPGPIVVSNVLTAAVVVAMTDLVLMIPNRVATRVATMLPLAIVDPPVELKPYEVALIWHQRCHHDLEHRVLRREIAAAARMGRLDVSQDQMARRQNDS
SIO_010081: SJ05684_RS28855
subclass of: SO_0000673
so part of: SJ05684_RS28855
location: complement(313796..314815)
location: region:313796-314815:-1
so has part: feature:313796-314815:-1:exon

WP_014857586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313796-314815:-1:exon

SJ05684_RS28875
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28875
old locus tag: SJ05684_a40310
so part of: sequence
location: 316846..317148
location: region:316846-317148:1
so has part: feature:316846-317148:1:exon
subclass of: SO_0000010

position:316846:1
position: 316846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317148:1
position: 317148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316846-317148:1:exon

SJ05684_RS28875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28875
old locus tag: SJ05684_a40310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007536583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF982 domain-containing protein
translation: MLNPELVWMTPVTVHMKDGASQVFASVNDVLDFLEGDWAIYRGRKYNRAVQTCRRALNRVTPVAIAREAFIDACRGAGMSTGADGPPGAKTGTGGQRSLT
SIO_010081: SJ05684_RS28875
subclass of: SO_0000673
so part of: SJ05684_RS28875
location: 316846..317148
location: region:316846-317148:1
so has part: feature:316846-317148:1:exon

WP_014330927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316846-317148:1:exon

SJ05684_RS30810
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30810
old locus tag: SJ05684_a40320
pseudo: true
so part of: sequence
location: <317452..317607
location: region:317452-317607:1
so has part: feature:317452-317607:1:exon
subclass of: SO_0000010

position:317452:1
position: 317452
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:317607:1
position: 317607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317452-317607:1:exon

SJ05684_RS30810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30810
old locus tag: SJ05684_a40320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330918.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF982 domain-containing protein
SIO_010081: SJ05684_RS30810
subclass of: SO_0000673
so part of: SJ05684_RS30810
location: <317452..317607
location: region:317452-317607:1
so has part: feature:317452-317607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317452-317607:1:exon

SJ05684_RS30815
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30815
so part of: sequence
location: 317617..317898
location: region:317617-317898:1
so has part: feature:317617-317898:1:exon
subclass of: SO_0000010

position:317617:1
position: 317617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317898:1
position: 317898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317617-317898:1:exon

SJ05684_RS30815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMDDLFKQIAATAVNIGPEVLASHWSPLRRPMDVVKAPALSVDDKRAILAAWASDFYAIDSKPALRHMPGTPEPVSIDEVRSALRELDSRYDI
SIO_010081: SJ05684_RS30815
subclass of: SO_0000673
so part of: SJ05684_RS30815
location: 317617..317898
location: region:317617-317898:1
so has part: feature:317617-317898:1:exon

WP_014330287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317617-317898:1:exon

SJ05684_RS28890
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28890
old locus tag: SJ05684_a40330
pseudo: true
so part of: sequence
location: <318118..318261
location: region:318118-318261:1
so has part: feature:318118-318261:1:exon
subclass of: SO_0000010

position:318118:1
position: 318118
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:318261:1
position: 318261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318118-318261:1:exon

SJ05684_RS28890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28890
old locus tag: SJ05684_a40330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012706575.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SPW repeat protein
SIO_010081: SJ05684_RS28890
subclass of: SO_0000673
so part of: SJ05684_RS28890
location: <318118..318261
location: region:318118-318261:1
so has part: feature:318118-318261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318118-318261:1:exon

SJ05684_RS30885
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30885
so part of: sequence
location: complement(318391..318762)
location: region:318391-318762:-1
so has part: feature:318391-318762:-1:exon
subclass of: SO_0000010

position:318391:-1
position: 318391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318762:-1
position: 318762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318391-318762:-1:exon

SJ05684_RS30885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30885
inference: COORDINATES: protein motif:HMM:NF016674.2
GO function: GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ETC complex I subunit
translation: MTWLTEPLARDRQSGRADRKFVEHVSTSQPLDINCPRPNIHPVARIFRPSRSVMTSARVSGRPWLLVFERQAPPVIDCLMGYTGGSDTLTQVELHFPTRDAAIAYAKRQKLNCTVVDDRSRRP
SIO_010081: SJ05684_RS30885
subclass of: SO_0000673
so part of: SJ05684_RS30885
location: complement(318391..318762)
location: region:318391-318762:-1
so has part: feature:318391-318762:-1:exon

WP_014330285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318391-318762:-1:exon

SJ05684_RS28900
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28900
old locus tag: SJ05684_a40340
so part of: sequence
location: complement(318828..319337)
location: region:318828-319337:-1
so has part: feature:318828-319337:-1:exon
subclass of: SO_0000010

position:318828:-1
position: 318828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319337:-1
position: 319337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318828-319337:-1:exon

SJ05684_RS28900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28900
old locus tag: SJ05684_a40340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004119772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MNVGDLIPWSRGSSQLPSSYRGDDMDPFLSLHRNVNRLFDEVFRGFAPPSSFAGSSPFRGSWPHVEIEENDNEIRVLAEVPGIEPDDIEVLLEDGMLTLRGESKSETEDKDRRFSERYHGRFERRLSLGGQVEEGKVAATFKNGLLTVTLTKSEKARANVKRITIDSTK
SIO_010081: SJ05684_RS28900
subclass of: SO_0000673
so part of: SJ05684_RS28900
location: complement(318828..319337)
location: region:318828-319337:-1
so has part: feature:318828-319337:-1:exon

WP_034859295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318828-319337:-1:exon

SJ05684_RS28905
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28905
old locus tag: SJ05684_a40350
so part of: sequence
location: complement(319436..319897)
location: region:319436-319897:-1
so has part: feature:319436-319897:-1:exon
subclass of: SO_0000010

position:319436:-1
position: 319436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319897:-1
position: 319897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319436-319897:-1:exon

SJ05684_RS28905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28905
old locus tag: SJ05684_a40350
function: Molecular chaperone (small heat shock protein)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018237628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MRTNLDFAPFYRSSIGFDRIFELLENASLNADNWPPYNIVKLGEDAYRIAIAAAGFAEDELTITHEANMLVVNGVKSEDEEVQYLHHALPVRPFVRRFELADHVIVEGAKLENGLLVITLRKEIPEEMKPRRIAIETEMTKPASKQIEGDKAA
SIO_010081: SJ05684_RS28905
subclass of: SO_0000673
so part of: SJ05684_RS28905
location: complement(319436..319897)
location: region:319436-319897:-1
so has part: feature:319436-319897:-1:exon

WP_014330283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319436-319897:-1:exon

SJ05684_RS28910
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28910
old locus tag: SJ05684_a40360
so part of: sequence
location: 320261..320575
location: region:320261-320575:1
so has part: feature:320261-320575:1:exon
subclass of: SO_0000010

position:320261:1
position: 320261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320575:1
position: 320575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320261-320575:1:exon

SJ05684_RS28910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28910
old locus tag: SJ05684_a40360
function: Co-chaperonin GroES (HSP10)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017276605.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MTFRPLHDRILVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVAAGPGARDDSGQLRPLDVKVGDRILFGKWSGTEIKLNGEDLLIMKESDVMGVIEVDAAARNAA
SIO_010081: SJ05684_RS28910
subclass of: SO_0000673
so part of: SJ05684_RS28910
location: 320261..320575
location: region:320261-320575:1
so has part: feature:320261-320575:1:exon

WP_014330282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320261-320575:1:exon

SJ05684_RS28915
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: groL
locus tag: SJ05684_RS28915
old locus tag: SJ05684_a40370
so part of: sequence
location: 320630..322258
location: region:320630-322258:1
so has part: feature:320630-322258:1:exon
subclass of: SO_0000010

position:320630:1
position: 320630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322258:1
position: 322258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320630-322258:1:exon

SJ05684_RS28915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: groL
locus tag: SJ05684_RS28915
old locus tag: SJ05684_a40370
function: Chaperonin GroEL (HSP60 family)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018493252.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAAKEVKFHSDAREKMLRGVDILANAVKVTLGPKGRNVVIEKSYGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGIDKAVDAIVEELKTNARKVTRNDEIAQVGTISANGDTEIGRFLADAVEKVGNEGVITVEEAKTAVTELEVVEGMQFDRGYLSPYFITNPDKMRVELEEPYILIHEKKLSNLQALLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTAVSEDLGIKLENVTLNMLGRAKKVVVEKENTTIVDGAGSKTEIQGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAVKALDNAQTENADQRHGIEIVRRALEAPVRQIAENAGAEGSIIVGKLREKTEFGFGWNAQTNEFGDLYDQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPKKEAPLPPMPGGGMDF
SIO_010081: SJ05684_RS28915
subclass of: SO_0000673
so part of: SJ05684_RS28915
location: 320630..322258
location: region:320630-322258:1
so has part: feature:320630-322258:1:exon

WP_014330281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320630-322258:1:exon

SJ05684_RS28920
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28920
old locus tag: SJ05684_a40380
so part of: sequence
location: 322455..323795
location: region:322455-323795:1
so has part: feature:322455-323795:1:exon
subclass of: SO_0000010

position:322455:1
position: 322455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323795:1
position: 323795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322455-323795:1:exon

SJ05684_RS28920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28920
old locus tag: SJ05684_a40380
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017264700.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Do family serine endopeptidase
translation: MTARPSKYVGVFAALVLILVPAPLPAARPPSAISASIQPSLADVLEDVTPAVVNIAVRSRAPAETNPLYNDPFFRRYFNLPEQQQRLSAGSGVIVDADKGYILTNHHVVADAGEIAVTLKDRRRFTAELVGSDESTDIALLKIDAEKLKALPLGDSNALRVGDTVVAIGNPFGLGQTVTSGIVSALGRGGINVEGYEDFIQTDASINPGNSGGALVTADGLLVGVNTAIIAPAGGNVGIGFAVPIAMASAVMEQLIEHGEVRRGRIGISVQDLTPDLAEALSIEENYGAVVGSVEQDSPAAQAGLQAGDVITAVNDRKITGSADLRNRVGLAPVGSEVEIEYLRDRVRKTVTMRIEPDETIAKSGSMSSRLDGAEFQDAAGNVVVSSVEDGSAAARAGLRMGDVIVAANRRPIATVAELETALTNASGTIVLDLFRAGSKHVLVIR
SIO_010081: SJ05684_RS28920
subclass of: SO_0000673
so part of: SJ05684_RS28920
location: 322455..323795
location: region:322455-323795:1
so has part: feature:322455-323795:1:exon

WP_034859293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322455-323795:1:exon

SJ05684_RS28925
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28925
old locus tag: SJ05684_a40390
so part of: sequence
location: 323851..324162
location: region:323851-324162:1
so has part: feature:323851-324162:1:exon
subclass of: SO_0000010

position:323851:1
position: 323851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324162:1
position: 324162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323851-324162:1:exon

SJ05684_RS28925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28925
old locus tag: SJ05684_a40390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF982 domain-containing protein
translation: MKHDCFRHPVTILVGLGFPAEIRGLREAYAWLNEWPPSKRNATHAIALNACRAALAGEIDVETARGTFVAFARRANLLAPDTEAIIAGGRADARAQAGNSKSV
SIO_010081: SJ05684_RS28925
subclass of: SO_0000673
so part of: SJ05684_RS28925
location: 323851..324162
location: region:323851-324162:1
so has part: feature:323851-324162:1:exon

WP_014330279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323851-324162:1:exon

SJ05684_RS28930
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28930
so part of: sequence
location: 324183..324515
location: region:324183-324515:1
so has part: feature:324183-324515:1:exon
subclass of: SO_0000010

position:324183:1
position: 324183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324515:1
position: 324515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324183-324515:1:exon

SJ05684_RS28930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28930
inference: COORDINATES: protein motif:HMM:NF017934.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF982 domain-containing protein
translation: MSDIQFPVPVRLHLNSAGERVVANSWEALECLRDHWPEGARGRTYRAAYRVCRDVLDGWRQPYEARRAFVKAARRAGLLEDIALVPPPSNARTKPDHRHAVRYFRPIKGR
SIO_010081: SJ05684_RS28930
subclass of: SO_0000673
so part of: SJ05684_RS28930
location: 324183..324515
location: region:324183-324515:1
so has part: feature:324183-324515:1:exon

WP_014330278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324183-324515:1:exon

SJ05684_RS30825
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30825
so part of: sequence
location: 324520..324726
location: region:324520-324726:1
so has part: feature:324520-324726:1:exon
subclass of: SO_0000010

position:324520:1
position: 324520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324726:1
position: 324726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324520-324726:1:exon

SJ05684_RS30825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015886709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCPSIDFYSLPLSPDDLDTLQRILDRELEARHISNDSDEAGMLARTLIELFQTGVRGEDALREMVKAT
SIO_010081: SJ05684_RS30825
subclass of: SO_0000673
so part of: SJ05684_RS30825
location: 324520..324726
location: region:324520-324726:1
so has part: feature:324520-324726:1:exon

WP_014330914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324520-324726:1:exon

SJ05684_RS28940
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28940
old locus tag: SJ05684_a40410
so part of: sequence
location: complement(324969..325613)
location: region:324969-325613:-1
so has part: feature:324969-325613:-1:exon
subclass of: SO_0000010

position:324969:-1
position: 324969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325613:-1
position: 325613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324969-325613:-1:exon

SJ05684_RS28940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28940
old locus tag: SJ05684_a40410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661793.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MGQRAAIYCRVSTADQSCERQERDLTAFAGRAGYDVAGIFKETGSGAKLDRAERRKIMALAQARQIDAVLVTELSRWGRSTIDLLNTLRELENWKVSVIAMNGMTFDLSSPHGRMLATFLSGIAEFERDLISERVKSGLAAARARGKQLGRRMGQRPKSDRLAPRVLALIAEGRSYRWIARDLGISKNTVADVAQRFRATEPSRRPTEYPDGER
SIO_010081: SJ05684_RS28940
subclass of: SO_0000673
so part of: SJ05684_RS28940
location: complement(324969..325613)
location: region:324969-325613:-1
so has part: feature:324969-325613:-1:exon

