Bombyx mori strain p50T chromosome 16, Bmori_2016v1.0, whole genome shotgun sequence.
type: Entry
definition: Bombyx mori strain p50T chromosome 16, Bmori_2016v1.0, whole genome shotgun sequence.
sequence version: NC_051373.1
sequence date: 2020-12-02
sequence: sequence
division: CON
label: NC_051373.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA679031
dblink: SAMD00054089
keyword: WGS
keyword: RefSeq
source: Bombyx mori (domestic silkworm)
organism: Bombyx mori
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nBHWX01000016.1.\nAssembly name: Bmori_2016v1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Graduate School of\nAgricultural and Life Sciences, The University of Tokyo on\n2020/10/13. The original whole-genome shotgun project has the\naccession BHWX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Graduate School of Agricultural and Life\n Sciences, The University of Tokyo\nAssembly Method :: HGAP v. 3\nAssembly Name :: Bmori_2016v1.0\nGenome Coverage :: 140x\nSequencing Technology :: PacBio RS II; Illumina HiSeq 2500\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bombyx mori Annotation Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 14337292
topology: linear
so has quality: SO_0000987
location: 1..14337292
location: region:1-14337292:1
RO_0002162: 7091

NC_051373
type: RefSeq
SIO_000068: refseq

PRJNA679031
type: BioProject
SIO_000068: bioproject

SAMD00054089
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14337292:1
position: 14337292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14337292:1:source
so part of: sequence
organism: Bombyx mori
mol type: genomic DNA
strain: p50T
chromosome: 16

7091
type: Taxonomy
SIO_000068: taxonomy

LOC692632
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC692632
note: apolipophorin III; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(33595..41827)
location: region:33595-41827:-1
so has part: feature:33595-41827:-1:exon
subclass of: SO_0000010

692632
type: Gene
SIO_000068: ncbigene

position:33595:-1
position: 33595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41827:-1
position: 41827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33595-41827:-1:exon

LOC692632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC692632
product: apolipophorin III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 386 ESTs, 22 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038016192.1
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33595..33793,34156..34314,34385..34591,34676..34761,41519..41637,41715..41827))
location: region:33595-41827:-1
so has part: feature:41715-41827:-1:exon
so has part: feature:41519-41637:-1:exon
so has part: feature:34676-34761:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33595-33793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41715-41827:-1:exon

position:41715:-1
position: 41715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41519-41637:-1:exon

position:41519:-1
position: 41519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41637:-1
position: 41637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34676-34761:-1:exon

position:34676:-1
position: 34676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34761:-1
position: 34761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34385-34591:-1:exon

position:34385:-1
position: 34385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34591:-1
position: 34591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34156-34314:-1:exon

position:34156:-1
position: 34156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34314:-1
position: 34314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33595-33793:-1:exon

position:33793:-1
position: 33793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC692632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC692632
product: apolipophorin III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 800 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_038016193.1
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33595..33793,34156..34314,34385..34591,34676..35065,41519..41554))
location: region:33595-41554:-1
so has part: feature:41519-41554:-1:exon
so has part: feature:34676-35065:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33595-33793:-1:exon

position:41554:-1
position: 41554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41519-41554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34676-35065:-1:exon

position:35065:-1
position: 35065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33595-33793:-1:exon

LOC692632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC692632
product: apolipophorin III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 798 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_038016194.1
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33595..33793,34156..34314,34385..34591,34676..34879,41519..41552))
location: region:33595-41552:-1
so has part: feature:41519-41552:-1:exon
so has part: feature:34676-34879:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33595-33793:-1:exon

position:41552:-1
position: 41552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41519-41552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34676-34879:-1:exon

position:34879:-1
position: 34879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33595-33793:-1:exon

LOC692632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC692632
product: apolipophorin III
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001043613.2
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33618..33793,34156..34314,34385..34591,34676..34756))
location: region:33618-34756:-1
so has part: feature:34676-34756:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33618-33793:-1:exon

position:33618:-1
position: 33618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34756:-1
position: 34756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34676-34756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33618-33793:-1:exon

LOC692632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC692632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipophorin III isoform X1
translation: MAHLHARSILLMILLYNVDPSSWKPVVDMRCARTRWLVRSGTALRGAAWRGGEGEGAGSQRLRSSVLAPASRVRFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33641..33793,34156..34314,34385..34591,34676..34761,41519..41637,41715..41812))
location: region:33641-41812:-1
so has part: feature:41715-41812:-1:exon
so has part: feature:41519-41637:-1:exon
so has part: feature:34676-34761:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33641-33793:-1:exon

XP_037872120.1
type: Protein
SIO_000068: ncbiprotein

position:33641:-1
position: 33641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41812:-1
position: 41812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41715-41812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41519-41637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34676-34761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33641-33793:-1:exon

LOC692632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC692632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipophorin III isoform X2
translation: MHVVCKQGAGRNKPSGGGRPYRARYQPRRVYIARPGRNQHTLLCVAVRFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33641..33793,34156..34314,34385..34591,34676..34900))
location: region:33641-34900:-1
so has part: feature:34676-34900:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33641-33793:-1:exon

XP_037872121.1
type: Protein
SIO_000068: ncbiprotein

position:34900:-1
position: 34900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34676-34900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33641-33793:-1:exon

LOC692632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC692632
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: apolipophorin III precursor
translation: MAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33641..33793,34156..34314,34385..34591,34676..34717))
location: region:33641-34717:-1
so has part: feature:34676-34717:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33641-33793:-1:exon

NP_001037078.1
type: Protein
SIO_000068: ncbiprotein

position:34717:-1
position: 34717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34676-34717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33641-33793:-1:exon

LOC692632
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 7091
gene: LOC692632
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(34568..34591,34676..34717))
location: region:34568-34717:-1
so has part: feature:34676-34717:-1:exon
so has part: feature:34568-34591:-1:exon

position:34568:-1
position: 34568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34676-34717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34568-34591:-1:exon

LOC692632
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 7091
gene: LOC692632
product: apolipophorin III
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33644..33793,34156..34314,34385..34567))
location: region:33644-34567:-1
so has part: feature:34385-34567:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33644-33793:-1:exon

position:33644:-1
position: 33644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34567:-1
position: 34567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34385-34567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33644-33793:-1:exon

LOC692632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC692632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipophorin III isoform X3
translation: MAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ
SIO_010081: LOC692632
subclass of: SO_0000673
so part of: LOC692632
location: complement(join(33641..33793,34156..34314,34385..34591,34676..34717))
location: region:33641-34717:-1
so has part: feature:34676-34717:-1:exon
so has part: feature:34385-34591:-1:exon
so has part: feature:34156-34314:-1:exon
so has part: feature:33641-33793:-1:exon

XP_037872122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34676-34717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34385-34591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34156-34314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33641-33793:-1:exon

LOC101744804
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(59967..101257)
location: region:59967-101257:-1
so has part: feature:59967-101257:-1:exon
subclass of: SO_0000010

101744804
type: Gene
SIO_000068: ncbigene

position:59967:-1
position: 59967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101257:-1
position: 101257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59967-101257:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_038016518.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59967..61675,90303..90507,101044..101257))
location: region:59967-101257:-1
so has part: feature:101044-101257:-1:exon
so has part: feature:90303-90507:-1:exon
so has part: feature:59967-61675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101044-101257:-1:exon

position:101044:-1
position: 101044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90303-90507:-1:exon

position:90303:-1
position: 90303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90507:-1
position: 90507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59967-61675:-1:exon

position:61675:-1
position: 61675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_038016521.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,101044..101256))
location: region:59976-101256:-1
so has part: feature:101044-101256:-1:exon
so has part: feature:59976-61675:-1:exon

position:59976:-1
position: 59976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101256:-1
position: 101256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101044-101256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_038016524.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,95606..95852))
location: region:59976-95852:-1
so has part: feature:95606-95852:-1:exon
so has part: feature:59976-61675:-1:exon

position:95852:-1
position: 95852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95606-95852:-1:exon

position:95606:-1
position: 95606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_038016522.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,95602..95852))
location: region:59976-95852:-1
so has part: feature:95602-95852:-1:exon
so has part: feature:59976-61675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95602-95852:-1:exon

position:95602:-1
position: 95602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038016519.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,90303..90507,95606..95630))
location: region:59976-95630:-1
so has part: feature:95606-95630:-1:exon
so has part: feature:90303-90507:-1:exon
so has part: feature:59976-61675:-1:exon

position:95630:-1
position: 95630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95606-95630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90303-90507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038016520.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,90303..90507,95602..95620))
location: region:59976-95620:-1
so has part: feature:95602-95620:-1:exon
so has part: feature:90303-90507:-1:exon
so has part: feature:59976-61675:-1:exon

position:95620:-1
position: 95620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95602-95620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90303-90507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744804
product: uncharacterized LOC101744804, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_038016523.1
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(59976..61675,62081..63210))
location: region:59976-63210:-1
so has part: feature:62081-63210:-1:exon
so has part: feature:59976-61675:-1:exon

position:63210:-1
position: 63210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62081-63210:-1:exon

position:62081:-1
position: 62081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59976-61675:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X1
translation: MTDTVMRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(60038..61675,90303..90314))
location: region:60038-90314:-1
so has part: feature:90303-90314:-1:exon
so has part: feature:60038-61675:-1:exon

XP_037872446.1
type: Protein
SIO_000068: ncbiprotein

position:60038:-1
position: 60038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90314:-1
position: 90314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90303-90314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60038-61675:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X1
translation: MTDTVMRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(60038..61675,90303..90314))
location: region:60038-90314:-1
so has part: feature:90303-90314:-1:exon
so has part: feature:60038-61675:-1:exon

XP_037872447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90303-90314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60038-61675:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X1
translation: MTDTVMRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(join(60038..61675,90303..90314))
location: region:60038-90314:-1
so has part: feature:90303-90314:-1:exon
so has part: feature:60038-61675:-1:exon

XP_037872448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90303-90314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60038-61675:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X2
translation: MRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(60038..61672)
location: region:60038-61672:-1
so has part: feature:60038-61672:-1:exon

XP_037872449.1
type: Protein
SIO_000068: ncbiprotein

position:61672:-1
position: 61672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60038-61672:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X2
translation: MRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(60038..61672)
location: region:60038-61672:-1
so has part: feature:60038-61672:-1:exon

XP_037872450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60038-61672:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X2
translation: MRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(60038..61672)
location: region:60038-61672:-1
so has part: feature:60038-61672:-1:exon

XP_037872451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60038-61672:-1:exon

LOC101744804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744804 isoform X2
translation: MRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR
SIO_010081: LOC101744804
subclass of: SO_0000673
so part of: LOC101744804
location: complement(60038..61672)
location: region:60038-61672:-1
so has part: feature:60038-61672:-1:exon

XP_037872452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60038-61672:-1:exon

LOC105842044
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC105842044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140353..158289)
location: region:140353-158289:-1
so has part: feature:140353-158289:-1:exon
subclass of: SO_0000010

105842044
type: Gene
SIO_000068: ncbigene

position:140353:-1
position: 140353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158289:-1
position: 158289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140353-158289:-1:exon

LOC105842044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105842044
product: O-acyltransferase like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038016591.1
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140353..140492,141834..141976,142530..142559,145027..145053,145584..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151624,157854..158289))
location: region:140353-158289:-1
so has part: feature:157854-158289:-1:exon
so has part: feature:151533-151624:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145584-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140353-140492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157854-158289:-1:exon

position:157854:-1
position: 157854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151533-151624:-1:exon

position:151533:-1
position: 151533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151624:-1
position: 151624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151182-151324:-1:exon

position:151182:-1
position: 151182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151324:-1
position: 151324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150088-150412:-1:exon

position:150088:-1
position: 150088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150412:-1
position: 150412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149909-150020:-1:exon

position:149909:-1
position: 149909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150020:-1
position: 150020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149526-149613:-1:exon

position:149526:-1
position: 149526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149613:-1
position: 149613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149134-149294:-1:exon

position:149134:-1
position: 149134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149294:-1
position: 149294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148577-148762:-1:exon

position:148577:-1
position: 148577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148762:-1
position: 148762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:146762-146953:-1:exon

position:146762:-1
position: 146762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146953:-1
position: 146953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:146346-146496:-1:exon

position:146346:-1
position: 146346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146496:-1
position: 146496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:145584-145800:-1:exon

position:145584:-1
position: 145584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145800:-1
position: 145800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:145027-145053:-1:exon

position:145027:-1
position: 145027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145053:-1
position: 145053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:142530-142559:-1:exon

position:142530:-1
position: 142530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142559:-1
position: 142559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:141834-141976:-1:exon

position:141834:-1
position: 141834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141976:-1
position: 141976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:140353-140492:-1:exon

position:140492:-1
position: 140492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105842044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105842044
product: O-acyltransferase like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038016593.1
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140353..140492,141834..141976,142530..142559,145027..145053,145611..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151624,157854..158287))
location: region:140353-158287:-1
so has part: feature:157854-158287:-1:exon
so has part: feature:151533-151624:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145611-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140353-140492:-1:exon

position:158287:-1
position: 158287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157854-158287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151533-151624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151182-151324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150088-150412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149909-150020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149526-149613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149134-149294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148577-148762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146762-146953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146346-146496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145611-145800:-1:exon

position:145611:-1
position: 145611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:145027-145053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142530-142559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:141834-141976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:140353-140492:-1:exon

LOC105842044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105842044
product: O-acyltransferase like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038016592.1
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140353..140492,141834..141976,142530..142559,145027..145053,145584..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151624,151697..151758))
location: region:140353-151758:-1
so has part: feature:151697-151758:-1:exon
so has part: feature:151533-151624:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145584-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140353-140492:-1:exon

position:151758:-1
position: 151758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151697-151758:-1:exon

position:151697:-1
position: 151697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151533-151624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151182-151324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150088-150412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149909-150020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149526-149613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149134-149294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148577-148762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146762-146953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146346-146496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145584-145800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145027-145053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142530-142559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:141834-141976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:140353-140492:-1:exon

LOC105842044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105842044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X2
translation: MATWRLVTLAVVCGVAAAGGHVDRLATDEQYAQFPTLFQLDDYHKCLGRPEGLYCVGTFNIRPLRRPDPLFDMLKDFSKDTRNFNRTRLHRGYCVNTRCGALPETNTTLRFERCVAQWGRKRGMQLSLQQLQYCRTHVQEKAARSGPLPLETSHRVFLAVIAAIVFMNFIGTVYDMSTKDDDKKSKLLSSWSIRSNWQYIVGPYPDGDPRLAVLLPVQAFRTIMLLLVIMLHVCMIHVALYIQNPEFIERTYHKTEVTILRNGSSSVQMFFLLSSFLMAQGILHSKEEPSLRLFFKLLLKRIVRISPVYLLVIGFASTWWPLMRGGPLWPVVVEAESAVCRRKFWAHAFFYNNFFDDSKYCQTQTWFLAVDMQLHALGLAVVMCTRGAGWGARRGVLWLLGTMFLASCLLNTWMAYVSEWQPLMFVSVPENVRTMFSGEPTFSEYYTKPWGSLPASLLGLLVAHLHHHLYQRGFKPEEHKGLIVACQSMVPVIPAWVLCGNLVRSVRSRGFIALYMGLEAPVLCVMAALLLFGAYNGSTKTDIGKKTTPDSKDKTAQRIATKGYLQHVFCWRGWFALGRLSLSALMLHWCVYTLFAASVNTPVTSSVLHIARDTLATAWLTYGAALPLTLLVEAPALRLYSALVH
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140385..140492,141834..141976,142530..142559,145027..145053,145611..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151614))
location: region:140385-151614:-1
so has part: feature:151533-151614:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145611-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140385-140492:-1:exon

XP_037872521.1
type: Protein
SIO_000068: ncbiprotein

position:140385:-1
position: 140385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151614:-1
position: 151614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151533-151614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151182-151324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150088-150412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149909-150020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149526-149613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149134-149294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148577-148762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146762-146953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146346-146496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145611-145800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145027-145053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142530-142559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141834-141976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140385-140492:-1:exon

LOC105842044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105842044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nose resistant to fluoxetine protein 6 isoform X1
translation: MATWRLVTLAVVCGVAAAGGHVDRLATDEQYAQFPTLFQLDDYHKCLGRPEGLYCVGTFNIRPLRRPDPLFDMLKDFSKDTRNFNRTRLHRGYCVNTRCGALPETNTTLRFERCVAQWGRKRGMQLSLQQLQYCRTHVQEKAARSGPLPLETSHRVFLAVIAAIVFMNFIGTVYDMSTKDDDKKSKLLSSWSIRSNWQYIVGPYPDGDPRLAVLLPVQAFRTIMLLLVIMLHVCMIHVALYIQNPEFIERTYHKTEVTILRNGSSSVQMFFLLSSFLMAQGILHSKEEPSLRLFFKLLLKRIVRISPVYLLVIGFASTWWPLMRGGPLWPVVVEAESAVCRRKFWAHAFFYNNFFDDSKYCQTQTWFLAVDMQLHALGLAVVMCTRGAGWGARRGVLWLLGTMFLASCLLNTWMAYVSEWQPLMFVSVPENVRTMFSGEPTFSEYYTKPWGSLPASLLGLLVAHLHHHLYQRGFKPEEHKGLIVACQSMVPVIPAWVLCGNLVRSVRSRGFIALYMGLEAPVLCVMAALLLFGAYNGSTKTDIGNHNHALAQGKKTTPDSKDKTAQRIATKGYLQHVFCWRGWFALGRLSLSALMLHWCVYTLFAASVNTPVTSSVLHIARDTLATAWLTYGAALPLTLLVEAPALRLYSALVH
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140385..140492,141834..141976,142530..142559,145027..145053,145584..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151614))
location: region:140385-151614:-1
so has part: feature:151533-151614:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145584-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140385-140492:-1:exon

XP_037872519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151533-151614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151182-151324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150088-150412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149909-150020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149526-149613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149134-149294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148577-148762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146762-146953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146346-146496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145584-145800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145027-145053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142530-142559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141834-141976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140385-140492:-1:exon

LOC105842044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105842044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nose resistant to fluoxetine protein 6 isoform X1
translation: MATWRLVTLAVVCGVAAAGGHVDRLATDEQYAQFPTLFQLDDYHKCLGRPEGLYCVGTFNIRPLRRPDPLFDMLKDFSKDTRNFNRTRLHRGYCVNTRCGALPETNTTLRFERCVAQWGRKRGMQLSLQQLQYCRTHVQEKAARSGPLPLETSHRVFLAVIAAIVFMNFIGTVYDMSTKDDDKKSKLLSSWSIRSNWQYIVGPYPDGDPRLAVLLPVQAFRTIMLLLVIMLHVCMIHVALYIQNPEFIERTYHKTEVTILRNGSSSVQMFFLLSSFLMAQGILHSKEEPSLRLFFKLLLKRIVRISPVYLLVIGFASTWWPLMRGGPLWPVVVEAESAVCRRKFWAHAFFYNNFFDDSKYCQTQTWFLAVDMQLHALGLAVVMCTRGAGWGARRGVLWLLGTMFLASCLLNTWMAYVSEWQPLMFVSVPENVRTMFSGEPTFSEYYTKPWGSLPASLLGLLVAHLHHHLYQRGFKPEEHKGLIVACQSMVPVIPAWVLCGNLVRSVRSRGFIALYMGLEAPVLCVMAALLLFGAYNGSTKTDIGNHNHALAQGKKTTPDSKDKTAQRIATKGYLQHVFCWRGWFALGRLSLSALMLHWCVYTLFAASVNTPVTSSVLHIARDTLATAWLTYGAALPLTLLVEAPALRLYSALVH
SIO_010081: LOC105842044
subclass of: SO_0000673
so part of: LOC105842044
location: complement(join(140385..140492,141834..141976,142530..142559,145027..145053,145584..145800,146346..146496,146762..146953,148577..148762,149134..149294,149526..149613,149909..150020,150088..150412,151182..151324,151533..151614))
location: region:140385-151614:-1
so has part: feature:151533-151614:-1:exon
so has part: feature:151182-151324:-1:exon
so has part: feature:150088-150412:-1:exon
so has part: feature:149909-150020:-1:exon
so has part: feature:149526-149613:-1:exon
so has part: feature:149134-149294:-1:exon
so has part: feature:148577-148762:-1:exon
so has part: feature:146762-146953:-1:exon
so has part: feature:146346-146496:-1:exon
so has part: feature:145584-145800:-1:exon
so has part: feature:145027-145053:-1:exon
so has part: feature:142530-142559:-1:exon
so has part: feature:141834-141976:-1:exon
so has part: feature:140385-140492:-1:exon

XP_037872520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151533-151614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151182-151324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150088-150412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149909-150020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149526-149613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149134-149294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148577-148762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146762-146953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146346-146496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145584-145800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145027-145053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142530-142559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141834-141976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140385-140492:-1:exon

LOC110385686
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(166399..167452)
location: region:166399-167452:-1
so has part: feature:166399-167452:-1:exon
subclass of: SO_0000011

110385686
type: Gene
SIO_000068: ncbigene

position:166399:-1
position: 166399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167452:-1
position: 167452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166399-167452:-1:exon

LOC110385686
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385686
product: uncharacterized LOC110385686
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_002430945.2
SIO_010081: LOC110385686
subclass of: SO_0000673
so part of: LOC110385686
location: complement(join(166399..166871,167296..167452))
location: region:166399-167452:-1
so has part: feature:167296-167452:-1:exon
so has part: feature:166399-166871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167296-167452:-1:exon

position:167296:-1
position: 167296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166399-166871:-1:exon

position:166871:-1
position: 166871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101736148
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101736148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(170040..182630)
location: region:170040-182630:-1
so has part: feature:170040-182630:-1:exon
subclass of: SO_0000010

101736148
type: Gene
SIO_000068: ncbigene

position:170040:-1
position: 170040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182630:-1
position: 182630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170040-182630:-1:exon

LOC101736148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736148
product: nose resistant to fluoxetine protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_004929066.3
SIO_010081: LOC101736148
subclass of: SO_0000673
so part of: LOC101736148
location: complement(join(170040..170889,172749..172891,173159..173336,173699..173852,174120..174299,174745..174930,175457..175623,175973..176060,176224..176335,176894..177218,177787..177929,182260..182630))
location: region:170040-182630:-1
so has part: feature:182260-182630:-1:exon
so has part: feature:177787-177929:-1:exon
so has part: feature:176894-177218:-1:exon
so has part: feature:176224-176335:-1:exon
so has part: feature:175973-176060:-1:exon
so has part: feature:175457-175623:-1:exon
so has part: feature:174745-174930:-1:exon
so has part: feature:174120-174299:-1:exon
so has part: feature:173699-173852:-1:exon
so has part: feature:173159-173336:-1:exon
so has part: feature:172749-172891:-1:exon
so has part: feature:170040-170889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182260-182630:-1:exon

position:182260:-1
position: 182260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177787-177929:-1:exon

position:177787:-1
position: 177787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177929:-1
position: 177929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176894-177218:-1:exon

position:176894:-1
position: 176894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177218:-1
position: 177218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176224-176335:-1:exon

position:176224:-1
position: 176224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176335:-1
position: 176335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175973-176060:-1:exon

position:175973:-1
position: 175973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176060:-1
position: 176060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:175457-175623:-1:exon

position:175457:-1
position: 175457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175623:-1
position: 175623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:174745-174930:-1:exon

position:174745:-1
position: 174745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174930:-1
position: 174930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:174120-174299:-1:exon

position:174120:-1
position: 174120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174299:-1
position: 174299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:173699-173852:-1:exon

position:173699:-1
position: 173699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173852:-1
position: 173852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:173159-173336:-1:exon

position:173159:-1
position: 173159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173336:-1
position: 173336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:172749-172891:-1:exon

position:172749:-1
position: 172749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172891:-1
position: 172891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:170040-170889:-1:exon

position:170889:-1
position: 170889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101736148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nose resistant to fluoxetine protein 6
translation: MSVLVLLLVSTAAHGLSDEEYSRFPRLFHLDDYDTCLSQPGGLYCVGSFHITPVTPEHPTYELMKEYSEHPSNFNRTVLYRGYCVSSRCGTASETNTSLRFEQCANRWGEKYAFRLSLQKLQYCRSFAQEFARKNTQEPMDEPQKIFLSVVCALLFFNFIGTAYDLLLGDERKKSKHLVSWSLRSNWNRLIATYEDGDPRLSALNPVQGVRVFLMSLTILTHSGVIRGSFYVFNPRFIEEIVKSPLLMLFFNGTTLIQFFLVMSNFLLAYNLLLASKTHELKFKHLPLCILKRIARITPVYLLVVGYSATWWPYARSGPLWPTLVEAESAICRKKFWFQAFFINNLVQAEEHCLVQTWFLAVDMQLYILGSALTLYLASRRDIALKVLGALFVSSLLLNAGLSYAFDWQALVYFATPENIRNMYLNVPSFSRLYTSPWGSLPACFIGLFLAHVHFELQEKGLKKRDISFVVNILYQLAPLVLVFWVLSGTWLREFSTRGFVAFYVALERMVFSCFCALILFGMFNGGSNMLKEFSAWRGWHAMGRMSLSVLMLHWCVNTIIAHSRLQPSTTTVLDVFADFAATGFYTYLLAIPLTLLVEMPIQRFISGLIL
SIO_010081: LOC101736148
subclass of: SO_0000673
so part of: LOC101736148
location: complement(join(170782..170889,172749..172891,173159..173336,173699..173852,174120..174299,174745..174930,175457..175623,175973..176060,176224..176335,176894..177218,177787..177929,182260..182311))
location: region:170782-182311:-1
so has part: feature:182260-182311:-1:exon
so has part: feature:177787-177929:-1:exon
so has part: feature:176894-177218:-1:exon
so has part: feature:176224-176335:-1:exon
so has part: feature:175973-176060:-1:exon
so has part: feature:175457-175623:-1:exon
so has part: feature:174745-174930:-1:exon
so has part: feature:174120-174299:-1:exon
so has part: feature:173699-173852:-1:exon
so has part: feature:173159-173336:-1:exon
so has part: feature:172749-172891:-1:exon
so has part: feature:170782-170889:-1:exon

XP_004929123.3
type: Protein
SIO_000068: ncbiprotein

position:170782:-1
position: 170782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182311:-1
position: 182311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182260-182311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177787-177929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176894-177218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176224-176335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175973-176060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175457-175623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:174745-174930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:174120-174299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173699-173852:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173159-173336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:172749-172891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:170782-170889:-1:exon

LOC101736013
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219877..247503
location: region:219877-247503:1
so has part: feature:219877-247503:1:exon
subclass of: SO_0000010

101736013
type: Gene
SIO_000068: ncbigene

position:219877:1
position: 219877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247503:1
position: 247503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219877-247503:1:exon

