Enterococcus raffinosus strain F162_2 plasmid pF162_2_2, complete sequence.
type: Entry
definition: Enterococcus raffinosus strain F162_2 plasmid pF162_2_2, complete sequence.
sequence version: NZ_CP072890.1
sequence date: 2023-04-29
sequence: sequence
division: CON
label: NZ_CP072890.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18631319
keyword: RefSeq
source: Enterococcus raffinosus
organism: Enterococcus raffinosus
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP072890.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100x\nSequencing Technology :: Illumina MiniSeq, Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/29/2023 05:05:27\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,126\nCDSs (total) :: 4,033\nGenes (coding) :: 3,983\nCDSs (with protein) :: 3,983\nGenes (RNA) :: 93\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 4\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 22 of 50\nPseudo Genes (incomplete) :: 20 of 50\nPseudo Genes (internal stop) :: 12 of 50\nPseudo Genes (multiple problems) :: 3 of 50\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 37686
topology: circular
so has quality: SO_0000988
location: 1..37686
location: region:1-37686:1
RO_0002162: 71452

NZ_CP072890
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18631319
type: BioSample
SIO_000068: biosample

1
title: Molecular characteristics of optrA- or poxtA-carrying Enterococci originating from river water in Switzerland
author: Biggel, M.
journal: Unpublished

2
title: Direct Submission
author: Biggel, M.
journal: Submitted (06-APR-2021) Institute for Food Safety and Hygiene, University of Zurich, Winterthurerstrasse 272, Zurich 8057, Switzerland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37686:1
position: 37686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37686:1:source
so part of: sequence
organism: Enterococcus raffinosus
mol type: genomic DNA
strain: F162_2
isolation source: stream/river surface water
plasmid: pF162_2_2
country: Switzerland: Giubiasco
lat lon: 46.175 N 8.9911 E
collection date: 2020-05-03
collected by: ILS, University of Zurich

71452
type: Taxonomy
SIO_000068: taxonomy

J9537_RS20315
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20315
old locus tag: J9537_20315
so part of: sequence
location: join(37647..37686,1..371)
location: region:1-37686:1
so has part: feature:37647-37686:1:exon
so has part: feature:1-371:1:exon
subclass of: SO_0000010

67042561
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:37647-37686:1:exon

position:37647:1
position: 37647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-371:1:exon

position:371:1
position: 371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

J9537_RS20315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20315
old locus tag: J9537_20315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIIKITNKNDYIQILNFLEKNTKYIELLQLIDDNESNFIIEKYNQLLITKKNVFNWNDSGAKGVVYKFDIKFSDKEKIFNDLRKINSFFYNTWDNKLGETVETTEFGYMNIAFFDSKGKLLFYTITHEGIAWIQH
SIO_010081: J9537_RS20315
subclass of: SO_0000673
so part of: J9537_RS20315
location: join(37647..37686,1..371)
location: region:1-37686:1
so has part: feature:37647-37686:1:exon
so has part: feature:1-371:1:exon

WP_125395807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37647-37686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-371:1:exon

J9537_RS20320
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20320
old locus tag: J9537_20320
so part of: sequence
location: 356..631
location: region:356-631:1
so has part: feature:356-631:1:exon
subclass of: SO_0000010

67042562
type: Gene
SIO_000068: ncbigene

position:356:1
position: 356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631:1
position: 631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356-631:1:exon

J9537_RS20320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20320
old locus tag: J9537_20320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002325622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSTLKKLYVYSADLIEVDNNKPQDFDLYEIEARSSLETRELSLVVDFINKEVSGDIVAFGSWYDLDKETVIELLNQLKKENKILRTFNFI
SIO_010081: J9537_RS20320
subclass of: SO_0000673
so part of: J9537_RS20320
location: 356..631
location: region:356-631:1
so has part: feature:356-631:1:exon

WP_125395805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356-631:1:exon

J9537_RS20325
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20325
old locus tag: J9537_20325
so part of: sequence
location: complement(660..917)
location: region:660-917:-1
so has part: feature:660-917:-1:exon
subclass of: SO_0000010

67042563
type: Gene
SIO_000068: ncbigene

position:660:-1
position: 660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917:-1
position: 917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660-917:-1:exon

J9537_RS20325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20325
old locus tag: J9537_20325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010717195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANNDLNDINKRIEKLKIQKNILRANSEQNVNRKIRTRKLIQKGALLEKYFDIEHLSPEETEELLKIFSEYVKANSPKKFKKNED
SIO_010081: J9537_RS20325
subclass of: SO_0000673
so part of: J9537_RS20325
location: complement(660..917)
location: region:660-917:-1
so has part: feature:660-917:-1:exon

WP_218257687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660-917:-1:exon

J9537_RS20330
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20330
old locus tag: J9537_20330
so part of: sequence
location: complement(920..1219)
location: region:920-1219:-1
so has part: feature:920-1219:-1:exon
subclass of: SO_0000010

67042564
type: Gene
SIO_000068: ncbigene

position:920:-1
position: 920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219:-1
position: 1219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920-1219:-1:exon

J9537_RS20330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20330
old locus tag: J9537_20330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002332653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENQDQNINAINGNFNSKTKPKKRKKKTVSDIELQIKELQKKKEELILKSKADIGDFVLSTLSKNNISIESIEENKELFYDELETLLNENSQNFSELLK
SIO_010081: J9537_RS20330
subclass of: SO_0000673
so part of: J9537_RS20330
location: complement(920..1219)
location: region:920-1219:-1
so has part: feature:920-1219:-1:exon

WP_125395801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:920-1219:-1:exon

J9537_RS20335
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
gene: mobQ
locus tag: J9537_RS20335
old locus tag: J9537_20335
so part of: sequence
location: 1502..3496
location: region:1502-3496:1
so has part: feature:1502-3496:1:exon
subclass of: SO_0000010

67042565
type: Gene
SIO_000068: ncbigene

position:1502:1
position: 1502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496:1
position: 3496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502-3496:1:exon

J9537_RS20335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
gene: mobQ
locus tag: J9537_RS20335
old locus tag: J9537_20335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002371376.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MIQLAIFHLSMTIAKREGGKRSLIAMASYRSGEKLYSELYEKTNLYNHRTVKPEAFILKPDYVPNEYLDRQTLWNKMELSEKQPNARLCRELNVALPIELNNSDQRMLIEDFVKDNFVSEGMIADVAIHRDDENNPHAHIMLTMREVDSEGNILNKRKRIPKLDENGNQIFNEKGQRVTVSIKTNDWDRKSLVSEIRKDWADKVNQYLKDRNIDQQITEKSHAELGKKELPTIHEGFYSKKLEDKGVISELKRKNLEIQSYNDILAELDKLESQEKVLKQDQNFTLKFEKTFSPLEKGELKNLSKELKLFINDENIDKRLGELKRWENSLIFNNKMEIQKQRLMLSKISSERDMLTKANEILDKQAERFFKKSYPSLNIDKFSNHEVRAMVNETIFRKQLLNKDQLAEVIYNERVVEKEESKKIFKEKPFQTSRYLDSKIKQVEDSITKEKNPERKEILSIKKEKLIGIKQGLIEYVQSEVERKFDKNVSIDSVIEGEMLLAKADYYKTTDFSKVEGVARFSSEEINSMLEQSKGFLTNIQTVKIPNDCQGVFFVQDSMKCIDELSPLAKHNLKKVVNRNAYLPDSDKLEISKEIENTNKDQSQELGKNEPEKNEVSIKMFQFAKSINRLLSGNQPQKKRNLDKLIKQTKAKENQSLQRNIPLR
SIO_010081: J9537_RS20335
subclass of: SO_0000673
so part of: J9537_RS20335
location: 1502..3496
location: region:1502-3496:1
so has part: feature:1502-3496:1:exon