WP_034859270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324969-325613:-1:exon

SJ05684_RS28945
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28945
old locus tag: SJ05684_a40420
so part of: sequence
location: 325710..328607
location: region:325710-328607:1
so has part: feature:325710-328607:1:exon
subclass of: SO_0000010

position:325710:1
position: 325710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328607:1
position: 328607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325710-328607:1:exon

SJ05684_RS28945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28945
old locus tag: SJ05684_a40420
function: Transposase and inactivated derivatives, TnpA family
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRHILTERQRSALFDLPTDELSLLRHYTLADDDLEHIRERRRPENRLGFALQLCALRYPGRALAPGEMIPQEVLSFIGAQLGISADALLTYAARRQTRQQHMEALRKIYGYKTFAGRGARDLRDWLFDQAEDARSNEDLAQRFVTQCRKALTILPAVSTIERLCADALVTAERRIETRIAERLDADARERLDGLLAEVMVGNISRFIWLRQFEVGNNSASANRLLDRLEFLRSLEIDPRVLAGIPPHRIARLRRQGERYFTDGLRDISSDRRWAILAVCAVEWEAAIADAIIETHDRIVGKTWREAKRLHDERIAGSKAAVTDTLRAFTALGATLLEARDDGIPLDTVLARSAEWHQLEQLVAAGTQLTNTLADEPLAHVEHGYHRFRRYAPRMLRCLKLRAAPVAEPLIAAAKTIGEMRVFTSADVSFLRPNSKWHRHLRAQHRGDGRLWEVAVLFHLRDAFRSGDIWLDHSRRYGDLKQILVPITSAQANARLAVPLDPQTWLADRKARLADGLKRLARAARDGTIPHGSIEDGTLRIDRLTADVPENAEELVLDLYRRMPPVRITDILLEVDAAIGFSDAFSHLRTGAPCSDRVGLLNVLLAEGLNLGLRKMAEASNTHDYWQLSRLARWHVESEAMNQALAMVVAAQGKLPMSRFWGMGTTASSDGQFFPSAGQGEAMNLVNAKYGNEPGLKAYTHVNDQFAPFASQTIPATVSEAPYILDGLLMNEAGRQVGEQYADTAGFTDHLFGTSAMLGYRLVLRIRDLPSKRLYVFNPAGTPKDLRKLVGGKIREELIVANWPDLFRCAATMAAGKIRPSQLLRKLASYPRQNDLAAALREVGRVERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRISGLNLLTAIIIYWNTVHLGHAIAERRNESLDVPPELLAHISPLGWAHILLTGEYLWPTEANA
SIO_010081: SJ05684_RS28945
subclass of: SO_0000673
so part of: SJ05684_RS28945
location: 325710..328607
location: region:325710-328607:1
so has part: feature:325710-328607:1:exon

WP_014330276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325710-328607:1:exon

SJ05684_RS28950
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28950
so part of: sequence
location: complement(329068..329685)
location: region:329068-329685:-1
so has part: feature:329068-329685:-1:exon
subclass of: SO_0000010

position:329068:-1
position: 329068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329685:-1
position: 329685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329068-329685:-1:exon

SJ05684_RS28950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28950
inference: COORDINATES: protein motif:HMM:NF015505.2
GO function: GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YopT-type cysteine protease domain-containing protein
translation: MLRDPNNPSTSSPARPSTSLFRYRTAELAQANADGICVGLTAEWLRNLNSHPSIRMEALVPGSQRHASAAVRQKEYENLKVHLRRQGAGPSEADFAAQNTMLQKAGLAPSGKEKVYNVGEPNFSRMLTKITADGSNHLLSLYFAEGGAHTVATSAMDGNTTLFDPNFGEFTVQSDQIDDLFRSLANRYSNPNRQHFTTVTTQKVT
SIO_010081: SJ05684_RS28950
subclass of: SO_0000673
so part of: SJ05684_RS28950
location: complement(329068..329685)
location: region:329068-329685:-1
so has part: feature:329068-329685:-1:exon

WP_244425044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329068-329685:-1:exon

SJ05684_RS30830
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30830
pseudo: true
so part of: sequence
location: <330234..>330409
location: region:330234-330409:1
so has part: feature:330234-330409:1:exon
subclass of: SO_0000010

position:330234:1
position: 330234
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:330409:1
position: 330409
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330234-330409:1:exon

SJ05684_RS30830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014528085.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: SJ05684_RS30830
subclass of: SO_0000673
so part of: SJ05684_RS30830
location: <330234..>330409
location: region:330234-330409:1
so has part: feature:330234-330409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330234-330409:1:exon

SJ05684_RS28965
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28965
old locus tag: SJ05684_a40440
so part of: sequence
location: complement(330435..330650)
location: region:330435-330650:-1
so has part: feature:330435-330650:-1:exon
subclass of: SO_0000010

position:330435:-1
position: 330435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330650:-1
position: 330650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330435-330650:-1:exon

SJ05684_RS28965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28965
old locus tag: SJ05684_a40440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MICSSRIQPTFDRIFIGIIGSLERQNRVAEQSQRLGCFYAGVYMALLFVVVDLREHRPVPPHYNRKPVAGG
SIO_010081: SJ05684_RS28965
subclass of: SO_0000673
so part of: SJ05684_RS28965
location: complement(330435..330650)
location: region:330435-330650:-1
so has part: feature:330435-330650:-1:exon

WP_014857579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330435-330650:-1:exon

SJ05684_RS28970
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS28970
old locus tag: SJ05684_a40460
so part of: sequence
location: complement(331057..332136)
location: region:331057-332136:-1
so has part: feature:331057-332136:-1:exon
subclass of: SO_0000010

position:331057:-1
position: 331057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332136:-1
position: 332136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331057-332136:-1:exon

SJ05684_RS28970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS28970
old locus tag: SJ05684_a40460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MRTGIAFTVSPTDRQRLRALISDRNAPQKHVWRAEIILLSADGVGTVEIMRQTGKSKTCVWRWQERFATEGFEGLLRDKTRPSRIAPLGPEIGEQVVALSLADPPGETTHWTADMMAAEVGVSASAVRRIWKAHGLQPHRWRAFKLSNDPQFVAKLKDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAQVPADKAIHVILDNYAAHKHPKVRAWLDRHQRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVVDLQAAINRFLTEHNQQPKPFTWTADPDKIIAAVKRGHQVLDSIH
SIO_010081: SJ05684_RS28970
subclass of: SO_0000673
so part of: SJ05684_RS28970
location: complement(331057..332136)
location: region:331057-332136:-1
so has part: feature:331057-332136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331057-332136:-1:exon

SJ05684_RS30835
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30835
old locus tag: SJ05684_a40470
so part of: sequence
location: complement(332924..333439)
location: region:332924-333439:-1
so has part: feature:332924-333439:-1:exon
subclass of: SO_0000010

position:332924:-1
position: 332924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333439:-1
position: 333439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332924-333439:-1:exon

SJ05684_RS30835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30835
old locus tag: SJ05684_a40470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875211.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLEREDPVMLFAGIRAAQEELGKRVDRRGLNAGTEEPLAIDLQRFTVSLKTAWQAGEKRPTHRRPYRRTKPYPKRPSMLEPFEPQIRAWLEADPALSAAAVLQRLVSADPSRFTKKALRTVQMAVKAWRMEIAGQIILDGDWMKRAPVSPPAAAGGDTGHLNAPNFSNIPG
SIO_010081: SJ05684_RS30835
subclass of: SO_0000673
so part of: SJ05684_RS30835
location: complement(332924..333439)
location: region:332924-333439:-1
so has part: feature:332924-333439:-1:exon

WP_050980240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332924-333439:-1:exon

SJ05684_RS30840
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30840
so part of: sequence
location: complement(333415..333936)
location: region:333415-333936:-1
so has part: feature:333415-333936:-1:exon
subclass of: SO_0000010

position:333415:-1
position: 333415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333936:-1
position: 333936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333415-333936:-1:exon

SJ05684_RS30840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MVLTDIATGWTECVPVRTRESGLVIAALNQARSLFPFPLQGVDFDNDSAFMNERVVCWCRSQGLEVTRSRAYRKNDQAWVEQKNGAIVRRLVGYGRLVGAEATVVLGRLYDVVRLYGNLFQPSFSCERRHGSAPASSNATIRPCRLSRGWLPIPVWPRPIRSGCRRCWKGKIR
SIO_010081: SJ05684_RS30840
subclass of: SO_0000673
so part of: SJ05684_RS30840
location: complement(333415..333936)
location: region:333415-333936:-1
so has part: feature:333415-333936:-1:exon

WP_153458867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333415-333936:-1:exon

SJ05684_RS28990
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS28990
old locus tag: SJ05684_a40480
so part of: sequence
location: 334144..335694
location: region:334144-335694:1
so has part: feature:334144-335694:1:exon
subclass of: SO_0000010

position:334144:1
position: 334144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335694:1
position: 335694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334144-335694:1:exon

SJ05684_RS28990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istA
locus tag: SJ05684_RS28990
old locus tag: SJ05684_a40480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISRsp2 family transposase
translation: MPRRKQARRTTVRDIRTILRLTHEEGLSVREIAERLKIGKSSVSTYLLRAREAGLSWPLPVGADEDAKLERRLFGRAGRPPRDLSEPDWALVVRELKRKGVTLTLLWQEYRANHPDGYGFTWFCEQVAAFRQRTSVAFRNRHAAGAVMQTDYAGPTVPVIDPATGVIHPAQIFVAVLGASNLTFAHASSSQQLPDWIDGQVRALTFYGGVTKAIVCDNLKSGVAKALWFEPTLTATFAAMAEHYDTTILPTRSRKPRDKGRVEGAVLIVERWILARLRNRTFFSLAALNTAIAELLEELNNRTMRHVGKSRRELFEEIERAALKPLPAVPFEYAEWKSAKVHPDYHVEVDKTFYSVPHRLIGCTLQVRLTHRVVEIFHDHQRVASHVRRSQRSGHVTVNDHMPKAHQRYANTTPANLIGRATQIGPNAAILVERMMRDRPHPEQGYRSAMGILSLAPRYGSQRLDAACERALTINAISYSSVASILKSGLDRERPQAEHAAPTPAHTNIRGRSYYQ
SIO_010081: SJ05684_RS28990
subclass of: SO_0000673
so part of: SJ05684_RS28990
location: 334144..335694
location: region:334144-335694:1
so has part: feature:334144-335694:1:exon

WP_034859779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334144-335694:1:exon

SJ05684_RS28995
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS28995
old locus tag: SJ05684_a40490
pseudo: true
so part of: sequence
location: 335706..>336173
location: region:335706-336173:1
so has part: feature:335706-336173:1:exon
subclass of: SO_0000010

position:335706:1
position: 335706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336173:1
position: 336173
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335706-336173:1:exon

SJ05684_RS28995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS28995
old locus tag: SJ05684_a40490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012708757.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISRsp2 family helper ATPase IstB
SIO_010081: SJ05684_RS28995
subclass of: SO_0000673
so part of: SJ05684_RS28995
location: 335706..>336173
location: region:335706-336173:1
so has part: feature:335706-336173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335706-336173:1:exon

SJ05684_RS29000
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29000
so part of: sequence
location: 336261..336632
location: region:336261-336632:1
so has part: feature:336261-336632:1:exon
subclass of: SO_0000010

position:336261:1
position: 336261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336632:1
position: 336632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336261-336632:1:exon

SJ05684_RS29000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29000
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636077.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDRVEIVDTGRRRRFSKEMKLQIVAESYLEPGLCATTARRHGISRSQLYEWRRLARAWQLDVASPVGGFVPALLVPEVEPAAGSLPNAGRMEVVSANGRRVIVDRDVDVEALLRIMRGLEALR
SIO_010081: SJ05684_RS29000
subclass of: SO_0000673
so part of: SJ05684_RS29000
location: 336261..336632
location: region:336261-336632:1
so has part: feature:336261-336632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336261-336632:1:exon

SJ05684_RS29005
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS29005
old locus tag: SJ05684_a40510
so part of: sequence
location: 336644..336982
location: region:336644-336982:1
so has part: feature:336644-336982:1:exon
subclass of: SO_0000010

position:336644:1
position: 336644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336982:1
position: 336982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336644-336982:1:exon

SJ05684_RS29005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: tnpB
locus tag: SJ05684_RS29005
old locus tag: SJ05684_a40510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009465831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MGTGVKVWLSTGYTDMRCGFPSLALRVQEVLKRDPLSGHLFVFRGRRSDILKIIWHDGLGACLFTRRLEKGRFIWPNMEGGAVAISPAQLSYLLSGIDWRNPQETWRPTRVG
SIO_010081: SJ05684_RS29005
subclass of: SO_0000673
so part of: SJ05684_RS29005
location: 336644..336982
location: region:336644-336982:1
so has part: feature:336644-336982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336644-336982:1:exon

SJ05684_RS29010
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29010
old locus tag: SJ05684_a40520
so part of: sequence
location: 337028..338728
location: region:337028-338728:1
so has part: feature:337028-338728:1:exon
subclass of: SO_0000010

position:337028:1
position: 337028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338728:1
position: 338728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337028-338728:1:exon