LOC101736013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736013
product: O-acyltransferase like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038016393.1
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219877..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..247503)
location: region:219877-247503:1
so has part: feature:219877-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-247503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219877-220029:1:exon

position:220029:1
position: 220029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

position:227708:1
position: 227708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227844:1
position: 227844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

position:228568:1
position: 228568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228704:1
position: 228704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

position:229211:1
position: 229211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229419:1
position: 229419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

position:234441:1
position: 234441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234634:1
position: 234634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

position:235100:1
position: 235100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235272:1
position: 235272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

position:235610:1
position: 235610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235795:1
position: 235795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

position:237704:1
position: 237704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237883:1
position: 237883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

position:239327:1
position: 239327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239477:1
position: 239477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

position:242066:1
position: 242066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242249:1
position: 242249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

position:242868:1
position: 242868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243010:1
position: 243010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

position:243838:1
position: 243838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243957:1
position: 243957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:244636-247503:1:exon

position:244636:1
position: 244636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101736013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736013
product: O-acyltransferase like protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_012692835.3
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219877..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,244636..247503)
location: region:219877-247503:1
so has part: feature:219877-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:244636-247503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219877-220029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244636-247503:1:exon

LOC101736013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736013
product: O-acyltransferase like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038016394.1
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219877..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242877..243010,243838..243957,244636..247503)
location: region:219877-247503:1
so has part: feature:219877-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242877-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-247503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219877-220029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242877-243010:1:exon

position:242877:1
position: 242877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-247503:1:exon

LOC101736013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X1
translation: MWARAVSLALATVALAGASDVLYEISDEQYYEMPTLFHLDEYERCLATRGVYCTGSFELSPQGPHQLFQLMQRYAANWVDNFNHTRLHRGLCVSQRCRQLAPQQHPGQGEHNAALAEWFESCVNESTMLSYNLSSRLYQLEYCRRGEVNPDGLSTNERAFAGFVAILLALCAVSTVLDLTLSDHAKKGAAWALSFSIPGCWRSLLAPPPCSSETDLRAFDGLRVLCMMCVIIEHVCWITTHTFLADTRRYEQTRRALDAMLMANSTLVVQIFFMMSSFLLAHKLLQQRRRGEQVPVVRTFFDTMINRIIRVSPSYFVVVWFAASWWSRAGSGPMWTPLIEAEVNICRSKWWTHLLYLNNIVYANDKCLIQTWYLAADMQLYGLSLLLTLALWRCRRGAIYVLTALLAGSIALLFGLAYTWRLVPTFVMHRPESVRTTYSTEPSFNVLYQSPLGNVPGALAGLLLAHLHHQLLDSRIVLSKYKWFRWSAVSSVCVSAWWVAASPLLLGRGAPGRGGAAALAALERPIFAFFVGVALLGAMHGVPSPIGSFLSWRGWGCGARLSFGALLLHLPLNKSLVAARLAPTQLDRQSAVVLSGVYGYTAIARSPLPRSFSSREHHGYLLVAAAIRRVQILEWFGVASVSYLAALPLALCVELPAQRLHRALSALRRRSHAQSDAAPHDTRQKTDL
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219951..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..244809)
location: region:219951-244809:1
so has part: feature:219951-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-244809:1:exon

XP_037872321.1
type: Protein
SIO_000068: ncbiprotein

position:219951:1
position: 219951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244809:1
position: 244809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219951-220029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-244809:1:exon

LOC101736013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X5
translation: MWARAVSLALATVALAGASDVLYEISDEQYYEMPTLFHLDEYERCLATRGVYCTGSFELSPQGPHQLFQLMQRYAANWVDNFNHTRLHRGLCVSQRCRQLAPQQHPGQGEHNAALAEWFESCVNESTMLSYNLSSRLYQLEYCRRGEVNPDGLSTNERAFAGFVAILLALCAVSTVLDLTLSDHAKKGAAWALSFSIPGCWRSLLAPPPCSSETDLRAFDGLRVLCMMCVIIEHVCWITTHTFLADTRRYEQTRRALDAMLMANSTLVVQIFFMMSSFLLAHKLLQQRRRGEQVPVVRTFFDTMINRIIRVSPSYFVVVWFAASWWSRAGSGPMWTPLIEAEVNICRSKWWTHLLYLNNIVYANDKCLIQTWYLAADMQLYGLSLLLTLALWRCRRGAIYVLTALLAGSIALLFGLAYTWRLVPTFVMHRPESVRTTYSTEPSFNVLYQSPLGNVPGALAGLLLAHLHHQLLDSRIVLSKYKWFRWSAVSSVCVSAWWVAASPLLLGRGAPGRGGAAALAALERPIFAFFVGVALLGAMHGVPSPIGSFLSWRGWGCGARLSFGALLLHLPLNKSLVAARLAPTQLDRQSAILEWFGVASVSYLAALPLALCVELPAQRLHRALSALRRRSHAQSDAAPHDTRQKTDL
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219951..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,244636..244809)
location: region:219951-244809:1
so has part: feature:219951-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:244636-244809:1:exon

XP_012548289.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219951-220029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244636-244809:1:exon

LOC101736013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X2
translation: MWARAVSLALATVALAGASDVLYEISDEQYYEMPTLFHLDEYERCLATRGVYCTGSFELSPQGPHQLFQLMQRYAANWVDNFNHTRLHRGLCVSQRCRQLAPQQHPGQGEHNAALAEWFESCVNESTMLSYNLSSRLYQLEYCRRGEVNPDGLSTNERAFAGFVAILLALCAVSTVLDLTLSDHAKKGAAWALSFSIPGCWRSLLAPPPCSSETDLRAFDGLRVLCMMCVIIEHVCWITTHTFLADTRRYEQTRRALDAMLMANSTLVVQIFFMMSSFLLAHKLLQQRRRGEQVPVVRTFFDTMINRIIRVSPSYFVVVWFAASWWSRAGSGPMWTPLIEAEVNICRSKWWTHLLYLNNIVYANDKCLIQTWYLAADMQLYGLSLLLTLALWRCRRGAIYVLTALLAGSIALLFGLAYTWRLVPTFVMHRPESVRTTYSTEPSFNVLYQSPLGNVPGALAGLLLAHLHHQLLDSRIVLSKYKWFRWSAVSSVCVSAWWVAASPLLLGRGAPGRGGAAALAALERPIFAFFVGVALLGAMHGVPCSFLSWRGWGCGARLSFGALLLHLPLNKSLVAARLAPTQLDRQSAVVLSGVYGYTAIARSPLPRSFSSREHHGYLLVAAAIRRVQILEWFGVASVSYLAALPLALCVELPAQRLHRALSALRRRSHAQSDAAPHDTRQKTDL
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(219951..220029,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242877..243010,243838..243957,244636..244809)
location: region:219951-244809:1
so has part: feature:219951-220029:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242877-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-244809:1:exon

XP_037872322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219951-220029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242877-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-244809:1:exon

LOC101736013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736013
product: O-acyltransferase like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038016395.1
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(220096..220350,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..247503)
location: region:220096-247503:1
so has part: feature:220096-220350:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-247503:1:exon

position:220096:1
position: 220096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220096-220350:1:exon

position:220350:1
position: 220350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-247503:1:exon

LOC101736013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X3
translation: MRRRVDEQYYEMPTLFHLDEYERCLATRGVYCTGSFELSPQGPHQLFQLMQRYAANWVDNFNHTRLHRGLCVSQRCRQLAPQQHPGQGEHNAALAEWFESCVNESTMLSYNLSSRLYQLEYCRRGEVNPDGLSTNERAFAGFVAILLALCAVSTVLDLTLSDHAKKGAAWALSFSIPGCWRSLLAPPPCSSETDLRAFDGLRVLCMMCVIIEHVCWITTHTFLADTRRYEQTRRALDAMLMANSTLVVQIFFMMSSFLLAHKLLQQRRRGEQVPVVRTFFDTMINRIIRVSPSYFVVVWFAASWWSRAGSGPMWTPLIEAEVNICRSKWWTHLLYLNNIVYANDKCLIQTWYLAADMQLYGLSLLLTLALWRCRRGAIYVLTALLAGSIALLFGLAYTWRLVPTFVMHRPESVRTTYSTEPSFNVLYQSPLGNVPGALAGLLLAHLHHQLLDSRIVLSKYKWFRWSAVSSVCVSAWWVAASPLLLGRGAPGRGGAAALAALERPIFAFFVGVALLGAMHGVPSPIGSFLSWRGWGCGARLSFGALLLHLPLNKSLVAARLAPTQLDRQSAVVLSGVYGYTAIARSPLPRSFSSREHHGYLLVAAAIRRVQILEWFGVASVSYLAALPLALCVELPAQRLHRALSALRRRSHAQSDAAPHDTRQKTDL
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(220335..220350,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..244809)
location: region:220335-244809:1
so has part: feature:220335-220350:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-244809:1:exon

XP_037872323.1
type: Protein
SIO_000068: ncbiprotein

position:220335:1
position: 220335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220335-220350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-244809:1:exon

LOC101736013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736013
product: O-acyltransferase like protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038016396.1
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(220422..220531,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..247503)
location: region:220422-247503:1
so has part: feature:220422-220531:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-247503:1:exon

position:220422:1
position: 220422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220422-220531:1:exon

position:220531:1
position: 220531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-247503:1:exon

LOC101736013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acyltransferase like protein isoform X4
translation: MVPDEQYYEMPTLFHLDEYERCLATRGVYCTGSFELSPQGPHQLFQLMQRYAANWVDNFNHTRLHRGLCVSQRCRQLAPQQHPGQGEHNAALAEWFESCVNESTMLSYNLSSRLYQLEYCRRGEVNPDGLSTNERAFAGFVAILLALCAVSTVLDLTLSDHAKKGAAWALSFSIPGCWRSLLAPPPCSSETDLRAFDGLRVLCMMCVIIEHVCWITTHTFLADTRRYEQTRRALDAMLMANSTLVVQIFFMMSSFLLAHKLLQQRRRGEQVPVVRTFFDTMINRIIRVSPSYFVVVWFAASWWSRAGSGPMWTPLIEAEVNICRSKWWTHLLYLNNIVYANDKCLIQTWYLAADMQLYGLSLLLTLALWRCRRGAIYVLTALLAGSIALLFGLAYTWRLVPTFVMHRPESVRTTYSTEPSFNVLYQSPLGNVPGALAGLLLAHLHHQLLDSRIVLSKYKWFRWSAVSSVCVSAWWVAASPLLLGRGAPGRGGAAALAALERPIFAFFVGVALLGAMHGVPSPIGSFLSWRGWGCGARLSFGALLLHLPLNKSLVAARLAPTQLDRQSAVVLSGVYGYTAIARSPLPRSFSSREHHGYLLVAAAIRRVQILEWFGVASVSYLAALPLALCVELPAQRLHRALSALRRRSHAQSDAAPHDTRQKTDL
SIO_010081: LOC101736013
subclass of: SO_0000673
so part of: LOC101736013
location: join(220522..220531,227708..227844,228568..228704,229211..229419,234441..234634,235100..235272,235610..235795,237704..237883,239327..239477,242066..242249,242868..243010,243838..243957,244636..244809)
location: region:220522-244809:1
so has part: feature:220522-220531:1:exon
so has part: feature:227708-227844:1:exon
so has part: feature:228568-228704:1:exon
so has part: feature:229211-229419:1:exon
so has part: feature:234441-234634:1:exon
so has part: feature:235100-235272:1:exon
so has part: feature:235610-235795:1:exon
so has part: feature:237704-237883:1:exon
so has part: feature:239327-239477:1:exon
so has part: feature:242066-242249:1:exon
so has part: feature:242868-243010:1:exon
so has part: feature:243838-243957:1:exon
so has part: feature:244636-244809:1:exon

XP_037872324.1
type: Protein
SIO_000068: ncbiprotein

position:220522:1
position: 220522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220522-220531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227708-227844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228568-228704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229211-229419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234441-234634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235100-235272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235610-235795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237704-237883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239327-239477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242066-242249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242868-243010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243838-243957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244636-244809:1:exon

LOC110385676
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224556..225615)
location: region:224556-225615:-1
so has part: feature:224556-225615:-1:exon
subclass of: SO_0000011

110385676
type: Gene
SIO_000068: ncbigene

position:224556:-1
position: 224556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225615:-1
position: 225615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224556-225615:-1:exon

LOC110385676
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385676
product: uncharacterized LOC110385676
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_002430938.2
SIO_010081: LOC110385676
subclass of: SO_0000673
so part of: LOC110385676
location: complement(join(224556..224744,225192..225615))
location: region:224556-225615:-1
so has part: feature:225192-225615:-1:exon
so has part: feature:224556-224744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225192-225615:-1:exon

position:225192:-1
position: 225192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224556-224744:-1:exon

position:224744:-1
position: 224744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744663
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246990..249562)
location: region:246990-249562:-1
so has part: feature:246990-249562:-1:exon
subclass of: SO_0000010

101744663
type: Gene
SIO_000068: ncbigene

position:246990:-1
position: 246990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249562:-1
position: 249562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246990-249562:-1:exon

LOC101744663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744663
product: small nuclear ribonucleoprotein Sm D3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 116 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_004928970.3
SIO_010081: LOC101744663
subclass of: SO_0000673
so part of: LOC101744663
location: complement(join(246990..247998,249110..249562))
location: region:246990-249562:-1
so has part: feature:249110-249562:-1:exon
so has part: feature:246990-247998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249110-249562:-1:exon

position:249110:-1
position: 249110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246990-247998:-1:exon

position:247998:-1
position: 247998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein Sm D3
translation: MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRGKSAILRAQAAGRGRAGGRGGGHRGGWQGGSGPSRR
SIO_010081: LOC101744663
subclass of: SO_0000673
so part of: LOC101744663
location: complement(join(247916..247998,249110..249419))
location: region:247916-249419:-1
so has part: feature:249110-249419:-1:exon
so has part: feature:247916-247998:-1:exon

XP_004929027.1
type: Protein
SIO_000068: ncbiprotein

position:247916:-1
position: 247916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249419:-1
position: 249419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249110-249419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247916-247998:-1:exon

LOC101735885
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101735885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256636..262152
location: region:256636-262152:1
so has part: feature:256636-262152:1:exon
subclass of: SO_0000010

101735885
type: Gene
SIO_000068: ncbigene

position:256636:1
position: 256636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262152:1
position: 262152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256636-262152:1:exon

LOC101735885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735885
product: zinc finger protein 668, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038016350.1
SIO_010081: LOC101735885
subclass of: SO_0000673
so part of: LOC101735885
location: join(256636..257166,257598..257725,258039..258252,258468..258635,259120..259379,261556..261660,261776..261848,261921..262152)
location: region:256636-262152:1
so has part: feature:256636-257166:1:exon
so has part: feature:257598-257725:1:exon
so has part: feature:258039-258252:1:exon
so has part: feature:258468-258635:1:exon
so has part: feature:259120-259379:1:exon
so has part: feature:261556-261660:1:exon
so has part: feature:261776-261848:1:exon
so has part: feature:261921-262152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256636-257166:1:exon

position:257166:1
position: 257166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257598-257725:1:exon

position:257598:1
position: 257598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257725:1
position: 257725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258039-258252:1:exon

position:258039:1
position: 258039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258252:1
position: 258252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:258468-258635:1:exon

position:258468:1
position: 258468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258635:1
position: 258635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259120-259379:1:exon

position:259120:1
position: 259120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259379:1
position: 259379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:261556-261660:1:exon

position:261556:1
position: 261556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261660:1
position: 261660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:261776-261848:1:exon

position:261776:1
position: 261776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261848:1
position: 261848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:261921-262152:1:exon

position:261921:1
position: 261921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101735885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735885
product: zinc finger protein 668, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_038016351.1
SIO_010081: LOC101735885
subclass of: SO_0000673
so part of: LOC101735885
location: join(256636..257166,257598..257725,258039..258252,258468..258635,259120..259379,261776..261848,261921..262152)
location: region:256636-262152:1
so has part: feature:256636-257166:1:exon
so has part: feature:257598-257725:1:exon
so has part: feature:258039-258252:1:exon
so has part: feature:258468-258635:1:exon
so has part: feature:259120-259379:1:exon
so has part: feature:261776-261848:1:exon
so has part: feature:261921-262152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256636-257166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257598-257725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258039-258252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258468-258635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259120-259379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261776-261848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261921-262152:1:exon

LOC101735885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 668 isoform X1
translation: MVTMDELKLEIVADSCCVCGNVSDLQSPEEYDTEAPPGQTPLRMMLLHLNNNKVVPEGRLCSSCIQRTLEAYEFSTALSSSGVPPLSEKIRSLRRKLHELTQKIDVFIVVGGSSLASGGCYNEEDIIMVDKAALAAAAKADDEELERARNARGDTVYQCTVCPASFQRVSEYRTHVESHGRAASHACWTCGAQFATRTALHDHLASHADTTDNTCYVCGTTFQRQSELRRHEAACACRCPSCGAELADRAALSAHAAAAHGVTSRGRPLCPCCFRSFPDGELLAAHLLRHRQAKQFVCGYDSCILRFAARSSLLAHVRKCHGAELPAEPAPPRPPGAACRHCSRTFGSVAAMKRHARVHRDDRASPDLKDELGAESQEEGDEGEVEYLEVETLEDGEVDESVQ
SIO_010081: LOC101735885
subclass of: SO_0000673
so part of: LOC101735885
location: join(257008..257166,257598..257725,258039..258252,258468..258635,259120..259379,261556..261660,261776..261848,261921..262025)
location: region:257008-262025:1
so has part: feature:257008-257166:1:exon
so has part: feature:257598-257725:1:exon
so has part: feature:258039-258252:1:exon
so has part: feature:258468-258635:1:exon
so has part: feature:259120-259379:1:exon
so has part: feature:261556-261660:1:exon
so has part: feature:261776-261848:1:exon
so has part: feature:261921-262025:1:exon

XP_037872278.1
type: Protein
SIO_000068: ncbiprotein

position:257008:1
position: 257008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262025:1
position: 262025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257008-257166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257598-257725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258039-258252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258468-258635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259120-259379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261556-261660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261776-261848:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:261921-262025:1:exon

LOC101735885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 668 isoform X2
translation: MVTMDELKLEIVADSCCVCGNVSDLQSPEEYDTEAPPGQTPLRMMLLHLNNNKVVPEGRLCSSCIQRTLEAYEFSTALSSSGVPPLSEKIRSLRRKLHELTQKIDVFIVVGGSSLASGGCYNEEDIIMVDKAALAAAAKADDEELERARNARGDTVYQCTVCPASFQRVSEYRTHVESHGRAASHACWTCGAQFATRTALHDHLASHADTTDNTCYVCGTTFQRQSELRRHEAACACRCPSCGAELADRAALSAHAAAAHGVTSRGRPLCPCCFRSFPDGELLAAHLLRHRQAKQFVCGYDSCILRFAARFGSVAAMKRHARVHRDDRASPDLKDELGAESQEEGDEGEVEYLEVETLEDGEVDESVQ
SIO_010081: LOC101735885
subclass of: SO_0000673
so part of: LOC101735885
location: join(257008..257166,257598..257725,258039..258252,258468..258635,259120..259379,261776..261848,261921..262025)
location: region:257008-262025:1
so has part: feature:257008-257166:1:exon
so has part: feature:257598-257725:1:exon
so has part: feature:258039-258252:1:exon
so has part: feature:258468-258635:1:exon
so has part: feature:259120-259379:1:exon
so has part: feature:261776-261848:1:exon
so has part: feature:261921-262025:1:exon

XP_037872279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257008-257166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257598-257725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258039-258252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258468-258635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259120-259379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261776-261848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261921-262025:1:exon

LOC101744518
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(262140..267654)
location: region:262140-267654:-1
so has part: feature:262140-267654:-1:exon
subclass of: SO_0000010

101744518
type: Gene
SIO_000068: ncbigene

position:262140:-1
position: 262140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267654:-1
position: 267654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262140-267654:-1:exon

LOC101744518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744518
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_004928969.3
SIO_010081: LOC101744518
subclass of: SO_0000673
so part of: LOC101744518
location: complement(join(262140..262716,264486..264610,265378..265545,266794..266981,267445..267654))
location: region:262140-267654:-1
so has part: feature:267445-267654:-1:exon
so has part: feature:266794-266981:-1:exon
so has part: feature:265378-265545:-1:exon
so has part: feature:264486-264610:-1:exon
so has part: feature:262140-262716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267445-267654:-1:exon

position:267445:-1
position: 267445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266794-266981:-1:exon

position:266794:-1
position: 266794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266981:-1
position: 266981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265378-265545:-1:exon

position:265378:-1
position: 265378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265545:-1
position: 265545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264486-264610:-1:exon

position:264486:-1
position: 264486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264610:-1
position: 264610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262140-262716:-1:exon

position:262716:-1
position: 262716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
translation: MRLLTFSFLKNCTLKSFFNGKPRKYSRVTQTEPKIPQLKGDPNYIEISPTWDTDIKPELRAAVLQDMQVYPGFVTEEEEASLLAELEPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILDRVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMRLEHQHEPALALHALLEHRALYVMKGVARYEFTHAVLGGERSQWRHRPVPRRRRVAVLCRARPEPSS
SIO_010081: LOC101744518
subclass of: SO_0000673
so part of: LOC101744518
location: complement(join(262587..262716,264486..264610,265378..265545,266794..266981,267445..267562))
location: region:262587-267562:-1
so has part: feature:267445-267562:-1:exon
so has part: feature:266794-266981:-1:exon
so has part: feature:265378-265545:-1:exon
so has part: feature:264486-264610:-1:exon
so has part: feature:262587-262716:-1:exon

XP_004929026.1
type: Protein
SIO_000068: ncbiprotein

position:262587:-1
position: 262587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267562:-1
position: 267562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267445-267562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266794-266981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265378-265545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264486-264610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262587-262716:-1:exon

LOC101744376
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281536..295223
location: region:281536-295223:1
so has part: feature:281536-295223:1:exon
subclass of: SO_0000010

101744376
type: Gene
SIO_000068: ncbigene

position:281536:1
position: 281536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295223:1
position: 295223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281536-295223:1:exon

LOC101744376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744376
product: uncharacterized LOC101744376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012692682.3
SIO_010081: LOC101744376
subclass of: SO_0000673
so part of: LOC101744376
location: join(281536..281916,286958..287094,287658..287788,288671..288843,289697..289808,290039..290126,290334..290509,291069..291248,292269..292416,293144..293321,293831..293973,294786..295223)
location: region:281536-295223:1
so has part: feature:281536-281916:1:exon
so has part: feature:286958-287094:1:exon
so has part: feature:287658-287788:1:exon
so has part: feature:288671-288843:1:exon
so has part: feature:289697-289808:1:exon
so has part: feature:290039-290126:1:exon
so has part: feature:290334-290509:1:exon
so has part: feature:291069-291248:1:exon
so has part: feature:292269-292416:1:exon
so has part: feature:293144-293321:1:exon
so has part: feature:293831-293973:1:exon
so has part: feature:294786-295223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281536-281916:1:exon

position:281916:1
position: 281916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286958-287094:1:exon

position:286958:1
position: 286958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287094:1
position: 287094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287658-287788:1:exon

position:287658:1
position: 287658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287788:1
position: 287788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288671-288843:1:exon

position:288671:1
position: 288671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288843:1
position: 288843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289697-289808:1:exon

position:289697:1
position: 289697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289808:1
position: 289808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290039-290126:1:exon

position:290039:1
position: 290039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290126:1
position: 290126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:290334-290509:1:exon

position:290334:1
position: 290334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290509:1
position: 290509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291069-291248:1:exon

position:291069:1
position: 291069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291248:1
position: 291248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:292269-292416:1:exon

position:292269:1
position: 292269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292416:1
position: 292416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:293144-293321:1:exon

position:293144:1
position: 293144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293321:1
position: 293321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:293831-293973:1:exon

position:293831:1
position: 293831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293973:1
position: 293973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:294786-295223:1:exon

position:294786:1
position: 294786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101744376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744376
translation: MLGRFLFTVLITGLRAATVEDELFYDLPQLFHLDDYERCLSNSGVYCMGEFDLLPHKNEPLLEYIEKYSADKYHFNRSHIHRAYCVTTRCARGPATEEASFEQCVQNHTRERYGLDSKLRKLVYCKSRSSQTAPDSVDLTVATAAAALVLLNLIATAYDYFRNQNDKPNRYLITWSLISNWNRLTADYADGDQKLAALKPLHGVKTLTLVCIMLAHTVMAFHMIYLLNPHFLEKNSHHPASAYLQNGTCAVHTFVLASSFLLTYSLLISEDKNPKEKLNVRLLPKILVHRYIRFLTVDMQLHVVCCAVVLSLGRNTRRALLALGALLAVAVAANFAAIYHFELRSIATLMFPEYIRVQFESERSFKWLYVAPWDALPAALLGALLAHVHAADWGGRKPGDSLIVRILYRLSVPLMVGWVQAGYWMKNSTDPVLSALYATFDRPIFCSIVAFAIFGFINKFDSLYWKFLSWRGWEILGRMSLTAYLVHWLTTLTLVGSLDFLAPLSIINIGGYWLCTVVLTYMISVPLHLFVELPIHRFLRVIFS
SIO_010081: LOC101744376
subclass of: SO_0000673
so part of: LOC101744376
location: join(281856..281916,286958..287094,287658..287788,288671..288843,289697..289808,290039..290126,290334..290509,291069..291248,292269..292416,293144..293321,293831..293973,294786..294893)
location: region:281856-294893:1
so has part: feature:281856-281916:1:exon
so has part: feature:286958-287094:1:exon
so has part: feature:287658-287788:1:exon
so has part: feature:288671-288843:1:exon
so has part: feature:289697-289808:1:exon
so has part: feature:290039-290126:1:exon
so has part: feature:290334-290509:1:exon
so has part: feature:291069-291248:1:exon
so has part: feature:292269-292416:1:exon
so has part: feature:293144-293321:1:exon
so has part: feature:293831-293973:1:exon
so has part: feature:294786-294893:1:exon

XP_012548136.1
type: Protein
SIO_000068: ncbiprotein

position:281856:1
position: 281856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294893:1
position: 294893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281856-281916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286958-287094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287658-287788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288671-288843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289697-289808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290039-290126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290334-290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291069-291248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:292269-292416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293144-293321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293831-293973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294786-294893:1:exon

LOC101735752
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101735752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295785..314321
location: region:295785-314321:1
so has part: feature:295785-314321:1:exon
subclass of: SO_0000010

101735752
type: Gene
SIO_000068: ncbigene

position:295785:1
position: 295785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314321:1
position: 314321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295785-314321:1:exon