WP_245001368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1502-3496:1:exon

J9537_RS20340
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20340
old locus tag: J9537_20340
so part of: sequence
location: 3705..4319
location: region:3705-4319:1
so has part: feature:3705-4319:1:exon
subclass of: SO_0000010

67042566
type: Gene
SIO_000068: ncbigene

position:3705:1
position: 3705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4319:1
position: 4319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705-4319:1:exon

J9537_RS20340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20340
old locus tag: J9537_20340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002298870.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIAYIRVSSIDQNEQRQIEEMKKFGAEKIFIEKQSGATISHRPIFQEALDFVREQDIFIVEAIDRLGRNYDEIIDSVNYLKKKNVRLIITSLPIMAEAIGNPLLDKFIKDLIIQILAMIAEQERTESKRRQAQGIKIAKANGVYKGRPKLYSADTKDPQRRLVYKSIVQDLENGVAISKIAKDHNVTRQTIYRIKEDSAINID
SIO_010081: J9537_RS20340
subclass of: SO_0000673
so part of: J9537_RS20340
location: 3705..4319
location: region:3705-4319:1
so has part: feature:3705-4319:1:exon

WP_218257689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705-4319:1:exon

J9537_RS20750
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20750
pseudo: true
so part of: sequence
location: complement(4486..4697)
location: region:4486-4697:-1
so has part: feature:4486-4697:-1:exon
subclass of: SO_0000010

71776635
type: Gene
SIO_000068: ncbigene

position:4486:-1
position: 4486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4697:-1
position: 4697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4486-4697:-1:exon

J9537_RS20750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002311006.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: J9537_RS20750
subclass of: SO_0000673
so part of: J9537_RS20750
location: complement(4486..4697)
location: region:4486-4697:-1
so has part: feature:4486-4697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4486-4697:-1:exon

J9537_RS20345
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20345
old locus tag: J9537_20345
so part of: sequence
location: complement(4767..5864)
location: region:4767-5864:-1
so has part: feature:4767-5864:-1:exon
subclass of: SO_0000010

67042567
type: Gene
SIO_000068: ncbigene

position:4767:-1
position: 4767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5864:-1
position: 5864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4767-5864:-1:exon

J9537_RS20345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20345
old locus tag: J9537_20345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKKNNELYALEKAIQIGKSKHSVTKKIASRLSGDFIYREIEERPDFVKKTFQNDRRDECIVGIEHFRVDHLSLQKKDGRVGSTGIMHNIESKSVFNRWNSKIGESPEIDLAAINDIQNLIWNQFKRVNNTDYPTFISSFKYSLNKHMAKVESYREELKKIANGKKIELAFLIEVHSEFKNKYLTNKRGTKKSLTGIMPMFNDVVEMLERIDSKEVDYIILLLCETQINENTDVIAFKTGDIYKQLIKQKKYIYEYAGKDFFKQAFSGSSENLESKNRVYHKDDDIIMDFNYDKFNQDDRQQLEDIFRCCERVRSFEKQGKNYITDVSVQAAIDIYREIIFENRSISKDIIKERENEFFNKYLN
SIO_010081: J9537_RS20345
subclass of: SO_0000673
so part of: J9537_RS20345
location: complement(4767..5864)
location: region:4767-5864:-1
so has part: feature:4767-5864:-1:exon

WP_160806153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4767-5864:-1:exon

J9537_RS20350
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
gene: dfrG
locus tag: J9537_RS20350
old locus tag: J9537_20350
so part of: sequence
location: 6503..7000
location: region:6503-7000:1
so has part: feature:6503-7000:1:exon
subclass of: SO_0000010

67042568
type: Gene
SIO_000068: ncbigene

position:6503:1
position: 6503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7000:1
position: 7000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6503-7000:1:exon

J9537_RS20350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
gene: dfrG
locus tag: J9537_RS20350
old locus tag: J9537_20350
EC number: 1.5.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000868795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trimethoprim-resistant dihydrofolate reductase DfrG
translation: MKVSLIAAMDKNRVIGKENDIPWRIPKDWEYVKNTTKGHPIILGRKNLESIGRALPDRRNIILTRDKGFTFNGCEIVHSIEDVFELCKNEEEIFIFGGEQIYNLFFPYVEKMYITKIHHEFEGDTFFPEVNYEEWNEVFAQKGIKNDKNPYNYYFHVYERKNLLS
SIO_010081: J9537_RS20350
subclass of: SO_0000673
so part of: J9537_RS20350
location: 6503..7000
location: region:6503-7000:1
so has part: feature:6503-7000:1:exon

WP_000868795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6503-7000:1:exon

J9537_RS20355
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20355
old locus tag: J9537_20355
so part of: sequence
location: complement(7072..9024)
location: region:7072-9024:-1
so has part: feature:7072-9024:-1:exon
subclass of: SO_0000010

67042569
type: Gene
SIO_000068: ncbigene

position:7072:-1
position: 7072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9024:-1
position: 9024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7072-9024:-1:exon

J9537_RS20355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20355
old locus tag: J9537_20355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017431446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLKRLATKEDEIVDVKIPISNEELKDRAKQYDLLTPKRFATRYNKMLFLPTSFKWNGSEYPIQYNYCINPFCCNFGKEQHKFKDVKGKPSRYKMTGSSKDKGHKGMYCNDNPIGRGVSQNCTVTPLSNWSVVEEIKRLIEINSIQDVEPDYQFHKEGCSEEESTPFNEPKQFYKRGKSRGKSQRYQCKACKKFTNVLPKREETTTYHQQKNTILPMFAKMVVGRVSVSRTCDILGIGVGTYYHKLEWLYRRCLEFLERYETQPLQTKKFNEMWLNTDKMHYYLNNVRKKGQGSKKYTGFEDLNMQTYIVVSAEVLSRYVFRSDVAYDWNISMDELNEDTRKFKEDHLNTFSRKNDRLDWSYYPQEPSANDSENRNAYLHELGKITNRSRFVDGLNVDAPYTTTAHYWLIKQMVNADEWRMISDDDFSIRNAFYRVFTKELRLSDAHHFICQVNKTKSRKQCLKEFGQAKAELLDWGDIRGFKTKFLRTLASHYLTELLTSHQFHEEAISKDGERYRKYADNPIKHPLATKDKGFYSVDCRTDLSALEPNEIAKMLLNVNDHSTNSFIQQIRRYISSLERPLTTARGDKKSYIYANFNPKYAQFAITILRTYYNFCRPFKSADKKVLTPAQRLGITDKQFDWKDIIYFK
SIO_010081: J9537_RS20355
subclass of: SO_0000673
so part of: J9537_RS20355
location: complement(7072..9024)
location: region:7072-9024:-1
so has part: feature:7072-9024:-1:exon