SJ05684_RS29010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29010
old locus tag: SJ05684_a40520
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328351.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MTSKPVDLPADLASAYLALLSEREMLQAERDVVVAERDTVVAERDIAVAQAANAQAMLSDSEALIASLELAIEKLKRELRGRRSERTARLIDQMELQLEELVMAATEDEAAAQAAAAKTSSVRSFTRKRPVRKPWPEDIERERVVIDPPVTCACCGGSRLSKLGEDVTETLEEVPRRFKVIETVREKFTCRDCEAISQPPAPFHATPRGFIGPHLLATILFDKFGMHSPLNRQSTRFKCEGIELSTSTLADQVGYGTAALLPIFDLIEAHVFAAERLFGDDTTIPIQAKDKCTTGRIWTYVCDDRPYGGAAAPAAIYYASSDRRGEHPQKHLAGYGGILQSDCYNGFEPLSVAEKKAVPITFAFCHAHARRKFFELADIQKNARDRKRKGKPISPIALEAVQRYDALFEIEREINGLSAEERLAARQEKSKPLFDDMHEWLKRERAMLSKSSEAIEPIDYMLKRWDGFARFLEDGRICLTNNAAERALRGIALGRRNWTFAGSQRGADRAAIMLSVITTCRLNDVDPKAWLADVFARIADLPVSRLHELLPWQWKTHKGTAIAAAA
SIO_010081: SJ05684_RS29010
subclass of: SO_0000673
so part of: SJ05684_RS29010
location: 337028..338728
location: region:337028-338728:1
so has part: feature:337028-338728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337028-338728:1:exon

SJ05684_RS29015
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29015
old locus tag: SJ05684_a40530
so part of: sequence
location: complement(338709..338942)
location: region:338709-338942:-1
so has part: feature:338709-338942:-1:exon
subclass of: SO_0000010

position:338709:-1
position: 338709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338942:-1
position: 338942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338709-338942:-1:exon

SJ05684_RS29015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29015
old locus tag: SJ05684_a40530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018327668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6429 family protein
translation: MEIDEDKIDDAVLALLWLTLHNERCAWKGFDWATTDRLHKKGMIGDPVNKSKSLILTDEGLERSEALFRELFTRPPQ
SIO_010081: SJ05684_RS29015
subclass of: SO_0000673
so part of: SJ05684_RS29015
location: complement(338709..338942)
location: region:338709-338942:-1
so has part: feature:338709-338942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338709-338942:-1:exon

SJ05684_RS29020
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS29020
old locus tag: SJ05684_a40540
pseudo: true
so part of: sequence
location: <339001..339315
location: region:339001-339315:1
so has part: feature:339001-339315:1:exon
subclass of: SO_0000010

position:339001:1
position: 339001
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:339315:1
position: 339315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339001-339315:1:exon

SJ05684_RS29020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS29020
old locus tag: SJ05684_a40540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012708757.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISRsp2 family helper ATPase IstB
SIO_010081: SJ05684_RS29020
subclass of: SO_0000673
so part of: SJ05684_RS29020
location: <339001..339315
location: region:339001-339315:1
so has part: feature:339001-339315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339001-339315:1:exon

SJ05684_RS29025
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29025
so part of: sequence
location: complement(339938..340486)
location: region:339938-340486:-1
so has part: feature:339938-340486:-1:exon
subclass of: SO_0000010

position:339938:-1
position: 339938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340486:-1
position: 340486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339938-340486:-1:exon

SJ05684_RS29025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSHENRVAAPLLSFRLNLVLFAVLSVLPLGGCARWDNPVLSVKETSAPQLLGANQINAATRQRILRAVGEDAQERALRDDLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTPDNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLHHNLNLSLAFEGKSEQSTLPQSR
SIO_010081: SJ05684_RS29025
subclass of: SO_0000673
so part of: SJ05684_RS29025
location: complement(339938..340486)
location: region:339938-340486:-1
so has part: feature:339938-340486:-1:exon

WP_015633401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339938-340486:-1:exon

SJ05684_RS29030
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: sctV
locus tag: SJ05684_RS29030
old locus tag: SJ05684_a40560
so part of: sequence
location: complement(340503..342596)
location: region:340503-342596:-1
so has part: feature:340503-342596:-1:exon
subclass of: SO_0000010

position:340503:-1
position: 340503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342596:-1
position: 342596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340503-342596:-1:exon

SJ05684_RS29030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: sctV
locus tag: SJ05684_RS29030
old locus tag: SJ05684_a40560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875094.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctV
translation: MANALRKFTEYAPANPDLMVALMLLLAVSMMVMPIPVVAVDALIGFNMGLAVLLLMAALYVSTPLDFSSLPGVILISTVFRLALTVATTRLILAEGEAGSIIHTFGSFVISGNIVVGFVIFLVVTMVQFMVLAKGAERVAEVAARFTLDALPGKQMAIDAELRNGHIDADESRRRRAALEKESKLYGAMDGAMKFVKGDSIAGLVVICINMLGGISIGLLSKGMSFAQVLHHYTLLTIGDALISQIPALLLSITAATMVTRVTGASKLNLGEDIANQLTASTRALRLTACVLVAMGFVPGFPLPVFFMLAAVFAAASFVKGDVLDADKVDATTVTPAESQTRNVAAQPNPIGVFLAPSLTNAIDQVELRQHIARISQLVSADLGIIVPPIPVDVDQQLPESQFRIDVEGVPVEQDLINPAQLSLADDLKKIESSGIPFRHDPETHRIWVEQSHEPALKAAGIRHHSPSELLAMRVHATLTCHAPRLVGIQETRQLLGRMEQEYSDLVKEVLRTTPIPRIADVLRRLLGEGIPIRNTRLVLEALAEWSEREQNVALLTEHVRSGMKRQICHRYGRHGVLPAFVMERETEDVVRCAVRETAAGPYLALEDRQSEALLSQMRQVFSSTAPGQTRPIVLTSMDVRRFVRGFLTRNGIELAVLSYQDLASDFKIQPAGSIRLPPSNGTSGEPRSFRPSATTG
SIO_010081: SJ05684_RS29030
subclass of: SO_0000673
so part of: SJ05684_RS29030
location: complement(340503..342596)
location: region:340503-342596:-1
so has part: feature:340503-342596:-1:exon

WP_014857573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340503-342596:-1:exon

SJ05684_RS29035
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29035
so part of: sequence
location: complement(342785..343675)
location: region:342785-343675:-1
so has part: feature:342785-343675:-1:exon
subclass of: SO_0000010

position:342785:-1
position: 342785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343675:-1
position: 343675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342785-343675:-1:exon

SJ05684_RS29035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLEVEALAAGLSIEGNGNIAAGERVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVLALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGDAREPKLPDNRTDDETAFTAAKALQQEVDRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAPSAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAALPY
SIO_010081: SJ05684_RS29035
subclass of: SO_0000673
so part of: SJ05684_RS29035
location: complement(342785..343675)
location: region:342785-343675:-1
so has part: feature:342785-343675:-1:exon

WP_014857572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342785-343675:-1:exon

SJ05684_RS29045
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29045
so part of: sequence
location: complement(344068..344364)
location: region:344068-344364:-1
so has part: feature:344068-344364:-1:exon
subclass of: SO_0000010

position:344068:-1
position: 344068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344364:-1
position: 344364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344068-344364:-1:exon

SJ05684_RS29045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NopC
translation: MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQAAIQSEAFELALRSVALQLMNDAMADADEAMAETEEDA
SIO_010081: SJ05684_RS29045
subclass of: SO_0000673
so part of: SJ05684_RS29045
location: complement(344068..344364)
location: region:344068-344364:-1
so has part: feature:344068-344364:-1:exon

WP_010875097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344068-344364:-1:exon

SJ05684_RS29055
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nopP
locus tag: SJ05684_RS29055
so part of: sequence
location: complement(345066..345878)
location: region:345066-345878:-1
so has part: feature:345066-345878:-1:exon
subclass of: SO_0000010

position:345066:-1
position: 345066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345878:-1
position: 345878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345066-345878:-1:exon

SJ05684_RS29055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nopP
locus tag: SJ05684_RS29055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: effector protein NopP
translation: MYGRIDSSSDFHYTQSASKQTDAETQEFADTFARMHLDRSDSNGGSSRYTLDHEPPVVPIDLKTFRREIRKFHGKEITDIADNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSYQLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITSTVDLQVAHPLVENAGDILLEHQLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKDKPPLYLRKFEDAETAQCSTSCSYETYEDDFM
SIO_010081: SJ05684_RS29055
subclass of: SO_0000673
so part of: SJ05684_RS29055
location: complement(345066..345878)
location: region:345066-345878:-1
so has part: feature:345066-345878:-1:exon

WP_014857569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345066-345878:-1:exon

SJ05684_RS29065
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29065
old locus tag: SJ05684_a40590
so part of: sequence
location: complement(346674..347711)
location: region:346674-347711:-1
so has part: feature:346674-347711:-1:exon
subclass of: SO_0000010

position:346674:-1
position: 346674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347711:-1
position: 347711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346674-347711:-1:exon

SJ05684_RS29065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29065
old locus tag: SJ05684_a40590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857567.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MSDTSEEKSHGATPKKLSDARKRGQIPRSSDFVRAAATCAGLAYLWLRGSVIEDKCREALLLTDKLQNLPFNLAVRQALVLLVELTLATVGPLLSALFGAVILAALLANRGFVFSLEPMKPNFEKINPFQWLKRLGSARSAVEVGKTLFKVLVLGGTFSLFFLGLWKTMVYLPVCGMGCFGVVFTGAKQLIGIGAGALLIGGLIDLLLQRALFLREMRMTKTEIKRELKEQQGTPELKGERRRIRNEMASEPPLGVHRATLVYRGTAVLIGLRYVRGETGVPILVCRAEGEAASDMFREAQNLRLKIVDDHVLAHQLMSTTKLGTAIPMQYFEPIARALLAAGLA
SIO_010081: SJ05684_RS29065
subclass of: SO_0000673
so part of: SJ05684_RS29065
location: complement(346674..347711)
location: region:346674-347711:-1
so has part: feature:346674-347711:-1:exon

WP_014857567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346674-347711:-1:exon

SJ05684_RS29070
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: sctT
locus tag: SJ05684_RS29070
old locus tag: SJ05684_a40600
so part of: sequence
location: complement(347708..348526)
location: region:347708-348526:-1
so has part: feature:347708-348526:-1:exon
subclass of: SO_0000010

position:347708:-1
position: 347708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348526:-1
position: 348526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347708-348526:-1:exon

SJ05684_RS29070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: sctT
locus tag: SJ05684_RS29070
old locus tag: SJ05684_a40600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857566.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctT
translation: MYLSPAEIQILLHAAIELVAAAGLGAARALGIMLILPVFTRSQIGGLIRGCLAIAFGLPCLAHVSDGLQALDPETSLIQIPLLGLKEVFVGVLLGTFLGIPLWGLQAAGEFIDNQRGITSPSTQADPATSSQASAMGVFLGITAITIFVAAGGVEAVLSALYGSYSIWPVYRFQPTLSTQGAVELFGLLDHIMRTTLLVSGPVVFFLGLIDISMMMLRRFAPQFKSGQLSPPIKNIVFPIIMVTYATYLLEGIKLEITQADGTLGWLDKLLK
SIO_010081: SJ05684_RS29070
subclass of: SO_0000673
so part of: SJ05684_RS29070
location: complement(347708..348526)
location: region:347708-348526:-1
so has part: feature:347708-348526:-1:exon

WP_034859387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347708-348526:-1:exon

SJ05684_RS29075
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29075
old locus tag: SJ05684_a40610
so part of: sequence
location: complement(348535..348813)
location: region:348535-348813:-1
so has part: feature:348535-348813:-1:exon
subclass of: SO_0000010

position:348535:-1
position: 348535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348813:-1
position: 348813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348535-348813:-1:exon

SJ05684_RS29075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29075
old locus tag: SJ05684_a40610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857565.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscS/YscS/HrcS family type III secretion system export apparatus protein
translation: MITGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELADQIFTEFPAMTLGY
SIO_010081: SJ05684_RS29075
subclass of: SO_0000673
so part of: SJ05684_RS29075
location: complement(348535..348813)
location: region:348535-348813:-1
so has part: feature:348535-348813:-1:exon

WP_014857565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348535-348813:-1:exon

SJ05684_RS29080
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: sctR
locus tag: SJ05684_RS29080
so part of: sequence
location: complement(348810..349478)
location: region:348810-349478:-1
so has part: feature:348810-349478:-1:exon
subclass of: SO_0000010

position:348810:-1
position: 348810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349478:-1
position: 349478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348810-349478:-1:exon

SJ05684_RS29080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: sctR
locus tag: SJ05684_RS29080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857564.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctR
translation: MTEMQPAILALLAITAALGLLVLAVVTTTAFVKVSVVLFLVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAAKAGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAFEIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSYTMPGAL
SIO_010081: SJ05684_RS29080
subclass of: SO_0000673
so part of: SJ05684_RS29080
location: complement(348810..349478)
location: region:348810-349478:-1
so has part: feature:348810-349478:-1:exon

WP_014857564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348810-349478:-1:exon

SJ05684_RS29085
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: sctQ
locus tag: SJ05684_RS29085
old locus tag: SJ05684_a40630
so part of: sequence
location: complement(349471..350526)
location: region:349471-350526:-1
so has part: feature:349471-350526:-1:exon
subclass of: SO_0000010

position:349471:-1
position: 349471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350526:-1
position: 350526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349471-350526:-1:exon

SJ05684_RS29085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: sctQ
locus tag: SJ05684_RS29085
old locus tag: SJ05684_a40630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875103.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system cytoplasmic ring protein SctQ
translation: MTGVARRTIFEPALTLSPEVVAWINDIAASRGPFQSRVGDKPLSVSMEGLVWQHESSAIPMFDCIWDLGGETVVLSLSRPLVEALVSTVQSGLAFPTEPTASLILELALEPLIARLEDKTNRTLHLLRVGKAITLAPYVELEIVFGSVSGKGRLSLFSPLDGLVPFAFRALAELLGQLPRQPRELSPDLPVIIAGEIGTLRASAALLRKASVGDALLPDISPFGRGQIALSVGQLWTRADLEGDHLVLRGPFRPQSRPLEYAHMTETESQLRPSDADLDDIEIVLVFECGRWPISLGDLRSAGDGHVFELGRPIDGLVDIVANGRCIGRGDIVRIGDELGIRLRGRLACND
SIO_010081: SJ05684_RS29085
subclass of: SO_0000673
so part of: SJ05684_RS29085
location: complement(349471..350526)
location: region:349471-350526:-1
so has part: feature:349471-350526:-1:exon