LOC101735752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735752
product: uncharacterized LOC101735752, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_021349783.2
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(295785..296142,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..314321)
location: region:295785-314321:1
so has part: feature:295785-296142:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-314321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295785-296142:1:exon

position:296142:1
position: 296142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

position:309563:1
position: 309563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309625:1
position: 309625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

position:310286:1
position: 310286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310452:1
position: 310452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

position:310526:1
position: 310526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310646:1
position: 310646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

position:311040:1
position: 311040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311161:1
position: 311161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

position:311342:1
position: 311342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311647:1
position: 311647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

position:311983:1
position: 311983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312135:1
position: 312135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

position:312212:1
position: 312212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312383:1
position: 312383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

position:312464:1
position: 312464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312550:1
position: 312550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:312703-314321:1:exon

position:312703:1
position: 312703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101735752
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC101735752
product: uncharacterized LOC101735752, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XR_005245629.1
SIO_010081: LOC101735752
so part of: LOC101735752
location: join(295785..296142,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..312905,313508..314321)
location: region:295785-314321:1
so has part: feature:295785-296142:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-312905:1:exon
so has part: feature:313508-314321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295785-296142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312703-312905:1:exon

position:312905:1
position: 312905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:313508-314321:1:exon

position:313508:1
position: 313508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101735752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101735752 isoform X1
translation: MGSHQSHDKADGSGSGTSTPRGSQRGAGSRSGSGGDLQGLAERQEKPPLSMVPVEKLGKLLAQISQKEDGINGVTENSFKKYLFPMYPELAHHFYKYIHRIGKCKNKHIPLSTFRMQCEKILSMLDDAVIIETYVRMFSMETDENNMTPDGLRNMLYTSYKLSMDHYPEGPQTCLMINQTLSAVVDGCFNKKDVHSVGFVVRWLEEHCHRIIFPVHRYCVHLLATRHRDMEAHVESRGAGAGLELATPVLERGGAARGSALLPVSAAWLLAAAAPPRYSRPAAPPAPSAGWLVARLVCAVPSHWTPLYSSSDQGLAANRFLHHTLAYRGPTVVLARGGPLLVALCCPAEWRDSHCYWGDADCALLQLLPTFSLIERAPKMIYLNTSIRGYPKGLRAGSDPRRPALAIAEGFDSFTFNGAPYSLDSIEVWGCGDQASRETQLEIKKWQIREAEKQRQVKLSAADWMEHPDRYLLELAGRPQYNNSAS
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(295966..296142,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..312795)
location: region:295966-312795:1
so has part: feature:295966-296142:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-312795:1:exon

XP_021205458.2
type: Protein
SIO_000068: ncbiprotein

position:295966:1
position: 295966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312795:1
position: 312795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295966-296142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312703-312795:1:exon

LOC101735752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735752
product: uncharacterized LOC101735752, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_038016538.1
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(307470..307622,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..314321)
location: region:307470-314321:1
so has part: feature:307470-307622:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-314321:1:exon

position:307470:1
position: 307470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307470-307622:1:exon

position:307622:1
position: 307622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312703-314321:1:exon

LOC101735752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101735752 isoform X2
translation: MSDTKYRHLEKWVPPFKSLRYSIVGIQRSRVTRRNTAAPTCKLLAQISQKEDGINGVTENSFKKYLFPMYPELAHHFYKYIHRIGKCKNKHIPLSTFRMQCEKILSMLDDAVIIETYVRMFSMETDENNMTPDGLRNMLYTSYKLSMDHYPEGPQTCLMINQTLSAVVDGCFNKKDVHSVGFVVRWLEEHCHRIIFPVHRYCVHLLATRHRDMEAHVESRGAGAGLELATPVLERGGAARGSALLPVSAAWLLAAAAPPRYSRPAAPPAPSAGWLVARLVCAVPSHWTPLYSSSDQGLAANRFLHHTLAYRGPTVVLARGGPLLVALCCPAEWRDSHCYWGDADCALLQLLPTFSLIERAPKMIYLNTSIRGYPKGLRAGSDPRRPALAIAEGFDSFTFNGAPYSLDSIEVWGCGDQASRETQLEIKKWQIREAEKQRQVKLSAADWMEHPDRYLLELAGRPQYNNSAS
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(307497..307622,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..312795)
location: region:307497-312795:1
so has part: feature:307497-307622:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-312795:1:exon

XP_037872466.1
type: Protein
SIO_000068: ncbiprotein

position:307497:1
position: 307497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307497-307622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312703-312795:1:exon

LOC101735752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735752
product: uncharacterized LOC101735752, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_038016539.1
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(308594..308750,309563..309625,310286..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..314321)
location: region:308594-314321:1
so has part: feature:308594-308750:1:exon
so has part: feature:309563-309625:1:exon
so has part: feature:310286-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-314321:1:exon

position:308594:1
position: 308594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308594-308750:1:exon

position:308750:1
position: 308750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309563-309625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310286-310452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312703-314321:1:exon

LOC101735752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101735752 isoform X3
translation: MYPELAHHFYKYIHRIGKCKNKHIPLSTFRMQCEKILSMLDDAVIIETYVRMFSMETDENNMTPDGLRNMLYTSYKLSMDHYPEGPQTCLMINQTLSAVVDGCFNKKDVHSVGFVVRWLEEHCHRIIFPVHRYCVHLLATRHRDMEAHVESRGAGAGLELATPVLERGGAARGSALLPVSAAWLLAAAAPPRYSRPAAPPAPSAGWLVARLVCAVPSHWTPLYSSSDQGLAANRFLHHTLAYRGPTVVLARGGPLLVALCCPAEWRDSHCYWGDADCALLQLLPTFSLIERAPKMIYLNTSIRGYPKGLRAGSDPRRPALAIAEGFDSFTFNGAPYSLDSIEVWGCGDQASRETQLEIKKWQIREAEKQRQVKLSAADWMEHPDRYLLELAGRPQYNNSAS
SIO_010081: LOC101735752
subclass of: SO_0000673
so part of: LOC101735752
location: join(310301..310452,310526..310646,311040..311161,311342..311647,311983..312135,312212..312383,312464..312550,312703..312795)
location: region:310301-312795:1
so has part: feature:310301-310452:1:exon
so has part: feature:310526-310646:1:exon
so has part: feature:311040-311161:1:exon
so has part: feature:311342-311647:1:exon
so has part: feature:311983-312135:1:exon
so has part: feature:312212-312383:1:exon
so has part: feature:312464-312550:1:exon
so has part: feature:312703-312795:1:exon

XP_037872467.1
type: Protein
SIO_000068: ncbiprotein

position:310301:1
position: 310301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310301-310452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310526-310646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311040-311161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311342-311647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311983-312135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312212-312383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312464-312550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312703-312795:1:exon

LOC101735612
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101735612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 316171..324105
location: region:316171-324105:1
so has part: feature:316171-324105:1:exon
subclass of: SO_0000010

101735612
type: Gene
SIO_000068: ncbigene

position:316171:1
position: 316171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324105:1
position: 324105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316171-324105:1:exon

LOC101735612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735612
product: peroxisome assembly protein 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_038016540.1
SIO_010081: LOC101735612
subclass of: SO_0000673
so part of: LOC101735612
location: join(316171..316441,316831..316939,317524..317726,319414..319649,320313..320454,322102..322184,323895..324105)
location: region:316171-324105:1
so has part: feature:316171-316441:1:exon
so has part: feature:316831-316939:1:exon
so has part: feature:317524-317726:1:exon
so has part: feature:319414-319649:1:exon
so has part: feature:320313-320454:1:exon
so has part: feature:322102-322184:1:exon
so has part: feature:323895-324105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316171-316441:1:exon

position:316441:1
position: 316441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316831-316939:1:exon

position:316831:1
position: 316831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316939:1
position: 316939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317524-317726:1:exon

position:317524:1
position: 317524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317726:1
position: 317726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319414-319649:1:exon

position:319414:1
position: 319414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319649:1
position: 319649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320313-320454:1:exon

position:320313:1
position: 320313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320454:1
position: 320454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322102-322184:1:exon

position:322102:1
position: 322102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322184:1
position: 322184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:323895-324105:1:exon

position:323895:1
position: 323895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101735612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735612
product: peroxisome assembly protein 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038016541.1
SIO_010081: LOC101735612
subclass of: SO_0000673
so part of: LOC101735612
location: join(316171..316441,316831..316939,317524..317726,319414..319649,320313..320454,323895..324105)
location: region:316171-324105:1
so has part: feature:316171-316441:1:exon
so has part: feature:316831-316939:1:exon
so has part: feature:317524-317726:1:exon
so has part: feature:319414-319649:1:exon
so has part: feature:320313-320454:1:exon
so has part: feature:323895-324105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316171-316441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316831-316939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317524-317726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319414-319649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320313-320454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323895-324105:1:exon

LOC101735612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome assembly protein 12 isoform X2
translation: MAVYAAHLTRSFQGTPSVFQVTAQEALGTTLKPALRKVIEYLSVLYPNKCSWCTHWYDELYLLFDCIVQYNYLKYYAASFSESFYGLLRVPISYSSEFSIGQRLPIDLERGSLALLVLLPYVKDKVGAIIDKWREDNEDGKLGKDTRGRLRSAAIKVYAILHLVYEGLQLVQLARYLRGGSPSHSLPMAALGLTLRNAPPQELPEDEYTWSDLFKNLSSGQIGSAALTFPMVGGAVVRGAEYGAFVVQLLRWWRDRGAPPPSLPAPPPPAVHILLHVHIAARPRPRLLPGDLTAGRRVLSRQGILRHTIRCNILYLYKNYISGYG
SIO_010081: LOC101735612
subclass of: SO_0000673
so part of: LOC101735612
location: join(316322..316441,316831..316939,317524..317726,319414..319649,320313..320454,323895..324062)
location: region:316322-324062:1
so has part: feature:316322-316441:1:exon
so has part: feature:316831-316939:1:exon
so has part: feature:317524-317726:1:exon
so has part: feature:319414-319649:1:exon
so has part: feature:320313-320454:1:exon
so has part: feature:323895-324062:1:exon

XP_037872469.1
type: Protein
SIO_000068: ncbiprotein

position:316322:1
position: 316322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324062:1
position: 324062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316322-316441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316831-316939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317524-317726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319414-319649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320313-320454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323895-324062:1:exon

LOC101735612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome assembly protein 12 isoform X1
translation: MAVYAAHLTRSFQGTPSVFQVTAQEALGTTLKPALRKVIEYLSVLYPNKCSWCTHWYDELYLLFDCIVQYNYLKYYAASFSESFYGLLRVPISYSSEFSIGQRLPIDLERGSLALLVLLPYVKDKVGAIIDKWREDNEDGKLGKDTRGRLRSAAIKVYAILHLVYEGLQLVQLARYLRGGSPSHSLPMAALGLTLRNAPPQELPEDEYTWSDLFKNLSSGQIGSAALTFPMVGGAVVRGAEYGAFVVQLLRWWRDRGAPPPSLPAPPPPARAEAAAARNRCPLCAAAWRLPTALPVSGYIFCYTCISRHVRARGCCPVTSLPAAESSLVRVYLDTQ
SIO_010081: LOC101735612
subclass of: SO_0000673
so part of: LOC101735612
location: join(316322..316441,316831..316939,317524..317726,319414..319649,320313..320454,322102..322184,323895..324012)
location: region:316322-324012:1
so has part: feature:316322-316441:1:exon
so has part: feature:316831-316939:1:exon
so has part: feature:317524-317726:1:exon
so has part: feature:319414-319649:1:exon
so has part: feature:320313-320454:1:exon
so has part: feature:322102-322184:1:exon
so has part: feature:323895-324012:1:exon

XP_037872468.1
type: Protein
SIO_000068: ncbiprotein

position:324012:1
position: 324012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316322-316441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316831-316939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317524-317726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319414-319649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320313-320454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322102-322184:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323895-324012:1:exon

LOC101743840
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324210..333850)
location: region:324210-333850:-1
so has part: feature:324210-333850:-1:exon
subclass of: SO_0000010

101743840
type: Gene
SIO_000068: ncbigene

position:324210:-1
position: 324210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333850:-1
position: 333850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324210-333850:-1:exon

LOC101743840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743840
product: Poxin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_038016542.1
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(324210..326004,326108..326299,327385..327498,328232..328384,333809..333850))
location: region:324210-333850:-1
so has part: feature:333809-333850:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:324210-326004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333809-333850:-1:exon

position:333809:-1
position: 333809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

position:328232:-1
position: 328232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328384:-1
position: 328384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

position:327385:-1
position: 327385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327498:-1
position: 327498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

position:326108:-1
position: 326108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326299:-1
position: 326299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324210-326004:-1:exon

position:326004:-1
position: 326004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743840
product: Poxin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_038016543.1
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(324210..326004,326108..326299,327385..327498,328232..328384,332433..332585))
location: region:324210-332585:-1
so has part: feature:332433-332585:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:324210-326004:-1:exon

position:332585:-1
position: 332585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332433-332585:-1:exon

position:332433:-1
position: 332433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324210-326004:-1:exon

LOC101743840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743840
product: Poxin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_038016545.1
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(324210..326004,326108..326299,327385..327498,328232..328384,332120..332256))
location: region:324210-332256:-1
so has part: feature:332120-332256:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:324210-326004:-1:exon

position:332256:-1
position: 332256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332120-332256:-1:exon

position:332120:-1
position: 332120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324210-326004:-1:exon

LOC101743840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743840
product: Poxin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_038016544.1
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(324210..326004,326108..326299,327385..327498,328232..328384,331198..331808))
location: region:324210-331808:-1
so has part: feature:331198-331808:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:324210-326004:-1:exon

position:331808:-1
position: 331808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331198-331808:-1:exon

position:331198:-1
position: 331198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324210-326004:-1:exon

LOC101743840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743840
product: Poxin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_021349785.2
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(324210..326004,326108..326299,327385..327498,328232..328384,329874..329930))
location: region:324210-329930:-1
so has part: feature:329874-329930:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:324210-326004:-1:exon

position:329930:-1
position: 329930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329874-329930:-1:exon

position:329874:-1
position: 329874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324210-326004:-1:exon

LOC101743840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poxin isoform X2
translation: MNGVVCLWSKTAMSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPRLALVLDGRQLAHYYLHNVIVDVEYL
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(325738..326004,326108..326299,327385..327498,328232..328384,333809..333835))
location: region:325738-333835:-1
so has part: feature:333809-333835:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:325738-326004:-1:exon

XP_037872470.1
type: Protein
SIO_000068: ncbiprotein

position:325738:-1
position: 325738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333835:-1
position: 333835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333809-333835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325738-326004:-1:exon

LOC101743840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poxin isoform X3
translation: MKTAMSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPRLALVLDGRQLAHYYLHNVIVDVEYL
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(325738..326004,326108..326299,327385..327498,328232..328384,332433..332435))
location: region:325738-332435:-1
so has part: feature:332433-332435:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:325738-326004:-1:exon

XP_037872471.1
type: Protein
SIO_000068: ncbiprotein

position:332435:-1
position: 332435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332433-332435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325738-326004:-1:exon

LOC101743840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poxin isoform X1
translation: MTGIVELDLRMLKKKTAMSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPRLALVLDGRQLAHYYLHNVIVDVEYL
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(325738..326004,326108..326299,327385..327498,328232..328384,329874..329915))
location: region:325738-329915:-1
so has part: feature:329874-329915:-1:exon
so has part: feature:328232-328384:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:325738-326004:-1:exon

XP_021205460.1
type: Protein
SIO_000068: ncbiprotein

position:329915:-1
position: 329915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329874-329915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328232-328384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325738-326004:-1:exon

LOC101743840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poxin isoform X4
translation: MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPRLALVLDGRQLAHYYLHNVIVDVEYL
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(325738..326004,326108..326299,327385..327498,328232..328375))
location: region:325738-328375:-1
so has part: feature:328232-328375:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:325738-326004:-1:exon

XP_037872472.1
type: Protein
SIO_000068: ncbiprotein

position:328375:-1
position: 328375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328232-328375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325738-326004:-1:exon

LOC101743840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poxin isoform X4
translation: MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYIAGTPIVDQRGGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPRLALVLDGRQLAHYYLHNVIVDVEYL
SIO_010081: LOC101743840
subclass of: SO_0000673
so part of: LOC101743840
location: complement(join(325738..326004,326108..326299,327385..327498,328232..328375))
location: region:325738-328375:-1
so has part: feature:328232-328375:-1:exon
so has part: feature:327385-327498:-1:exon
so has part: feature:326108-326299:-1:exon
so has part: feature:325738-326004:-1:exon

XP_037872473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328232-328375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327385-327498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326108-326299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325738-326004:-1:exon

LOC101743691
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(334897..338795)
location: region:334897-338795:-1
so has part: feature:334897-338795:-1:exon
subclass of: SO_0000010

101743691
type: Gene
SIO_000068: ncbigene

position:334897:-1
position: 334897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338795:-1
position: 338795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334897-338795:-1:exon

LOC101743691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743691
product: protein GUCD1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_004928962.4
SIO_010081: LOC101743691
subclass of: SO_0000673
so part of: LOC101743691
location: complement(join(334897..335223,335534..335721,336390..336480,337051..337243,338639..338795))
location: region:334897-338795:-1
so has part: feature:338639-338795:-1:exon
so has part: feature:337051-337243:-1:exon
so has part: feature:336390-336480:-1:exon
so has part: feature:335534-335721:-1:exon
so has part: feature:334897-335223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338639-338795:-1:exon

position:338639:-1
position: 338639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337051-337243:-1:exon

position:337051:-1
position: 337051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337243:-1
position: 337243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336390-336480:-1:exon

position:336390:-1
position: 336390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336480:-1
position: 336480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335534-335721:-1:exon

position:335534:-1
position: 335534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335721:-1
position: 335721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334897-335223:-1:exon

position:335223:-1
position: 335223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743691
product: protein GUCD1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_021349786.1
SIO_010081: LOC101743691
subclass of: SO_0000673
so part of: LOC101743691
location: complement(join(334897..335223,335534..335721,336390..336480,337051..337243,338514..338562,338639..338779))
location: region:334897-338779:-1
so has part: feature:338639-338779:-1:exon
so has part: feature:338514-338562:-1:exon
so has part: feature:337051-337243:-1:exon
so has part: feature:336390-336480:-1:exon
so has part: feature:335534-335721:-1:exon
so has part: feature:334897-335223:-1:exon

position:338779:-1
position: 338779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338639-338779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338514-338562:-1:exon

position:338514:-1
position: 338514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338562:-1
position: 338562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337051-337243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336390-336480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335534-335721:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334897-335223:-1:exon

LOC101743691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GUCD1 isoform X1
translation: MLKNMSDEGRRSVHIEHKVEHFQQRYYWDCGVSCIIMLLSNKQREDFLARFNEICEDEGFGESTWTIDLCYLLKRFHIKHCMYTIFLGVNEDYRRHGYYDRIMHLDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAGLLSCDLCKHNKLKAEFRRCFGSNYYRGHYVLLVGHTARRLLYRDPALSPRLCATAPRRLQQARLTSGTDHDIIFIYNSYR
SIO_010081: LOC101743691
subclass of: SO_0000673
so part of: LOC101743691
location: complement(join(335031..335223,335534..335721,336390..336480,337051..337243,338639..338669))
location: region:335031-338669:-1
so has part: feature:338639-338669:-1:exon
so has part: feature:337051-337243:-1:exon
so has part: feature:336390-336480:-1:exon
so has part: feature:335534-335721:-1:exon
so has part: feature:335031-335223:-1:exon

XP_004929019.1
type: Protein
SIO_000068: ncbiprotein

position:335031:-1
position: 335031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338669:-1
position: 338669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338639-338669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337051-337243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336390-336480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335534-335721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335031-335223:-1:exon

LOC101743691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GUCD1 isoform X2
translation: MLLSNKQREDFLARFNEICEDEGFGESTWTIDLCYLLKRFHIKHCMYTIFLGVNEDYRRHGYYDRIMHLDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAGLLSCDLCKHNKLKAEFRRCFGSNYYRGHYVLLVGHTARRLLYRDPALSPRLCATAPRRLQQARLTSGTDHDIIFIYNSYR
SIO_010081: LOC101743691
subclass of: SO_0000673
so part of: LOC101743691
location: complement(join(335031..335223,335534..335721,336390..336480,337051..337166))
location: region:335031-337166:-1
so has part: feature:337051-337166:-1:exon
so has part: feature:336390-336480:-1:exon
so has part: feature:335534-335721:-1:exon
so has part: feature:335031-335223:-1:exon

XP_021205461.1
type: Protein
SIO_000068: ncbiprotein

position:337166:-1
position: 337166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337051-337166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336390-336480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335534-335721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335031-335223:-1:exon

LOC101743462
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 339293..344271
location: region:339293-344271:1
so has part: feature:339293-344271:1:exon
subclass of: SO_0000010

101743462
type: Gene
SIO_000068: ncbigene

position:339293:1
position: 339293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344271:1
position: 344271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339293-344271:1:exon

LOC101743462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743462
product: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_004928960.4
SIO_010081: LOC101743462
subclass of: SO_0000673
so part of: LOC101743462
location: join(339293..339555,339779..339928,340534..340666,341442..341580,342014..342102,343297..343408,344123..344271)
location: region:339293-344271:1
so has part: feature:339293-339555:1:exon
so has part: feature:339779-339928:1:exon
so has part: feature:340534-340666:1:exon
so has part: feature:341442-341580:1:exon
so has part: feature:342014-342102:1:exon
so has part: feature:343297-343408:1:exon
so has part: feature:344123-344271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339293-339555:1:exon

position:339555:1
position: 339555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339779-339928:1:exon

position:339779:1
position: 339779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339928:1
position: 339928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340534-340666:1:exon

position:340534:1
position: 340534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340666:1
position: 340666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341442-341580:1:exon

position:341442:1
position: 341442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341580:1
position: 341580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342014-342102:1:exon

position:342014:1
position: 342014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342102:1
position: 342102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343297-343408:1:exon

position:343297:1
position: 343297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343408:1
position: 343408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344123-344271:1:exon

position:344123:1
position: 344123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
translation: MALKRGLFRLAETYRPSRPHIRARLLATQSAANNEERQSKNQTHFGFQTVDENEKTKKVHEVFETVAGKYDLMNDVMSFGIHRVWKDIFMARLAPMPETNLLDMAGGTGDITFRYIKYLQNLRSKPTEGARSSVTVCDINQAMLDVGKVRAERLGYTKESSGVDIDWLCADAEQLPVADDTYTAYTIAFGIRNCTHIDKVLEEAYRVLKPGGRFMCLEFSQIPNEALQWAYDQYSFQVIPVLGQLVAGQWKPYQYLVESIRQFPNQEKFKMMIEDAGFRQVAYENLTFGTVAIHSGFKI
SIO_010081: LOC101743462
subclass of: SO_0000673
so part of: LOC101743462
location: join(339381..339555,339779..339928,340534..340666,341442..341580,342014..342102,343297..343408,344123..344224)
location: region:339381-344224:1
so has part: feature:339381-339555:1:exon
so has part: feature:339779-339928:1:exon
so has part: feature:340534-340666:1:exon
so has part: feature:341442-341580:1:exon
so has part: feature:342014-342102:1:exon
so has part: feature:343297-343408:1:exon
so has part: feature:344123-344224:1:exon

XP_004929017.1
type: Protein
SIO_000068: ncbiprotein

position:339381:1
position: 339381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344224:1
position: 344224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339381-339555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339779-339928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340534-340666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341442-341580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342014-342102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343297-343408:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344123-344224:1:exon

LOC101743319
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344750..350845)
location: region:344750-350845:-1
so has part: feature:344750-350845:-1:exon
subclass of: SO_0000010

101743319
type: Gene
SIO_000068: ncbigene

position:344750:-1
position: 344750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350845:-1
position: 350845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344750-350845:-1:exon

LOC101743319
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743319
product: serine/arginine-rich splicing factor 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_012692743.3
SIO_010081: LOC101743319
subclass of: SO_0000673
so part of: LOC101743319
location: complement(join(344750..346446,347620..347738,348423..348499,349394..349757,350501..350845))
location: region:344750-350845:-1
so has part: feature:350501-350845:-1:exon
so has part: feature:349394-349757:-1:exon
so has part: feature:348423-348499:-1:exon
so has part: feature:347620-347738:-1:exon
so has part: feature:344750-346446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350501-350845:-1:exon

position:350501:-1
position: 350501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349394-349757:-1:exon

position:349394:-1
position: 349394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349757:-1
position: 349757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348423-348499:-1:exon

position:348423:-1
position: 348423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348499:-1
position: 348499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347620-347738:-1:exon

position:347620:-1
position: 347620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347738:-1
position: 347738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344750-346446:-1:exon

position:346446:-1
position: 346446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743319
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 1A
translation: MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPRDADDAVRARDGYDYDGYRLRVEFPRGGGGGGSRGSRGGGDRWGGRGAARGPPARRSEYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSRFRSHEGEVTYIRVKEDYGGGGGGGGGGGGDRSRSYSPRRRGTPTYSPVRRSYSRSRSRSRSRSHNY
SIO_010081: LOC101743319
subclass of: SO_0000673
so part of: LOC101743319
location: complement(join(347630..347738,348423..348499,349394..349757,350501..350679))
location: region:347630-350679:-1
so has part: feature:350501-350679:-1:exon
so has part: feature:349394-349757:-1:exon
so has part: feature:348423-348499:-1:exon
so has part: feature:347630-347738:-1:exon

XP_012548197.1
type: Protein
SIO_000068: ncbiprotein

position:347630:-1
position: 347630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350679:-1
position: 350679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350501-350679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349394-349757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348423-348499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347630-347738:-1:exon

LOC101742895
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 353442..355349
location: region:353442-355349:1
so has part: feature:353442-355349:1:exon
subclass of: SO_0000010

101742895
type: Gene
SIO_000068: ncbigene

position:353442:1
position: 353442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355349:1
position: 355349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353442-355349:1:exon

LOC101742895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742895
product: dynein light chain 2, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 649 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_004928957.3
SIO_010081: LOC101742895
subclass of: SO_0000673
so part of: LOC101742895
location: join(353442..353599,354365..354488,354653..355349)
location: region:353442-355349:1
so has part: feature:353442-353599:1:exon
so has part: feature:354365-354488:1:exon
so has part: feature:354653-355349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353442-353599:1:exon

position:353599:1
position: 353599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354365-354488:1:exon

position:354365:1
position: 354365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354488:1
position: 354488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354653-355349:1:exon

position:354653:1
position: 354653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
SIO_010081: LOC101742895
subclass of: SO_0000673
so part of: LOC101742895
location: join(354381..354488,354653..354814)
location: region:354381-354814:1
so has part: feature:354381-354488:1:exon
so has part: feature:354653-354814:1:exon

XP_004929014.1
type: Protein
SIO_000068: ncbiprotein

position:354381:1
position: 354381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354814:1
position: 354814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354381-354488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354653-354814:1:exon

PPO1
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: phenoloxidase subunit 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 360463..401096
location: region:360463-401096:1
so has part: feature:360463-401096:1:exon
subclass of: SO_0000010

692758
type: Gene
SIO_000068: ncbigene

position:360463:1
position: 360463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401096:1
position: 401096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360463-401096:1:exon