WP_000163792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7072-9024:-1:exon

J9537_RS20360
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20360
old locus tag: J9537_20360
so part of: sequence
location: complement(9031..9315)
location: region:9031-9315:-1
so has part: feature:9031-9315:-1:exon
subclass of: SO_0000010

67042570
type: Gene
SIO_000068: ncbigene

position:9031:-1
position: 9031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9315:-1
position: 9315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9031-9315:-1:exon

J9537_RS20360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20360
old locus tag: J9537_20360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000922261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKWLQFTKQKGVHFPMQFLEPKNKNAKSVDWEISEQVRVIVKQYAEYAERTESEAVDEFLLNILDDKKFIEWIANKRSNKRIVEKMGIKDRVG
SIO_010081: J9537_RS20360
subclass of: SO_0000673
so part of: J9537_RS20360
location: complement(9031..9315)
location: region:9031-9315:-1
so has part: feature:9031-9315:-1:exon

WP_000922261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9031-9315:-1:exon

J9537_RS20365
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20365
old locus tag: J9537_20365
pseudo: true
so part of: sequence
location: complement(9508..9729)
location: region:9508-9729:-1
so has part: feature:9508-9729:-1:exon
subclass of: SO_0000010

67042571
type: Gene
SIO_000068: ncbigene

position:9508:-1
position: 9508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9729:-1
position: 9729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9508-9729:-1:exon

J9537_RS20365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20365
old locus tag: J9537_20365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002311006.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: J9537_RS20365
subclass of: SO_0000673
so part of: J9537_RS20365
location: complement(9508..9729)
location: region:9508-9729:-1
so has part: feature:9508-9729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9508-9729:-1:exon

J9537_RS20370
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20370
old locus tag: J9537_20370
so part of: sequence
location: complement(10303..11955)
location: region:10303-11955:-1
so has part: feature:10303-11955:-1:exon
subclass of: SO_0000010

67042572
type: Gene
SIO_000068: ncbigene

position:10303:-1
position: 10303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11955:-1
position: 11955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10303-11955:-1:exon

J9537_RS20370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20370
old locus tag: J9537_20370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016618837.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MMKIDSFFNVADKSNYYLGMISQVNRSYSTIQIENLSLLSYRKLRTDILSPNTINFYVLIDSSNGLFFGEIFQSKVPNSDSVHEMLTNGLQEKIFPEISIDILGYIPLGEKYFKLNGTNTVGITDKVYIANEKAIELFIESIEVDPEREKQMSYFANLAFSSQSYPIKLQPQTLFNRHLMTVGTTNSGKSTSALSILDKLINDKIRTLIIDPTGEYCDSFTKEEVDKYILGEDAFISSSALSMQQWSILFETNDGTQPAVLASAISSLRYQKKNNLSGIYEKFEKKVDVVTQHMASLSPSDKEFEVCFLSEQVAKEAIKREKRGKDYYFIYDDFNFNSNQYLVQKIDYKLSNTSFLNFFNSDNQGLLDIVDYWSSNDTRKSLYINTSRIGTTDEVGGMIVDLITNHLINLSKDKINPFIIFIDEIHRYTKSVSNEGFSFCTGLNIIAREGRKKGIFLFLTTQNPNDVDKILLGQIGTLLVHRLTAPDELKAIQNHLSENQIGQIKKLNTGEAVLTSINLLKDLYITVSKCSRSHNNNTPSLLYNSKIDAE
SIO_010081: J9537_RS20370
subclass of: SO_0000673
so part of: J9537_RS20370
location: complement(10303..11955)
location: region:10303-11955:-1
so has part: feature:10303-11955:-1:exon

WP_125395868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10303-11955:-1:exon

J9537_RS20375
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20375
old locus tag: J9537_20375
so part of: sequence
location: complement(11942..13315)
location: region:11942-13315:-1
so has part: feature:11942-13315:-1:exon
subclass of: SO_0000010

67042573
type: Gene
SIO_000068: ncbigene

position:11942:-1
position: 11942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13315:-1
position: 13315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11942-13315:-1:exon

J9537_RS20375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20375
old locus tag: J9537_20375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002281263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MFFFFFDEVSNPKESQIEYHYLSQSSKFGIEKNDSGVTNFYDSSGILEKQHLTDDSQSQFQEIDFKRLISEKIRKTVYGEKYSNIVFLAGAGASVAPDLNPKYGKTVKMIAEDVYLKLHEIDDLYTLEQLAEKCKYNDGYILARDQIKAEHIPQLADNFNLEDFLSTLFHYRPYVPDNDKEKFNSTIEKILLLIKENTTYSYDSKVLKHGALLNLLSNLSGKDGNKFSVITTNYDDLFEQAAAENNFVIFDGFNFTSVPKFDSDIFEWNLVKEAQNIKTREVEFKDKTFNLVKIHGSLTWEKQDNGDILRKDKHSIIDTDKMVIVFPSSDKFAQSYQEPYFELFAKFQDLIKRPNTLLISSGFSFADDHISQMITQALKNNSSLKLLVTDFNIDPNREWDKEDNRYIEFDEIDSKYNQNWAGLIRLMCDGYPISFLKATMNSDLVDYLSGRYLNDEN
SIO_010081: J9537_RS20375
subclass of: SO_0000673
so part of: J9537_RS20375
location: complement(11942..13315)
location: region:11942-13315:-1
so has part: feature:11942-13315:-1:exon

WP_125395866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11942-13315:-1:exon

J9537_RS20380
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20380
old locus tag: J9537_20380
so part of: sequence
location: complement(13694..13960)
location: region:13694-13960:-1
so has part: feature:13694-13960:-1:exon
subclass of: SO_0000010

67042574
type: Gene
SIO_000068: ncbigene

position:13694:-1
position: 13694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13960:-1
position: 13960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13694-13960:-1:exon

J9537_RS20380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20380
old locus tag: J9537_20380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019722544.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Txe/YoeB family addiction module toxin
translation: MGYNVKIKKNARKDLPKLKSVNLASKFDELIKVIKENPFQTPPPYEKLTGLPYYSRRLNIKHRLVYSVEEESKTITILSVWSHYERGL
SIO_010081: J9537_RS20380
subclass of: SO_0000673
so part of: J9537_RS20380
location: complement(13694..13960)
location: region:13694-13960:-1
so has part: feature:13694-13960:-1:exon