WP_034859390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349471-350526:-1:exon

SJ05684_RS29090
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29090
so part of: sequence
location: complement(350573..351109)
location: region:350573-351109:-1
so has part: feature:350573-351109:-1:exon
subclass of: SO_0000010

position:350573:-1
position: 350573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351109:-1
position: 351109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350573-351109:-1:exon

SJ05684_RS29090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVAFDLVNYAYASRLRLLKEMRERDARRKLSKKEAQHHMAIVAAQNASRELEIAQQQRAGKEAQLYQELTSLNTLSSAALDHHHLHIERLAAEITIRGQVLDDARIAQEQAETAASEAKALLVKRSEARHKWQQIQDDLRRAVDILSEAAGEIEADDEILLRYGRGSLAQRSRNEFR
SIO_010081: SJ05684_RS29090
subclass of: SO_0000673
so part of: SJ05684_RS29090
location: complement(350573..351109)
location: region:350573-351109:-1
so has part: feature:350573-351109:-1:exon

WP_014857562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350573-351109:-1:exon

SJ05684_RS29095
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: sctN
locus tag: SJ05684_RS29095
old locus tag: SJ05684_a40670
so part of: sequence
location: complement(351085..352440)
location: region:351085-352440:-1
so has part: feature:351085-352440:-1:exon
subclass of: SO_0000010

position:351085:-1
position: 351085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352440:-1
position: 352440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351085-352440:-1:exon

SJ05684_RS29095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: sctN
locus tag: SJ05684_RS29095
old locus tag: SJ05684_a40670
function: Flagellar biosynthesis/type III secretory pathway ATPase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875105.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO function: GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system ATPase SctN
translation: MITPVPQHNSLEGTPLEPAISSLWSTAKRIDTRVVRGRITRAVGTLIHAVLPEARIGELCLLQDTRTGLSLEAEVIGLLDNGVLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAADVVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGMGERGSITAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVSDFEETVGWMSRLTS
SIO_010081: SJ05684_RS29095
subclass of: SO_0000673
so part of: SJ05684_RS29095
location: complement(351085..352440)
location: region:351085-352440:-1
so has part: feature:351085-352440:-1:exon

WP_015633405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351085-352440:-1:exon

SJ05684_RS29100
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolV
locus tag: SJ05684_RS29100
so part of: sequence
location: complement(352437..353063)
location: region:352437-353063:-1
so has part: feature:352437-353063:-1:exon
subclass of: SO_0000010

position:352437:-1
position: 352437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353063:-1
position: 353063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352437-353063:-1:exon

SJ05684_RS29100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolV
locus tag: SJ05684_RS29100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolV
translation: MTADISAAPVAPQMRPLGPLIPASELNIWHSAGDALAAAKRHQQRVRTWARAAYQRERARGYAEGLNTGAEEMSGLIARAVTEVAQRKAVLEKELPQLVIEILSDLLGAFNPGELLVRAVRHAIERRYNGAEEVCLHVCATQVDMLAREFAGCDGREKRPKVRIETDPTLSPQECVLWSEYGNVALGLDAQMRALRLGFEYLSEEGEL
SIO_010081: SJ05684_RS29100
subclass of: SO_0000673
so part of: SJ05684_RS29100
location: complement(352437..353063)
location: region:352437-353063:-1
so has part: feature:352437-353063:-1:exon

WP_014857560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352437-353063:-1:exon

SJ05684_RS29105
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolU
locus tag: SJ05684_RS29105
so part of: sequence
location: complement(353065..353703)
location: region:353065-353703:-1
so has part: feature:353065-353703:-1:exon
subclass of: SO_0000010

position:353065:-1
position: 353065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353703:-1
position: 353703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353065-353703:-1:exon

SJ05684_RS29105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolU
locus tag: SJ05684_RS29105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolU
translation: MKLPMPIAIQNTQPDVSFQSHSVPRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQPRLAELLLGNDMDWNRIGWGPDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVERIGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACLGAWLNIRPALERNRVLLRLPLGTAAENPAPEHDGASSGLFSLVIAHFEMESP
SIO_010081: SJ05684_RS29105
subclass of: SO_0000673
so part of: SJ05684_RS29105
location: complement(353065..353703)
location: region:353065-353703:-1
so has part: feature:353065-353703:-1:exon

WP_015633406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353065-353703:-1:exon

SJ05684_RS29110
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolT
locus tag: SJ05684_RS29110
old locus tag: SJ05684_a40690
so part of: sequence
location: complement(353700..354569)
location: region:353700-354569:-1
so has part: feature:353700-354569:-1:exon
subclass of: SO_0000010

position:353700:-1
position: 353700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354569:-1
position: 354569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353700-354569:-1:exon

SJ05684_RS29110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolT
locus tag: SJ05684_RS29110
old locus tag: SJ05684_a40690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolT
translation: MFGSAHGDTTSSDTSGRRPLRLVVLPLLLALSSCKVDLYTQLQEREANEMLALLMDNGVDAVRVAGKDGTSTIQVDEKLLAFSIKLLNGKGLPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSHTISDIDGVFSARVHVVLPHNDLLRAGDTPSSASVFIRHDAKTNLPALLPKIKMLVAESIEGLAYDKVEVVLVPVERSAQEQRSLLEPDLAQASRPIPVPLLAVAVGVGAAVFAVTCYLLFIVLGHRRRQLTGELSRVQERPGVSALAAIRKKIPALGRR
SIO_010081: SJ05684_RS29110
subclass of: SO_0000673
so part of: SJ05684_RS29110
location: complement(353700..354569)
location: region:353700-354569:-1
so has part: feature:353700-354569:-1:exon

WP_014857558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353700-354569:-1:exon

SJ05684_RS29115
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolB
locus tag: SJ05684_RS29115
so part of: sequence
location: complement(354579..355073)
location: region:354579-355073:-1
so has part: feature:354579-355073:-1:exon
subclass of: SO_0000010

position:354579:-1
position: 354579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355073:-1
position: 355073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354579-355073:-1:exon

SJ05684_RS29115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolB
locus tag: SJ05684_RS29115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolB
translation: MMLPVTSISNSLPRVASSSFGEQAQFERALAQAADSMKNDTASTPVRTAPISPPMDVHRAAPTSPLKDRVLQTISAICPDSIVAAAAPNHKAALISGAPPGPSQKLPVEDGAGTERLGIPQGGHDFDVMVAGLRDLYNGVTQVALVSKGISGITSSVNKLLKEG
SIO_010081: SJ05684_RS29115
subclass of: SO_0000673
so part of: SJ05684_RS29115
location: complement(354579..355073)
location: region:354579-355073:-1
so has part: feature:354579-355073:-1:exon

WP_014857557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354579-355073:-1:exon

SJ05684_RS29120
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nolW
locus tag: SJ05684_RS29120
old locus tag: SJ05684_a40700
so part of: sequence
location: 355229..355933
location: region:355229-355933:1
so has part: feature:355229-355933:1:exon
subclass of: SO_0000010

position:355229:1
position: 355229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355933:1
position: 355933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355229-355933:1:exon

SJ05684_RS29120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nolW
locus tag: SJ05684_RS29120
old locus tag: SJ05684_a40700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolW
translation: MPTTPIPFTPLHMFRRLLCVGLFLFAGIHTTLGATLPLPSTSYKYTVLDQDLSAALQEFGNNLKISVNISAEVKGRIRGRIPELSPREFLDRLTDLYDLQWYYDGVVLYVSAAKEAQTRMLVLSSVHFSAFKLALDKLDISDERYPVRPAPGNGLVLVSGPPRFIALIEQTLNGLLAVAQAQPRATDTPARESVMVLFRGSSTTVVRGGRPEVFYTSEMLPENDDGGKAELSKK
SIO_010081: SJ05684_RS29120
subclass of: SO_0000673
so part of: SJ05684_RS29120
location: 355229..355933
location: region:355229-355933:1
so has part: feature:355229-355933:1:exon

WP_032490256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355229-355933:1:exon

SJ05684_RS29125
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
alternative label: nolX
gene: nopX
locus tag: SJ05684_RS29125
old locus tag: SJ05684_a40710
gene synonym: nolX
so part of: sequence
location: 356215..358005
location: region:356215-358005:1
so has part: feature:356215-358005:1:exon
subclass of: SO_0000010

position:356215:1
position: 356215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358005:1
position: 358005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356215-358005:1:exon

SJ05684_RS29125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
alternative label: nolX
gene: nopX
locus tag: SJ05684_RS29125
old locus tag: SJ05684_a40710
gene synonym: nolX
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system effector nodulation protein NopX
translation: MSASNLLPMISSNPAQFAQASLAKAFAPRVAQGQQSVLSFEAMLSTNMLDRIGPLASREDLLPPDAESTLEDLQKDPLALLPPHMRAAIESMDQTPQSAVAIDDHYVAPAPIQSSRITWNGGSLTKPELQIVAVLNRHKDLCPLSWESLEAKVNDPSTPPDLKAAIEALLQDPELFYAIGSQGDGRCGGKITAKDLSEFSKHHPQVAAFQESQAQSYAQNYIPSDSAENAQPSVMTENDALRELYRYSEYLPKNLSLADFKQIVDGEAKTGKCPPQVIAAAQYFVSHPEEWKRLYGGNIDKVHKEDFLQVASSSMSLTQAELDTLKTINSHQELFFGSGDLTRDKLASMADDKSLDPKVREAASQLLSDPLLFGLLNNAITGYKTHHGFFDFGGGHTVDSGNVSKEDFGRFYTNMTTANRTVQQPKFHVPETEAAQNAVADMKMGLADQPDIKSPKKNGGALMHVVDSVLRVGSKVLDWAATAVGVLSFIPGIGQVADLVSMTLACEAQAANLLRTAITGGNMKQALIEAGIGVAAQAVGLVSGPGVKLAIRNGLARKAIEEAATAGINLPLSMAQHYAEGYLNDLKARLTADHPA
SIO_010081: SJ05684_RS29125
subclass of: SO_0000673
so part of: SJ05684_RS29125
location: 356215..358005
location: region:356215-358005:1
so has part: feature:356215-358005:1:exon

WP_014857555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356215-358005:1:exon

SJ05684_RS29130
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29130
old locus tag: SJ05684_a40720
so part of: sequence
location: 358190..358618
location: region:358190-358618:1
so has part: feature:358190-358618:1:exon
subclass of: SO_0000010

position:358190:1
position: 358190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358618:1
position: 358618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358190-358618:1:exon

SJ05684_RS29130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29130
old locus tag: SJ05684_a40720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MEHCPLSAAQLIPTEEVNPDRVDALQAQILQTGSWTVPITAEKDALFVIDDYHRLTAAHRLRLTRMPVLLLDNDSVRVESWRPGGNITPAEIFAMARSGRKFPYKTTRHVFAHGLPTCDVPLELLSSPTPMDMAPVFSAGAL
SIO_010081: SJ05684_RS29130
subclass of: SO_0000673
so part of: SJ05684_RS29130
location: 358190..358618
location: region:358190-358618:1
so has part: feature:358190-358618:1:exon

WP_014857553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358190-358618:1:exon

SJ05684_RS29135
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29135
old locus tag: SJ05684_a40730
pseudo: true
so part of: sequence
location: 358618..359969
location: region:358618-359969:1
so has part: feature:358618-359969:1:exon
subclass of: SO_0000010

position:359969:1
position: 359969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358618-359969:1:exon

SJ05684_RS29135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29135
old locus tag: SJ05684_a40730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875113.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Y4yA family PLP-dependent enzyme
SIO_010081: SJ05684_RS29135
subclass of: SO_0000673
so part of: SJ05684_RS29135
location: 358618..359969
location: region:358618-359969:1
so has part: feature:358618-359969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358618-359969:1:exon

SJ05684_RS29140
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29140
old locus tag: SJ05684_a40750
so part of: sequence
location: 359970..360980
location: region:359970-360980:1
so has part: feature:359970-360980:1:exon
subclass of: SO_0000010

position:359970:1
position: 359970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360980:1
position: 360980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359970-360980:1:exon

SJ05684_RS29140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29140
old locus tag: SJ05684_a40750
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014763148.1
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
GO process: GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine synthase family protein
translation: MLHTTVTQLIGQTPVMSIDVPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALEDGRLAPGGTIVESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRMMRALGAEIRYVEGDFREDEVAVVERQRLAAQLGAQLPGALFMNQSDNPANPAGYTGLVDELVAQLPDGIDAFVGCVGTGGSMTGISQRVKRNNPAVRTIAVEPAGSIVFGKPGHPYYQSGTGTPAGDEVGKVLDYGCIDEGVQVTDTQAFETARYIARRKGLLVGGSTGGAIYKALEFIGAGKLTGTVVTTVADGGEKYLGTIFDEEWMAKRRLLDPAIAAQLDGWLFGKARAA
SIO_010081: SJ05684_RS29140
subclass of: SO_0000673
so part of: SJ05684_RS29140
location: 359970..360980
location: region:359970-360980:1
so has part: feature:359970-360980:1:exon

WP_014857550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359970-360980:1:exon

SJ05684_RS29145
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29145
old locus tag: SJ05684_a40760
so part of: sequence
location: 360977..362116
location: region:360977-362116:1
so has part: feature:360977-362116:1:exon
subclass of: SO_0000010

position:360977:1
position: 360977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362116:1
position: 362116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360977-362116:1:exon