PPO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
product: phenoloxidase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 122 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038016198.1
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(360463..360617,361211..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..372278,398652..401096)
location: region:360463-401096:1
so has part: feature:360463-360617:1:exon
so has part: feature:361211-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-372278:1:exon
so has part: feature:398652-401096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360463-360617:1:exon

position:360617:1
position: 360617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361211-361328:1:exon

position:361211:1
position: 361211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361328:1
position: 361328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362471-362663:1:exon

position:362471:1
position: 362471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362663:1
position: 362663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363250-363352:1:exon

position:363250:1
position: 363250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363352:1
position: 363352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363635-363755:1:exon

position:363635:1
position: 363635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363755:1
position: 363755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364967-365172:1:exon

position:364967:1
position: 364967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365172:1
position: 365172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:366755-366883:1:exon

position:366755:1
position: 366755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366883:1
position: 366883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:367210-367333:1:exon

position:367210:1
position: 367210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367333:1
position: 367333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:367636-367800:1:exon

position:367636:1
position: 367636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367800:1
position: 367800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368200-368328:1:exon

position:368200:1
position: 368200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368328:1
position: 368328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:369024-369202:1:exon

position:369024:1
position: 369024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369202:1
position: 369202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:371054-371199:1:exon

position:371054:1
position: 371054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371199:1
position: 371199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:371741-371976:1:exon

position:371741:1
position: 371741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371976:1
position: 371976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:372063-372278:1:exon

position:372063:1
position: 372063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372278:1
position: 372278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:398652-401096:1:exon

position:398652:1
position: 398652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
product: phenoloxidase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 115 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038016197.1
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(360463..360617,361211..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..372274,374069..374595)
location: region:360463-374595:1
so has part: feature:360463-360617:1:exon
so has part: feature:361211-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-372274:1:exon
so has part: feature:374069-374595:1:exon

position:374595:1
position: 374595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360463-360617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361211-361328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362471-362663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363250-363352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363635-363755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364967-365172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366755-366883:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367210-367333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367636-367800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368200-368328:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369024-369202:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371054-371199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371741-371976:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:372063-372274:1:exon

position:372274:1
position: 372274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:374069-374595:1:exon

position:374069:1
position: 374069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
product: phenoloxidase subunit 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001043870.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 78 substitutions, 6 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001043870.1
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(360605..360617,361211..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..373756)
location: region:360605-373756:1
so has part: feature:360605-360617:1:exon
so has part: feature:361211-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-373756:1:exon

position:360605:1
position: 360605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373756:1
position: 373756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360605-360617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361211-361328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362471-362663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363250-363352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363635-363755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364967-365172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366755-366883:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367210-367333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367636-367800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368200-368328:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369024-369202:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371054-371199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371741-371976:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:372063-373756:1:exon

PPO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenoloxidase subunit 1 isoform X1
translation: MSDAKNNLLLFFDRPSEPCFMQKGEENAVFEIPDNYYPEKYQRVSNAIGNRFGSDAGRMIPIRNIALPNLDLPMELPYNEQFSLFVPKHRKLAGRLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAESFPDKFMDPKVFRQAREVSSVVPSGARMPIVIPSNYTASDTEPEQRVAYFREDIGINLHHWHWHLVYPFDAADRAIVNKDRRGELFYYMHQQIIARYNVERMCNNLSRVRRYNNFRAAIEEGYFPKLDSTVASRAWPPRFAGTTIRDLDRPVDQIRSDVSELETWRDRFLQAIENMSVMLPNGRQLPLDEETGIDVLGNLMESSIISRNRPYYGDLHNMGHVFISYSHDPDHRHLEQFGVMGDSATAMRDPVFYRWHAYIDDIFHLYKYKLTPYGNDRLDFPNIRVSSVSIEGGGTPNTLNTLWEQSTVDLGRGMDFTPRGSVLARFTHLQHDEYNYVIEVNNTGGGSVMGMFRIFIAPTVDESGKPLSFDEQRKLMIELDKFSQGVKPGNNTIRRKSIDSSVTIPYERTFRNQADRPADPGTAGAAEFDFCGCGWPHHMLVPKGTTQGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDRPAPAATTLSDFLRPNMAVRDCIVRFTDRTRQRGQQGYIDSNRRQRSTEPCGCPSVNVDIDALIRKPYYYIPCKHKHHIF
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(361218..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..372274,374069..374201)
location: region:361218-374201:1
so has part: feature:361218-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-372274:1:exon
so has part: feature:374069-374201:1:exon

XP_037872125.1
type: Protein
SIO_000068: ncbiprotein

position:361218:1
position: 361218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374201:1
position: 374201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361218-361328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362471-362663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363250-363352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363635-363755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364967-365172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366755-366883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367210-367333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367636-367800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368200-368328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369024-369202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371054-371199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371741-371976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372063-372274:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:374069-374201:1:exon

PPO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
inference: similar to AA sequence (same species):RefSeq:NP_001037335.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: phenoloxidase subunit 1
translation: MSDAKNNLLLFFDRPSEPCFMQKGEENAVFEIPDNYYPEKYQRVSNAIGNRFGSDAGRMIPIRNIALPNLDLPMELPYNEQFSLFVPKHRKLAGRLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAESFPDKFMDPKVFRQAREVSSVVPSGARMPIVIPSNYTASDTEPEQRVAYFREDIGINLHHWHWHLVYPFDAADRAIVNKDRRGELFYYMHQQIIARYNVERMCNNLSRVRRYNNFRAAIEEGYFPKLDSTVASRAWPPRFAGTTIRDLDRPVDQIRSDVSELETWRDRFLQAIENMSVMLPNGRQLPLDEETGIDVLGNLMESSIISRNRPYYGDLHNMGHVFISYSHDPDHRHLEQFGVMGDSATAMRDPVFYRWHAYIDDIFHLYKYKLTPYGNDRLDFPNIRVSSVSIEGGGTPNTLNTLWEQSTVDLGRGMDFTPRGSVLARFTHLQHDEYNYVIEVNNTGGSSVMGMFRIFIAPTVDESGKPFSFDEQRKLMIELDKFSQGVKPGNNTIRRKSIDSSVTIPYERTFRNQADRPADPGTAGAAEFDFCGCGWPHHMLVPKGTTQGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDRPAPAATTLSDFLRPNMAVRDCIVRFTDRTRQRGQQG
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(361218..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..372278)
location: region:361218-372278:1
so has part: feature:361218-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-372278:1:exon

NP_001037335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361218-361328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362471-362663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363250-363352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363635-363755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364967-365172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366755-366883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367210-367333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367636-367800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368200-368328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369024-369202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371054-371199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371741-371976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372063-372278:1:exon

PPO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q27451.2); glycosylation site
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: 364988..364990
location: region:364988-364990:1
so has part: feature:364988-364990:1:exon

position:364988:1
position: 364988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364990:1
position: 364990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364988-364990:1:exon

PPO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q27451.2); glycosylation site
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: 366780..366782
location: region:366780-366782:1
so has part: feature:366780-366782:1:exon

position:366780:1
position: 366780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366782:1
position: 366782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366780-366782:1:exon

PPO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q27451.2); glycosylation site
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: 367316..367318
location: region:367316-367318:1
so has part: feature:367316-367318:1:exon

position:367316:1
position: 367316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367318:1
position: 367318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367316-367318:1:exon

PPO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q27451.2); glycosylation site
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: 371064..371066
location: region:371064-371066:1
so has part: feature:371064-371066:1:exon

position:371064:1
position: 371064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371066:1
position: 371066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371064-371066:1:exon

PPO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q27451.2); glycosylation site
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: 371752..371754
location: region:371752-371754:1
so has part: feature:371752-371754:1:exon

position:371752:1
position: 371752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371754:1
position: 371754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371752-371754:1:exon

PPO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmPPO1
alternative label: pro-PO1
gene: PPO1
gene synonym: BmPPO1; pro-PO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenoloxidase subunit 1 isoform X2
translation: MSDAKNNLLLFFDRPSEPCFMQKGEENAVFEIPDNYYPEKYQRVSNAIGNRFGSDAGRMIPIRNIALPNLDLPMELPYNEQFSLFVPKHRKLAGRLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAESFPDKFMDPKVFRQAREVSSVVPSGARMPIVIPSNYTASDTEPEQRVAYFREDIGINLHHWHWHLVYPFDAADRAIVNKDRRGELFYYMHQQIIARYNVERMCNNLSRVRRYNNFRAAIEEGYFPKLDSTVASRAWPPRFAGTTIRDLDRPVDQIRSDVSELETWRDRFLQAIENMSVMLPNGRQLPLDEETGIDVLGNLMESSIISRNRPYYGDLHNMGHVFISYSHDPDHRHLEQFGVMGDSATAMRDPVFYRWHAYIDDIFHLYKYKLTPYGNDRLDFPNIRVSSVSIEGGGTPNTLNTLWEQSTVDLGRGMDFTPRGSVLARFTHLQHDEYNYVIEVNNTGGGSVMGMFRIFIAPTVDESGKPLSFDEQRKLMIELDKFSQGVKPGNNTIRRKSIDSSVTIPYERTFRNQADRPADPGTAGAAEFDFCGCGWPHHMLVPKGTTQGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDRPAPAATTLSDFLRPNMAVRDCIVRFTDRTRQRGQQG
SIO_010081: PPO1
subclass of: SO_0000673
so part of: PPO1
location: join(361218..361328,362471..362663,363250..363352,363635..363755,364967..365172,366755..366883,367210..367333,367636..367800,368200..368328,369024..369202,371054..371199,371741..371976,372063..372278)
location: region:361218-372278:1
so has part: feature:361218-361328:1:exon
so has part: feature:362471-362663:1:exon
so has part: feature:363250-363352:1:exon
so has part: feature:363635-363755:1:exon
so has part: feature:364967-365172:1:exon
so has part: feature:366755-366883:1:exon
so has part: feature:367210-367333:1:exon
so has part: feature:367636-367800:1:exon
so has part: feature:368200-368328:1:exon
so has part: feature:369024-369202:1:exon
so has part: feature:371054-371199:1:exon
so has part: feature:371741-371976:1:exon
so has part: feature:372063-372278:1:exon

XP_037872126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361218-361328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362471-362663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363250-363352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363635-363755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364967-365172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366755-366883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367210-367333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367636-367800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368200-368328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369024-369202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371054-371199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371741-371976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372063-372278:1:exon

LOC101742744
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 381788..401093
location: region:381788-401093:1
so has part: feature:381788-401093:1:exon
subclass of: SO_0000010

101742744
type: Gene
SIO_000068: ncbigene

position:381788:1
position: 381788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401093:1
position: 401093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381788-401093:1:exon

LOC101742744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742744
product: phenoloxidase subunit 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 82 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_012692758.3
SIO_010081: LOC101742744
subclass of: SO_0000673
so part of: LOC101742744
location: join(381788..381944,382031..382141,385150..385342,386044..386146,387398..387518,387815..388020,393221..393349,393700..393823,394158..394322,394700..394828,395192..395370,396931..397076,398114..398349,398436..398651)
location: region:381788-398651:1
so has part: feature:381788-381944:1:exon
so has part: feature:382031-382141:1:exon
so has part: feature:385150-385342:1:exon
so has part: feature:386044-386146:1:exon
so has part: feature:387398-387518:1:exon
so has part: feature:387815-388020:1:exon
so has part: feature:393221-393349:1:exon
so has part: feature:393700-393823:1:exon
so has part: feature:394158-394322:1:exon
so has part: feature:394700-394828:1:exon
so has part: feature:395192-395370:1:exon
so has part: feature:396931-397076:1:exon
so has part: feature:398114-398349:1:exon
so has part: feature:398436-398651:1:exon

position:398651:1
position: 398651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381788-381944:1:exon

position:381944:1
position: 381944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382031-382141:1:exon

position:382031:1
position: 382031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382141:1
position: 382141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385150-385342:1:exon

position:385150:1
position: 385150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385342:1
position: 385342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386044-386146:1:exon

position:386044:1
position: 386044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386146:1
position: 386146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387398-387518:1:exon

position:387398:1
position: 387398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387518:1
position: 387518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:387815-388020:1:exon

position:387815:1
position: 387815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388020:1
position: 388020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:393221-393349:1:exon

position:393221:1
position: 393221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393349:1
position: 393349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:393700-393823:1:exon

position:393700:1
position: 393700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393823:1
position: 393823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:394158-394322:1:exon

position:394158:1
position: 394158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394322:1
position: 394322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394700-394828:1:exon

position:394700:1
position: 394700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394828:1
position: 394828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:395192-395370:1:exon

position:395192:1
position: 395192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395370:1
position: 395370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:396931-397076:1:exon

position:396931:1
position: 396931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397076:1
position: 397076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:398114-398349:1:exon

position:398114:1
position: 398114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398349:1
position: 398349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:398436-398651:1:exon

position:398436:1
position: 398436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742744
product: phenoloxidase subunit 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 82 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_038016355.1
SIO_010081: LOC101742744
subclass of: SO_0000673
so part of: LOC101742744
location: join(382031..382141,385150..385342,386044..386146,387398..387518,387815..388020,393221..393349,393700..393823,394158..394322,394700..394828,395192..395370,396931..397076,398114..398349,398436..401093)
location: region:382031-401093:1
so has part: feature:382031-382141:1:exon
so has part: feature:385150-385342:1:exon
so has part: feature:386044-386146:1:exon
so has part: feature:387398-387518:1:exon
so has part: feature:387815-388020:1:exon
so has part: feature:393221-393349:1:exon
so has part: feature:393700-393823:1:exon
so has part: feature:394158-394322:1:exon
so has part: feature:394700-394828:1:exon
so has part: feature:395192-395370:1:exon
so has part: feature:396931-397076:1:exon
so has part: feature:398114-398349:1:exon
so has part: feature:398436-401093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382031-382141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385150-385342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386044-386146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387398-387518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387815-388020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393221-393349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393700-393823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394158-394322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394700-394828:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395192-395370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396931-397076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398114-398349:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:398436-401093:1:exon

LOC101742744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenoloxidase subunit 1-like
translation: MSDAKKNLLLFFDRPSEPCFMQKGEDKAVFDIPDNYYPEKYQRVSNAISNRFGSDAGRMIPIRNIALPNLDLPMELPYNEQFSLFVPKHRQMAGKLIDIFMGMRDVEDLQSICAYCQLRINPYMFNYCLSVAILHRSDTKGLQIPTFAECFPDKFMDPKVFRKAREVTSVVPTGARMPIVIPSNYTASDAEPEQRVAYFREDIGTNLHHWHWHLVYPFDAADRALVNKDRRGELFYYMHQQMIARFNIERFCNDLRKVETYSDFRGPIKEGYFPKMDSQVASRAWPPRFAGSFLRDLDRPIDQIRIDISELEIWRDRFLKAIEDMAVILPNGRQMPLDEETGIDVLGNLMESSTISINRPYYGDLHNMGHVFIGYCHDPDHRHLEPFGVMGDLATTMRDPLFFRWHGYIDSVFHLYKYKLTPYSDDRLIFPDIRVRSISLDGKGAPNMLNTFWEQSTVDLARGLDFSPRGSVLARFTHLQHEDYSYVIEVNNTGRSSVMGMFRIFIAPTLDENKRPLNFDEQRKLMIELDKFSQGLKPGNNTVRRRSVDSSVTVPFERTFSNQADRPGNPGSPESAEFDFCGCGWPQHMLIPKGTTEGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDRPAPAATTLSDFLRPNMAVRDCIVRFTDRTRQRGQQE
SIO_010081: LOC101742744
subclass of: SO_0000673
so part of: LOC101742744
location: join(382031..382141,385150..385342,386044..386146,387398..387518,387815..388020,393221..393349,393700..393823,394158..394322,394700..394828,395192..395370,396931..397076,398114..398349,398436..398651)
location: region:382031-398651:1
so has part: feature:382031-382141:1:exon
so has part: feature:385150-385342:1:exon
so has part: feature:386044-386146:1:exon
so has part: feature:387398-387518:1:exon
so has part: feature:387815-388020:1:exon
so has part: feature:393221-393349:1:exon
so has part: feature:393700-393823:1:exon
so has part: feature:394158-394322:1:exon
so has part: feature:394700-394828:1:exon
so has part: feature:395192-395370:1:exon
so has part: feature:396931-397076:1:exon
so has part: feature:398114-398349:1:exon
so has part: feature:398436-398651:1:exon

XP_037872283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382031-382141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385150-385342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386044-386146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387398-387518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387815-388020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393221-393349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393700-393823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394158-394322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394700-394828:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395192-395370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396931-397076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398114-398349:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:398436-398651:1:exon

LOC101742744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenoloxidase subunit 1-like
translation: MSDAKKNLLLFFDRPSEPCFMQKGEDKAVFDIPDNYYPEKYQRVSNAISNRFGSDAGRMIPIRNIALPNLDLPMELPYNEQFSLFVPKHRQMAGKLIDIFMGMRDVEDLQSICAYCQLRINPYMFNYCLSVAILHRSDTKGLQIPTFAECFPDKFMDPKVFRKAREVTSVVPTGARMPIVIPSNYTASDAEPEQRVAYFREDIGTNLHHWHWHLVYPFDAADRALVNKDRRGELFYYMHQQMIARFNIERFCNDLRKVETYSDFRGPIKEGYFPKMDSQVASRAWPPRFAGSFLRDLDRPIDQIRIDISELEIWRDRFLKAIEDMAVILPNGRQMPLDEETGIDVLGNLMESSTISINRPYYGDLHNMGHVFIGYCHDPDHRHLEPFGVMGDLATTMRDPLFFRWHGYIDSVFHLYKYKLTPYSDDRLIFPDIRVRSISLDGKGAPNMLNTFWEQSTVDLARGLDFSPRGSVLARFTHLQHEDYSYVIEVNNTGRSSVMGMFRIFIAPTLDENKRPLNFDEQRKLMIELDKFSQGLKPGNNTVRRRSVDSSVTVPFERTFSNQADRPGNPGSPESAEFDFCGCGWPQHMLIPKGTTEGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDRPAPAATTLSDFLRPNMAVRDCIVRFTDRTRQRGQQE
SIO_010081: LOC101742744
subclass of: SO_0000673
so part of: LOC101742744
location: join(382031..382141,385150..385342,386044..386146,387398..387518,387815..388020,393221..393349,393700..393823,394158..394322,394700..394828,395192..395370,396931..397076,398114..398349,398436..398651)
location: region:382031-398651:1
so has part: feature:382031-382141:1:exon
so has part: feature:385150-385342:1:exon
so has part: feature:386044-386146:1:exon
so has part: feature:387398-387518:1:exon
so has part: feature:387815-388020:1:exon
so has part: feature:393221-393349:1:exon
so has part: feature:393700-393823:1:exon
so has part: feature:394158-394322:1:exon
so has part: feature:394700-394828:1:exon
so has part: feature:395192-395370:1:exon
so has part: feature:396931-397076:1:exon
so has part: feature:398114-398349:1:exon
so has part: feature:398436-398651:1:exon

XP_012548212.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382031-382141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385150-385342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386044-386146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387398-387518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387815-388020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393221-393349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393700-393823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394158-394322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394700-394828:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395192-395370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396931-397076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398114-398349:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:398436-398651:1:exon

LOC101742506
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(404638..408385)
location: region:404638-408385:-1
so has part: feature:404638-408385:-1:exon
subclass of: SO_0000010

101742506
type: Gene
SIO_000068: ncbigene

position:404638:-1
position: 404638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408385:-1
position: 408385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404638-408385:-1:exon

LOC101742506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742506
product: uncharacterized LOC101742506, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_004928953.3
SIO_010081: LOC101742506
subclass of: SO_0000673
so part of: LOC101742506
location: complement(join(404638..405273,406021..406169,408271..408385))
location: region:404638-408385:-1
so has part: feature:408271-408385:-1:exon
so has part: feature:406021-406169:-1:exon
so has part: feature:404638-405273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408271-408385:-1:exon

position:408271:-1
position: 408271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406021-406169:-1:exon

position:406021:-1
position: 406021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406169:-1
position: 406169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404638-405273:-1:exon

position:405273:-1
position: 405273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742506
product: uncharacterized LOC101742506, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_021349851.2
SIO_010081: LOC101742506
subclass of: SO_0000673
so part of: LOC101742506
location: complement(join(404638..405273,408271..408349))
location: region:404638-408349:-1
so has part: feature:408271-408349:-1:exon
so has part: feature:404638-405273:-1:exon

position:408349:-1
position: 408349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408271-408349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404638-405273:-1:exon

LOC101742506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742506 isoform X2
translation: MALTQQILLVIIGVTFVYSAPLTPGLLSNVLSSPLPVLNNKPLDILNKPLGILGDKPVSGALNTLGLRTGQSADHAGLIPGLTSASGSLDDLGLNDLSEALGLNSGISSLQDPHLLSKPLNALGVLNSKGQKVPDAIGLEPKPGPVGGSSDEKPALGLIDHSDEYHTAER
SIO_010081: LOC101742506
subclass of: SO_0000673
so part of: LOC101742506
location: complement(join(404779..405273,408271..408288))
location: region:404779-408288:-1
so has part: feature:408271-408288:-1:exon
so has part: feature:404779-405273:-1:exon

XP_021205526.1
type: Protein
SIO_000068: ncbiprotein

position:404779:-1
position: 404779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408288:-1
position: 408288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408271-408288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404779-405273:-1:exon

LOC101742506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742506 isoform X1
translation: MTFAIKIHFCGFPLVILPLTHTASESISPLDIMAFTQQILLVIIGVTFVYSAPLTPGLLSNVLSSPLPVLNNKPLDILNKPLGILGDKPVSGALNTLGLRTGQSADHAGLIPGLTSASGSLDDLGLNDLSEALGLNSGISSLQDPHLLSKPLNALGVLNSKGQKVPDAIGLEPKPGPVGGSSDEKPALGLIDHSDEYHTAER
SIO_010081: LOC101742506
subclass of: SO_0000673
so part of: LOC101742506
location: complement(join(404779..405273,406021..406134))
location: region:404779-406134:-1
so has part: feature:406021-406134:-1:exon
so has part: feature:404779-405273:-1:exon

XP_004929010.1
type: Protein
SIO_000068: ncbiprotein

position:406134:-1
position: 406134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406021-406134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404779-405273:-1:exon

LOC101742354
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 409266..410356
location: region:409266-410356:1
so has part: feature:409266-410356:1:exon
subclass of: SO_0000010

101742354
type: Gene
SIO_000068: ncbigene

position:409266:1
position: 409266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410356:1
position: 410356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409266-410356:1:exon

LOC101742354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742354
product: uncharacterized LOC101742354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038016464.1
SIO_010081: LOC101742354
subclass of: SO_0000673
so part of: LOC101742354
location: join(409266..409423,410093..410356)
location: region:409266-410356:1
so has part: feature:409266-409423:1:exon
so has part: feature:410093-410356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409266-409423:1:exon

position:409423:1
position: 409423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410093-410356:1:exon

position:410093:1
position: 410093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742354
translation: MAFAIKIHFCGFPLVIIILPLTHTASESISPLDIMALTHQILLVIIGVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGDKPVSGALNTLGLRPARSVDHVELVIH
SIO_010081: LOC101742354
subclass of: SO_0000673
so part of: LOC101742354
location: join(409304..409423,410093..410320)
location: region:409304-410320:1
so has part: feature:409304-409423:1:exon
so has part: feature:410093-410320:1:exon

XP_037872392.1
type: Protein
SIO_000068: ncbiprotein

position:409304:1
position: 409304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410320:1
position: 410320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409304-409423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410093-410320:1:exon

LOC101742220
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414742..419094
location: region:414742-419094:1
so has part: feature:414742-419094:1:exon
subclass of: SO_0000010

101742220
type: Gene
SIO_000068: ncbigene

position:414742:1
position: 414742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419094:1
position: 419094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414742-419094:1:exon

LOC101742220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742220
product: putative uncharacterized protein DDB_G0282133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_004928952.4
SIO_010081: LOC101742220
subclass of: SO_0000673
so part of: LOC101742220
location: join(414742..414893,416290..416482,417186..419094)
location: region:414742-419094:1
so has part: feature:414742-414893:1:exon
so has part: feature:416290-416482:1:exon
so has part: feature:417186-419094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414742-414893:1:exon

position:414893:1
position: 414893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416290-416482:1:exon

position:416290:1
position: 416290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416482:1
position: 416482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417186-419094:1:exon

position:417186:1
position: 417186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein DDB_G0282133
translation: MAWIVQLILACLFSLNVSCHFYRINNAVRTPETPFRNSDPVNYLQKLLYGYGTGYDYYDEDFPGGSYNIPDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQSTILPQTSALNNDASYIIRYANKQPNEFSNVPNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYEKQNIQPIILVLANPYMNRPSSDMSTTNPKKGQTFNNKPNRGEILNTDKNVKRGEHLNTEENLQNSAEGDNDLEDDVMKSIIAALEDLPAITDQDFKVIKIITNNAPTENSKNSIQLNRDAGNTENPMSSDEISTESSVKQNVPTIRNRANGIVNNNSVLDGKNVDNPANVRSNTLDTPFQVDDGTELYRIISIASEKDLNDLRKYITVNGKGPSNEKVHIGDTINTPLKYQSEDTLDTQKTANTSDASGVMNSISKENIASNVETKPLVEKLPTTNANTASIEESKIMGVLANARAFGKSSSSFGDKVEDIDGYVVQPAVMITSFKDNN
SIO_010081: LOC101742220
subclass of: SO_0000673
so part of: LOC101742220
location: join(414876..414893,416290..416482,417186..418951)
location: region:414876-418951:1
so has part: feature:414876-414893:1:exon
so has part: feature:416290-416482:1:exon
so has part: feature:417186-418951:1:exon

XP_004929009.2
type: Protein
SIO_000068: ncbiprotein

position:414876:1
position: 414876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418951:1
position: 418951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414876-414893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416290-416482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417186-418951:1:exon

LOC101735336
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101735336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423057..590723)
location: region:423057-590723:-1
so has part: feature:423057-590723:-1:exon
subclass of: SO_0000010

101735336
type: Gene
SIO_000068: ncbigene

position:423057:-1
position: 423057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590723:-1
position: 590723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423057-590723:-1:exon