WP_125395864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13694-13960:-1:exon

J9537_RS20385
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20385
old locus tag: J9537_20385
so part of: sequence
location: complement(13945..14196)
location: region:13945-14196:-1
so has part: feature:13945-14196:-1:exon
subclass of: SO_0000010

67042575
type: Gene
SIO_000068: ncbigene

position:13945:-1
position: 13945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14196:-1
position: 14196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13945-14196:-1:exon

J9537_RS20385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20385
old locus tag: J9537_20385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016621797.1
GO component: GO:0110001 - toxin-antitoxin complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MEVITPTNARKNLYGIIKHVVSDSQPVEIASTKEEESVIMISKSDWNSLQETIYLQNAGVLDRIKHFDNEESEDLGEIDWDTM
SIO_010081: J9537_RS20385
subclass of: SO_0000673
so part of: J9537_RS20385
location: complement(13945..14196)
location: region:13945-14196:-1
so has part: feature:13945-14196:-1:exon

WP_125395862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13945-14196:-1:exon

J9537_RS20390
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20390
old locus tag: J9537_20390
so part of: sequence
location: complement(14359..14730)
location: region:14359-14730:-1
so has part: feature:14359-14730:-1:exon
subclass of: SO_0000010

67042576
type: Gene
SIO_000068: ncbigene

position:14359:-1
position: 14359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14730:-1
position: 14730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14359-14730:-1:exon

J9537_RS20390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20390
old locus tag: J9537_20390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016629602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDNVKPGFFSKQKPDNSYKEIPKPKSAFTSDNTDLLENIHPEEDVLKINNKSLGIPAIVWCEFTALLDTTDNDYTYELLEELIHERTARFDHNQKTTYNRILERKKDQERERIYKKEKRKKI
SIO_010081: J9537_RS20390
subclass of: SO_0000673
so part of: J9537_RS20390
location: complement(14359..14730)
location: region:14359-14730:-1
so has part: feature:14359-14730:-1:exon

WP_125395860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14359-14730:-1:exon

J9537_RS20395
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20395
old locus tag: J9537_20395
so part of: sequence
location: complement(14732..15643)
location: region:14732-15643:-1
so has part: feature:14732-15643:-1:exon
subclass of: SO_0000010

67042577
type: Gene
SIO_000068: ncbigene

position:14732:-1
position: 14732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15643:-1
position: 15643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14732-15643:-1:exon

J9537_RS20395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20395
old locus tag: J9537_20395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005237640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MELSQENLKIVFEYRNVVRRPLTITVANSKGGVGKTTIIRYLSYVLANMGFKVLVVDADPQSNTTKTMLLTKNYHSKDDDIFIIEKTMLAGIVERDLKQLVLPIIENLDCIPSHIDFKNFPKYLTKLYGDAIEGIDADYIEVEKNRISVLKDLLEPVKPEYDFVLIDTPPTMSDFTRNAAYASDYIIMAFQTQSDSLDGVEDYISEEVTPLVEKFDCKTEIVGILPNQLSKGSIDRQVVNDAIEKFGDQNLFDNILPHVKRVQTTPRTGLNTDTYWDKLAYEEVFVPLAKDFIHRIKLFEGEN
SIO_010081: J9537_RS20395
subclass of: SO_0000673
so part of: J9537_RS20395
location: complement(14732..15643)
location: region:14732-15643:-1
so has part: feature:14732-15643:-1:exon

WP_002333825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14732-15643:-1:exon

J9537_RS20400
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20400
old locus tag: J9537_20400
so part of: sequence
location: 16196..17695
location: region:16196-17695:1
so has part: feature:16196-17695:1:exon
subclass of: SO_0000010

67042578
type: Gene
SIO_000068: ncbigene

position:16196:1
position: 16196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17695:1
position: 17695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16196-17695:1:exon

J9537_RS20400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20400
old locus tag: J9537_20400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782321.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MAASLDVVYSTVLQNGIRKFKYKNSHLKPVSFSDQSGKGAIFAYRSKEHMIEGIGLVITSEEGVIENNNRFTHWTPNVFRYGTYADEARMFTKGHSEDNLRQINTFFVDFDTLDPNFDYGEIILASHEIGFMPTMILRTPHGFQAFYVLDKPAYVTKKSNFKVINVAKMISKNLRNKFSNDYRFPVDVNANHFGITRMPSEENVLFFEPQYRYSFEEWIDWSMREDADKKAEIKNVFVLPSTQEFRQVDEPWFQLLLKSQKIQGEKGVYGRNNVIFTLSLAYFSSGYEVEACELTMLEFNDRLANPLSDRELTRIIRSAYSGKYQAAHREKIVLLCQEWVDVNLSEEQLFNKKRGWWKFKKERAVRKYSHSHEWAEDLLSYLNEQSYEEQPYIISTKKDLTESLKIPKRSLDKVLKQLKEENKIHFRVRAGRNGGIMLASIHGLMRSVIRLKKESQGAYFAAISEAFGREYMFIQTALKRLIEPNKIGVQTDLFMIDTG
SIO_010081: J9537_RS20400
subclass of: SO_0000673
so part of: J9537_RS20400
location: 16196..17695
location: region:16196-17695:1
so has part: feature:16196-17695:1:exon

WP_193809672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16196-17695:1:exon

J9537_RS20405
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20405
old locus tag: J9537_20405
so part of: sequence
location: 17832..18119
location: region:17832-18119:1
so has part: feature:17832-18119:1:exon
subclass of: SO_0000010

67042579
type: Gene
SIO_000068: ncbigene

position:17832:1
position: 17832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18119:1
position: 18119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17832-18119:1:exon

J9537_RS20405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20405
old locus tag: J9537_20405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002333827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSINTFVYPYPINVFIISRLGMTVEQFCELHGYKQSTVASWVTRNRAVKTLPCDFLYCLSLSSGWSMDGVYRHLLVLEEKFLKSMDPKKKKEQVN
SIO_010081: J9537_RS20405
subclass of: SO_0000673
so part of: J9537_RS20405
location: 17832..18119
location: region:17832-18119:1
so has part: feature:17832-18119:1:exon

WP_010782322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17832-18119:1:exon

J9537_RS20410
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20410
old locus tag: J9537_20410
pseudo: true
so part of: sequence
location: complement(18285..>18622)
location: region:18285-18622:-1
so has part: feature:18285-18622:-1:exon
subclass of: SO_0000010

67042580
type: Gene
SIO_000068: ncbigene

position:18285:-1
position: 18285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18622:-1
position: 18622
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18285-18622:-1:exon

J9537_RS20410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20410
old locus tag: J9537_20410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: J9537_RS20410
subclass of: SO_0000673
so part of: J9537_RS20410
location: complement(18285..>18622)
location: region:18285-18622:-1
so has part: feature:18285-18622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18285-18622:-1:exon