SJ05684_RS29145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29145
old locus tag: SJ05684_a40760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD/NADP octopine/nopaline dehydrogenase family protein
translation: MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGGDLWQAVTRDGRTLSARPDYSGTDPSAALDNADMVLITQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAAKVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELFVALDRRESAASAAALMAMLNRIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGAELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYAGIPAPLVPNPHGPGLVIDRGSRAFHEDIAFGQALLVTMAERLEATVPAIAKTYRWACDYHGKLAAGTPDYVPADWPEAA
SIO_010081: SJ05684_RS29145
subclass of: SO_0000673
so part of: SJ05684_RS29145
location: 360977..362116
location: region:360977-362116:1
so has part: feature:360977-362116:1:exon

WP_014857549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360977-362116:1:exon

SJ05684_RS29150
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29150
old locus tag: SJ05684_a40770
so part of: sequence
location: 362116..364002
location: region:362116-364002:1
so has part: feature:362116-364002:1:exon
subclass of: SO_0000010

position:364002:1
position: 364002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362116-364002:1:exon

SJ05684_RS29150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29150
old locus tag: SJ05684_a40770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857548.1
GO process: GO:0019290 - siderophore biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IucA/IucC family protein
translation: MDEKTPSVTNPVENEDLALLTQASRNAINRLVRCLFAERLLAPNALLWAREGRQAWFPLWPSQRMLHFTDLSLAPAGTLRNRGQIEVLDGTGARQRIDDPAALMREVAPSLAITPASDGLEHLLRDVDNSMRNDMLARRERGRWSARLRQEIAEAGAPGFLAYLERSLPTHLAAMTLDQWGALEGHPFYPTWKAKPGLAAEEVAALSPEFGARVPLRIAALRSSWAYVEKMPHVGSYSEWFAENFPDLSRDWAEGLKARGQSPEDWLPLPVHAWHLEHFVRREFAAEIEAGIFDPDGPEIVTLPSMSFRTMLPKTEAPRPFIKLPVAIWMTSEQRTLQAKSIHMGPRLSTLISDIVSEEDDLRCRLEILTEELGAILRHPETGDEHLGRFLWVVYRKADALARRDGLLPVTVAALLTAGPVDGRPLICELIGKSGDESEAAIAVFFRLYARTVVRPTLAMYLLYGIAFEAHQQNSTVLFDDRGLPRKLLIRDFGDGRSFAPLFTERGYELQPFSRGGILPTTFDDDISLVRSFLINACFVCHLHEIALCLTEQYSVAGDSLWRVLREETEEAFETLRPRMLSDAFWLEERQAFLERPWPARSVLRMHLERYRDYRIEHQLPNPLASAE
SIO_010081: SJ05684_RS29150
subclass of: SO_0000673
so part of: SJ05684_RS29150
location: 362116..364002
location: region:362116-364002:1
so has part: feature:362116-364002:1:exon

WP_014857548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362116-364002:1:exon

SJ05684_RS29155
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29155
old locus tag: SJ05684_a40780
so part of: sequence
location: 363999..365213
location: region:363999-365213:1
so has part: feature:363999-365213:1:exon
subclass of: SO_0000010

position:363999:1
position: 363999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365213:1
position: 365213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363999-365213:1:exon

SJ05684_RS29155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29155
old locus tag: SJ05684_a40780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857547.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTRTVAVLRGFGPDFALLFGLQFISMGAMEMNGPFWPIQIKALSPSDSVFGLAGIGVYVCPMLGVSLTSAFWGRMGDRYGNRLMMVRALLGLAITQLLVAFAQDVWTILALRFLQGACAGYIAPAQAYGVEVTGGRDRARLFAWLQVATNVGSLGGAFLGGLILDALPFAAVNLTAGVICAFCAAVAWTSLPVPPGGAGLTKTAKATTVSCAPSTGVSVFGLLALMGLLLASRMVLQVPFSLYMSEVYGSQHWITGLSYGLLALGFVVAAPVWARTFEGREPSFVLGCNVLIAGGCFVATGLAGSTRAIGLYAALYFAWGALLGGTTPVLLSLVSAATRSERQGSVLGLAQTCQQGASVVGIIAGVAATQRFGLKAAFPLVTGLYGLSFLVALGLWLKARQSRR
SIO_010081: SJ05684_RS29155
subclass of: SO_0000673
so part of: SJ05684_RS29155
location: 363999..365213
location: region:363999-365213:1
so has part: feature:363999-365213:1:exon

WP_014857547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363999-365213:1:exon

SJ05684_RS29160
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nopL
locus tag: SJ05684_RS29160
so part of: sequence
location: 365471..366487
location: region:365471-366487:1
so has part: feature:365471-366487:1:exon
subclass of: SO_0000010

position:365471:1
position: 365471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366487:1
position: 366487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365471-366487:1:exon

SJ05684_RS29160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nopL
locus tag: SJ05684_RS29160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system effector nodulation protein NopL
translation: MDINSTRPLNASPQPDSPPPANESAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTGHPYSQYLDSAYPYPSPCEWQHDLYTRTRERSPHPSEQRPHARVLQDAPEHDQDQHVEAAGPRAGSWQVGPSRSGPSQAGPSSSATPLNASPPPHATDLETEHPYSQYLDWANPSLLDWQHDLHTRATASPAPLTAERGKSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPSHSGPSQARPSHAWPSSSAGAEPTELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGLMPTAEVPTTTFLMMGMPHVAEFRGEGVIRIRPSLDFDI
SIO_010081: SJ05684_RS29160
subclass of: SO_0000673
so part of: SJ05684_RS29160
location: 365471..366487
location: region:365471-366487:1
so has part: feature:365471-366487:1:exon

WP_014857546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365471-366487:1:exon

SJ05684_RS29165
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29165
old locus tag: SJ05684_a40790
so part of: sequence
location: complement(367037..368059)
location: region:367037-368059:-1
so has part: feature:367037-368059:-1:exon
subclass of: SO_0000010

position:367037:-1
position: 367037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368059:-1
position: 368059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367037-368059:-1:exon

SJ05684_RS29165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29165
old locus tag: SJ05684_a40790
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971054.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQITTVGLDLAKSVFQAHGVDETGATVLVKRLHRKQMLPFFSKLPPCLIGMEACGTAHHWARTLAAMGHEVRLIPPSYVKPYVKRGKSDALDAEAICEAVQRPTMRFVPVKTVAQQSILMTHRARSLLVRQRTMVANALRAHLAELGLVANPGIANLAKLAQQALSGESSLPSYARTTLDILIRQILVFADEIAALDQQLLAWHADSEASRRLSAIPGLGIVTATAVAATVTDPEQFRSGRQFAAWLGLTPQQCSTGGKTQLGGISKQGDRYLRRLLVVGATAVIRHTKDKATPLANWIRKLLEKKPFRLVSVALANKLARIAWVVLTRKEAYRAHEMIA
SIO_010081: SJ05684_RS29165
subclass of: SO_0000673
so part of: SJ05684_RS29165
location: complement(367037..368059)
location: region:367037-368059:-1
so has part: feature:367037-368059:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367037-368059:-1:exon

SJ05684_RS29175
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29175
so part of: sequence
location: complement(368278..368844)
location: region:368278-368844:-1
so has part: feature:368278-368844:-1:exon
subclass of: SO_0000010

position:368278:-1
position: 368278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368844:-1
position: 368844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368278-368844:-1:exon

SJ05684_RS29175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29175
inference: COORDINATES: protein motif:HMM:TIGR02522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpaD family pilus assembly lipoprotein
translation: MTLRIIAHLLALTASLAGCTSTAPIYVEQSTPIFVRQESTVLKLESLHASEQQRLLAFLWKASRGRRDALHLVISGSSRLSAEAVHQARQMGIGASNIHLLDQNDRGQLRVEAVVYHALPPICRSLSSQLLNDEFFDQPIGCSTSHNLAVMINDPRDLLGNRFVKPSDGDRAAIPVTTYRTSTGKGGL
SIO_010081: SJ05684_RS29175
subclass of: SO_0000673
so part of: SJ05684_RS29175
location: complement(368278..368844)
location: region:368278-368844:-1
so has part: feature:368278-368844:-1:exon

WP_014857545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368278-368844:-1:exon

SJ05684_RS29180
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29180
old locus tag: SJ05684_a40800
so part of: sequence
location: complement(368854..370281)
location: region:368854-370281:-1
so has part: feature:368854-370281:-1:exon
subclass of: SO_0000010

position:368854:-1
position: 368854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370281:-1
position: 370281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368854-370281:-1:exon

SJ05684_RS29180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29180
old locus tag: SJ05684_a40800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II and III secretion system protein family protein
translation: MKATPTGHASADRWPTPIVGSRPTVPYWSNLLYALVLLSPMSAAAENNGDEAVPRAAPNSINATLNLSSSLGKTVHLPAPAATIFVADPTIADYQAPSNRTIFVFGKKFGRTSLFALDENGEALAELHVVVTQPIGDLRAMLRDQVGDYPIHVSYTPRGAILSGTAPNAEVVDIAKRVTEQFLGDGAPIVNNIKVAGSLQVNLSVRVAEVSRSGLKALGINLSAFGQFGNFKVGVLNRGAGLGSATGSGGTAEIGFDNDAVSVGAVLDALAKEHIASVLAEPNLTAMSGETASFLAGGEFPIPVLQENGQTSVEFRRFGVSLEFVPTVLDNNLINIHVKPEVSELSLQGAVQVNGIAVPAVSTRRADTVVELASGQSFVIGGLIRRNVNNDISAFPWLGRIPILGALFRSSSFQKEESELVILVTPYIVRPGSNPNQMSAPTDRMAPALGTPPRARAAISTDAPSVKGDLGFIIE
SIO_010081: SJ05684_RS29180
subclass of: SO_0000673
so part of: SJ05684_RS29180
location: complement(368854..370281)
location: region:368854-370281:-1
so has part: feature:368854-370281:-1:exon

WP_034859716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368854-370281:-1:exon

SJ05684_RS29185
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29185
old locus tag: SJ05684_a40810
so part of: sequence
location: complement(370305..370985)
location: region:370305-370985:-1
so has part: feature:370305-370985:-1:exon
subclass of: SO_0000010

position:370305:-1
position: 370305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370985:-1
position: 370985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370305-370985:-1:exon

SJ05684_RS29185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29185
old locus tag: SJ05684_a40810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875121.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDWLRQLRSDGYSVPAVIMSRLDDLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQITCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLLNRAGRIVPRARLEDQLYSFNDEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYVLELTDASSA
SIO_010081: SJ05684_RS29185
subclass of: SO_0000673
so part of: SJ05684_RS29185
location: complement(370305..370985)
location: region:370305-370985:-1
so has part: feature:370305-370985:-1:exon

WP_014857543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370305-370985:-1:exon

SJ05684_RS29195
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nodD2
locus tag: SJ05684_RS29195
old locus tag: SJ05684_a40830
so part of: sequence
location: 372680..373618
location: region:372680-373618:1
so has part: feature:372680-373618:1:exon
subclass of: SO_0000010

position:372680:1
position: 372680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373618:1
position: 373618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372680-373618:1:exon

SJ05684_RS29195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nodD2
locus tag: SJ05684_RS29195
old locus tag: SJ05684_a40830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NodD2
translation: MRFKGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSAAIARLRTYFGDDLFTMRGRELIPTPRAIALAPAVRDALLHIQFSIISWDMFNPVQSQRRFRIRLSDVIMLVFFERVVKRLAREAPGIGFELLPLTEDPDELLRYGDVDFVILPELFASSDHPKAKLLDDTLVCVGCPTNKQLKRQLSFENYGSMGHIAAKFGRTLKPSIENWLLLEHGLKRRIEVVVPGFSLIPPLLSGTDRIATMPLRLVEHFAKTTPLRVAELPLALPPFAQAVQWPSLHNRDQASIWMRQVLLQEALHMTTPRDSVEYRP
SIO_010081: SJ05684_RS29195
subclass of: SO_0000673
so part of: SJ05684_RS29195
location: 372680..373618
location: region:372680-373618:1
so has part: feature:372680-373618:1:exon

WP_014857540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372680-373618:1:exon

SJ05684_RS29205
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29205
old locus tag: SJ05684_a40840
pseudo: true
so part of: sequence
location: 373917..>374555
location: region:373917-374555:1
so has part: feature:373917-374555:1:exon
subclass of: SO_0000010

position:373917:1
position: 373917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374555:1
position: 374555
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373917-374555:1:exon

SJ05684_RS29205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29205
old locus tag: SJ05684_a40840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601684.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SJ05684_RS29205
subclass of: SO_0000673
so part of: SJ05684_RS29205
location: 373917..>374555
location: region:373917-374555:1
so has part: feature:373917-374555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373917-374555:1:exon

SJ05684_RS29210
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29210
old locus tag: SJ05684_a40850
so part of: sequence
location: complement(374563..375752)
location: region:374563-375752:-1
so has part: feature:374563-375752:-1:exon
subclass of: SO_0000010

position:374563:-1
position: 374563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375752:-1
position: 375752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374563-375752:-1:exon

SJ05684_RS29210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29210
old locus tag: SJ05684_a40850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MKRNRFTDEQIIGILKEHEAGTPVSELCRKHGVSDASIYKWKAKFGGMDVSEAKRLKTLEDENAKLKRLLADAMLDNAALKDLFGKEVVTPAAKRSAVAHLMSQHGMSERRACKAIGFCRMTIRYETRRSDDHGLRERMKALAHERRRFGYRRIHVLLRREGHLVNHKKLFRLYREEKLTVRKRGGRKRAIGTRAPMLIPMTANDRWSLDFVSDQLTDGRRFRILTVVDDCTRECLGLIADTSLSGLRVARELDRIIQARGKPRMIVSDNGSEFTSNAILQWTDRGKVDWHYIAPGKPIQNAFIESFNGRLRDEFLNETLFSSLSHARSALLNWRSDYNDCRPHSGLGWLTPAEFAQTINPRRDAVLRSRNGSAPQPAATAPNTATKNRWSELKIG
SIO_010081: SJ05684_RS29210
subclass of: SO_0000673
so part of: SJ05684_RS29210
location: complement(join(374563..375503,375503..375752))
location: region:374563-375752:-1
so has part: feature:375503-375752:-1:exon
so has part: feature:374563-375503:-1:exon