LOC101735336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735336
product: calcium/calmodulin-dependent protein kinase kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038016235.1
SIO_010081: LOC101735336
subclass of: SO_0000673
so part of: LOC101735336
location: complement(join(423057..423538,423913..423991,424327..424478,424888..425055,425602..425817,429069..429259,441209..441356,442521..442691,443513..443566,446634..446826,454660..454737,535464..535531,590516..590723))
location: region:423057-590723:-1
so has part: feature:590516-590723:-1:exon
so has part: feature:535464-535531:-1:exon
so has part: feature:454660-454737:-1:exon
so has part: feature:446634-446826:-1:exon
so has part: feature:443513-443566:-1:exon
so has part: feature:442521-442691:-1:exon
so has part: feature:441209-441356:-1:exon
so has part: feature:429069-429259:-1:exon
so has part: feature:425602-425817:-1:exon
so has part: feature:424888-425055:-1:exon
so has part: feature:424327-424478:-1:exon
so has part: feature:423913-423991:-1:exon
so has part: feature:423057-423538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590516-590723:-1:exon

position:590516:-1
position: 590516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535464-535531:-1:exon

position:535464:-1
position: 535464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535531:-1
position: 535531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454660-454737:-1:exon

position:454660:-1
position: 454660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454737:-1
position: 454737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446634-446826:-1:exon

position:446634:-1
position: 446634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446826:-1
position: 446826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443513-443566:-1:exon

position:443513:-1
position: 443513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443566:-1
position: 443566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442521-442691:-1:exon

position:442521:-1
position: 442521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442691:-1
position: 442691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441209-441356:-1:exon

position:441209:-1
position: 441209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441356:-1
position: 441356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429069-429259:-1:exon

position:429069:-1
position: 429069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429259:-1
position: 429259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:425602-425817:-1:exon

position:425602:-1
position: 425602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425817:-1
position: 425817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:424888-425055:-1:exon

position:424888:-1
position: 424888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425055:-1
position: 425055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:424327-424478:-1:exon

position:424327:-1
position: 424327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424478:-1
position: 424478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:423913-423991:-1:exon

position:423913:-1
position: 423913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423991:-1
position: 423991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:423057-423538:-1:exon

position:423538:-1
position: 423538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101735336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101735336
product: calcium/calmodulin-dependent protein kinase kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_038016236.1
SIO_010081: LOC101735336
subclass of: SO_0000673
so part of: LOC101735336
location: complement(join(423057..423538,423913..423991,424327..424478,424888..425055,425602..425817,429069..429259,441209..441356,442521..442691,443513..443566,446634..446826,454660..454737,510398..510785))
location: region:423057-510785:-1
so has part: feature:510398-510785:-1:exon
so has part: feature:454660-454737:-1:exon
so has part: feature:446634-446826:-1:exon
so has part: feature:443513-443566:-1:exon
so has part: feature:442521-442691:-1:exon
so has part: feature:441209-441356:-1:exon
so has part: feature:429069-429259:-1:exon
so has part: feature:425602-425817:-1:exon
so has part: feature:424888-425055:-1:exon
so has part: feature:424327-424478:-1:exon
so has part: feature:423913-423991:-1:exon
so has part: feature:423057-423538:-1:exon

position:510785:-1
position: 510785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510398-510785:-1:exon

position:510398:-1
position: 510398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454660-454737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446634-446826:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443513-443566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442521-442691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441209-441356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429069-429259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425602-425817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424888-425055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:424327-424478:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:423913-423991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:423057-423538:-1:exon

LOC101735336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase kinase 2 isoform X1
translation: MSERKSGGGAVSVLPISGAIRRSRPPKLADIQRHSAVDVSNGSNRELENNRWQPPTTHGLSAYPATGDRSTLLKAHAAKSAECSGQSSPRPRRAPRESRRVSLAQASGYVQLNQYRLLEPIGQGSYGIVKLAYNEEDDTHYAMKILSKRKLMRRAGLFGRTPPRRPGPGPPPDPLQRVYREIAVLKKLDHANVVKLVEVLDDPAEDQLYLVFQLLEGGPVIDIPTDNPLKEDLARKYFRDTLLGVEYLHFQRIAHRDIKPANLLLREGGVQVADLGACGELAGAGRVSGAVGTPAFRAPETFAGPDNYDGQAADIWSLGVTLYAMVTGRVPWVGTSVVELQRKILNDPLTYPARYQPSKSLRHLLSRMLDKDPAKRATMPEIKDDEWITAGGRDLLPSEQENCRLVEVTEEDMARVVTSIPNLSTLILIKTMLKKHSFQNPFLRSREGSTSRRESGSGKGEGEKTAAAKRSGLARAGRSLSAPGNYLTERQSSFDVALESVAERDQNQEKEKSPVKGEEESR
SIO_010081: LOC101735336
subclass of: SO_0000673
so part of: LOC101735336
location: complement(join(423518..423538,423913..423991,424327..424478,424888..425055,425602..425817,429069..429259,441209..441356,442521..442691,443513..443566,446634..446826,454660..454737,535464..535531,590516..590545))
location: region:423518-590545:-1
so has part: feature:590516-590545:-1:exon
so has part: feature:535464-535531:-1:exon
so has part: feature:454660-454737:-1:exon
so has part: feature:446634-446826:-1:exon
so has part: feature:443513-443566:-1:exon
so has part: feature:442521-442691:-1:exon
so has part: feature:441209-441356:-1:exon
so has part: feature:429069-429259:-1:exon
so has part: feature:425602-425817:-1:exon
so has part: feature:424888-425055:-1:exon
so has part: feature:424327-424478:-1:exon
so has part: feature:423913-423991:-1:exon
so has part: feature:423518-423538:-1:exon

XP_037872163.1
type: Protein
SIO_000068: ncbiprotein

position:423518:-1
position: 423518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590545:-1
position: 590545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590516-590545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535464-535531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454660-454737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446634-446826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443513-443566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442521-442691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441209-441356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429069-429259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425602-425817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:424888-425055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:424327-424478:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:423913-423991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:423518-423538:-1:exon

LOC101735336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101735336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase kinase 2 isoform X2
translation: MIMNGRVVETDAEKAGKSDRHSAVDVSNGSNRELENNRWQPPTTHGLSAYPATGDRSTLLKAHAAKSAECSGQSSPRPRRAPRESRRVSLAQASGYVQLNQYRLLEPIGQGSYGIVKLAYNEEDDTHYAMKILSKRKLMRRAGLFGRTPPRRPGPGPPPDPLQRVYREIAVLKKLDHANVVKLVEVLDDPAEDQLYLVFQLLEGGPVIDIPTDNPLKEDLARKYFRDTLLGVEYLHFQRIAHRDIKPANLLLREGGVQVADLGACGELAGAGRVSGAVGTPAFRAPETFAGPDNYDGQAADIWSLGVTLYAMVTGRVPWVGTSVVELQRKILNDPLTYPARYQPSKSLRHLLSRMLDKDPAKRATMPEIKDDEWITAGGRDLLPSEQENCRLVEVTEEDMARVVTSIPNLSTLILIKTMLKKHSFQNPFLRSREGSTSRRESGSGKGEGEKTAAAKRSGLARAGRSLSAPGNYLTERQSSFDVALESVAERDQNQEKEKSPVKGEEESR
SIO_010081: LOC101735336
subclass of: SO_0000673
so part of: LOC101735336
location: complement(join(423518..423538,423913..423991,424327..424478,424888..425055,425602..425817,429069..429259,441209..441356,442521..442691,443513..443566,446634..446826,454660..454737,510398..510456))
location: region:423518-510456:-1
so has part: feature:510398-510456:-1:exon
so has part: feature:454660-454737:-1:exon
so has part: feature:446634-446826:-1:exon
so has part: feature:443513-443566:-1:exon
so has part: feature:442521-442691:-1:exon
so has part: feature:441209-441356:-1:exon
so has part: feature:429069-429259:-1:exon
so has part: feature:425602-425817:-1:exon
so has part: feature:424888-425055:-1:exon
so has part: feature:424327-424478:-1:exon
so has part: feature:423913-423991:-1:exon
so has part: feature:423518-423538:-1:exon

XP_037872164.1
type: Protein
SIO_000068: ncbiprotein

position:510456:-1
position: 510456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510398-510456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454660-454737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446634-446826:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443513-443566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442521-442691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441209-441356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429069-429259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425602-425817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424888-425055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:424327-424478:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:423913-423991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:423518-423538:-1:exon

LOC110385674
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480782..486667)
location: region:480782-486667:-1
so has part: feature:480782-486667:-1:exon
subclass of: SO_0000010

110385674
type: Gene
SIO_000068: ncbigene

position:480782:-1
position: 480782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486667:-1
position: 486667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480782-486667:-1:exon

LOC110385674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385674
product: uncharacterized LOC110385674
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038016237.1
SIO_010081: LOC110385674
subclass of: SO_0000673
so part of: LOC110385674
location: complement(480782..486667)
location: region:480782-486667:-1
so has part: feature:480782-486667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480782-486667:-1:exon

LOC110385674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110385674
translation: MTTPGVPATQLALSQTSADIMAISLSTRIPEFWTEQPRAWYIRIESILAPQKLGDEVKFDIVVSKLPKEVIIQLTDFLAKPPDTGKFLALKTKLLSTFEESKSRQIERLIGEMELGDQKPSQLLRRMRELARDKVPDDTLRVLWQGHLPTTLRAILTVTETKDLDNLAMIADNVAEATRVNHISEVVNQQTSNMERPSTSDTSLILAEIAKLSVRMTNMEQSRSRQNYFDRNRDRSGSRSSSRRRTPQNPNWLCYYHYKFRQNAQKCVQPCAWKPSSEN
SIO_010081: LOC110385674
subclass of: SO_0000673
so part of: LOC110385674
location: complement(485033..485872)
location: region:485033-485872:-1
so has part: feature:485033-485872:-1:exon

XP_037872165.1
type: Protein
SIO_000068: ncbiprotein

position:485033:-1
position: 485033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485872:-1
position: 485872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485033-485872:-1:exon

LOC119629706
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 601313..603101
location: region:601313-603101:1
so has part: feature:601313-603101:1:exon
subclass of: SO_0000010

119629706
type: Gene
SIO_000068: ncbigene

position:601313:1
position: 601313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603101:1
position: 603101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601313-603101:1:exon

LOC119629706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629706
product: uncharacterized LOC119629706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038016512.1
SIO_010081: LOC119629706
subclass of: SO_0000673
so part of: LOC119629706
location: join(601313..601488,602651..603101)
location: region:601313-603101:1
so has part: feature:601313-601488:1:exon
so has part: feature:602651-603101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601313-601488:1:exon

position:601488:1
position: 601488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602651-603101:1:exon

position:602651:1
position: 602651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119629706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629706
translation: MYRRLLLSIIITTILIPIQSKTIQESNKTKWSAESSNFSPSYEVTEIIIDVPDDRPHVGPVTTNYIISKPLNHAVNNTELKTNKISVLQINAEYDDKNNENYSLIRGIKDYFHGIKNKVVKTVNNWLQQGTNGFGGL
SIO_010081: LOC119629706
subclass of: SO_0000673
so part of: LOC119629706
location: join(601462..601488,602651..603037)
location: region:601462-603037:1
so has part: feature:601462-601488:1:exon
so has part: feature:602651-603037:1:exon

XP_037872440.1
type: Protein
SIO_000068: ncbiprotein

position:601462:1
position: 601462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603037:1
position: 603037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601462-601488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602651-603037:1:exon

U23
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: U23
note: uncharacterized U23; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 618936..634881
location: region:618936-634881:1
so has part: feature:618936-634881:1:exon
subclass of: SO_0000010

100862793
type: Gene
SIO_000068: ncbigene

position:618936:1
position: 618936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634881:1
position: 634881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618936-634881:1:exon

U23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: U23
product: uncharacterized U23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_012692607.3
SIO_010081: U23
subclass of: SO_0000673
so part of: U23
location: join(618936..619063,626332..626382,629136..629281,632111..632630,634582..634881)
location: region:618936-634881:1
so has part: feature:618936-619063:1:exon
so has part: feature:626332-626382:1:exon
so has part: feature:629136-629281:1:exon
so has part: feature:632111-632630:1:exon
so has part: feature:634582-634881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618936-619063:1:exon

position:619063:1
position: 619063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626332-626382:1:exon

position:626332:1
position: 626332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626382:1
position: 626382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:629136-629281:1:exon

position:629136:1
position: 629136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629281:1
position: 629281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632111-632630:1:exon

position:632111:1
position: 632111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632630:1
position: 632630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:634582-634881:1:exon

position:634582:1
position: 634582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

U23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: U23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100862793 isoform X1
translation: MLCTVVLRRRSARSSENELKCRELYRVFVFKMINMMVPLIFLIINAATSVHAAKQQVQLSDSYLPVAMQIIAHLTDQMAFEVDDVTPSSISTTTTTKPPELTTRPHKPGFYAPSSPPSVTDRFNHYWQRFILLPLEQATQYTVIRPQEPKTEASLLSIHQEQVQPLVEPRPQHQNLLPPYEVKISSRSDGFVIDEDLTDDSLQYLTDDVKELIKIARNPGDDRVVDVWDGFRSGPEPISARAKLSSSNLRLLLLYDLLSRDAKRQRLSDFSGFSPEVMKALVESSNGGARAQLKMALSKMVERGDCGHEYANNRAKEMVTELEKDESKLSSELRYLQPLVYKY
SIO_010081: U23
subclass of: SO_0000673
so part of: U23
location: join(618968..619063,626332..626382,629136..629281,632111..632630,634582..634800)
location: region:618968-634800:1
so has part: feature:618968-619063:1:exon
so has part: feature:626332-626382:1:exon
so has part: feature:629136-629281:1:exon
so has part: feature:632111-632630:1:exon
so has part: feature:634582-634800:1:exon

XP_012548061.2
type: Protein
SIO_000068: ncbiprotein

position:618968:1
position: 618968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634800:1
position: 634800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618968-619063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626332-626382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629136-629281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632111-632630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634582-634800:1:exon

U23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: U23
product: uncharacterized U23
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001257019.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 24 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001257019.2
SIO_010081: U23
subclass of: SO_0000673
so part of: U23
location: join(618977..619063,626332..626382,629136..629353,632111..632630,634582..634881)
location: region:618977-634881:1
so has part: feature:618977-619063:1:exon
so has part: feature:626332-626382:1:exon
so has part: feature:629136-629353:1:exon
so has part: feature:632111-632630:1:exon
so has part: feature:634582-634881:1:exon

position:618977:1
position: 618977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618977-619063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626332-626382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629136-629353:1:exon

position:629353:1
position: 629353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632111-632630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634582-634881:1:exon

U23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: U23
inference: similar to AA sequence (same species):RefSeq:NP_001243948.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: uncharacterized protein LOC100862793 precursor
translation: MMVPLIFLIINAATSVHTAKQQIQLSDSYLPVAMQIIAHLTDQMAFEVDDVTPSSISTTTTTKPYVTTPKPGVKPTTNGWWSHLTTKRPELTTRPHKPGFYAPSSPPSVTDRFNHYWQRFILLPLEQATQYTVIRPQEPKTEASLLSIHQEQVQPLVEPRPQHQNLLPPYEVKISSRSDGFVIDEDLTDDSLQYLTDDVKELIKIARNPGDDRVVDVWDGFRSGPEPISARAKLSSSNLRLLLLYDLLSRDAKRQRLSDFSGFSPEVMKALVESSNGGARAQLKMALSKMVERGDCGHEYANNRAKEMVTELEKDESKLSSELRYLQPLVYKY
SIO_010081: U23
subclass of: SO_0000673
so part of: U23
location: join(626338..626382,629136..629353,632111..632630,634582..634800)
location: region:626338-634800:1
so has part: feature:626338-626382:1:exon
so has part: feature:629136-629353:1:exon
so has part: feature:632111-632630:1:exon
so has part: feature:634582-634800:1:exon

NP_001243948.1
type: Protein
SIO_000068: ncbiprotein

position:626338:1
position: 626338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626338-626382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629136-629353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632111-632630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634582-634800:1:exon

U23
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 7091
gene: U23
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: U23
subclass of: SO_0000673
so part of: U23
location: join(626338..626382,629136..629144)
location: region:626338-629144:1
so has part: feature:626338-626382:1:exon
so has part: feature:629136-629144:1:exon

position:629144:1
position: 629144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626338-626382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629136-629144:1:exon

LOC101741921
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(637442..657905)
location: region:637442-657905:-1
so has part: feature:637442-657905:-1:exon
subclass of: SO_0000010

101741921
type: Gene
SIO_000068: ncbigene

position:637442:-1
position: 637442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657905:-1
position: 657905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637442-657905:-1:exon

LOC101741921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741921
product: uncharacterized LOC101741921
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_004928951.3
SIO_010081: LOC101741921
subclass of: SO_0000673
so part of: LOC101741921
location: complement(join(637442..640205,641361..641515,657739..657905))
location: region:637442-657905:-1
so has part: feature:657739-657905:-1:exon
so has part: feature:641361-641515:-1:exon
so has part: feature:637442-640205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657739-657905:-1:exon

position:657739:-1
position: 657739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641361-641515:-1:exon

position:641361:-1
position: 641361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641515:-1
position: 641515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637442-640205:-1:exon

position:640205:-1
position: 640205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101741921
translation: MVNVKISILVLFVTLIFEPCCSRSAMDVEQSVVSVYTTQPSAPGAPLDVYHQLANNIAERITSPIYRFLGIGNRTQEKTTQKPWDNIEILDEPMKSVLKPLDNSITTERDVEELSADALKKIDRKPEKISLLPTYLPVPEKLNDTDIDELDDDDLFQFEDDDEVTKPREGPFIYILELAGSIIQLLWGGFLSLFRPSTKSS
SIO_010081: LOC101741921
subclass of: SO_0000673
so part of: LOC101741921
location: complement(join(639800..640205,641361..641515,657739..657783))
location: region:639800-657783:-1
so has part: feature:657739-657783:-1:exon
so has part: feature:641361-641515:-1:exon
so has part: feature:639800-640205:-1:exon

XP_004929008.1
type: Protein
SIO_000068: ncbiprotein

position:639800:-1
position: 639800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657783:-1
position: 657783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657739-657783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641361-641515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639800-640205:-1:exon

LOC101746858
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101746858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663922..665316
location: region:663922-665316:1
so has part: feature:663922-665316:1:exon
subclass of: SO_0000010

101746858
type: Gene
SIO_000068: ncbigene

position:663922:1
position: 663922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665316:1
position: 665316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663922-665316:1:exon

LOC101746858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101746858
product: uncharacterized LOC101746858
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004929059.4
SIO_010081: LOC101746858
subclass of: SO_0000673
so part of: LOC101746858
location: 663922..665316
location: region:663922-665316:1
so has part: feature:663922-665316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663922-665316:1:exon

LOC101746858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101746858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101746858
translation: MMSVSFTSKASYGGCRYDKTQKCCRLPRKIIASKQISKDASTKSKTCSESAVSTKSVIKPKKTAKSDSNFASNKCPTMPISICEKCGDSINPNSSSEENNKHNILYTLKSNRKYYQDEKISSIEQFYKNTNFEQSATSIRDERNHNKNYLGTISETPEFCITSNRDLEDSMVKFYSNDDKIFLDTDKPEIIEELKEFRNNNYFECHSSKSRIKNRGSATSLKDHECVYRFYLNERLYPEPLNADYKNTIRCVQCHLPMESRSDSKEKINGTLQAKVSLGGELNDVMLLLPAKEPLIIKERRREEKKPTEPIYFGVIKFGFGRNSNMKSAYESNSLALKYQKGYQEFAAKTCCRYKNIDDNDVLVL
SIO_010081: LOC101746858
subclass of: SO_0000673
so part of: LOC101746858
location: 664001..665098
location: region:664001-665098:1
so has part: feature:664001-665098:1:exon

XP_004929116.1
type: Protein
SIO_000068: ncbiprotein

position:664001:1
position: 664001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665098:1
position: 665098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664001-665098:1:exon

LOC101746720
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101746720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 670547..683385
location: region:670547-683385:1
so has part: feature:670547-683385:1:exon
subclass of: SO_0000010

101746720
type: Gene
SIO_000068: ncbigene

position:670547:1
position: 670547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683385:1
position: 683385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670547-683385:1:exon

LOC101746720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101746720
product: protein takeout
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_038016536.1
SIO_010081: LOC101746720
subclass of: SO_0000673
so part of: LOC101746720
location: join(670547..670730,680871..680963,681638..681785,682048..682181,682774..682939,683126..683385)
location: region:670547-683385:1
so has part: feature:670547-670730:1:exon
so has part: feature:680871-680963:1:exon
so has part: feature:681638-681785:1:exon
so has part: feature:682048-682181:1:exon
so has part: feature:682774-682939:1:exon
so has part: feature:683126-683385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670547-670730:1:exon

position:670730:1
position: 670730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680871-680963:1:exon

position:680871:1
position: 680871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680963:1
position: 680963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681638-681785:1:exon

position:681638:1
position: 681638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681785:1
position: 681785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682048-682181:1:exon

position:682048:1
position: 682048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682181:1
position: 682181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682774-682939:1:exon

position:682774:1
position: 682774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682939:1
position: 682939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683126-683385:1:exon

position:683126:1
position: 683126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101746720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101746720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein takeout
translation: MFFNAILLGALVYASADNALPQDFTRCRQKDPKLNDCLKSAVPDALKRMKQGISSLSVPQMEPLHVSGMNIDSGAGPVVITQNYKNIKIHGLTDSVLTTYKADLKHYRLKTDSITPKMEFIADYVMNGRILVLPIQGKGIANITMVNLVVKHDLIGEPILRDGSVYMHIRDYKVKFIPKKVVLHFTNLFNGDKRLGDQMNLFLNQNSELVFNELKDSYEKALSSVFQDVTNKIFDKVPMKDIFLED
SIO_010081: LOC101746720
subclass of: SO_0000673
so part of: LOC101746720
location: join(670670..670730,680871..680963,681638..681785,682048..682181,682774..682939,683126..683264)
location: region:670670-683264:1
so has part: feature:670670-670730:1:exon
so has part: feature:680871-680963:1:exon
so has part: feature:681638-681785:1:exon
so has part: feature:682048-682181:1:exon
so has part: feature:682774-682939:1:exon
so has part: feature:683126-683264:1:exon

XP_037872464.1
type: Protein
SIO_000068: ncbiprotein

position:670670:1
position: 670670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683264:1
position: 683264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670670-670730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680871-680963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681638-681785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682048-682181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682774-682939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683126-683264:1:exon

LOC101741818
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683373..688675)
location: region:683373-688675:-1
so has part: feature:683373-688675:-1:exon
subclass of: SO_0000011

101741818
type: Gene
SIO_000068: ncbigene

position:683373:-1
position: 683373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688675:-1
position: 688675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683373-688675:-1:exon

LOC101741818
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC101741818
product: uncharacterized LOC101741818
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_001139854.2
SIO_010081: LOC101741818
subclass of: SO_0000673
so part of: LOC101741818
location: complement(join(683373..683636,683848..683914,684883..684991,688655..688675))
location: region:683373-688675:-1
so has part: feature:688655-688675:-1:exon
so has part: feature:684883-684991:-1:exon
so has part: feature:683848-683914:-1:exon
so has part: feature:683373-683636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688655-688675:-1:exon

position:688655:-1
position: 688655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684883-684991:-1:exon

position:684883:-1
position: 684883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684991:-1
position: 684991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:683848-683914:-1:exon

position:683848:-1
position: 683848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683914:-1
position: 683914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683373-683636:-1:exon

position:683636:-1
position: 683636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741675
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(689593..763309)
location: region:689593-763309:-1
so has part: feature:689593-763309:-1:exon
subclass of: SO_0000010

101741675
type: Gene
SIO_000068: ncbigene

position:689593:-1
position: 689593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763309:-1
position: 763309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689593-763309:-1:exon

LOC101741675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741675
product: GAS2-like protein pickled eggs
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038016552.1
SIO_010081: LOC101741675
subclass of: SO_0000673
so part of: LOC101741675
location: complement(join(689593..692639,701940..702582,705338..705904,748674..748893,763136..763309))
location: region:689593-763309:-1
so has part: feature:763136-763309:-1:exon
so has part: feature:748674-748893:-1:exon
so has part: feature:705338-705904:-1:exon
so has part: feature:701940-702582:-1:exon
so has part: feature:689593-692639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763136-763309:-1:exon

position:763136:-1
position: 763136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748674-748893:-1:exon

position:748674:-1
position: 748674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748893:-1
position: 748893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705338-705904:-1:exon

position:705338:-1
position: 705338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705904:-1
position: 705904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701940-702582:-1:exon

position:701940:-1
position: 701940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702582:-1
position: 702582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689593-692639:-1:exon

position:692639:-1
position: 692639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GAS2-like protein pickled eggs
translation: MASAGAVLLEARPFRPFKSSEEYLYAMKEDLAEWLTVLYPELRITADNFLDRLDTGVALCRHANAVRDSAKLILDAPQPEAEDAIILAKALRSRPPVNMLPAAKAGTFFARDNLSNFIDWCRKALGILECLLFETDDLCLRKNEKHVVLCLLEVARKGAVLGMPAPLLVQMEKQIERELAGEELRPDDSALGLTVPTGPQPQLVTNDLRSLDERVRDLVERCSCPTQFPMVRVSEGKYRIGDTRMLIFVRILRSHVMVRVGGGWDTLAHYLDKHDPCRCKAQHRTSLSARLARPKHDLVGATVTYERPDPGPTSLPYSKEKNDRYEPTSLQYHEERHYTSTNRLNEPTSLPYLETERSHSPSRKLLAPRSISPGRKSSSPDRRTKIVPSNHLVPTPLGLRNKSPRPVSPAPAAESASDNGSEVSDEGYRSLGVVAGSTQGSPSTKALNRYSLHSQNSIEDAEFNERLDQDDGCHMDKGDRDDYVSISTGLRKTDFSDTFYGSRKTSSVDEKSIRGSPEKIVVVENNDAPSKSLRPSRGASESPTKTIRSRQASRIPHSPVRTRTPSRGNTPSPKHTAKTAQTSPKLTPKLPPTARNTWGGRTAPTQSKAKSRPAIGADTFENPNRSPKPTPRASPDAFKRNSPLRASSATLRSPPNQKPLSPLLEQILRSAETAKDDASVLEKMKEIIRTYSKGDDSLSRTSSKDSDYADFTSAWVMSDGKLERSMSTRQLSSPRKDQRNGASRIPAPVSIGCRRSTSTSQFQ
SIO_010081: LOC101741675
subclass of: SO_0000673
so part of: LOC101741675
location: complement(join(691741..692639,701940..702582,705338..705904,748674..748856))
location: region:691741-748856:-1
so has part: feature:748674-748856:-1:exon
so has part: feature:705338-705904:-1:exon
so has part: feature:701940-702582:-1:exon
so has part: feature:691741-692639:-1:exon

XP_037872480.1
type: Protein
SIO_000068: ncbiprotein

position:691741:-1
position: 691741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748856:-1
position: 748856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748674-748856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705338-705904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701940-702582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691741-692639:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(714831..714902)
location: region:714831-714902:-1
so has part: feature:714831-714902:-1:exon
subclass of: SO_0000663

110385695
type: Gene
SIO_000068: ncbigene

position:714831:-1
position: 714831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714902:-1
position: 714902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714831-714902:-1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7091
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(714867..714869),aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: complement(714831..714902)
location: region:714831-714902:-1
so has part: feature:714831-714902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714831-714902:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 847399..847471
location: region:847399-847471:1
so has part: feature:847399-847471:1:exon
subclass of: SO_0000663

110385693
type: Gene
SIO_000068: ncbigene

position:847399:1
position: 847399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847471:1
position: 847471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847399-847471:1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7091
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:847432..847434,aa:Arg,seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: 847399..847471
location: region:847399-847471:1
so has part: feature:847399-847471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:847399-847471:1:exon

LOC101741536
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(856389..867092)
location: region:856389-867092:-1
so has part: feature:856389-867092:-1:exon
subclass of: SO_0000010

101741536
type: Gene
SIO_000068: ncbigene

position:856389:-1
position: 856389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867092:-1
position: 867092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856389-867092:-1:exon