J9537_RS20415
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20415
old locus tag: J9537_20415
so part of: sequence
location: 18570..18779
location: region:18570-18779:1
so has part: feature:18570-18779:1:exon
subclass of: SO_0000010

67042581
type: Gene
SIO_000068: ncbigene

position:18570:1
position: 18570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18779:1
position: 18779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18570-18779:1:exon

J9537_RS20415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20415
old locus tag: J9537_20415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTTFGSSNCFTNRLRKALLLSIIKVKKEEKESYIKALTNSFDLEDIFIQETLNKLAERPQNGHTTRFV
SIO_010081: J9537_RS20415
subclass of: SO_0000673
so part of: J9537_RS20415
location: 18570..18779
location: region:18570-18779:1
so has part: feature:18570-18779:1:exon

WP_218257691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18570-18779:1:exon

J9537_RS20420
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20420
old locus tag: J9537_20420
so part of: sequence
location: 19143..19313
location: region:19143-19313:1
so has part: feature:19143-19313:1:exon
subclass of: SO_0000010

67042582
type: Gene
SIO_000068: ncbigene

position:19143:1
position: 19143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19313:1
position: 19313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19143-19313:1:exon

J9537_RS20420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20420
old locus tag: J9537_20420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000713595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFIYRVLENDEVVAIFNEQQYAQDFIAYEKTISDKQFEIEKVDIADWLLQPREF
SIO_010081: J9537_RS20420
subclass of: SO_0000673
so part of: J9537_RS20420
location: 19143..19313
location: region:19143-19313:1
so has part: feature:19143-19313:1:exon

WP_000713595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19143-19313:1:exon

J9537_RS20425
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20425
old locus tag: J9537_20425
so part of: sequence
location: 19327..19929
location: region:19327-19929:1
so has part: feature:19327-19929:1:exon
subclass of: SO_0000010

67042583
type: Gene
SIO_000068: ncbigene

position:19327:1
position: 19327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19929:1
position: 19929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19327-19929:1:exon

J9537_RS20425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20425
old locus tag: J9537_20425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002333458.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQNLDRQLQALQGVSKVFSDKASGQSVERPQLQAMLNYIREGDIVIVTELDRLGRNNKELTELMNQIQIKGATLEVLNLPSMTGIEDENLRRLINNLVIELYKYQAESERKRIKERQAQGIEIAKKKGKFKGRQPKFKENDPRLQHAFDLFLNGCSDKEVEEQTGINRRTFRRYRSRYNVTVDQRKKQ
SIO_010081: J9537_RS20425
subclass of: SO_0000673
so part of: J9537_RS20425
location: 19327..19929
location: region:19327-19929:1
so has part: feature:19327-19929:1:exon

WP_218257685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19327-19929:1:exon

J9537_RS20430
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20430
old locus tag: J9537_20430
pseudo: true
so part of: sequence
location: 19945..>20622
location: region:19945-20622:1
so has part: feature:19945-20622:1:exon
subclass of: SO_0000010

67042584
type: Gene
SIO_000068: ncbigene

position:19945:1
position: 19945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20622:1
position: 20622
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19945-20622:1:exon

J9537_RS20430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20430
old locus tag: J9537_20430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000108743.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase
SIO_010081: J9537_RS20430
subclass of: SO_0000673
so part of: J9537_RS20430
location: 19945..>20622
location: region:19945-20622:1
so has part: feature:19945-20622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19945-20622:1:exon

J9537_RS20755
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20755
so part of: sequence
location: 20933..21430
location: region:20933-21430:1
so has part: feature:20933-21430:1:exon
subclass of: SO_0000010

71776636
type: Gene
SIO_000068: ncbigene

position:20933:1
position: 20933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21430:1
position: 21430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20933-21430:1:exon

J9537_RS20755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DNA recombinase
translation: MLFLRDGEIKATLTTMMNKLAFSHKLILEPLFKSVSQIDEESDRERMDAIDKLMEQLLEERNTLIALMSKGFLEPALFNQERNVLDSEIKNLTTEKTNLVTNSASGVLRANEIKDLINYVSADNFNGDYTEELFEEFVVNIIVNSRDELTFNLKCGLSLKEKVVR
SIO_010081: J9537_RS20755
subclass of: SO_0000673
so part of: J9537_RS20755
location: 20933..21430
location: region:20933-21430:1
so has part: feature:20933-21430:1:exon

WP_002327635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20933-21430:1:exon

J9537_RS20440
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20440
old locus tag: J9537_20440
so part of: sequence
location: 21431..21847
location: region:21431-21847:1
so has part: feature:21431-21847:1:exon
subclass of: SO_0000010

67042586
type: Gene
SIO_000068: ncbigene

position:21431:1
position: 21431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21847:1
position: 21847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21431-21847:1:exon

J9537_RS20440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20440
old locus tag: J9537_20440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000323438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase
translation: MAYIPYGYKIQDGVVTVDEKAAGQVKVFFEKYISGLSLTVAGEQAGIEKTHSVMGRILKNVNYLGNDTYPAIIDKEIFDKAEEVRDKRAKDLGRVVELAAFTSPPPKERFKMKKADNKMPVDPFERAEYLYSLIESEE
SIO_010081: J9537_RS20440
subclass of: SO_0000673
so part of: J9537_RS20440
location: 21431..21847
location: region:21431-21847:1
so has part: feature:21431-21847:1:exon

WP_000323438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21431-21847:1:exon

J9537_RS20445
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20445
old locus tag: J9537_20445
so part of: sequence
location: 21849..23411
location: region:21849-23411:1
so has part: feature:21849-23411:1:exon
subclass of: SO_0000010

67042587
type: Gene
SIO_000068: ncbigene

position:21849:1
position: 21849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23411:1
position: 23411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21849-23411:1:exon

J9537_RS20445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20445
old locus tag: J9537_20445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000136908.1
GO function: GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI
SIO_010081: J9537_RS20445
subclass of: SO_0000673
so part of: J9537_RS20445
location: 21849..23411
location: region:21849-23411:1
so has part: feature:21849-23411:1:exon

WP_000136908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21849-23411:1:exon

J9537_RS20450
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20450
old locus tag: J9537_20450
so part of: sequence
location: 23554..23778
location: region:23554-23778:1
so has part: feature:23554-23778:1:exon
subclass of: SO_0000010

67042588
type: Gene
SIO_000068: ncbigene

position:23554:1
position: 23554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23778:1
position: 23778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23554-23778:1:exon

J9537_RS20450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20450
old locus tag: J9537_20450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018579902.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTTAEMIKELCEQMNISVSELARRIGQTPQNFNKKLQRETVTLDELKAIADVLGVKFVQAFILPDGEEIKISNE
SIO_010081: J9537_RS20450
subclass of: SO_0000673
so part of: J9537_RS20450
location: 23554..23778
location: region:23554-23778:1
so has part: feature:23554-23778:1:exon