WP_086018076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375503-375752:-1:exon

position:375503:-1
position: 375503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374563-375503:-1:exon

SJ05684_RS29215
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29215
old locus tag: SJ05684_a40870
pseudo: true
so part of: sequence
location: <375817..376728
location: region:375817-376728:1
so has part: feature:375817-376728:1:exon
subclass of: SO_0000010

position:375817:1
position: 375817
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:376728:1
position: 376728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375817-376728:1:exon

SJ05684_RS29215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29215
old locus tag: SJ05684_a40870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601684.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SJ05684_RS29215
subclass of: SO_0000673
so part of: SJ05684_RS29215
location: <375817..376728
location: region:375817-376728:1
so has part: feature:375817-376728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375817-376728:1:exon

SJ05684_RS29220
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS29220
old locus tag: SJ05684_a40880
so part of: sequence
location: 376743..377486
location: region:376743-377486:1
so has part: feature:376743-377486:1:exon
subclass of: SO_0000010

position:376743:1
position: 376743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377486:1
position: 377486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376743-377486:1:exon

SJ05684_RS29220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: istB
locus tag: SJ05684_RS29220
old locus tag: SJ05684_a40880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537795.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLTNPTIDMLRELGLTGMASAYQELEAQPEARHLEHGEWLALLLEREATTRRQKRFEARARAARLRHDAQIENIDFRAARGLDRNLVLKLANCDWIRQHHSLLLIGPAGVGKSWLACALGHKACREDFSVAYHRLPRLFATLALARGDGRYPKVLKALARTDLLILDDWGPEKLNDEQRRDLLEIVEDRYEKRSTIVTSQVPVDHWYDMIGNPTIADAILDRLVHNAYRIELHGESLRKQRQTPSAA
SIO_010081: SJ05684_RS29220
subclass of: SO_0000673
so part of: SJ05684_RS29220
location: 376743..377486
location: region:376743-377486:1
so has part: feature:376743-377486:1:exon

WP_014857536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376743-377486:1:exon

SJ05684_RS29225
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29225
pseudo: true
so part of: sequence
location: complement(377645..378655)
location: region:377645-378655:-1
so has part: feature:377645-378655:-1:exon
subclass of: SO_0000010

position:377645:-1
position: 377645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378655:-1
position: 378655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377645-378655:-1:exon

SJ05684_RS29225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29225
inference: COORDINATES: protein motif:HMM:NF016693.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tryptophan 7-halogenase
SIO_010081: SJ05684_RS29225
subclass of: SO_0000673
so part of: SJ05684_RS29225
location: complement(377645..378655)
location: region:377645-378655:-1
so has part: feature:377645-378655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377645-378655:-1:exon

SJ05684_RS29230
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29230
old locus tag: SJ05684_a40900
so part of: sequence
location: complement(378648..379481)
location: region:378648-379481:-1
so has part: feature:378648-379481:-1:exon
subclass of: SO_0000010

position:378648:-1
position: 378648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379481:-1
position: 379481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378648-379481:-1:exon

SJ05684_RS29230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29230
old locus tag: SJ05684_a40900
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MGWTDFTRRQYARRARRYASDLTDREWGLISPCLPGPRRLGRPRSTDLREVVNALLYIATTGCQWRMMPKDFPPFTTVQSYFYEWRATGLWGRINHHLVMEARELEGREASPSAGVIDSQSVKTTESGGISGYDAGKKIKGRKRHIVVDTLGLMVGLRVHSADIQDRDGAPAVLKTILKRWPWLRHIFADGGYAGPKLKGALQKIAAFTLQIVKRTDKAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWITIAHIRVLTRRLARYGYC
SIO_010081: SJ05684_RS29230
subclass of: SO_0000673
so part of: SJ05684_RS29230
location: complement(378648..379481)
location: region:378648-379481:-1
so has part: feature:378648-379481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378648-379481:-1:exon

SJ05684_RS29235
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29235
old locus tag: SJ05684_a40910
so part of: sequence
location: complement(379552..380085)
location: region:379552-380085:-1
so has part: feature:379552-380085:-1:exon
subclass of: SO_0000010

position:379552:-1
position: 379552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380085:-1
position: 380085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379552-380085:-1:exon

SJ05684_RS29235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29235
old locus tag: SJ05684_a40910
inference: COORDINATES: protein motif:HMM:NF016693.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan 7-halogenase
translation: MLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLIDTLCRNELDLDVFIGEAGATHKLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPLLSARIAAGENLHTCIPGFELIIKKASQVEIDELLATGESGLYPSFHFNHAGFERYLRA
SIO_010081: SJ05684_RS29235
subclass of: SO_0000673
so part of: SJ05684_RS29235
location: complement(379552..380085)
location: region:379552-380085:-1
so has part: feature:379552-380085:-1:exon

WP_014857533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379552-380085:-1:exon

SJ05684_RS30890
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30890
so part of: sequence
location: complement(380515..380874)
location: region:380515-380874:-1
so has part: feature:380515-380874:-1:exon
subclass of: SO_0000010

position:380515:-1
position: 380515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380874:-1
position: 380874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380515-380874:-1:exon

SJ05684_RS30890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30890
inference: COORDINATES: protein motif:HMM:NF022540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exopolysaccharide production repressor protein
translation: MLRPTTLPHDPTNKTRKTALSFGIFHRILWLFLCANTLIVYLVTGSISDAVVTTVVGSLLLQLAYFGHVLFLLWRAHCARRARQTTGQFHGEGQPGDPRIAGTHGRTDGDPCFEDEDSR
SIO_010081: SJ05684_RS30890
subclass of: SO_0000673
so part of: SJ05684_RS30890
location: complement(380515..380874)
location: region:380515-380874:-1
so has part: feature:380515-380874:-1:exon

WP_234818765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380515-380874:-1:exon

SJ05684_RS29245
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29245
old locus tag: SJ05684_a40920
so part of: sequence
location: complement(380950..381126)
location: region:380950-381126:-1
so has part: feature:380950-381126:-1:exon
subclass of: SO_0000010

position:380950:-1
position: 380950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381126:-1
position: 381126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380950-381126:-1:exon

SJ05684_RS29245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29245
old locus tag: SJ05684_a40920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSSFVTRRFSWCRNIYYASAAAADSGREVCTFTGSMTQVKFSVFCDAEDDHSSNQIM
SIO_010081: SJ05684_RS29245
subclass of: SO_0000673
so part of: SJ05684_RS29245
location: complement(380950..381126)
location: region:380950-381126:-1
so has part: feature:380950-381126:-1:exon

WP_010875125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380950-381126:-1:exon

SJ05684_RS29250
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29250
old locus tag: SJ05684_a40930
so part of: sequence
location: complement(381123..381326)
location: region:381123-381326:-1
so has part: feature:381123-381326:-1:exon
subclass of: SO_0000010

position:381123:-1
position: 381123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381326:-1
position: 381326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381123-381326:-1:exon

SJ05684_RS29250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29250
old locus tag: SJ05684_a40930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCE_0567 family metalloprotein
translation: MTDLEKLKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVGVAEKTFDAFAQLDAAKRELAASENSR
SIO_010081: SJ05684_RS29250
subclass of: SO_0000673
so part of: SJ05684_RS29250
location: complement(381123..381326)
location: region:381123-381326:-1
so has part: feature:381123-381326:-1:exon

WP_014857531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381123-381326:-1:exon

SJ05684_RS29255
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29255
old locus tag: SJ05684_a40940
so part of: sequence
location: complement(381349..381837)
location: region:381349-381837:-1
so has part: feature:381349-381837:-1:exon
subclass of: SO_0000010

position:381349:-1
position: 381349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381837:-1
position: 381837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381349-381837:-1:exon

SJ05684_RS29255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29255
old locus tag: SJ05684_a40940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAQDSYGLWRDKCDAELLANFTVTEEQRRAIPVIGDPEPDVLLRLDLFYAAVGVAIEERSGLLISRTLEISDEGIGRVLFTTRRLVVLSKTLRDAHRFGFNTLGKCAKTGTKLVKDAIKSIEAYPDVARA
SIO_010081: SJ05684_RS29255
subclass of: SO_0000673
so part of: SJ05684_RS29255
location: complement(381349..381837)
location: region:381349-381837:-1
so has part: feature:381349-381837:-1:exon

WP_014857530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381349-381837:-1:exon

SJ05684_RS29260
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifK
locus tag: SJ05684_RS29260
old locus tag: SJ05684_a40950
so part of: sequence
location: complement(382090..383631)
location: region:382090-383631:-1
so has part: feature:382090-383631:-1:exon
subclass of: SO_0000010

position:382090:-1
position: 382090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383631:-1
position: 383631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382090-383631:-1:exon

SJ05684_RS29260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifK
locus tag: SJ05684_RS29260
old locus tag: SJ05684_a40950
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331758.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein subunit beta
translation: MPQSAEKILDHAPLFREPEYRQMLAEKKLNFECPHPERLVTDQREYSKGWEYREKNLAREALVVNPAKACQPLGAVFAAAGFERTMSFVHGSQGCVAYYRSHLSRHFKEPASAVSSSMTEDAAVFGGLKNLVDGLANTYALYDPKMIAVSTTCMAEVIGDDLHGFIENAKSEGAVPPEFDVPFAHTPAFVGSHVDGYDSMVKGILEHFWKGQARTQAAGTINIIPGFDGFCVGNNRELQRLLTLMGVSYTFIQDASDQFDTPSDGEYRMYDGGTTIKALRAALNAEATLSLQHYNSRKTLEYCREVGQATAVFHYPLGINATDAFLMKVSAISGREIPETIRLERGRLVDAMADSQSWLHGKTYAIYGDPDFVYAMARFVMETGGEPRHCLATNGTAAWQAEMTELLASSPFGKQAKVWPGKDLWALRSLLFTEPVDLLIGNSYGKYLERDTGTPLIRLMFPIFDRHHHHRFPLMGYQGGLRLLTTILDTIFDRLDRETMQTAVTDYSYDLTR
SIO_010081: SJ05684_RS29260
subclass of: SO_0000673
so part of: SJ05684_RS29260
location: complement(382090..383631)
location: region:382090-383631:-1
so has part: feature:382090-383631:-1:exon

WP_042779273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382090-383631:-1:exon

SJ05684_RS29265
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifD
locus tag: SJ05684_RS29265
old locus tag: SJ05684_a40960
so part of: sequence
location: complement(383727..385241)
location: region:383727-385241:-1
so has part: feature:383727-385241:-1:exon
subclass of: SO_0000010

position:383727:-1
position: 383727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385241:-1
position: 385241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383727-385241:-1:exon

SJ05684_RS29265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifD
locus tag: SJ05684_RS29265
old locus tag: SJ05684_a40960
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532774.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein alpha chain
translation: MSLDYENDSALHQELITQVLSQYPHKAAKRRQKHLSVASDREAVGEEGETLSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGQYSWSQRRNYYVGTTGVDTFVTMQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGITIQSECPIGLIGDDIEAVSRKKAVEHETTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKADDKTDVEFETGPYDVNVIGDYNIGGDAWASRILLEEIGLRVVGNWSGDATLAEVERAPRAKLNLIHCYRSMNYICRHMEERYAIPWMEYNFFGPSQIEASLRKIARHFGPTIEERAERVIAKYRPLVDAVIDKYWPRLQGKRVMLYVGGLRPRHVITAYEDLGMQIVGTGYEFAHNDDYQRTGHYVKTGTLIYDDATSYELDTFIERIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWDLYDAPWKKMTVPTAAVAAE
SIO_010081: SJ05684_RS29265
subclass of: SO_0000673
so part of: SJ05684_RS29265
location: complement(383727..385241)
location: region:383727-385241:-1
so has part: feature:383727-385241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383727-385241:-1:exon

SJ05684_RS29270
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: nifH
locus tag: SJ05684_RS29270
old locus tag: SJ05684_a40970
so part of: sequence
location: complement(385338..386228)
location: region:385338-386228:-1
so has part: feature:385338-386228:-1:exon
subclass of: SO_0000010

position:385338:-1
position: 385338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386228:-1
position: 386228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385338-386228:-1:exon

SJ05684_RS29270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: nifH
locus tag: SJ05684_RS29270
old locus tag: SJ05684_a40970
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MAGLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNAKAQDTVLHLAAKEGSVEDLEVEDVLKVGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLAEALAAKLNSRLIHFVPRDNIVQHAELRKMTVIQYAPESQQAAEYRALADKIHANSGQGTVPTPITMEELEDMLLDFGVMKTDEQMLAELQAKEAAAAAQ
SIO_010081: SJ05684_RS29270
subclass of: SO_0000673
so part of: SJ05684_RS29270
location: complement(385338..386228)
location: region:385338-386228:-1
so has part: feature:385338-386228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385338-386228:-1:exon

SJ05684_RS29275
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29275
pseudo: true
so part of: sequence
location: complement(<386473..386643)
location: region:386473-386643:-1
so has part: feature:386473-386643:-1:exon
subclass of: SO_0000010

position:386473:-1
position: 386473
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:386643:-1
position: 386643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386473-386643:-1:exon

SJ05684_RS29275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533497.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
SIO_010081: SJ05684_RS29275
subclass of: SO_0000673
so part of: SJ05684_RS29275
location: complement(<386473..386643)
location: region:386473-386643:-1
so has part: feature:386473-386643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386473-386643:-1:exon

SJ05684_RS29280
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29280
old locus tag: SJ05684_a40990
pseudo: true
so part of: sequence
location: complement(387050..387762)
location: region:387050-387762:-1
so has part: feature:387050-387762:-1:exon
subclass of: SO_0000010

position:387050:-1
position: 387050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387762:-1
position: 387762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387050-387762:-1:exon

SJ05684_RS29280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29280
old locus tag: SJ05684_a40990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS29280
subclass of: SO_0000673
so part of: SJ05684_RS29280
location: complement(387050..387762)
location: region:387050-387762:-1
so has part: feature:387050-387762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387050-387762:-1:exon