LOC101741536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741536
product: required for meiotic nuclear division protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_004928949.2
SIO_010081: LOC101741536
subclass of: SO_0000673
so part of: LOC101741536
location: complement(join(856389..857111,860403..860551,861105..861260,862464..862590,863595..863672,865181..865258,865794..865949,866556..867092))
location: region:856389-867092:-1
so has part: feature:866556-867092:-1:exon
so has part: feature:865794-865949:-1:exon
so has part: feature:865181-865258:-1:exon
so has part: feature:863595-863672:-1:exon
so has part: feature:862464-862590:-1:exon
so has part: feature:861105-861260:-1:exon
so has part: feature:860403-860551:-1:exon
so has part: feature:856389-857111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866556-867092:-1:exon

position:866556:-1
position: 866556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865794-865949:-1:exon

position:865794:-1
position: 865794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865949:-1
position: 865949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865181-865258:-1:exon

position:865181:-1
position: 865181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865258:-1
position: 865258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863595-863672:-1:exon

position:863595:-1
position: 863595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863672:-1
position: 863672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:862464-862590:-1:exon

position:862464:-1
position: 862464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862590:-1
position: 862590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861105-861260:-1:exon

position:861105:-1
position: 861105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861260:-1
position: 861260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:860403-860551:-1:exon

position:860403:-1
position: 860403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860551:-1
position: 860551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856389-857111:-1:exon

position:857111:-1
position: 857111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: required for meiotic nuclear division protein 1 homolog
translation: MSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATANSYDLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSEQREIFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFIMVPERDNSLERFAFSHAMAQSARLGAWEARLEWLAAAVRYHTASMEREGAAHVDKKEVVRKLGELFSLRHRLNVESDMLDTPDFYWEEEQLERLYSNTLAYFTIPRRTRVLNERLSHCVELLELLSSWAADRHHIRLEWMIIVLILAEVCFELLHIFERNSFRLDRRRPSPERRPLFSSDLEESIVQEISIIDT
SIO_010081: LOC101741536
subclass of: SO_0000673
so part of: LOC101741536
location: complement(join(857003..857111,860403..860551,861105..861260,862464..862590,863595..863672,865181..865258,865794..865949,866556..866914))
location: region:857003-866914:-1
so has part: feature:866556-866914:-1:exon
so has part: feature:865794-865949:-1:exon
so has part: feature:865181-865258:-1:exon
so has part: feature:863595-863672:-1:exon
so has part: feature:862464-862590:-1:exon
so has part: feature:861105-861260:-1:exon
so has part: feature:860403-860551:-1:exon
so has part: feature:857003-857111:-1:exon

XP_004929006.1
type: Protein
SIO_000068: ncbiprotein

position:857003:-1
position: 857003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866914:-1
position: 866914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866556-866914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865794-865949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865181-865258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863595-863672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862464-862590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861105-861260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860403-860551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857003-857111:-1:exon

LOC101741395
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(869230..883182)
location: region:869230-883182:-1
so has part: feature:869230-883182:-1:exon
subclass of: SO_0000010

101741395
type: Gene
SIO_000068: ncbigene

position:869230:-1
position: 869230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883182:-1
position: 883182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869230-883182:-1:exon

LOC101741395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741395
product: crossover junction endonuclease EME1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_004928948.3
SIO_010081: LOC101741395
subclass of: SO_0000673
so part of: LOC101741395
location: complement(join(869230..869435,869636..869748,870656..870738,871457..871562,878920..878993,880048..880220,881274..881447,882208..882341,882992..883182))
location: region:869230-883182:-1
so has part: feature:882992-883182:-1:exon
so has part: feature:882208-882341:-1:exon
so has part: feature:881274-881447:-1:exon
so has part: feature:880048-880220:-1:exon
so has part: feature:878920-878993:-1:exon
so has part: feature:871457-871562:-1:exon
so has part: feature:870656-870738:-1:exon
so has part: feature:869636-869748:-1:exon
so has part: feature:869230-869435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882992-883182:-1:exon

position:882992:-1
position: 882992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882208-882341:-1:exon

position:882208:-1
position: 882208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882341:-1
position: 882341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881274-881447:-1:exon

position:881274:-1
position: 881274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881447:-1
position: 881447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:880048-880220:-1:exon

position:880048:-1
position: 880048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880220:-1
position: 880220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:878920-878993:-1:exon

position:878920:-1
position: 878920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878993:-1
position: 878993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:871457-871562:-1:exon

position:871457:-1
position: 871457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871562:-1
position: 871562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:870656-870738:-1:exon

position:870656:-1
position: 870656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870738:-1
position: 870738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:869636-869748:-1:exon

position:869636:-1
position: 869636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869748:-1
position: 869748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:869230-869435:-1:exon

position:869435:-1
position: 869435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease EME1
translation: MNKIYKPGECMKYMYVEIHPVLAEAWYMADVSREVTSASAHLITTSSICDPALVMWSRQVPQTLINDDGLAKLSPQSERASLALYVCTAEEAARHVRAGSLGAHVRRVRDLAGAALTLVVFGVNDYFKSCGRKTMNSSRKLIGELDLELAITDLLVTTDCDTVLVNSSSELALLIVQHTKAIAEAPYKMSKRAYDEQSELYLRGENRKCVTVDKQGNGVSRLWQQMIAVLPHSSLETSRALCAKYPTPLDLYESLNSPDSVNELANIGVSRTAVPGSKARRIGPEFARKLHTLFTVTDGDILLD
SIO_010081: LOC101741395
subclass of: SO_0000673
so part of: LOC101741395
location: complement(join(869280..869435,869636..869748,870656..870738,871457..871562,878920..878993,880048..880220,881274..881447,882208..882243))
location: region:869280-882243:-1
so has part: feature:882208-882243:-1:exon
so has part: feature:881274-881447:-1:exon
so has part: feature:880048-880220:-1:exon
so has part: feature:878920-878993:-1:exon
so has part: feature:871457-871562:-1:exon
so has part: feature:870656-870738:-1:exon
so has part: feature:869636-869748:-1:exon
so has part: feature:869280-869435:-1:exon

XP_004929005.1
type: Protein
SIO_000068: ncbiprotein

position:869280:-1
position: 869280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882243:-1
position: 882243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882208-882243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881274-881447:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880048-880220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878920-878993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871457-871562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870656-870738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869636-869748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869280-869435:-1:exon

LOC101746437
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101746437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 887523..930627
location: region:887523-930627:1
so has part: feature:887523-930627:1:exon
subclass of: SO_0000010

101746437
type: Gene
SIO_000068: ncbigene

position:887523:1
position: 887523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930627:1
position: 930627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887523-930627:1:exon

LOC101746437
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101746437
product: nucleoredoxin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_004929056.4
SIO_010081: LOC101746437
subclass of: SO_0000673
so part of: LOC101746437
location: join(887523..888240,907277..907510,908098..908207,926966..927170,929123..929213,930162..930627)
location: region:887523-930627:1
so has part: feature:887523-888240:1:exon
so has part: feature:907277-907510:1:exon
so has part: feature:908098-908207:1:exon
so has part: feature:926966-927170:1:exon
so has part: feature:929123-929213:1:exon
so has part: feature:930162-930627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887523-888240:1:exon

position:888240:1
position: 888240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907277-907510:1:exon

position:907277:1
position: 907277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907510:1
position: 907510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:908098-908207:1:exon

position:908098:1
position: 908098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908207:1
position: 908207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:926966-927170:1:exon

position:926966:1
position: 926966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927170:1
position: 927170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:929123-929213:1:exon

position:929123:1
position: 929123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929213:1
position: 929213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:930162-930627:1:exon

position:930162:1
position: 930162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101746437
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101746437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoredoxin
translation: MDWREKLFGKVLVKCESVSQGGQYDNVPTVEALNDCVEAGEGAVCGIYFSFANISDNSDDFGLRLEEIHRRVHPRLQVVQVVLWAHVGTPEGPVEREAGFYKSLMGKPWFAVPYHDVDIKRRLTQKYSIAVGVPTLVIRGRPVRDALLEDPLGERFPWPAPPLTEVLRGIQLQGEGETKLYEDLPGDALRVFYFAAHWCPPCRTFAPSLCAALSAVRKRRAKYANTQLIIVSSDRSEQSYNRTVQSVAAANALAVPWSAAEARGALPTALGVAGIPALVIANGDGTVLTTNGRQKLAADPTGLNFPWSQRPLSVLTEQALLKMARHPAIVLFVDDEDSEIEFAESVLTPAAESYYEECSIQYPGFCPHQSSSDDETLDFDYPPRKSKKRPFKHVMFYVGVDGTDTADMLREHICLDDAVPLLTAIDFPKQRMFTMKYGDEITTHSVQNFLDAYLSGNADFKPLKPYSDKC
SIO_010081: LOC101746437
subclass of: SO_0000673
so part of: LOC101746437
location: join(887881..888240,907277..907510,908098..908207,926966..927170,929123..929213,930162..930574)
location: region:887881-930574:1
so has part: feature:887881-888240:1:exon
so has part: feature:907277-907510:1:exon
so has part: feature:908098-908207:1:exon
so has part: feature:926966-927170:1:exon
so has part: feature:929123-929213:1:exon
so has part: feature:930162-930574:1:exon

XP_004929113.2
type: Protein
SIO_000068: ncbiprotein

position:887881:1
position: 887881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930574:1
position: 930574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887881-888240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907277-907510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:908098-908207:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926966-927170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929123-929213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930162-930574:1:exon

LOC101741115
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 937773..939327
location: region:937773-939327:1
so has part: feature:937773-939327:1:exon
subclass of: SO_0000010

101741115
type: Gene
SIO_000068: ncbigene

position:937773:1
position: 937773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939327:1
position: 939327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937773-939327:1:exon

LOC101741115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741115
product: ATP-dependent RNA helicase WM6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004928946.3
SIO_010081: LOC101741115
subclass of: SO_0000673
so part of: LOC101741115
location: 937773..939327
location: region:937773-939327:1
so has part: feature:937773-939327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937773-939327:1:exon

LOC101741115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase WM6
translation: MADNDDLLDYEDEEQADQQTADGSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNSKKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIELSTYIEGR
SIO_010081: LOC101741115
subclass of: SO_0000673
so part of: LOC101741115
location: 937900..939177
location: region:937900-939177:1
so has part: feature:937900-939177:1:exon

XP_004929003.2
type: Protein
SIO_000068: ncbiprotein

position:937900:1
position: 937900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939177:1
position: 939177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937900-939177:1:exon

LOC101740973
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940633..942636)
location: region:940633-942636:-1
so has part: feature:940633-942636:-1:exon
subclass of: SO_0000010

101740973
type: Gene
SIO_000068: ncbigene

position:940633:-1
position: 940633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942636:-1
position: 942636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940633-942636:-1:exon

LOC101740973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740973
product: venom serine carboxypeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004928945.4
SIO_010081: LOC101740973
subclass of: SO_0000673
so part of: LOC101740973
location: complement(940633..942636)
location: region:940633-942636:-1
so has part: feature:940633-942636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940633-942636:-1:exon

LOC101740973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: venom serine carboxypeptidase
translation: MYQVLLLITILSEARAFLHHYPKLNLGERDGGDPGEPLFLTPYVESGNITTGRRLARVPFTESLRIKSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPIIVWLQGGPGATSLYGLFTENGPLRVRNKKFERRKYNWALSHHIIYIDNPVGTGFSFTKDPKGYCVDETQVGEQLYSTLIQFFQLFPELQTNNFFVTGESYGGKYVPALAYTIHKKNPTAQIKINMKGIAIGNGLSDPVHQLVYGKYLYQIGLIDWNQAKVFEQYENKTKDFIKQGEWDKAFETFDTLLNGDMLNGSSVFKNMTGFDFYFNYLHTKDYTQFEDFGPMLQRSAVRKAIHVGNLPFNNGTEVEKHLKQDVMKSVAPWIAELLDNYYIVIYNGQLDIIVAYPLTVNYLRNLNFTGSDEYKTAKRYIWKVDGEVAGYVKQAGKLVEILVRNAGHMVPGDQPKWALDLITRFTHEKTYFDKAEIGQTLGSL
SIO_010081: LOC101740973
subclass of: SO_0000673
so part of: LOC101740973
location: complement(940776..942203)
location: region:940776-942203:-1
so has part: feature:940776-942203:-1:exon

XP_004929002.1
type: Protein
SIO_000068: ncbiprotein

position:940776:-1
position: 940776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942203:-1
position: 942203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940776-942203:-1:exon

LOC101740827
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 947278..949084
location: region:947278-949084:1
so has part: feature:947278-949084:1:exon
subclass of: SO_0000010

101740827
type: Gene
SIO_000068: ncbigene

position:947278:1
position: 947278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949084:1
position: 949084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947278-949084:1:exon

LOC101740827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740827
product: vitellogenic carboxypeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004928944.4
SIO_010081: LOC101740827
subclass of: SO_0000673
so part of: LOC101740827
location: 947278..949084
location: region:947278-949084:1
so has part: feature:947278-949084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947278-949084:1:exon

LOC101740827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitellogenic carboxypeptidase
translation: MMAVKWKPLLSAVPCVLFFSTLFPLNGAKFPNVYPRVKLDARPNDSAGDPLMLTPFLKNESIALAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLIASKDGFAKREYHWAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAMDQFFTLFPNLRANDFYIAGESYAGKYIPAFGLYVHNLNQESKRINLKGMAIGNGYCDPLHQLDYGDYLYQHGLIDDNQLKTFLKYQLEISTRIKKGEYSTAAYLLDELFDGEMTKNSMFKTYTGFENSYNFLISKEEDDMTIYADLLKDDTVRRGVHVGGLAFNDGLQVLTSLVDDLTRSVAPLLAKLLSHYPIMFYSGQLDIIVAYPLTEKFLANLNFSAVVEYKFAPRNIWRVDGDVAGYVRKAGNLTEVLVRNAGHMVPRDQPKWAFELITQFISKIL
SIO_010081: LOC101740827
subclass of: SO_0000673
so part of: LOC101740827
location: 947596..949011
location: region:947596-949011:1
so has part: feature:947596-949011:1:exon

XP_004929001.1
type: Protein
SIO_000068: ncbiprotein

position:947596:1
position: 947596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949011:1
position: 949011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947596-949011:1:exon

LOC101746151
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101746151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(952855..973319)
location: region:952855-973319:-1
so has part: feature:952855-973319:-1:exon
subclass of: SO_0000010

101746151
type: Gene
SIO_000068: ncbigene

position:952855:-1
position: 952855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973319:-1
position: 973319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952855-973319:-1:exon

LOC101746151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101746151
product: cell division control protein 45 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_004929055.4
SIO_010081: LOC101746151
subclass of: SO_0000673
so part of: LOC101746151
location: complement(join(952855..953803,955970..956133,956501..956689,957942..958143,967833..967990,971629..971805,971962..972096,972236..972310,972768..973058,973134..973319))
location: region:952855-973319:-1
so has part: feature:973134-973319:-1:exon
so has part: feature:972768-973058:-1:exon
so has part: feature:972236-972310:-1:exon
so has part: feature:971962-972096:-1:exon
so has part: feature:971629-971805:-1:exon
so has part: feature:967833-967990:-1:exon
so has part: feature:957942-958143:-1:exon
so has part: feature:956501-956689:-1:exon
so has part: feature:955970-956133:-1:exon
so has part: feature:952855-953803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973134-973319:-1:exon

position:973134:-1
position: 973134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972768-973058:-1:exon

position:972768:-1
position: 972768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973058:-1
position: 973058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972236-972310:-1:exon

position:972236:-1
position: 972236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972310:-1
position: 972310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971962-972096:-1:exon

position:971962:-1
position: 971962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972096:-1
position: 972096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:971629-971805:-1:exon

position:971629:-1
position: 971629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971805:-1
position: 971805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:967833-967990:-1:exon

position:967833:-1
position: 967833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967990:-1
position: 967990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:957942-958143:-1:exon

position:957942:-1
position: 957942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958143:-1
position: 958143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956501-956689:-1:exon

position:956501:-1
position: 956501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956689:-1
position: 956689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:955970-956133:-1:exon

position:955970:-1
position: 955970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956133:-1
position: 956133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:952855-953803:-1:exon

position:953803:-1
position: 953803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101746151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101746151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division control protein 45 homolog
translation: MFIEDLRNDFYNLLLGNRVLLLVHYDVDAICTCKILQGLFKSDNISYTLVPVGGISELKTAYEENNEEVKYVVLVNCGGTIDLVDILQPEEDVVFFVLDSHKPTDVCNVYSDGQVRLVYRDEEENIPNFDDIFRDDDDENEEEMPSGREDLEAFVERRRQRREWETKRNDLMFNYTQFSYYGKPSACIAVELAWLLCRSGVEYTWAGCIAVSAYAATHTRSPAQALLDAHALHRHLAAQLPSHGASVSMEKDAFLPLYRTWSLENALKYSPVVAPHLRLHSLAGADRLRQLLADMGIPLQQARQAYRSMDVELRRSLLDALDAAADKHHLPRLTHATYLLRRDHCAPLAALDCVYCVMALLELEGPGGFQLALASVDTSSAECEARQRGLGAARRGLAAAAALAGATLAARALHHAGPFAHFTISEGAAECEWGPWWLAVCARWVGAGAGRGAAAVLVAAPRGRTVLLCGVPPPQRTDTRNLFGAAFEQAAAKCGASVSLDHFDSAVVTLPAAQRPQFLDALTALLA
SIO_010081: LOC101746151
subclass of: SO_0000673
so part of: LOC101746151
location: complement(join(953662..953803,955970..956133,956501..956689,957942..958143,967833..967990,971629..971805,971962..972096,972236..972310,972768..973058,973134..973184))
location: region:953662-973184:-1
so has part: feature:973134-973184:-1:exon
so has part: feature:972768-973058:-1:exon
so has part: feature:972236-972310:-1:exon
so has part: feature:971962-972096:-1:exon
so has part: feature:971629-971805:-1:exon
so has part: feature:967833-967990:-1:exon
so has part: feature:957942-958143:-1:exon
so has part: feature:956501-956689:-1:exon
so has part: feature:955970-956133:-1:exon
so has part: feature:953662-953803:-1:exon

XP_004929112.1
type: Protein
SIO_000068: ncbiprotein

position:953662:-1
position: 953662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973184:-1
position: 973184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973134-973184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972768-973058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972236-972310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971962-972096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971629-971805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967833-967990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957942-958143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956501-956689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:955970-956133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953662-953803:-1:exon

LOC101743714
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 961885..963729
location: region:961885-963729:1
so has part: feature:961885-963729:1:exon
subclass of: SO_0000010

101743714
type: Gene
SIO_000068: ncbigene

position:961885:1
position: 961885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963729:1
position: 963729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961885-963729:1:exon

LOC101743714
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743714
product: uncharacterized LOC101743714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_038016270.1
SIO_010081: LOC101743714
subclass of: SO_0000673
so part of: LOC101743714
location: join(961885..962420,962521..962653,962779..962961,963033..963090,963249..963729)
location: region:961885-963729:1
so has part: feature:961885-962420:1:exon
so has part: feature:962521-962653:1:exon
so has part: feature:962779-962961:1:exon
so has part: feature:963033-963090:1:exon
so has part: feature:963249-963729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961885-962420:1:exon

position:962420:1
position: 962420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962521-962653:1:exon

position:962521:1
position: 962521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962653:1
position: 962653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962779-962961:1:exon

position:962779:1
position: 962779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962961:1
position: 962961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963033-963090:1:exon

position:963033:1
position: 963033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963090:1
position: 963090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963249-963729:1:exon

position:963249:1
position: 963249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743714
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743714
translation: MRTSHSQYLTMVEFMEANGDLSKPSGGPRGRNFIQMKWKELTGLLNSDSSGDPKSEDKWRKVWSDYKNNCKKKCAKINRAASGTGGGPALHLLLTDQEQRVMQIIGVQAATGMEIKEAGFPQEEISTERPNTQIILKEPEIDWNTPSTSSQPTVAPPPPTEAPPPVIDEEEEWNPPPQKKRKNNLTKMFLDIDRKAREYASERDRVYEELERDRLRVREFEVRERVRQRDEELRMQGQWLEFMKEAMEAFVRFMERKS
SIO_010081: LOC101743714
subclass of: SO_0000673
so part of: LOC101743714
location: join(962371..962420,962521..962653,962779..962961,963033..963090,963249..963601)
location: region:962371-963601:1
so has part: feature:962371-962420:1:exon
so has part: feature:962521-962653:1:exon
so has part: feature:962779-962961:1:exon
so has part: feature:963033-963090:1:exon
so has part: feature:963249-963601:1:exon

XP_037872198.1
type: Protein
SIO_000068: ncbiprotein

position:962371:1
position: 962371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963601:1
position: 963601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962371-962420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962521-962653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962779-962961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963033-963090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963249-963601:1:exon

LOC105843012
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC105843012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(963603..966081)
location: region:963603-966081:-1
so has part: feature:963603-966081:-1:exon
subclass of: SO_0000010

105843012
type: Gene
SIO_000068: ncbigene

position:963603:-1
position: 963603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966081:-1
position: 966081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963603-966081:-1:exon

LOC105843012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105843012
product: putative nuclease HARBI1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_038016269.1
SIO_010081: LOC105843012
subclass of: SO_0000673
so part of: LOC105843012
location: complement(join(963603..964130,964211..964352,964433..964568,964935..965125,965293..965464,965553..966069))
location: region:963603-966069:-1
so has part: feature:965553-966069:-1:exon
so has part: feature:965293-965464:-1:exon
so has part: feature:964935-965125:-1:exon
so has part: feature:964433-964568:-1:exon
so has part: feature:964211-964352:-1:exon
so has part: feature:963603-964130:-1:exon

position:966069:-1
position: 966069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965553-966069:-1:exon

position:965553:-1
position: 965553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:965293-965464:-1:exon

position:965293:-1
position: 965293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965464:-1
position: 965464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964935-965125:-1:exon

position:964935:-1
position: 964935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965125:-1
position: 965125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964433-964568:-1:exon

position:964433:-1
position: 964433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964568:-1
position: 964568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:964211-964352:-1:exon

position:964211:-1
position: 964211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964352:-1
position: 964352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:963603-964130:-1:exon

position:964130:-1
position: 964130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105843012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105843012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative nuclease HARBI1
translation: MQRPPLYERSPLYYFVAASLLENEEYSSREVREITRRVALRKKNNPVDINDAEFKNRYRLNKESFKFLCNQLKQKTSLKASSRISLELKVLCALSFYATGSYQRLVGMAKYLGQTTVSKCVKEVTDALVTPAILNTFIKFPYARADRDVIRNKFFAKYGFPGVIGCIDGCHFHIFTPKKEVEHLYYSRKHFHSLNVQMICDSDCRILNVNAKYGGATHDAFIWENSVVNNYMQSLHRNNEQVWLLGDSGYPQRPWLMTPILDAVEGTPAYKYTAVHGRTRVAIENTFGRLKNRWRCLCKDRTLHYAPVKCAKIITACCVLHNLAIEFNIPEPEPAEIENPNLTMTISEHIFQENTTGDGLIRGRAIRSILVDKINRLHT
SIO_010081: LOC105843012
subclass of: SO_0000673
so part of: LOC105843012
location: complement(join(963727..964130,964211..964352,964433..964568,964935..965125,965293..965464,965553..965647))
location: region:963727-965647:-1
so has part: feature:965553-965647:-1:exon
so has part: feature:965293-965464:-1:exon
so has part: feature:964935-965125:-1:exon
so has part: feature:964433-964568:-1:exon
so has part: feature:964211-964352:-1:exon
so has part: feature:963727-964130:-1:exon

XP_037872197.1
type: Protein
SIO_000068: ncbiprotein

position:963727:-1
position: 963727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965647:-1
position: 965647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965553-965647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965293-965464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964935-965125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964433-964568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964211-964352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963727-964130:-1:exon

LOC105843012
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC105843012
product: putative nuclease HARBI1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XR_005245604.1
SIO_010081: LOC105843012
so part of: LOC105843012
location: complement(join(963989..964130,964211..964352,964935..965125,965293..965464,965553..966081))
location: region:963989-966081:-1
so has part: feature:965553-966081:-1:exon
so has part: feature:965293-965464:-1:exon
so has part: feature:964935-965125:-1:exon
so has part: feature:964211-964352:-1:exon
so has part: feature:963989-964130:-1:exon

position:963989:-1
position: 963989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965553-966081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965293-965464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964935-965125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964211-964352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963989-964130:-1:exon

LOC101746011
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101746011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(974053..978190)
location: region:974053-978190:-1
so has part: feature:974053-978190:-1:exon
subclass of: SO_0000010

101746011
type: Gene
SIO_000068: ncbigene

position:974053:-1
position: 974053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978190:-1
position: 978190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974053-978190:-1:exon

LOC101746011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101746011
product: RNA polymerase II-associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038016268.1
SIO_010081: LOC101746011
subclass of: SO_0000673
so part of: LOC101746011
location: complement(974053..978190)
location: region:974053-978190:-1
so has part: feature:974053-978190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974053-978190:-1:exon

LOC101746011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101746011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II-associated protein 1
translation: MLRRPTPGENEEDILKMQEEFLRKKRQNQNLQPAAQVVNLRTEPIKRPNTNEQEIRKPSKYAQSKGLKNHSEKRSKSNDTVGNSVITDVYEKNTEKPVEKKLDGEDDKVYYPTILPFVLGDIVEKNLDTVVEFDYKPMPPEGFPVVRKQNKDSKATKYIYQKNLNKIKKNIVDKMDVDEPSCSNNKQNTINLPDRSYILTSENSDDIHNENIKILSKMSEKEILEEQQKLFSNLDPKVVDFIKSRRMQNENSTRQTLKLNERDDINKLATVNQNVEMDTSTQEIENDTLWENDVLSHPEIQNWLHFDSLEKDKLQWMEGLDESKNIKPDEPYEARFDFKGYLLPYTMEYTDMTKTLYHHGEEPHRPGYTITELIELTRSTITQQRVMALNTIAGILQYHSAGTYKDIIEIPLSKLFFIIRIAMDENKVIILEPALKAMRNLVYNKLDEASLDALIGFEEGNLQPCFENDKSEIEELESKEAELKDFHLAEIDLIAALLRTDILQRIYYILESIKPSFNCVQYCLQILTRLGRDSVETAKRICEMEHLMNSIITNFVPVTGVNFVFKPQVVYNGKPVLAAIKLLRVLSLQTEEICNILLMKYNILAPISVYLSSAVDRSYGLRIQTESYCILSNLLYFGLSYDSAISLCPVILTALYKHVQGTDINVEASVLAATHAAVVLQLINNILKHNLNDFLTFKTEVYKLLKEGLLKWFGQLSQMEHYTCAHLRILCSALDCCYTVIEIEQLPVKFVSDALKQLSYSKGFQNVINNLSSCSNLLSKIENKDLYSVKNLISLKCTVIDSAQKVLPILKVASPIPLLMSLFKLLTIVNQKEISRIFLDHVWNYLQRLSKCVPSLSDNWFTRMETNFVFYVMKLSVMCNVDESKKDVMYAVANKLCYTLRVDKKYELDFLFESIVFNKDWFTAERLLNLVNLTDADGFSRALTAIEDIRQCYRRVINLNYKDTGANVVLRKWMEPILPRDWIYLPILMLYSKNQEAESIPHVSGDHAQKMSAQIATEKEFIITCSLEWILFNELCFSDLVNDIDVTDRFCRIMCVFLCDNSLFLQPKIRMLLQKCTNVLFKKKSAFNFDKQLTGLNNFQDFYTQFLEQFQAVSYGDDVFSACVLVPLAQKHNVKWRKLIWSEYAGCLRALDCPEQLLCYEVNEYLYPEETDESLIKSYHRALSCNLLRPDTIMHKIASHHVHIFKNRSQIQNT
SIO_010081: LOC101746011
subclass of: SO_0000673
so part of: LOC101746011
location: complement(974340..977984)
location: region:974340-977984:-1
so has part: feature:974340-977984:-1:exon