WP_000205227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23554-23778:1:exon

J9537_RS20455
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20455
old locus tag: J9537_20455
so part of: sequence
location: 23793..24662
location: region:23793-24662:1
so has part: feature:23793-24662:1:exon
subclass of: SO_0000010

67042589
type: Gene
SIO_000068: ncbigene

position:23793:1
position: 23793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24662:1
position: 24662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23793-24662:1:exon

J9537_RS20455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20455
old locus tag: J9537_20455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002328890.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MVGNVIQIVTEKLSSLPFIEGIVLGGSRARGTHTENSDIDIGIYYNSDSFDLTAINQIATELDDKNRNNLVVPPGAWGDWINGGGWLFINGYHVDLILRDIKRVEQIIKDTEQGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAEIYPTALKKSLMNFFIFEAEFSLMFVKANAGVEDKYYIAGHVFRIISCLNQVLFACNNAYCINEKKAIKLLETFEYKPEKYAERVNHIFEVLGLSLFECYDMTEKLYKEVNEIVSEINNFLNEESSDERKQI
SIO_010081: J9537_RS20455
subclass of: SO_0000673
so part of: J9537_RS20455
location: 23793..24662
location: region:23793-24662:1
so has part: feature:23793-24662:1:exon

WP_000233000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23793-24662:1:exon

J9537_RS20460
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20460
old locus tag: J9537_20460
so part of: sequence
location: 24643..25377
location: region:24643-25377:1
so has part: feature:24643-25377:1:exon
subclass of: SO_0000010

67042590
type: Gene
SIO_000068: ncbigene

position:24643:1
position: 24643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25377:1
position: 25377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24643-25377:1:exon

J9537_RS20460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20460
old locus tag: J9537_20460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016250180.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0032259 - methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKENKYDDNIFFQKYSQMSRSQKGLAGAGEWETLKKMLPDFKGKRVLDLGCGYGWHCIYAMENGASSVVGVDISHKMLEVAKGKTHFPQIEYECCAIEDVDFPEESFDVILSSLAFHYVADYENLIKKIYRMLKAGGNLVFTVEHPVFTAHGTQDWYYNEKGEILHFPVDNYYYEGKRTAMFLEEKVTKYHRTLTTYLNTLLSNSFIINQIVEPQPPENMMDIPGMADEMRRPMMLIVSAKKKM
SIO_010081: J9537_RS20460
subclass of: SO_0000673
so part of: J9537_RS20460
location: 24643..25377
location: region:24643-25377:1
so has part: feature:24643-25377:1:exon

WP_000662263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24643-25377:1:exon

J9537_RS20465
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20465
old locus tag: J9537_20465
so part of: sequence
location: 25410..26273
location: region:25410-26273:1
so has part: feature:25410-26273:1:exon
subclass of: SO_0000010

67042591
type: Gene
SIO_000068: ncbigene

position:25410:1
position: 25410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26273:1
position: 26273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25410-26273:1:exon

J9537_RS20465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20465
old locus tag: J9537_20465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003109014.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside nucleotidyltransferase ANT(6)-Ia
translation: MRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYDITYFVSDIEPFISNDDWLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLTLLPLEELDNYLKGDKLIKVLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNVTPYVIKGLCRKEILFAIDHLNQILRFELLRMMSWKVGIKTEFSLSVGKNYKYINKYIDEDLWNRLLSTYRMDSYENIWKSLFICHQLFREVSKEVAELLGFDYPEYGKNITRYTEDMYKKYVENDYF
SIO_010081: J9537_RS20465
subclass of: SO_0000673
so part of: J9537_RS20465
location: 25410..26273
location: region:25410-26273:1
so has part: feature:25410-26273:1:exon

WP_002294505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25410-26273:1:exon

J9537_RS20470
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20470
old locus tag: J9537_20470
so part of: sequence
location: 26317..26844
location: region:26317-26844:1
so has part: feature:26317-26844:1:exon
subclass of: SO_0000010

67042592
type: Gene
SIO_000068: ncbigene

position:26317:1
position: 26317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26844:1
position: 26844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26317-26844:1:exon

J9537_RS20470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20470
old locus tag: J9537_20470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002294507.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MESTDVINEIRGILPRNSIGKYDLLTIFTHKTVFDKIVKVLSLDFQNKVDYVAAPEAIGWILGTAIAKELGVGFIGVRKGDKLPYAKEEIISTHFTDYSGQDKSFEISKSSIVRNKRVLIVDDWIETGSQMKALIALLEKLDCSIIGLATIGIDINEVTQKWIDSSFVAYIGSNI
SIO_010081: J9537_RS20470
subclass of: SO_0000673
so part of: J9537_RS20470
location: 26317..26844
location: region:26317-26844:1
so has part: feature:26317-26844:1:exon

WP_002294507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26317-26844:1:exon

J9537_RS20475
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20475
old locus tag: J9537_20475
so part of: sequence
location: 26976..27785
location: region:26976-27785:1
so has part: feature:26976-27785:1:exon
subclass of: SO_0000010

67042593
type: Gene
SIO_000068: ncbigene

position:26976:1
position: 26976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27785:1
position: 27785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26976-27785:1:exon

J9537_RS20475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20475
old locus tag: J9537_20475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002294509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ANT(9) family aminoglycoside nucleotidyltransferase Spw
translation: MSIDLSNKKIPKEAIQALKTIAELLDNMLIGVYLYGSAVMGGLRMNSDVDILVITNQSLSEKTRRNLTNRLMLISGKIGNIKDMRPLEVTVINQKDIVPWHFPPKYEFMYGEWLREQFEKGEIPESTYDPDLAILLAQLRKNSINLLGPKATEVIEPVPMTDIRKAIKESLPGLIASINGDERNVILTLARMWLTASTGEIRSKDLAAEWAIPQLPDEHATLLNKAREAYLGECVDKWEGMESEVAELVNHMKKSIESSLNIQLPFRIV
SIO_010081: J9537_RS20475
subclass of: SO_0000673
so part of: J9537_RS20475
location: 26976..27785
location: region:26976-27785:1
so has part: feature:26976-27785:1:exon

WP_002294509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26976-27785:1:exon

J9537_RS20480
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20480
old locus tag: J9537_20480
so part of: sequence
location: 27964..28254
location: region:27964-28254:1
so has part: feature:27964-28254:1:exon
subclass of: SO_0000010

67042594
type: Gene
SIO_000068: ncbigene

position:27964:1
position: 27964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28254:1
position: 28254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27964-28254:1:exon

J9537_RS20480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20480
old locus tag: J9537_20480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002294510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHKSADDFISVKMEYADDRKIQPDRITYRLIQEYIEEKYGFKVHTANIAEVKRNLGLPMYDAPNAVEELKRPYKPAPEYKVEAIKDALRHFKVID
SIO_010081: J9537_RS20480
subclass of: SO_0000673
so part of: J9537_RS20480
location: 27964..28254
location: region:27964-28254:1
so has part: feature:27964-28254:1:exon