SJ05684_RS29285
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29285
old locus tag: SJ05684_a41000
so part of: sequence
location: 388030..388560
location: region:388030-388560:1
so has part: feature:388030-388560:1:exon
subclass of: SO_0000010

position:388030:1
position: 388030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388560:1
position: 388560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388030-388560:1:exon

SJ05684_RS29285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29285
old locus tag: SJ05684_a41000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240696.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVARALDLEIVLAPKKLMPAIRNILDSASASSDVLTSDQRKLVGRLERWFAQHRGGFGSASEADTFKDSLALLRHLPLSAEEMDTFNEATARLERWQADPPSRQELSRIAHAVRHLRNAAVHRDRDDAVPRSAYALDEEDDNA
SIO_010081: SJ05684_RS29285
subclass of: SO_0000673
so part of: SJ05684_RS29285
location: 388030..388560
location: region:388030-388560:1
so has part: feature:388030-388560:1:exon

WP_015633415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388030-388560:1:exon

SJ05684_RS29290
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29290
old locus tag: SJ05684_a41010
so part of: sequence
location: 388553..389782
location: region:388553-389782:1
so has part: feature:388553-389782:1:exon
subclass of: SO_0000010

position:388553:1
position: 388553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389782:1
position: 389782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388553-389782:1:exon

SJ05684_RS29290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29290
old locus tag: SJ05684_a41010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006699239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HipA domain-containing protein
translation: MPKVTVLDVRLYGEPVSTLTNLQDGRTIFAFNEAYIEDEKRRTLSLSLKDPFGALITKFRPYNMVVPPFFSNLLPEGPLRKYLADRAGVKPSREFFLLWMLGRDLPGAVTVHPSEGDDAPPDDEQAIVEARPNALRFSLAGVQLKFSAFKNDKKGGGLTIPAEGTGGSWIVKLPSQQYSGVPENEFAMMTIARMMGMDVPELQLVDLDAVSGLPQGVGELHGQALAIKRFDRTPEGAVHIEDFAQVFGVFPDHKYDKGNYRMIGRVLGIETSTADVAEFIRRLVFSTLIGNGDMHLKNWSLIYPDRRTPALSPAYDLLSTIPYIEGEDTAALNFSRTKKMAALSKDELAHLAAKAELSEKLVIDTARETVERFRAVWEAEKKNLPMAAKVADTIDTHAPTVELYREFAK
SIO_010081: SJ05684_RS29290
subclass of: SO_0000673
so part of: SJ05684_RS29290
location: 388553..389782
location: region:388553-389782:1
so has part: feature:388553-389782:1:exon

WP_014857525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388553-389782:1:exon

SJ05684_RS30185
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30185
old locus tag: SJ05684_a41040
so part of: sequence
location: complement(390538..390684)
location: region:390538-390684:-1
so has part: feature:390538-390684:-1:exon
subclass of: SO_0000010

position:390538:-1
position: 390538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390684:-1
position: 390684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390538-390684:-1:exon

SJ05684_RS30185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30185
old locus tag: SJ05684_a41040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAGVVINLMGVSFDWPLGAAIGVVVVGMALALMSVLNHLEHKATVRL
SIO_010081: SJ05684_RS30185
subclass of: SO_0000673
so part of: SJ05684_RS30185
location: complement(390538..390684)
location: region:390538-390684:-1
so has part: feature:390538-390684:-1:exon

WP_158499789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390538-390684:-1:exon

SJ05684_RS29305
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29305
pseudo: true
so part of: sequence
location: complement(<390843..>391187)
location: region:390843-391187:-1
so has part: feature:390843-391187:-1:exon
subclass of: SO_0000010

position:390843:-1
position: 390843
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:391187:-1
position: 391187
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390843-391187:-1:exon

SJ05684_RS29305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012706579.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SJ05684_RS29305
subclass of: SO_0000673
so part of: SJ05684_RS29305
location: complement(<390843..>391187)
location: region:390843-391187:-1
so has part: feature:390843-391187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390843-391187:-1:exon

SJ05684_RS29310
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29310
old locus tag: SJ05684_a41070
so part of: sequence
location: 391352..392068
location: region:391352-392068:1
so has part: feature:391352-392068:1:exon
subclass of: SO_0000010

position:391352:1
position: 391352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392068:1
position: 392068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391352-392068:1:exon

SJ05684_RS29310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29310
old locus tag: SJ05684_a41070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MSEVARDPLYRRHRYPAEIIAHAVWLYFRFPLSLRMVEDMLASRGIIVTHQTIRSWAEKFGRHFAREIKRRSAGCLGDKWHLDECVVAINGKKQWLWRAVDQDGFVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMPGVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHQDLRNAAMQIWSKIACVAAA
SIO_010081: SJ05684_RS29310
subclass of: SO_0000673
so part of: SJ05684_RS29310
location: 391352..392068
location: region:391352-392068:1
so has part: feature:391352-392068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391352-392068:1:exon

SJ05684_RS29315
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29315
so part of: sequence
location: complement(392190..392567)
location: region:392190-392567:-1
so has part: feature:392190-392567:-1:exon
subclass of: SO_0000010

position:392190:-1
position: 392190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392567:-1
position: 392567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392190-392567:-1:exon

SJ05684_RS29315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29315
inference: COORDINATES: protein motif:HMM:NF022517.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2867 domain-containing protein
translation: MTAAEAAWRVLGSAPRWVRNLLCFRNRLVPLIGLNATADTRHSDLVASLPLMHSDDSQTVFGYDDHHLLFRLVVDVREGPADSQVVGMTTLVRRRSLLGRLYLAAAIPFHKAIIPSLLTAIERPG
SIO_010081: SJ05684_RS29315
subclass of: SO_0000673
so part of: SJ05684_RS29315
location: complement(392190..392567)
location: region:392190-392567:-1
so has part: feature:392190-392567:-1:exon

WP_234892914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392190-392567:-1:exon

SJ05684_RS29320
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29320
old locus tag: SJ05684_a41100
pseudo: true
so part of: sequence
location: complement(393250..>393918)
location: region:393250-393918:-1
so has part: feature:393250-393918:-1:exon
subclass of: SO_0000010

position:393250:-1
position: 393250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393918:-1
position: 393918
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393250-393918:-1:exon

SJ05684_RS29320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29320
old locus tag: SJ05684_a41100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SJ05684_RS29320
subclass of: SO_0000673
so part of: SJ05684_RS29320
location: complement(393250..>393918)
location: region:393250-393918:-1
so has part: feature:393250-393918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393250-393918:-1:exon

SJ05684_RS29325
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29325
old locus tag: SJ05684_a41110
pseudo: true
so part of: sequence
location: complement(393972..394684)
location: region:393972-394684:-1
so has part: feature:393972-394684:-1:exon
subclass of: SO_0000010

position:393972:-1
position: 393972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394684:-1
position: 394684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393972-394684:-1:exon

SJ05684_RS29325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29325
old locus tag: SJ05684_a41110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SJ05684_RS29325
subclass of: SO_0000673
so part of: SJ05684_RS29325
location: complement(393972..394684)
location: region:393972-394684:-1
so has part: feature:393972-394684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393972-394684:-1:exon

SJ05684_RS29330
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29330
old locus tag: SJ05684_a41120
pseudo: true
so part of: sequence
location: 394906..>395199
location: region:394906-395199:1
so has part: feature:394906-395199:1:exon
subclass of: SO_0000010

position:394906:1
position: 394906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395199:1
position: 395199
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394906-395199:1:exon

SJ05684_RS29330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29330
old locus tag: SJ05684_a41120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612363.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: SJ05684_RS29330
subclass of: SO_0000673
so part of: SJ05684_RS29330
location: 394906..>395199
location: region:394906-395199:1
so has part: feature:394906-395199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394906-395199:1:exon

SJ05684_RS30895
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS30895
so part of: sequence
location: complement(395222..395551)
location: region:395222-395551:-1
so has part: feature:395222-395551:-1:exon
subclass of: SO_0000010

position:395222:-1
position: 395222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395551:-1
position: 395551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395222-395551:-1:exon

SJ05684_RS30895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS30895
inference: COORDINATES: protein motif:HMM:NF036442.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5372 family protein
translation: MASRPWLSFKSRTAVRTDTQARIEFEVTHPFHPWRGQRFVLSTRKQNWGEDRVMFYDADGRLRSLLASWTDVAAPDVFIEIAAGRSFVRPDDLATLAALIEQIERSHGG
SIO_010081: SJ05684_RS30895
subclass of: SO_0000673
so part of: SJ05684_RS30895
location: complement(395222..395551)
location: region:395222-395551:-1
so has part: feature:395222-395551:-1:exon

WP_015633592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395222-395551:-1:exon

SJ05684_RS29340
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29340
pseudo: true
so part of: sequence
location: <395530..>395787
location: region:395530-395787:1
so has part: feature:395530-395787:1:exon
subclass of: SO_0000010

position:395530:1
position: 395530
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:395787:1
position: 395787
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395530-395787:1:exon

SJ05684_RS29340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976703.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SJ05684_RS29340
subclass of: SO_0000673
so part of: SJ05684_RS29340
location: <395530..>395787
location: region:395530-395787:1
so has part: feature:395530-395787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395530-395787:1:exon

SJ05684_RS29345
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29345
pseudo: true
so part of: sequence
location: 395828..>396058
location: region:395828-396058:1
so has part: feature:395828-396058:1:exon
subclass of: SO_0000010

position:395828:1
position: 395828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396058:1
position: 396058
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395828-396058:1:exon

SJ05684_RS29345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_071831742.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AAA family ATPase
SIO_010081: SJ05684_RS29345
subclass of: SO_0000673
so part of: SJ05684_RS29345
location: 395828..>396058
location: region:395828-396058:1
so has part: feature:395828-396058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395828-396058:1:exon

SJ05684_RS29350
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29350
so part of: sequence
location: complement(396194..396427)
location: region:396194-396427:-1
so has part: feature:396194-396427:-1:exon
subclass of: SO_0000010

position:396194:-1
position: 396194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396427:-1
position: 396427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396194-396427:-1:exon

SJ05684_RS29350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875417.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDMRKLVGSNFARLRREKGLTQEEVEARSGFSQQYLSSLERGRRNPTVITLYELAQALGVSHVELVTPTDETPFGTR
SIO_010081: SJ05684_RS29350
subclass of: SO_0000673
so part of: SJ05684_RS29350
location: complement(396194..396427)
location: region:396194-396427:-1
so has part: feature:396194-396427:-1:exon

WP_010875417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396194-396427:-1:exon

SJ05684_RS29355
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29355
old locus tag: SJ05684_a41170
so part of: sequence
location: 396646..396969
location: region:396646-396969:1
so has part: feature:396646-396969:1:exon
subclass of: SO_0000010

position:396646:1
position: 396646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396969:1
position: 396969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396646-396969:1:exon

SJ05684_RS29355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29355
old locus tag: SJ05684_a41170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor TraM
translation: MNDMGSSEVNDESKEKEARYSVMTKSELEALAVSAIREHRRLLWADQAVYEEWLRASDDPSISGPVLQTLQDEYVARQKRSEAQQEELSDILDALGFVPDVPFDDDN
SIO_010081: SJ05684_RS29355
subclass of: SO_0000673
so part of: SJ05684_RS29355
location: 396646..396969
location: region:396646-396969:1
so has part: feature:396646-396969:1:exon

WP_014858045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396646-396969:1:exon

SJ05684_RS29930
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29930
pseudo: true
so part of: sequence
location: complement(396973..397685)
location: region:396973-397685:-1
so has part: feature:396973-397685:-1:exon
subclass of: SO_0000010

position:396973:-1
position: 396973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397685:-1
position: 397685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396973-397685:-1:exon

SJ05684_RS29930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875419.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
SIO_010081: SJ05684_RS29930
subclass of: SO_0000673
so part of: SJ05684_RS29930
location: complement(396973..397685)
location: region:396973-397685:-1
so has part: feature:396973-397685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396973-397685:-1:exon

SJ05684_RS29370
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbI
locus tag: SJ05684_RS29370
old locus tag: SJ05684_a41210
pseudo: true
so part of: sequence
location: complement(397988..399282)
location: region:397988-399282:-1
so has part: feature:397988-399282:-1:exon
subclass of: SO_0000010

position:397988:-1
position: 397988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399282:-1
position: 399282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397988-399282:-1:exon

SJ05684_RS29370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbI
locus tag: SJ05684_RS29370
old locus tag: SJ05684_a41210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875420.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
SIO_010081: SJ05684_RS29370
subclass of: SO_0000673
so part of: SJ05684_RS29370
location: complement(397988..399282)
location: region:397988-399282:-1
so has part: feature:397988-399282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397988-399282:-1:exon

SJ05684_RS29375
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbH
locus tag: SJ05684_RS29375
old locus tag: SJ05684_a41220
so part of: sequence
location: complement(399294..399740)
location: region:399294-399740:-1
so has part: feature:399294-399740:-1:exon
subclass of: SO_0000010

position:399294:-1
position: 399294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399740:-1
position: 399740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399294-399740:-1:exon

SJ05684_RS29375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbH
locus tag: SJ05684_RS29375
old locus tag: SJ05684_a41220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRKLLISFVTVAILSGCQTAEDGLTTSSTPTTVTGPAASAIAGDMASRLAEQIGPSATTTIKIEKDSSDFASALEAALKGWGYTVVTDGKVGRVGKDVKLVELGYSIDGVDGQVLARLSTPSIALGRAYSATAAGAVPASPLSIMQRN
SIO_010081: SJ05684_RS29375
subclass of: SO_0000673
so part of: SJ05684_RS29375
location: complement(399294..399740)
location: region:399294-399740:-1
so has part: feature:399294-399740:-1:exon

WP_014858040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399294-399740:-1:exon