XP_037872196.1
type: Protein
SIO_000068: ncbiprotein

position:974340:-1
position: 974340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977984:-1
position: 977984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974340-977984:-1:exon

LOC101740686
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740686
note: translation machinery-associated protein 16 homolog; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 980525..982335
location: region:980525-982335:1
so has part: feature:980525-982335:1:exon
subclass of: SO_0000010

101740686
type: Gene
SIO_000068: ncbigene

position:980525:1
position: 980525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982335:1
position: 982335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980525-982335:1:exon

LOC101740686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740686
product: translation machinery-associated protein 16 homolog
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001098325.2
SIO_010081: LOC101740686
subclass of: SO_0000673
so part of: LOC101740686
location: 980525..982335
location: region:980525-982335:1
so has part: feature:980525-982335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:980525-982335:1:exon

LOC101740686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740686
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: uncharacterized protein LOC778500
translation: MGNLKKNLEKLKHPNSRKTMTLAKKLKKSEKKDQSKLGTHIKQNLIGEKIMWFKERIPEECEVFDKEQTLKLIESYLSRFDEELEQIALKNSIGQRKNRQHASREDVINMTRKKEQDEFETCGIEIPDLMDPQQMNVLRNWNGELRFLQHFKLKRFTKKILM
SIO_010081: LOC101740686
subclass of: SO_0000673
so part of: LOC101740686
location: 980649..981137
location: region:980649-981137:1
so has part: feature:980649-981137:1:exon

NP_001091795.2
type: Protein
SIO_000068: ncbiprotein

position:980649:1
position: 980649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981137:1
position: 981137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980649-981137:1:exon

LOC101740549
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(985588..999130)
location: region:985588-999130:-1
so has part: feature:985588-999130:-1:exon
subclass of: SO_0000010

101740549
type: Gene
SIO_000068: ncbigene

position:985588:-1
position: 985588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999130:-1
position: 999130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985588-999130:-1:exon

LOC101740549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740549
product: transmembrane protein 134, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_012692760.3
SIO_010081: LOC101740549
subclass of: SO_0000673
so part of: LOC101740549
location: complement(join(985588..991502,992652..992990,998801..999130))
location: region:985588-999130:-1
so has part: feature:998801-999130:-1:exon
so has part: feature:992652-992990:-1:exon
so has part: feature:985588-991502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998801-999130:-1:exon

position:998801:-1
position: 998801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:992652-992990:-1:exon

position:992652:-1
position: 992652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992990:-1
position: 992990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:985588-991502:-1:exon

position:991502:-1
position: 991502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101740549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740549
product: transmembrane protein 134, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_004928942.4
SIO_010081: LOC101740549
subclass of: SO_0000673
so part of: LOC101740549
location: complement(join(985588..991505,992652..992990,998801..999130))
location: region:985588-999130:-1
so has part: feature:998801-999130:-1:exon
so has part: feature:992652-992990:-1:exon
so has part: feature:985588-991505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998801-999130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992652-992990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985588-991505:-1:exon

position:991505:-1
position: 991505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101740549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 134 isoform X2
translation: MTKPFGNSEKRFSIDDAFEEETDEAIKVYGATGDRSPLQNKFKNGGDYISSKTYKCSEDTTSRDSDSLIHEYVEATQSMFCWNHPKVRENWKTVCAAVILLIVGVGLLGMGAFAVAEPENGLQGAVFFVAGMICFVPGAYHVVYIWLAARGQRGYDFYHLPLFT
SIO_010081: LOC101740549
subclass of: SO_0000673
so part of: LOC101740549
location: complement(join(991160..991502,992652..992803))
location: region:991160-992803:-1
so has part: feature:992652-992803:-1:exon
so has part: feature:991160-991502:-1:exon

XP_012548214.1
type: Protein
SIO_000068: ncbiprotein

position:991160:-1
position: 991160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992803:-1
position: 992803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992652-992803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991160-991502:-1:exon

LOC101740549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 134 isoform X1
translation: MTKPFGNSEKRFSIDDAFEEETDEAIKVYGATGDRSPLQNKFKNGGDYISSSKTYKCSEDTTSRDSDSLIHEYVEATQSMFCWNHPKVRENWKTVCAAVILLIVGVGLLGMGAFAVAEPENGLQGAVFFVAGMICFVPGAYHVVYIWLAARGQRGYDFYHLPLFT
SIO_010081: LOC101740549
subclass of: SO_0000673
so part of: LOC101740549
location: complement(join(991160..991505,992652..992803))
location: region:991160-992803:-1
so has part: feature:992652-992803:-1:exon
so has part: feature:991160-991505:-1:exon

XP_004928999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992652-992803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991160-991505:-1:exon

LOC101745872
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101745872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 999155..1004056
location: region:999155-1004056:1
so has part: feature:999155-1004056:1:exon
subclass of: SO_0000010

101745872
type: Gene
SIO_000068: ncbigene

position:999155:1
position: 999155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004056:1
position: 1004056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999155-1004056:1:exon

LOC101745872
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745872
product: probable ATP-dependent RNA helicase DDX55 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_004929053.4
SIO_010081: LOC101745872
subclass of: SO_0000673
so part of: LOC101745872
location: join(999155..999597,1000078..1000272,1000581..1000878,1001395..1001575,1001797..1002037,1002729..1003076,1003807..1004056)
location: region:999155-1004056:1
so has part: feature:999155-999597:1:exon
so has part: feature:1000078-1000272:1:exon
so has part: feature:1000581-1000878:1:exon
so has part: feature:1001395-1001575:1:exon
so has part: feature:1001797-1002037:1:exon
so has part: feature:1002729-1003076:1:exon
so has part: feature:1003807-1004056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:999155-999597:1:exon

position:999597:1
position: 999597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000078-1000272:1:exon

position:1000078:1
position: 1000078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000272:1
position: 1000272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1000581-1000878:1:exon

position:1000581:1
position: 1000581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000878:1
position: 1000878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1001395-1001575:1:exon

position:1001395:1
position: 1001395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001575:1
position: 1001575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1001797-1002037:1:exon

position:1001797:1
position: 1001797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002037:1
position: 1002037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1002729-1003076:1:exon

position:1002729:1
position: 1002729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003076:1
position: 1003076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1003807-1004056:1:exon

position:1003807:1
position: 1003807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101745872
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX55 homolog
translation: MANKDWSKVQPPLSKPVLNCINKHGFKTMTPIQAAVIPLLLSCKDVVAEAVTGSGKTLAFVVPMLEMLLKKKKDGPLRKDFVYVVIISPTRELATQIFKVIEDFLQEPELASTTLALLVGGRPIEVDALALQKGADIAVCTPGRLEDLLSERKQLNLAGRLKELELLVLDEADRLLDLGFSGTLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVVVSVKEKSTISTPLLLETYYVIVEAQDKFLFLLNFIRNRKIAKGLFFLPTCACVDYWTDVLPVFLPDIKIFGLHGKMKQKRHKILEKFRQADNTILLCTDLLARGLDIPEVEWVLQWEPPCQPSALVHRAGRAARGGARGCALLPLLTTEDAYVPFIKTNQMVELKDWRESDDQIKITDKLRERVLGILHEQQKKDRAIFDKGQRAFVSHMRAYTKHECNLLLQFKELPLGHIATSYGLLKLPLMPEIKPEHKQQFVGPKEEIDFNTIQYRDKQKETSRLQKLEEYKKSGVWPSKKKKKMVQTLPWEQAKQNKEERKEKRKKRKELKQKNPELKKGKKRKVITQEELDALAADVALIKKLKKRKITQDQFDREFEAD
SIO_010081: LOC101745872
subclass of: SO_0000673
so part of: LOC101745872
location: join(999301..999597,1000078..1000272,1000581..1000878,1001395..1001575,1001797..1002037,1002729..1003076,1003807..1004040)
location: region:999301-1004040:1
so has part: feature:999301-999597:1:exon
so has part: feature:1000078-1000272:1:exon
so has part: feature:1000581-1000878:1:exon
so has part: feature:1001395-1001575:1:exon
so has part: feature:1001797-1002037:1:exon
so has part: feature:1002729-1003076:1:exon
so has part: feature:1003807-1004040:1:exon

XP_004929110.1
type: Protein
SIO_000068: ncbiprotein

position:999301:1
position: 999301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004040:1
position: 1004040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999301-999597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000078-1000272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000581-1000878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1001395-1001575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001797-1002037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002729-1003076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1003807-1004040:1:exon

LOC101745724
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101745724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1004800..1043155)
location: region:1004800-1043155:-1
so has part: feature:1004800-1043155:-1:exon
subclass of: SO_0000010

101745724
type: Gene
SIO_000068: ncbigene

position:1004800:-1
position: 1004800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043155:-1
position: 1043155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004800-1043155:-1:exon

LOC101745724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745724
product: coronin-1C-A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021349719.2
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1004800..1010216,1010460..1010645,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928,1042776..1042940,1043004..1043155))
location: region:1004800-1043155:-1
so has part: feature:1043004-1043155:-1:exon
so has part: feature:1042776-1042940:-1:exon
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010645:-1:exon
so has part: feature:1004800-1010216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043004-1043155:-1:exon

position:1043004:-1
position: 1043004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1042776-1042940:-1:exon

position:1042776:-1
position: 1042776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042940:-1
position: 1042940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1041731-1041928:-1:exon

position:1041731:-1
position: 1041731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041928:-1
position: 1041928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1020222-1020344:-1:exon

position:1020222:-1
position: 1020222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020344:-1
position: 1020344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1019577-1019720:-1:exon

position:1019577:-1
position: 1019577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019720:-1
position: 1019720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1018812-1018942:-1:exon

position:1018812:-1
position: 1018812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018942:-1
position: 1018942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1017579-1017686:-1:exon

position:1017579:-1
position: 1017579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017686:-1
position: 1017686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1016765-1016939:-1:exon

position:1016765:-1
position: 1016765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016939:-1
position: 1016939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1015844-1015907:-1:exon

position:1015844:-1
position: 1015844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015907:-1
position: 1015907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1015262-1015350:-1:exon

position:1015262:-1
position: 1015262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015350:-1
position: 1015350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1014082-1014222:-1:exon

position:1014082:-1
position: 1014082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014222:-1
position: 1014222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1010460-1010645:-1:exon

position:1010460:-1
position: 1010460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010645:-1
position: 1010645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1004800-1010216:-1:exon

position:1010216:-1
position: 1010216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101745724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745724
product: coronin-1C-A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_021349718.2
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1004800..1010216,1010460..1010666,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928,1042776..1042940,1043004..1043155))
location: region:1004800-1043155:-1
so has part: feature:1043004-1043155:-1:exon
so has part: feature:1042776-1042940:-1:exon
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010666:-1:exon
so has part: feature:1004800-1010216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043004-1043155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1042776-1042940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041731-1041928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020222-1020344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019577-1019720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018812-1018942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1017579-1017686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016765-1016939:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015844-1015907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1015262-1015350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1014082-1014222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1010460-1010666:-1:exon

position:1010666:-1
position: 1010666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1004800-1010216:-1:exon

LOC101745724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745724
product: coronin-1C-A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_012692756.3
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1004800..1010216,1010460..1010666,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928,1042064..1042402))
location: region:1004800-1042402:-1
so has part: feature:1042064-1042402:-1:exon
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010666:-1:exon
so has part: feature:1004800-1010216:-1:exon

position:1042402:-1
position: 1042402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042064-1042402:-1:exon

position:1042064:-1
position: 1042064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1041731-1041928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020222-1020344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019577-1019720:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018812-1018942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017579-1017686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1016765-1016939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015844-1015907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015262-1015350:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1014082-1014222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1010460-1010666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1004800-1010216:-1:exon

LOC101745724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-1C-A isoform X2
translation: MEVDAENIKRHNSFTSPNRRAPISKRAGRERCHSYHAPTIKNPKSSVPTKSKENCLEVPRMSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIPADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVYHQRRVGLVLWHPTAQNVLLTAGSDNQIAIWNVGTGEVLITLDCHPDLIYSACWNWTGSKLLTTCRDKKIRIIDPRKGEVESEAIAHEGSKASRAIFLKHGLVFTTGFSRMSERQYSLRTPDALAEPIVTVEIDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEVTPEPPFVHYINTFQTPDPQRGIGMMPKRGCDVATCEIAKFYRLNNSGLCQVVSMTVPRKSELFQEDLYPDTLSDEASLTADEWLQGEDAEPCTMSLKGGYVSGRAATQLHVTKKNALATTKDRDKDRSPTPAAKLDRHADSHSGTPASATPPPAVSAAVEKQLSDLVDEIRKLKSVIVKQENRIRALEAVMKASPLPQPASPPPCAAPLVPDATNHETDGMAPDEV
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1010013..1010216,1010460..1010645,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928,1042776..1042940,1043004..1043018))
location: region:1010013-1043018:-1
so has part: feature:1043004-1043018:-1:exon
so has part: feature:1042776-1042940:-1:exon
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010645:-1:exon
so has part: feature:1010013-1010216:-1:exon

XP_021205394.1
type: Protein
SIO_000068: ncbiprotein

position:1010013:-1
position: 1010013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043018:-1
position: 1043018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043004-1043018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1042776-1042940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041731-1041928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020222-1020344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019577-1019720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018812-1018942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1017579-1017686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016765-1016939:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015844-1015907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1015262-1015350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1014082-1014222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1010460-1010645:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1010013-1010216:-1:exon

LOC101745724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-1C-A isoform X1
translation: MEVDAENIKRHNSFTSPNRRAPISKRAGRERCHSYHAPTIKNPKSSVPTKSKENCLEVPRMSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIPADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVYHQRRVGLVLWHPTAQNVLLTAGSDNQIAIWNVGTGEVLITLDCHPDLIYSACWNWTGSKLLTTCRDKKIRIIDPRKGEVESEAIAHEGSKASRAIFLKHGLVFTTGFSRMSERQYSLRTPDALAEPIVTVEIDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEVTPEPPFVHYINTFQTPDPQRGIGMMPKRGCDVATCEIAKFYRLNNSGLCQVVSMTVPRKSELFQEDLYPDTLSDEASLTADEWLQGEDAEPCTMSLKERALVVQGGYVSGRAATQLHVTKKNALATTKDRDKDRSPTPAAKLDRHADSHSGTPASATPPPAVSAAVEKQLSDLVDEIRKLKSVIVKQENRIRALEAVMKASPLPQPASPPPCAAPLVPDATNHETDGMAPDEV
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1010013..1010216,1010460..1010666,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928,1042776..1042940,1043004..1043018))
location: region:1010013-1043018:-1
so has part: feature:1043004-1043018:-1:exon
so has part: feature:1042776-1042940:-1:exon
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010666:-1:exon
so has part: feature:1010013-1010216:-1:exon

XP_021205393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043004-1043018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1042776-1042940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041731-1041928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020222-1020344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019577-1019720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018812-1018942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1017579-1017686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016765-1016939:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015844-1015907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1015262-1015350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1014082-1014222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1010460-1010666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1010013-1010216:-1:exon

LOC101745724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-1C-A isoform X3
translation: MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIPADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVYHQRRVGLVLWHPTAQNVLLTAGSDNQIAIWNVGTGEVLITLDCHPDLIYSACWNWTGSKLLTTCRDKKIRIIDPRKGEVESEAIAHEGSKASRAIFLKHGLVFTTGFSRMSERQYSLRTPDALAEPIVTVEIDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEVTPEPPFVHYINTFQTPDPQRGIGMMPKRGCDVATCEIAKFYRLNNSGLCQVVSMTVPRKSELFQEDLYPDTLSDEASLTADEWLQGEDAEPCTMSLKERALVVQGGYVSGRAATQLHVTKKNALATTKDRDKDRSPTPAAKLDRHADSHSGTPASATPPPAVSAAVEKQLSDLVDEIRKLKSVIVKQENRIRALEAVMKASPLPQPASPPPCAAPLVPDATNHETDGMAPDEV
SIO_010081: LOC101745724
subclass of: SO_0000673
so part of: LOC101745724
location: complement(join(1010013..1010216,1010460..1010666,1014082..1014222,1015262..1015350,1015844..1015907,1016765..1016939,1017579..1017686,1018812..1018942,1019577..1019720,1020222..1020344,1041731..1041928))
location: region:1010013-1041928:-1
so has part: feature:1041731-1041928:-1:exon
so has part: feature:1020222-1020344:-1:exon
so has part: feature:1019577-1019720:-1:exon
so has part: feature:1018812-1018942:-1:exon
so has part: feature:1017579-1017686:-1:exon
so has part: feature:1016765-1016939:-1:exon
so has part: feature:1015844-1015907:-1:exon
so has part: feature:1015262-1015350:-1:exon
so has part: feature:1014082-1014222:-1:exon
so has part: feature:1010460-1010666:-1:exon
so has part: feature:1010013-1010216:-1:exon

XP_012548210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1041731-1041928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020222-1020344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019577-1019720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018812-1018942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1017579-1017686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1016765-1016939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015844-1015907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015262-1015350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1014082-1014222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010460-1010666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1010013-1010216:-1:exon

LOC101740419
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1044087..1055988
location: region:1044087-1055988:1
so has part: feature:1044087-1055988:1:exon
subclass of: SO_0000010

101740419
type: Gene
SIO_000068: ncbigene

position:1044087:1
position: 1044087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055988:1
position: 1055988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044087-1055988:1:exon

LOC101740419
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740419
product: TLC domain-containing protein 3A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_012692636.3
SIO_010081: LOC101740419
subclass of: SO_0000673
so part of: LOC101740419
location: join(1044087..1044317,1048208..1048308,1051426..1051587,1052060..1052222,1053284..1053448,1054010..1054240,1055097..1055988)
location: region:1044087-1055988:1
so has part: feature:1044087-1044317:1:exon
so has part: feature:1048208-1048308:1:exon
so has part: feature:1051426-1051587:1:exon
so has part: feature:1052060-1052222:1:exon
so has part: feature:1053284-1053448:1:exon
so has part: feature:1054010-1054240:1:exon
so has part: feature:1055097-1055988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044087-1044317:1:exon

position:1044317:1
position: 1044317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048208-1048308:1:exon

position:1048208:1
position: 1048208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048308:1
position: 1048308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1051426-1051587:1:exon

position:1051426:1
position: 1051426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051587:1
position: 1051587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1052060-1052222:1:exon

position:1052060:1
position: 1052060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052222:1
position: 1052222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1053284-1053448:1:exon

position:1053284:1
position: 1053284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053448:1
position: 1053448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1054010-1054240:1:exon

position:1054010:1
position: 1054010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054240:1
position: 1054240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1055097-1055988:1:exon

position:1055097:1
position: 1055097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740419
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLC domain-containing protein 3A
translation: MDPTFTKPQNLRPAMWLLCISNVASLLAALNLVIWLEPDERISIPRGSALTVLGLVYFTSLFEILNVWALYTEAGSRIRHQYALSHGDVLDINNKLVSAVQAVYCVATGVVVCSHSCRRDFMRASHYMSEAYAWFGAAYFFYDIWSMYMVHIQMVSGGESMKEQVRRRVSERKAPVSFLKYCAHEPVILLHHVFIGGFGFLVIVHLRGSLGDCAFGWVYGMEASTPLVCARGVLARLRLKRSPLYLANGLLMLLTFLLCRVLSLPYVCWLYSRELGLTYAQAIQSLPTGCKISICILLLPQLYWFYLMSAGALKMLFRAGKPAELDGKAPRPTPPADRSAGDATEVTDKHS
SIO_010081: LOC101740419
subclass of: SO_0000673
so part of: LOC101740419
location: join(1044297..1044317,1048208..1048308,1051426..1051587,1052060..1052222,1053284..1053448,1054010..1054240,1055097..1055309)
location: region:1044297-1055309:1
so has part: feature:1044297-1044317:1:exon
so has part: feature:1048208-1048308:1:exon
so has part: feature:1051426-1051587:1:exon
so has part: feature:1052060-1052222:1:exon
so has part: feature:1053284-1053448:1:exon
so has part: feature:1054010-1054240:1:exon
so has part: feature:1055097-1055309:1:exon

XP_012548090.2
type: Protein
SIO_000068: ncbiprotein

position:1044297:1
position: 1044297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055309:1
position: 1055309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044297-1044317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048208-1048308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1051426-1051587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052060-1052222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053284-1053448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054010-1054240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055097-1055309:1:exon

LOC101740293
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1064934..1074397
location: region:1064934-1074397:1
so has part: feature:1064934-1074397:1:exon
subclass of: SO_0000010

101740293
type: Gene
SIO_000068: ncbigene

position:1064934:1
position: 1064934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074397:1
position: 1074397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064934-1074397:1:exon

LOC101740293
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740293
product: brachyurin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 88 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_004928940.3
SIO_010081: LOC101740293
subclass of: SO_0000673
so part of: LOC101740293
location: join(1064934..1065096,1066066..1066114,1067485..1067653,1069404..1069573,1070688..1070789,1071868..1072007,1072888..1073002,1074036..1074397)
location: region:1064934-1074397:1
so has part: feature:1064934-1065096:1:exon
so has part: feature:1066066-1066114:1:exon
so has part: feature:1067485-1067653:1:exon
so has part: feature:1069404-1069573:1:exon
so has part: feature:1070688-1070789:1:exon
so has part: feature:1071868-1072007:1:exon
so has part: feature:1072888-1073002:1:exon
so has part: feature:1074036-1074397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1064934-1065096:1:exon

position:1065096:1
position: 1065096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066066-1066114:1:exon

position:1066066:1
position: 1066066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066114:1
position: 1066114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1067485-1067653:1:exon

position:1067485:1
position: 1067485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067653:1
position: 1067653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1069404-1069573:1:exon

position:1069404:1
position: 1069404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069573:1
position: 1069573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070688-1070789:1:exon

position:1070688:1
position: 1070688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070789:1
position: 1070789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071868-1072007:1:exon

position:1071868:1
position: 1071868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072007:1
position: 1072007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1072888-1073002:1:exon

position:1072888:1
position: 1072888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073002:1
position: 1073002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1074036-1074397:1:exon

position:1074036:1
position: 1074036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740293
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brachyurin
translation: MLGSSGLLFLLVLCGQSLSQKVKPYFIEDINKDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGRITVVIRAGVTNLTTPEYISESTEWYNYPTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYLRAVANPTCALNFGTLITPNAICARFFNVTSQSTCQGDSGGPLVHVDPQGVPILIGVTSFVAGGEFGCHSGFPAGFIRPGPFHDWFYRVSGVDFENLDHDEVTEEPEPETTTSPPTTVTPEPEEEEESGEDSEEDSEEDPDLSELLKKLEVKVKVKVKVNKFKLKKKVHVKKRIPARSH
SIO_010081: LOC101740293
subclass of: SO_0000673
so part of: LOC101740293
location: join(1065049..1065096,1066066..1066114,1067485..1067653,1069404..1069573,1070688..1070789,1071868..1072007,1072888..1073002,1074036..1074352)
location: region:1065049-1074352:1
so has part: feature:1065049-1065096:1:exon
so has part: feature:1066066-1066114:1:exon
so has part: feature:1067485-1067653:1:exon
so has part: feature:1069404-1069573:1:exon
so has part: feature:1070688-1070789:1:exon
so has part: feature:1071868-1072007:1:exon
so has part: feature:1072888-1073002:1:exon
so has part: feature:1074036-1074352:1:exon

XP_004928997.1
type: Protein
SIO_000068: ncbiprotein

position:1065049:1
position: 1065049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074352:1
position: 1074352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065049-1065096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066066-1066114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067485-1067653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069404-1069573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070688-1070789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071868-1072007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072888-1073002:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074036-1074352:1:exon

LOC101745432
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101745432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1075211..1098417
location: region:1075211-1098417:1
so has part: feature:1075211-1098417:1:exon
subclass of: SO_0000010

101745432
type: Gene
SIO_000068: ncbigene

position:1075211:1
position: 1075211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098417:1
position: 1098417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075211-1098417:1:exon

LOC101745432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745432
product: LIM domain kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038016390.1
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075211..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1098417)
location: region:1075211-1098417:1
so has part: feature:1075211-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1098417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075211-1075486:1:exon

position:1075486:1
position: 1075486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

position:1076281:1
position: 1076281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076371:1
position: 1076371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

position:1077056:1
position: 1077056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077170:1
position: 1077170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

position:1078497:1
position: 1078497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078627:1
position: 1078627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

position:1080144:1
position: 1080144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080257:1
position: 1080257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

position:1080877:1
position: 1080877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080963:1
position: 1080963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

position:1085715:1
position: 1085715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085847:1
position: 1085847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

position:1086728:1
position: 1086728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086981:1
position: 1086981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

position:1087327:1
position: 1087327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087441:1
position: 1087441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

position:1087974:1
position: 1087974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088102:1
position: 1088102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

position:1089588:1
position: 1089588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089713:1
position: 1089713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

position:1090869:1
position: 1090869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091000:1
position: 1091000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

position:1092431:1
position: 1092431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092520:1
position: 1092520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1093996-1094150:1:exon

position:1093996:1
position: 1093996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094150:1
position: 1094150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1094943-1095072:1:exon

position:1094943:1
position: 1094943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095072:1
position: 1095072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1095668-1095883:1:exon

position:1095668:1
position: 1095668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095883:1
position: 1095883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1096006-1098417:1:exon

position:1096006:1
position: 1096006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101745432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745432
product: LIM domain kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038016388.1
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075212..1075486,1076284..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1098417)
location: region:1075212-1098417:1
so has part: feature:1075212-1075486:1:exon
so has part: feature:1076284-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1098417:1:exon

position:1075212:1
position: 1075212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075212-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076284-1076371:1:exon

position:1076284:1
position: 1076284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092856-1092954:1:exon

position:1092856:1
position: 1092856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092954:1
position: 1092954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1096006-1098417:1:exon

LOC101745432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745432
product: LIM domain kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038016387.1
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075214..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1098417)
location: region:1075214-1098417:1
so has part: feature:1075214-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1098417:1:exon

position:1075214:1
position: 1075214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075214-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092856-1092954:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1096006-1098417:1:exon