WP_010733534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27964-28254:1:exon

J9537_RS20485
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20485
old locus tag: J9537_20485
so part of: sequence
location: complement(28305..28763)
location: region:28305-28763:-1
so has part: feature:28305-28763:-1:exon
subclass of: SO_0000010

67042595
type: Gene
SIO_000068: ncbigene

position:28305:-1
position: 28305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28763:-1
position: 28763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28305-28763:-1:exon

J9537_RS20485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20485
old locus tag: J9537_20485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002325145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTMCPRCLELYSEIWSKPCCKCADKTIPVDIELINVVQMLLTRGFDVSYATCYPDKEQGEIEAMEIEIHFRELYPQALFDGLPPDWIVIDEYPVLGGKVLDEPVDILTCAIEYRFEESIHIQKDIAISNLETWLEEKDPQSCRAILTLAGF
SIO_010081: J9537_RS20485
subclass of: SO_0000673
so part of: J9537_RS20485
location: complement(28305..28763)
location: region:28305-28763:-1
so has part: feature:28305-28763:-1:exon

WP_002325145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28305-28763:-1:exon

J9537_RS20490
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20490
old locus tag: J9537_20490
pseudo: true
so part of: sequence
location: <28846..29394
location: region:28846-29394:1
so has part: feature:28846-29394:1:exon
subclass of: SO_0000010

67042596
type: Gene
SIO_000068: ncbigene

position:28846:1
position: 28846
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:29394:1
position: 29394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28846-29394:1:exon

J9537_RS20490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20490
old locus tag: J9537_20490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000301253.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase zinc beta ribbon domain-containing protein
SIO_010081: J9537_RS20490
subclass of: SO_0000673
so part of: J9537_RS20490
location: <28846..29394
location: region:28846-29394:1
so has part: feature:28846-29394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28846-29394:1:exon

J9537_RS20495
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
alternative label: lsaE
gene: lsa(E)
locus tag: J9537_RS20495
old locus tag: J9537_20495
gene synonym: lsaE
so part of: sequence
location: 29455..30939
location: region:29455-30939:1
so has part: feature:29455-30939:1:exon
subclass of: SO_0000010

67042597
type: Gene
SIO_000068: ncbigene

position:29455:1
position: 29455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30939:1
position: 30939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29455-30939:1:exon

J9537_RS20495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
alternative label: lsaE
gene: lsa(E)
locus tag: J9537_RS20495
old locus tag: J9537_20495
gene synonym: lsaE
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002294513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC-F type ribosomal protection protein Lsa(E)
translation: MSLINVSNLTFSYEGSYDNIFENVSFQIDTDWKLGFIGRNGRGKTTFLNLLLGKYAYSGNISSTVKFEYFPYDVEDKSLYTIEVMKSICTECMDWEIFREISLLDVQEDALYRPFNTLSNGEQTKVLLAALFLTASCFLLIDEPTNHLDIDARNVVQNYLKRKKGFILVSHDRSLLDQCVDHILSINKTNIEIQKGNFTSWWENKTLQDNFELAENKKLLKEIGRLSYAAKRSSNWSNKVEKSKYGTTNSGSKLDKGYVGHKAAKAMKRAKNIESRHQEAVLQKSELLHNIEQYDDLKISPLEFHKECLIEANDLSLSYGDKEVCSNLNFRVNIGDRVAIIGKNGSGKSSILKLINGDDIKFTGNFMLASGLKISYISQDTSYLKGNLSEFAYNNKIDETLFKTILRKLDFNREQFDKNMVDFSAGQKKKVLIAKSLCESAHLYIWDEPLNYIDIFSRIQIEKMILEYCPTLLFVEHDDAFCNNICTKNINLGL
SIO_010081: J9537_RS20495
subclass of: SO_0000673
so part of: J9537_RS20495
location: 29455..30939
location: region:29455-30939:1
so has part: feature:29455-30939:1:exon

WP_002294513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29455-30939:1:exon

J9537_RS20500
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
gene: lnu(B)
locus tag: J9537_RS20500
old locus tag: J9537_20500
so part of: sequence
location: 30993..31796
location: region:30993-31796:1
so has part: feature:30993-31796:1:exon
subclass of: SO_0000010

67042598
type: Gene
SIO_000068: ncbigene

position:30993:1
position: 30993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31796:1
position: 31796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30993-31796:1:exon

J9537_RS20500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
gene: lnu(B)
locus tag: J9537_RS20500
old locus tag: J9537_20500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002294514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lincosamide nucleotidyltransferase Lnu(B)
translation: MLKQKELIANVKNLTESDERITACMMYGSFTKGEGDQYSDIEFYIFLKDSITSNFDSSNWLFDVAPYLMLYKNEYGTEVVIFDNLIRGEFHFLSEKDMNIIPSFKDSGYIPDTKAMLIYDETGQLENYLSEISGARPNRLTEENANFLLCNFSNLWLMGINVLKRGEYARSLELLSQLQKNTLQLIRMAEKNADNWLNMSKNLEKEISLENYKKFAKTTARLDKVELFEAYKNSLLLVMDLQSHLIEQYNLKVTHDILERLLNYISE
SIO_010081: J9537_RS20500
subclass of: SO_0000673
so part of: J9537_RS20500
location: 30993..31796
location: region:30993-31796:1
so has part: feature:30993-31796:1:exon

WP_002294514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30993-31796:1:exon

J9537_RS20505
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20505
old locus tag: J9537_20505
pseudo: true
so part of: sequence
location: <32075..32326
location: region:32075-32326:1
so has part: feature:32075-32326:1:exon
subclass of: SO_0000010

67042599
type: Gene
SIO_000068: ncbigene

position:32075:1
position: 32075
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:32326:1
position: 32326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32075-32326:1:exon

J9537_RS20505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20505
old locus tag: J9537_20505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000627290.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: J9537_RS20505
subclass of: SO_0000673
so part of: J9537_RS20505
location: <32075..32326
location: region:32075-32326:1
so has part: feature:32075-32326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32075-32326:1:exon

J9537_RS20510
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
gene: aph(3')-IIIa
locus tag: J9537_RS20510
old locus tag: J9537_20510
so part of: sequence
location: 32419..33213
location: region:32419-33213:1
so has part: feature:32419-33213:1:exon
subclass of: SO_0000010

67042600
type: Gene
SIO_000068: ncbigene

position:32419:1
position: 32419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33213:1
position: 33213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32419-33213:1:exon

J9537_RS20510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
gene: aph(3')-IIIa
locus tag: J9537_RS20510
old locus tag: J9537_20510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside O-phosphotransferase APH(3')-IIIa
translation: MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF
SIO_010081: J9537_RS20510
subclass of: SO_0000673
so part of: J9537_RS20510
location: 32419..33213
location: region:32419-33213:1
so has part: feature:32419-33213:1:exon