SJ05684_RS29380
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbG
locus tag: SJ05684_RS29380
old locus tag: SJ05684_a41230
so part of: sequence
location: complement(399744..400556)
location: region:399744-400556:-1
so has part: feature:399744-400556:-1:exon
subclass of: SO_0000010

position:399744:-1
position: 399744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400556:-1
position: 400556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399744-400556:-1:exon

SJ05684_RS29380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbG
locus tag: SJ05684_RS29380
old locus tag: SJ05684_a41230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427455.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MHRTGLIAAAGCLATLVFASAAEAQSMTTNEVKGTSISRKWRGTAGLVTTGPDGKVIFLYGETQPSVVCSPLQVCDIELQGGEIVRDVLVGDSVRWKVEPATSGAIGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSHPSQYMARVGFEYTEDVSTKLADINSRLETGGIPGTAPDKPNFSYSVSGSAPWKPKRVYSDGAKTYVQFSKSISGQDAPVLFVVSGGQNRIVNYRMKNDMMIVDYAVDKAILVSGVGWRQQKITIRRGG
SIO_010081: SJ05684_RS29380
subclass of: SO_0000673
so part of: SJ05684_RS29380
location: complement(399744..400556)
location: region:399744-400556:-1
so has part: feature:399744-400556:-1:exon

WP_014858039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399744-400556:-1:exon

SJ05684_RS29385
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29385
old locus tag: SJ05684_a41240
so part of: sequence
location: complement(400574..401236)
location: region:400574-401236:-1
so has part: feature:400574-401236:-1:exon
subclass of: SO_0000010

position:400574:-1
position: 400574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401236:-1
position: 401236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400574-401236:-1:exon

SJ05684_RS29385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29385
old locus tag: SJ05684_a41240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018482029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAANRAPENPYLAARQEWTERYGSYVRAAAAWRTVGILGLAMAVIGFGYAMYLSTEVKLVPYIVQVDKLGTSVTTGFPEQIEYADVRVVRATLGNFVTSFRSITPDAAVQKQYIDRTYALLRTSHPSTEKINAWFRGNSPFEKAKTATVAIEVNNIVALSNQTYQIDWTEYERDRKGKEIGTRRFRGIATVTLTAPQDEATIRLNPIGLYVRDFDWTAQL
SIO_010081: SJ05684_RS29385
subclass of: SO_0000673
so part of: SJ05684_RS29385
location: complement(400574..401236)
location: region:400574-401236:-1
so has part: feature:400574-401236:-1:exon

WP_014858038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400574-401236:-1:exon

SJ05684_RS29390
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbL
locus tag: SJ05684_RS29390
old locus tag: SJ05684_a41250
so part of: sequence
location: complement(401260..402435)
location: region:401260-402435:-1
so has part: feature:401260-402435:-1:exon
subclass of: SO_0000010

position:401260:-1
position: 401260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402435:-1
position: 402435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401260-402435:-1:exon

SJ05684_RS29390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbL
locus tag: SJ05684_RS29390
old locus tag: SJ05684_a41250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875424.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MVKISLARSLLIAGLAYVAFEARAFAQEGLVLTELENHISAAAKGWETTILDAAKSLFWILATIEIGIAAISLALQAASLDSWFAELVRRIMFVGFFAFVLTQGPTFARAVIDSLFQIGAGGGSASPAEIFDAGIRVASQMSQQAQFDVFEDNALAIAAVLAMGVVVICFSLVAAIFVSVMVEMYVGLLAGMIMLGLGGSSFTKDFAVRYLVYAFGVGMKLMALVMIAKIGSQVLLGRANAPTASSDQFVTTLAIAGISVVVFIIAMYVPSIIQGVVQGASVSGGMETIRHGGQAASFAAGAGFLAGGAARTGFTAGQSARAAGSSLAGAALRGFGAGIGSASSAAGSAAKEKAIGSPGAYAGSILGLANAKLDESRGGHSGHKPPPERKD
SIO_010081: SJ05684_RS29390
subclass of: SO_0000673
so part of: SJ05684_RS29390
location: complement(401260..402435)
location: region:401260-402435:-1
so has part: feature:401260-402435:-1:exon

WP_034859627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401260-402435:-1:exon

SJ05684_RS29395
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbK
locus tag: SJ05684_RS29395
old locus tag: SJ05684_a41260
so part of: sequence
location: complement(402429..402626)
location: region:402429-402626:-1
so has part: feature:402429-402626:-1:exon
subclass of: SO_0000010

position:402429:-1
position: 402429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402626:-1
position: 402626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402429-402626:-1:exon

SJ05684_RS29395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbK
locus tag: SJ05684_RS29395
old locus tag: SJ05684_a41260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858036.1
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion protein TrbK
translation: MSRAVIIALVILVPAVSTTATALIVNSRASNPSAPEEQRTAKEKFFGAGKALPPIKDGQEMGPRW
SIO_010081: SJ05684_RS29395
subclass of: SO_0000673
so part of: SJ05684_RS29395
location: complement(402429..402626)
location: region:402429-402626:-1
so has part: feature:402429-402626:-1:exon

WP_014858036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402429-402626:-1:exon

SJ05684_RS29400
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbJ
locus tag: SJ05684_RS29400
old locus tag: SJ05684_a41270
so part of: sequence
location: complement(402623..403426)
location: region:402623-403426:-1
so has part: feature:402623-403426:-1:exon
subclass of: SO_0000010

position:402623:-1
position: 402623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403426:-1
position: 403426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402623-403426:-1:exon

SJ05684_RS29400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbJ
locus tag: SJ05684_RS29400
old locus tag: SJ05684_a41270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018210390.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPRRCSMSNKLLAGLAVVAVTVGTGEPVGAGTATGAATEWTQVLNNGELVALVGKSNEQIQNQLTQISQLAQQIETQLNIYQNLLQNTATLPSHMWGQVERDLNRLRSIVDQGQSIAFSMGNADDVLQQRFQSYATLKTNLPRNETFSSTYETWSDTNRDTIASTLNAASLTADQFDSEETTMSSLRSMSETADGQMKALQVGHEIAAQQVGQMQKLRGLVSQQMTMMGTWLQTEQTDKDLAQARREKFFNADVKSIPEGQKMEPRW
SIO_010081: SJ05684_RS29400
subclass of: SO_0000673
so part of: SJ05684_RS29400
location: complement(402623..403426)
location: region:402623-403426:-1
so has part: feature:402623-403426:-1:exon

WP_014858035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402623-403426:-1:exon

SJ05684_RS29405
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29405
old locus tag: SJ05684_a41280
pseudo: true
so part of: sequence
location: complement(403398..>405629)
location: region:403398-405629:-1
so has part: feature:403398-405629:-1:exon
subclass of: SO_0000010

position:403398:-1
position: 403398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405629:-1
position: 405629
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403398-405629:-1:exon

SJ05684_RS29405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29405
old locus tag: SJ05684_a41280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018098144.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
SIO_010081: SJ05684_RS29405
subclass of: SO_0000673
so part of: SJ05684_RS29405
location: complement(403398..>405629)
location: region:403398-405629:-1
so has part: feature:403398-405629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403398-405629:-1:exon

SJ05684_RS29410
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29410
old locus tag: SJ05684_a41290
so part of: sequence
location: 405707..406729
location: region:405707-406729:1
so has part: feature:405707-406729:1:exon
subclass of: SO_0000010

position:405707:1
position: 405707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406729:1
position: 406729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405707-406729:1:exon

SJ05684_RS29410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29410
old locus tag: SJ05684_a41290
function: Transposase and inactivated derivatives
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971054.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQITTVGLDLAKSVFQAHGVDETGATVLVKRLHRKQMLPFFSKLPPCLIGMEACGTAHHWARTLAAMGHEVRLIPPSYVKPYVKRGKSDALDAEAICEAVQRPTMRFVPVKTVAQQSILMTHRARSLLVRQRTMVANALRAHLAELGLVANPGIANLAKLAQQALSGESSLPSYARTTLDILIRQILVFADEIAALDQQLLAWHADSEASRRLSAIPGLGIVTATAVAATVTDPEQFRSGRQFAAWLGLTPQQCSTGGKTQLGGISKQGDRYLRRLLVVGATAVIRHTKDKATPLANWIRKLLEKKPFRLVSVALANKLARIAWVVLTRKEAYRAHEMIA
SIO_010081: SJ05684_RS29410
subclass of: SO_0000673
so part of: SJ05684_RS29410
location: 405707..406729
location: region:405707-406729:1
so has part: feature:405707-406729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405707-406729:1:exon

SJ05684_RS29415
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29415
old locus tag: SJ05684_a41300
so part of: sequence
location: complement(406929..407162)
location: region:406929-407162:-1
so has part: feature:406929-407162:-1:exon
subclass of: SO_0000010

position:406929:-1
position: 406929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407162:-1
position: 407162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406929-407162:-1:exon

SJ05684_RS29415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29415
old locus tag: SJ05684_a41300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVALKRFRATGPSFADLVPYAGLVDNGVLLLKDGSLMAGWYFAGPDSDSATDFERNELSRQINAILPPMARAFCRVV
SIO_010081: SJ05684_RS29415
subclass of: SO_0000673
so part of: SJ05684_RS29415
location: complement(406929..407162)
location: region:406929-407162:-1
so has part: feature:406929-407162:-1:exon

WP_014858033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406929-407162:-1:exon

SJ05684_RS29420
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29420
old locus tag: SJ05684_a41310
so part of: sequence
location: complement(407173..407472)
location: region:407173-407472:-1
so has part: feature:407173-407472:-1:exon
subclass of: SO_0000010

position:407173:-1
position: 407173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407472:-1
position: 407472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407173-407472:-1:exon

SJ05684_RS29420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29420
old locus tag: SJ05684_a41310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEALSERYRNRIHRALSRPNLLMGADRELVLITGLAAVILIFVVLTVYSALFGVVVWIVIVGLLRMMAKSDPLMRQVYVRHISYKPYYKATTSPWRRY
SIO_010081: SJ05684_RS29420
subclass of: SO_0000673
so part of: SJ05684_RS29420
location: complement(407173..407472)
location: region:407173-407472:-1
so has part: feature:407173-407472:-1:exon

WP_010875429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407173-407472:-1:exon

SJ05684_RS29425
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29425
old locus tag: SJ05684_a41320
so part of: sequence
location: complement(407465..407848)
location: region:407465-407848:-1
so has part: feature:407465-407848:-1:exon
subclass of: SO_0000010

position:407465:-1
position: 407465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407848:-1
position: 407848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407465-407848:-1:exon

SJ05684_RS29425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29425
old locus tag: SJ05684_a41320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MSRKNEFISIALLASPLILASVAPALASSGGSLPWEGPLEQIQESITGPVAGYIALAAVAIAGGMLIFGGELNDFARRLMYVVLVAGILLGATTIVGLFGATGASIGLTNDRVTSTRPSAEGEGAHG
SIO_010081: SJ05684_RS29425
subclass of: SO_0000673
so part of: SJ05684_RS29425
location: complement(407465..407848)
location: region:407465-407848:-1
so has part: feature:407465-407848:-1:exon

WP_034859524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407465-407848:-1:exon

SJ05684_RS29430
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
gene: trbB
locus tag: SJ05684_RS29430
old locus tag: SJ05684_a41330
so part of: sequence
location: complement(407838..408815)
location: region:407838-408815:-1
so has part: feature:407838-408815:-1:exon
subclass of: SO_0000010

position:407838:-1
position: 407838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408815:-1
position: 408815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407838-408815:-1:exon

SJ05684_RS29430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
gene: trbB
locus tag: SJ05684_RS29430
old locus tag: SJ05684_a41330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MEQLRSHPRLVRKLQEALGDQLCVALDDSNVVEIMLNPDGKLFIERLGHGVAPAGEMSSAAAEMVIGTVAHALQSEVDTEQPIISGELPIGGHRFEGLLPPVVAKPSFTIRRRASRLIPLDDYVRSGVMTEAQAATIRSAIDSRLNIIISGGTASGKTTLANAVIHEIVRSAPEDRLVILEDTAEIQCAADNAVLLRTSDTVDMARLLKSTMRLRPDRIVVGEVRDGAALTLLKAWNTGHPGGVATIHSNTATSALRRLEQLTAEASQQPMHEVIGEVVDLIVSIERTPRGRRVRDIIQVERFANGRYEIESDQLTEEREARHVA
SIO_010081: SJ05684_RS29430
subclass of: SO_0000673
so part of: SJ05684_RS29430
location: complement(407838..408815)
location: region:407838-408815:-1
so has part: feature:407838-408815:-1:exon

WP_015633597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407838-408815:-1:exon

SJ05684_RS29435
type: Gene
subclass of: SO_0000704
RO_0002162: 716928
locus tag: SJ05684_RS29435
old locus tag: SJ05684_a41360
so part of: sequence
location: complement(408826..409452)
location: region:408826-409452:-1
so has part: feature:408826-409452:-1:exon
subclass of: SO_0000010

position:408826:-1
position: 408826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409452:-1
position: 409452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408826-409452:-1:exon

SJ05684_RS29435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 716928
locus tag: SJ05684_RS29435
old locus tag: SJ05684_a41360
EC number: 2.3.1.184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014858030.1
GO function: GO:0061579 - N-acyl homoserine lactone synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MQILAISKPRNIEEAQLLRSHHQLRARVFSDRLGWEVNVVGGCESDTFDDLQPTYILAVSSNDRVVGCARLLPALGPTMVANVFPSLLSAGHLDAHSSMVESSRFCVDTFLAESRGDGSIHEATLTMFAGIIEWSVANRYTEIVTVTDLRFERILARVGWPLQRIGEPRPIGATVAVAGTMPAKADTFMRLRPANYRSQIISTFGQSA
SIO_010081: SJ05684_RS29435
subclass of: SO_0000673
so part of: SJ05684_RS29435
location: complement(408826..409452)
location: region:408826-409452:-1
so has part: feature:408826-409452:-1:exon

WP_014858030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408826-409452:-1:exon