WP_001096887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32419-33213:1:exon

J9537_RS20825
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20825
old locus tag: J9537_20515
pseudo: true
so part of: sequence
location: <33623..33706
location: region:33623-33706:1
so has part: feature:33623-33706:1:exon
subclass of: SO_0000010

80429187
type: Gene
SIO_000068: ncbigene

position:33623:1
position: 33623
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:33706:1
position: 33706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33623-33706:1:exon

J9537_RS20825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20825
old locus tag: J9537_20515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000502600.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MLS leader peptide
SIO_010081: J9537_RS20825
subclass of: SO_0000673
so part of: J9537_RS20825
location: <33623..33706
location: region:33623-33706:1
so has part: feature:33623-33706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33623-33706:1:exon

J9537_RS20520
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20520
old locus tag: J9537_20520
so part of: sequence
location: 33755..33838
location: region:33755-33838:1
so has part: feature:33755-33838:1:exon
subclass of: SO_0000010

67042602
type: Gene
SIO_000068: ncbigene

position:33755:1
position: 33755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33838:1
position: 33838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33755-33838:1:exon

J9537_RS20520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20520
old locus tag: J9537_20520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001814874.1
GO process: GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA methyltransferase attenuation leader peptide
translation: MLVFQMRNVDKTSTVLKQTKNSDYADK
SIO_010081: J9537_RS20520
subclass of: SO_0000673
so part of: J9537_RS20520
location: 33755..33838
location: region:33755-33838:1
so has part: feature:33755-33838:1:exon

WP_001814874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33755-33838:1:exon

J9537_RS20525
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
gene: erm(B)
locus tag: J9537_RS20525
old locus tag: J9537_20525
so part of: sequence
location: 33963..34700
location: region:33963-34700:1
so has part: feature:33963-34700:1:exon
subclass of: SO_0000010

67042603
type: Gene
SIO_000068: ncbigene

position:33963:1
position: 33963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34700:1
position: 34700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33963-34700:1:exon

J9537_RS20525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
gene: erm(B)
locus tag: J9537_RS20525
old locus tag: J9537_20525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011100845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)
translation: MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNIRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTVTYEQVLSIFNSYLLFNGRK
SIO_010081: J9537_RS20525
subclass of: SO_0000673
so part of: J9537_RS20525
location: 33963..34700
location: region:33963-34700:1
so has part: feature:33963-34700:1:exon

WP_001038790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33963-34700:1:exon

J9537_RS20530
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20530
old locus tag: J9537_20530
pseudo: true
so part of: sequence
location: <34870..35130
location: region:34870-35130:1
so has part: feature:34870-35130:1:exon
subclass of: SO_0000010

67042604
type: Gene
SIO_000068: ncbigene

position:34870:1
position: 34870
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35130:1
position: 35130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34870-35130:1:exon

J9537_RS20530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20530
old locus tag: J9537_20530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000108743.1
GO component: GO:0005694 - chromosome [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: topoisomerase DNA-binding C4 zinc finger domain-containing protein
SIO_010081: J9537_RS20530
subclass of: SO_0000673
so part of: J9537_RS20530
location: <34870..35130
location: region:34870-35130:1
so has part: feature:34870-35130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34870-35130:1:exon

J9537_RS20535
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20535
old locus tag: J9537_20535
so part of: sequence
location: 35219..36115
location: region:35219-36115:1
so has part: feature:35219-36115:1:exon
subclass of: SO_0000010

67042605
type: Gene
SIO_000068: ncbigene

position:35219:1
position: 35219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36115:1
position: 36115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35219-36115:1:exon

J9537_RS20535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20535
old locus tag: J9537_20535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002355409.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIQYYYTKKEWGVVMEKEELKILEELRRILNSKNEAIVILNNYFKGGVGKSKLSTMFAYLTDKFNLKVLMIDKDLQATLTKDLAKTFKVELPRVNFYEGLKNGNLASSIVHLTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSTTIKSNLEELYKQHKEDNLVFQNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYENVFFEMLERIIQLENEKE
SIO_010081: J9537_RS20535
subclass of: SO_0000673
so part of: J9537_RS20535
location: 35219..36115
location: region:35219-36115:1
so has part: feature:35219-36115:1:exon

WP_001809760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35219-36115:1:exon

J9537_RS20540
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20540
old locus tag: J9537_20540
so part of: sequence
location: 36207..36422
location: region:36207-36422:1
so has part: feature:36207-36422:1:exon
subclass of: SO_0000010

67042606
type: Gene
SIO_000068: ncbigene

position:36207:1
position: 36207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36422:1
position: 36422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36207-36422:1:exon

J9537_RS20540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20540
old locus tag: J9537_20540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002401482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-binding protein
translation: MVVGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAKNGGNVKEVMDKALEEYIRKYLPDKL
SIO_010081: J9537_RS20540
subclass of: SO_0000673
so part of: J9537_RS20540
location: 36207..36422
location: region:36207-36422:1
so has part: feature:36207-36422:1:exon

WP_002321610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36207-36422:1:exon

J9537_RS20545
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20545
old locus tag: J9537_20545
so part of: sequence
location: 36439..36711
location: region:36439-36711:1
so has part: feature:36439-36711:1:exon
subclass of: SO_0000010

67042607
type: Gene
SIO_000068: ncbigene

position:36439:1
position: 36439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36711:1
position: 36711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36439-36711:1:exon

J9537_RS20545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20545
old locus tag: J9537_20545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002333002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKEKVA
SIO_010081: J9537_RS20545
subclass of: SO_0000673
so part of: J9537_RS20545
location: 36439..36711
location: region:36439-36711:1
so has part: feature:36439-36711:1:exon

WP_000301765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36439-36711:1:exon

J9537_RS20550
type: Gene
subclass of: SO_0000704
RO_0002162: 71452
locus tag: J9537_RS20550
old locus tag: J9537_20550
so part of: sequence
location: 36713..37576
location: region:36713-37576:1
so has part: feature:36713-37576:1:exon
subclass of: SO_0000010

67042608
type: Gene
SIO_000068: ncbigene

position:36713:1
position: 36713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37576:1
position: 37576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36713-37576:1:exon

J9537_RS20550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 71452
locus tag: J9537_RS20550
old locus tag: J9537_20550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782381.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MANIVNFTDKQFENRLNDNLEELVQGKKAVESPTAFLLGGQPGSGKTSLRSAILEETQGNVIVIDNDTFKQQHPNFDELAKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLERELNRKVSGKEIQPTLERIEQKMVQNQHQETPEFKAIQQKLESLQPPTPPIPKIPKLPGL
SIO_010081: J9537_RS20550
subclass of: SO_0000673
so part of: J9537_RS20550
location: 36713..37576
location: region:36713-37576:1
so has part: feature:36713-37576:1:exon

WP_218257686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36713-37576:1:exon