LOC101745432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745432
product: LIM domain kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_038016389.1
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075217..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1098417)
location: region:1075217-1098417:1
so has part: feature:1075217-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1098417:1:exon

position:1075217:1
position: 1075217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075217-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092856-1092954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096006-1098417:1:exon

LOC101745432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X1
translation: MESPKAKEALSCSGCLNDIGYDEYVSALSQHWHKDCFRCSVCDDLLSTWYFEKAGLLFCQKDYWAKYGESCQQCTQVITGPVMAAGEHRFHPECFACHSCAAHIEDGESYALLERSILYCGKCYRAPHTRTHAIHVVEVPPNAVRISTGDKGSLTVSDSLCAGKMSRLARVLVRAALSLCIQLTCHRIDSSCGLLTLHIGDRILEINGSPVGNRPADDVQRALGRPDQIIQLTIEHSPETVSRPVSMCAPRDTEKPCKVTEGVMDKGTYEGKKERLFKRKGEDGGKPRMMKRRQTPSSPLLGDKEKSSSMSKLLDVVDGEESNGVQGDLSRARSFRADTSSAGQKVFRACDLLQGELLGSGFFGEVYKVTHQDTGEVMVLKQLYRVDEEAQRNFLKEVAVLRSLHHPNVLRFVGVLYKDKRLHLVTEYVAGGTLHQLLQDPSASLSWACRGRLARDVSRGVGYLHRRNVIHRDLNSHNCLVREDRTVIVADFGLARIVQRTTAHGSLKRKRYTVVGNPYWMAPEMMNGNVYDEKVDVFSFGIILCEIIGRVSADPDCLPRRSDFGLNEEVFLEKFCASCPEPFYRIAFLACNLDPDDRPPMEVIETWLEALVEQLSESELKENLDVLCNDLDSPTEGSLVKSDSQSTLEETRSISYRPLVPVALGKCVSASQVGAGGGGPARGGRWGRAHSHQALHTPGYILQARGPTIDITQVDDISEWLEPTPLKRSQPDPQLHRPRHQVLLPAFLRNQSVEELRPKHVPSDDSSDDSEAGVTSAAPQPAVTYRSPAERRLPEVDVRRYNIDFLAGSPVMAQGIKNIPKIVERDKTNEKTGFFTKKLLSPKLSRLFRPNATEAGGKPHADLNKSNSTFFVQQPPALGRSSYRIRPVGDAGADVLQSDIKLASMGRPMTPTLRRCPDRPDLADARFSCRDFRTKMINNDHVKAHITRGAPVGQPHVQRRRNPDKSEPRMGISRSNYVSLANLKINNKANGLDVTERARREVNDNSPVERVV
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075465..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1096905)
location: region:1075465-1096905:1
so has part: feature:1075465-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1096905:1:exon

XP_037872315.1
type: Protein
SIO_000068: ncbiprotein

position:1075465:1
position: 1075465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096905:1
position: 1096905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075465-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092856-1092954:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1096006-1096905:1:exon

LOC101745432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X4
translation: MESPKAKEALSCSGCLNDIGYDEYVSALSQHWHKDCFRCSVCDDLLSTWYFEKAGLLFCQKDYWAKYGESCQQCTQVITGPVMAAGEHRFHPECFACHSCAAHIEDGESYALLERSILYCGKCYRAPHTRTHAIHVVEVPPNAVRISTGDKGSLTVSDSLCAGKMSRLARVLVRAALSLCIQLTCHRIDSSCGLLTLHIGDRILEINGSPVGNRPADDVQRALGRPDQIIQLTIEHSPETVSRPVSMCAPRDTEKPCKVTEGVMDKGTYEGKKERLFKRKGEDGGKPRMMKRRQTPSSPLLGDKEKSSSMSKLLDVVDGEESNGVQGDLSRARSFRADTSSAGQKVFRACDLLQGELLGSGFFGEVYKVTHQDTGEVMVLKQLYRVDEEAQRNFLKEVAVLRSLHHPNVLRFVGVLYKDKRLHLVTEYVAGGTLHQLLQDPSASLSWACRGRLARDVSRGVGYLHRRNVIHRDLNSHNCLVREDRTVIVADFGLARIVQRTTAHGSLKRKRYTIIGRVSADPDCLPRRSDFGLNEEVFLEKFCASCPEPFYRIAFLACNLDPDDRPPMEVIETWLEALVEQLSESELKENLDVLCNDLDSPTEGSLVKSDSQSTLEETRSISYRPLVPVALGKCVSASQVGAGGGGPARGGRWGRAHSHQALHTPGYILQARGPTIDITQVDDISEWLEPTPLKRSQPDPQLHRPRHQVLLPAFLRNQSVEELRPKHVPSDDSSDDSEAGVTSAAPQPAVTYRSPAERRLPEVDVRRYNIDFLAGSPVMAQGIKNIPKIVERDKTNEKTGFFTKKLLSPKLSRLFRPNATEAGGKPHADLNKSNSTFFVQQPPALGRSSYRIRPVGDAGADVLQSDIKLASMGRPMTPTLRRCPDRPDLADARFSCRDFRTKMINNDHVKAHITRGAPVGQPHVQRRRNPDKSEPRMGISRSNYVSLANLKINNKANGLDVTERARREVNDNSPVERVV
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075465..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1096905)
location: region:1075465-1096905:1
so has part: feature:1075465-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1096905:1:exon

XP_037872318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075465-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096006-1096905:1:exon

LOC101745432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X3
translation: MESPKAKEALSCSGCLNDIGYDEYVSALSQHWHKDCFRCSVCDDLLSTWYFEKAGLLFCQKDYWAKYGESCQQCTQVITGPVMAAGEHRFHPECFACHSCAAHIEDGESYALLERSILYCGKCYRAPHTRTHAIHVVEVPPNAVRISTGDKGSLTVSEIDSSCGLLTLHIGDRILEINGSPVGNRPADDVQRALGRPDQIIQLTIEHSPETVSRPVSMCAPRDTEKPCKVTEGVMDKGTYEGKKERLFKRKGEDGGKPRMMKRRQTPSSPLLGDKEKSSSMSKLLDVVDGEESNGVQGDLSRARSFRADTSSAGQKVFRACDLLQGELLGSGFFGEVYKVTHQDTGEVMVLKQLYRVDEEAQRNFLKEVAVLRSLHHPNVLRFVGVLYKDKRLHLVTEYVAGGTLHQLLQDPSASLSWACRGRLARDVSRGVGYLHRRNVIHRDLNSHNCLVREDRTVIVADFGLARIVQRTTAHGSLKRKRYTVVGNPYWMAPEMMNGNVYDEKVDVFSFGIILCEIIGRVSADPDCLPRRSDFGLNEEVFLEKFCASCPEPFYRIAFLACNLDPDDRPPMEVIETWLEALVEQLSESELKENLDVLCNDLDSPTEGSLVKSDSQSTLEETRSISYRPLVPVALGKCVSASQVGAGGGGPARGGRWGRAHSHQALHTPGYILQARGPTIDITQVDDISEWLEPTPLKRSQPDPQLHRPRHQVLLPAFLRNQSVEELRPKHVPSDDSSDDSEAGVTSAAPQPAVTYRSPAERRLPEVDVRRYNIDFLAGSPVMAQGIKNIPKIVERDKTNEKTGFFTKKLLSPKLSRLFRPNATEAGGKPHADLNKSNSTFFVQQPPALGRSSYRIRPVGDAGADVLQSDIKLASMGRPMTPTLRRCPDRPDLADARFSCRDFRTKMINNDHVKAHITRGAPVGQPHVQRRRNPDKSEPRMGISRSNYVSLANLKINNKANGLDVTERARREVNDNSPVERVV
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075465..1075486,1076281..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1096905)
location: region:1075465-1096905:1
so has part: feature:1075465-1075486:1:exon
so has part: feature:1076281-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1096905:1:exon

XP_037872317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075465-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076281-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092856-1092954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096006-1096905:1:exon

LOC101745432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X2
translation: MESPKAKALSCSGCLNDIGYDEYVSALSQHWHKDCFRCSVCDDLLSTWYFEKAGLLFCQKDYWAKYGESCQQCTQVITGPVMAAGEHRFHPECFACHSCAAHIEDGESYALLERSILYCGKCYRAPHTRTHAIHVVEVPPNAVRISTGDKGSLTVSDSLCAGKMSRLARVLVRAALSLCIQLTCHRIDSSCGLLTLHIGDRILEINGSPVGNRPADDVQRALGRPDQIIQLTIEHSPETVSRPVSMCAPRDTEKPCKVTEGVMDKGTYEGKKERLFKRKGEDGGKPRMMKRRQTPSSPLLGDKEKSSSMSKLLDVVDGEESNGVQGDLSRARSFRADTSSAGQKVFRACDLLQGELLGSGFFGEVYKVTHQDTGEVMVLKQLYRVDEEAQRNFLKEVAVLRSLHHPNVLRFVGVLYKDKRLHLVTEYVAGGTLHQLLQDPSASLSWACRGRLARDVSRGVGYLHRRNVIHRDLNSHNCLVREDRTVIVADFGLARIVQRTTAHGSLKRKRYTVVGNPYWMAPEMMNGNVYDEKVDVFSFGIILCEIIGRVSADPDCLPRRSDFGLNEEVFLEKFCASCPEPFYRIAFLACNLDPDDRPPMEVIETWLEALVEQLSESELKENLDVLCNDLDSPTEGSLVKSDSQSTLEETRSISYRPLVPVALGKCVSASQVGAGGGGPARGGRWGRAHSHQALHTPGYILQARGPTIDITQVDDISEWLEPTPLKRSQPDPQLHRPRHQVLLPAFLRNQSVEELRPKHVPSDDSSDDSEAGVTSAAPQPAVTYRSPAERRLPEVDVRRYNIDFLAGSPVMAQGIKNIPKIVERDKTNEKTGFFTKKLLSPKLSRLFRPNATEAGGKPHADLNKSNSTFFVQQPPALGRSSYRIRPVGDAGADVLQSDIKLASMGRPMTPTLRRCPDRPDLADARFSCRDFRTKMINNDHVKAHITRGAPVGQPHVQRRRNPDKSEPRMGISRSNYVSLANLKINNKANGLDVTERARREVNDNSPVERVV
SIO_010081: LOC101745432
subclass of: SO_0000673
so part of: LOC101745432
location: join(1075465..1075486,1076284..1076371,1077056..1077170,1078497..1078627,1080144..1080257,1080877..1080963,1085715..1085847,1086728..1086981,1087327..1087441,1087974..1088102,1089588..1089713,1090869..1091000,1092431..1092520,1092856..1092954,1093996..1094150,1094943..1095072,1095668..1095883,1096006..1096905)
location: region:1075465-1096905:1
so has part: feature:1075465-1075486:1:exon
so has part: feature:1076284-1076371:1:exon
so has part: feature:1077056-1077170:1:exon
so has part: feature:1078497-1078627:1:exon
so has part: feature:1080144-1080257:1:exon
so has part: feature:1080877-1080963:1:exon
so has part: feature:1085715-1085847:1:exon
so has part: feature:1086728-1086981:1:exon
so has part: feature:1087327-1087441:1:exon
so has part: feature:1087974-1088102:1:exon
so has part: feature:1089588-1089713:1:exon
so has part: feature:1090869-1091000:1:exon
so has part: feature:1092431-1092520:1:exon
so has part: feature:1092856-1092954:1:exon
so has part: feature:1093996-1094150:1:exon
so has part: feature:1094943-1095072:1:exon
so has part: feature:1095668-1095883:1:exon
so has part: feature:1096006-1096905:1:exon

XP_037872316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075465-1075486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076284-1076371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077056-1077170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078497-1078627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080144-1080257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080877-1080963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085715-1085847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086728-1086981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087327-1087441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087974-1088102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089588-1089713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090869-1091000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092431-1092520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092856-1092954:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093996-1094150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1094943-1095072:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1095668-1095883:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1096006-1096905:1:exon

LOC101740149
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1103464..1110705
location: region:1103464-1110705:1
so has part: feature:1103464-1110705:1:exon
subclass of: SO_0000010

101740149
type: Gene
SIO_000068: ncbigene

position:1103464:1
position: 1103464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110705:1
position: 1110705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103464-1110705:1:exon

LOC101740149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740149
product: uncharacterized LOC101740149, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_012692838.3
SIO_010081: LOC101740149
subclass of: SO_0000673
so part of: LOC101740149
location: join(1103464..1103636,1104331..1104456,1105534..1106772)
location: region:1103464-1106772:1
so has part: feature:1103464-1103636:1:exon
so has part: feature:1104331-1104456:1:exon
so has part: feature:1105534-1106772:1:exon

position:1106772:1
position: 1106772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103464-1103636:1:exon

position:1103636:1
position: 1103636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104331-1104456:1:exon

position:1104331:1
position: 1104331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104456:1
position: 1104456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105534-1106772:1:exon

position:1105534:1
position: 1105534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740149
product: uncharacterized LOC101740149, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_004928939.4
SIO_010081: LOC101740149
subclass of: SO_0000673
so part of: LOC101740149
location: join(1103482..1103636,1104331..1104456,1109095..1110705)
location: region:1103482-1110705:1
so has part: feature:1103482-1103636:1:exon
so has part: feature:1104331-1104456:1:exon
so has part: feature:1109095-1110705:1:exon

position:1103482:1
position: 1103482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103482-1103636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104331-1104456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109095-1110705:1:exon

position:1109095:1
position: 1109095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101740149 isoform X1
translation: MTEKDITIEELEETVKQTDVQIDLMDWKMENVEKELVQPINAQETCIMNLLKSVSEVRSDYQQLRRELVEVQALQQELSSKLRAQVRLVHGKFARLRQRLVAASPPR
SIO_010081: LOC101740149
subclass of: SO_0000673
so part of: LOC101740149
location: join(1103595..1103636,1104331..1104456,1109095..1109250)
location: region:1103595-1109250:1
so has part: feature:1103595-1103636:1:exon
so has part: feature:1104331-1104456:1:exon
so has part: feature:1109095-1109250:1:exon

XP_004928996.1
type: Protein
SIO_000068: ncbiprotein

position:1103595:1
position: 1103595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109250:1
position: 1109250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103595-1103636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104331-1104456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109095-1109250:1:exon

LOC101740149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101740149 isoform X2
translation: MTEKDITIEELEETVKQTDVQIDLMDWKMENVEKELVQPINAQETCIMNLLKSVSEPVALMLTPG
SIO_010081: LOC101740149
subclass of: SO_0000673
so part of: LOC101740149
location: join(1103595..1103636,1104331..1104456,1105534..1105563)
location: region:1103595-1105563:1
so has part: feature:1103595-1103636:1:exon
so has part: feature:1104331-1104456:1:exon
so has part: feature:1105534-1105563:1:exon

XP_012548292.1
type: Protein
SIO_000068: ncbiprotein

position:1105563:1
position: 1105563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103595-1103636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104331-1104456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105534-1105563:1:exon

LOC101745292
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101745292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1127804..1168025)
location: region:1127804-1168025:-1
so has part: feature:1127804-1168025:-1:exon
subclass of: SO_0000010

101745292
type: Gene
SIO_000068: ncbigene

position:1127804:-1
position: 1127804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168025:-1
position: 1168025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127804-1168025:-1:exon

LOC101745292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745292
product: protein strawberry notch, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_038016315.1
SIO_010081: LOC101745292
subclass of: SO_0000673
so part of: LOC101745292
location: complement(join(1127804..1129331,1129788..1130107,1130601..1130782,1135972..1136114,1136752..1136863,1137226..1137398,1139085..1139273,1139846..1139922,1140493..1140683,1141649..1141809,1142662..1142862,1143482..1143670,1143976..1144154,1144243..1144388,1145133..1145267,1145693..1145846,1149543..1149784,1150395..1150559,1151758..1151933,1152506..1152715,1153579..1153657,1154376..1154533,1162694..1162810,1163948..1164052,1164726..1164813,1167850..1168025))
location: region:1127804-1168025:-1
so has part: feature:1167850-1168025:-1:exon
so has part: feature:1164726-1164813:-1:exon
so has part: feature:1163948-1164052:-1:exon
so has part: feature:1162694-1162810:-1:exon
so has part: feature:1154376-1154533:-1:exon
so has part: feature:1153579-1153657:-1:exon
so has part: feature:1152506-1152715:-1:exon
so has part: feature:1151758-1151933:-1:exon
so has part: feature:1150395-1150559:-1:exon
so has part: feature:1149543-1149784:-1:exon
so has part: feature:1145693-1145846:-1:exon
so has part: feature:1145133-1145267:-1:exon
so has part: feature:1144243-1144388:-1:exon
so has part: feature:1143976-1144154:-1:exon
so has part: feature:1143482-1143670:-1:exon
so has part: feature:1142662-1142862:-1:exon
so has part: feature:1141649-1141809:-1:exon
so has part: feature:1140493-1140683:-1:exon
so has part: feature:1139846-1139922:-1:exon
so has part: feature:1139085-1139273:-1:exon
so has part: feature:1137226-1137398:-1:exon
so has part: feature:1136752-1136863:-1:exon
so has part: feature:1135972-1136114:-1:exon
so has part: feature:1130601-1130782:-1:exon
so has part: feature:1129788-1130107:-1:exon
so has part: feature:1127804-1129331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167850-1168025:-1:exon

position:1167850:-1
position: 1167850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164726-1164813:-1:exon

position:1164726:-1
position: 1164726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164813:-1
position: 1164813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163948-1164052:-1:exon

position:1163948:-1
position: 1163948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164052:-1
position: 1164052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1162694-1162810:-1:exon

position:1162694:-1
position: 1162694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162810:-1
position: 1162810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154376-1154533:-1:exon

position:1154376:-1
position: 1154376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154533:-1
position: 1154533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1153579-1153657:-1:exon

position:1153579:-1
position: 1153579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153657:-1
position: 1153657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1152506-1152715:-1:exon

position:1152506:-1
position: 1152506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152715:-1
position: 1152715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1151758-1151933:-1:exon

position:1151758:-1
position: 1151758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151933:-1
position: 1151933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1150395-1150559:-1:exon

position:1150395:-1
position: 1150395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150559:-1
position: 1150559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1149543-1149784:-1:exon

position:1149543:-1
position: 1149543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149784:-1
position: 1149784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1145693-1145846:-1:exon

position:1145693:-1
position: 1145693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145846:-1
position: 1145846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1145133-1145267:-1:exon

position:1145133:-1
position: 1145133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145267:-1
position: 1145267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1144243-1144388:-1:exon

position:1144243:-1
position: 1144243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144388:-1
position: 1144388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1143976-1144154:-1:exon

position:1143976:-1
position: 1143976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144154:-1
position: 1144154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1143482-1143670:-1:exon

position:1143482:-1
position: 1143482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143670:-1
position: 1143670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1142662-1142862:-1:exon

position:1142662:-1
position: 1142662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142862:-1
position: 1142862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1141649-1141809:-1:exon

position:1141649:-1
position: 1141649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141809:-1
position: 1141809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1140493-1140683:-1:exon

position:1140493:-1
position: 1140493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140683:-1
position: 1140683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1139846-1139922:-1:exon

position:1139846:-1
position: 1139846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139922:-1
position: 1139922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1139085-1139273:-1:exon

position:1139085:-1
position: 1139085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139273:-1
position: 1139273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1137226-1137398:-1:exon

position:1137226:-1
position: 1137226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137398:-1
position: 1137398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1136752-1136863:-1:exon

position:1136752:-1
position: 1136752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136863:-1
position: 1136863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1135972-1136114:-1:exon

position:1135972:-1
position: 1135972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136114:-1
position: 1136114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1130601-1130782:-1:exon

position:1130601:-1
position: 1130601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130782:-1
position: 1130782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1129788-1130107:-1:exon

position:1129788:-1
position: 1129788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130107:-1
position: 1130107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1127804-1129331:-1:exon

position:1129331:-1
position: 1129331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101745292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745292
product: protein strawberry notch, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_038016314.1
SIO_010081: LOC101745292
subclass of: SO_0000673
so part of: LOC101745292
location: complement(join(1127804..1129331,1129788..1130107,1130601..1130782,1135972..1136114,1136752..1136863,1137226..1137398,1139085..1139273,1139846..1139922,1140493..1140683,1141649..1141809,1142662..1142862,1143482..1143670,1143976..1144154,1144243..1144388,1145133..1145267,1145693..1145846,1149543..1149784,1150395..1150559,1151758..1151933,1152506..1152715,1153579..1153657,1154376..1154533,1159727..1159798,1162694..1162810,1163948..1164052,1164726..1164813,1167850..1168025))
location: region:1127804-1168025:-1
so has part: feature:1167850-1168025:-1:exon
so has part: feature:1164726-1164813:-1:exon
so has part: feature:1163948-1164052:-1:exon
so has part: feature:1162694-1162810:-1:exon
so has part: feature:1159727-1159798:-1:exon
so has part: feature:1154376-1154533:-1:exon
so has part: feature:1153579-1153657:-1:exon
so has part: feature:1152506-1152715:-1:exon
so has part: feature:1151758-1151933:-1:exon
so has part: feature:1150395-1150559:-1:exon
so has part: feature:1149543-1149784:-1:exon
so has part: feature:1145693-1145846:-1:exon
so has part: feature:1145133-1145267:-1:exon
so has part: feature:1144243-1144388:-1:exon
so has part: feature:1143976-1144154:-1:exon
so has part: feature:1143482-1143670:-1:exon
so has part: feature:1142662-1142862:-1:exon
so has part: feature:1141649-1141809:-1:exon
so has part: feature:1140493-1140683:-1:exon
so has part: feature:1139846-1139922:-1:exon
so has part: feature:1139085-1139273:-1:exon
so has part: feature:1137226-1137398:-1:exon
so has part: feature:1136752-1136863:-1:exon
so has part: feature:1135972-1136114:-1:exon
so has part: feature:1130601-1130782:-1:exon
so has part: feature:1129788-1130107:-1:exon
so has part: feature:1127804-1129331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167850-1168025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164726-1164813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163948-1164052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162694-1162810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159727-1159798:-1:exon

position:1159727:-1
position: 1159727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159798:-1
position: 1159798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1154376-1154533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1153579-1153657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152506-1152715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151758-1151933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1150395-1150559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149543-1149784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1145693-1145846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1145133-1145267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1144243-1144388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143976-1144154:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1143482-1143670:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1142662-1142862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1141649-1141809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1140493-1140683:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1139846-1139922:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1139085-1139273:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1137226-1137398:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1136752-1136863:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1135972-1136114:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1130601-1130782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1129788-1130107:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1127804-1129331:-1:exon

LOC101745292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein strawberry notch isoform X2
translation: MSRRAYAEDPAPSDDSDFDDEEDPDNLEVPGGGKTLAAAARMADKKVPQATAPQVTVRPTTNPLAAPSGVAFGQTHNGKPIKIQASSLTKPFNLLNLPGVGRGGMEMVGITGVNSYLLQNLNQIIAAGMGGSMLGQFSQQLPPWAGQIKPGMWHQDKMPGEEEEVDDEEMGVAETYADYMPPKVKLGRKHPDPVVETASLSSVEPVDVTYKLSLPDETIRGGLLSALQLEAVVYASQAHEHTLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYIKGRKRAIWVSVSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPLSDAFKETYDKSVALWVEAMQRFTEAAELIDAESRMRKTMWGQFWSAHQRFFKYLCIAAKVNHAVVTAREAVKCGKCVVIGLQSTGEARTLDQLERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGLGANRPPPPAHAALPAPPHNGTNGRDDDANTSKRKLTSRQQANAAAKRARGGSSSDEFVRGGSSDELEMESDEEQQRAASDSDLSDFNPFRGGSDSDDEPWLNRKKKPKKKKAASPKKKTSTTQDKIENMFTRKNSAPPAPTLTVTTSSGASLTGTPVGTNGLYLGRSRSSAPPRSAIERACSMKEELLAAVHRLGRRLPPNTLDQLVDELGGTDNVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFACTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTALEAVMRAIMKYETPLVPAPADYHGDFFQDVASALVGVGLIVNSDAAPGVLALDKDYNNMSKFLNRILGMPVELQNRLFKYFTDTLAAVMEQAKRSGRFDLGILDLGSAGETVRRLRCVRFLRRHATGRAPVELHTVSSERGMEWTEALEKHSELTGPKEGFYLSQQARNSKHTAVLCAAALTNSKKDKLSKKDLMFQIYRPNTGLQLRLESLAEIEKKYRKVDADEAESWWRAQHAASLRVCSHAYWRDACRAADCEVGLRRRLHHVLAGSVLAVWARVEATLAARSQLHKMQVVRIKTDDGLKIVGTLIPKNCVEPLKESLAADAVSVTEQTFEQTELH
SIO_010081: LOC101745292
subclass of: SO_0000673
so part of: LOC101745292
location: complement(join(1129228..1129331,1129788..1130107,1130601..1130782,1135972..1136114,1136752..1136863,1137226..1137398,1139085..1139273,1139846..1139922,1140493..1140683,1141649..1141809,1142662..1142862,1143482..1143670,1143976..1144154,1144243..1144388,1145133..1145267,1145693..1145846,1149543..1149784,1150395..1150559,1151758..1151933,1152506..1152715,1153579..1153657,1154376..1154533,1162694..1162810,1163948..1164052,1164726..1164813,1167850..1167852))
location: region:1129228-1167852:-1
so has part: feature:1167850-1167852:-1:exon
so has part: feature:1164726-1164813:-1:exon
so has part: feature:1163948-1164052:-1:exon
so has part: feature:1162694-1162810:-1:exon
so has part: feature:1154376-1154533:-1:exon
so has part: feature:1153579-1153657:-1:exon
so has part: feature:1152506-1152715:-1:exon
so has part: feature:1151758-1151933:-1:exon
so has part: feature:1150395-1150559:-1:exon
so has part: feature:1149543-1149784:-1:exon
so has part: feature:1145693-1145846:-1:exon
so has part: feature:1145133-1145267:-1:exon
so has part: feature:1144243-1144388:-1:exon
so has part: feature:1143976-1144154:-1:exon
so has part: feature:1143482-1143670:-1:exon
so has part: feature:1142662-1142862:-1:exon
so has part: feature:1141649-1141809:-1:exon
so has part: feature:1140493-1140683:-1:exon
so has part: feature:1139846-1139922:-1:exon
so has part: feature:1139085-1139273:-1:exon
so has part: feature:1137226-1137398:-1:exon
so has part: feature:1136752-1136863:-1:exon
so has part: feature:1135972-1136114:-1:exon
so has part: feature:1130601-1130782:-1:exon
so has part: feature:1129788-1130107:-1:exon
so has part: feature:1129228-1129331:-1:exon

XP_037872243.1
type: Protein
SIO_000068: ncbiprotein

position:1129228:-1
position: 1129228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167852:-1
position: 1167852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167850-1167852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164726-1164813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163948-1164052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162694-1162810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154376-1154533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153579-1153657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152506-1152715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151758-1151933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150395-1150559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149543-1149784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1145693-1145846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1145133-1145267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1144243-1144388:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1143976-1144154:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143482-1143670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1142662-1142862:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1141649-1141809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1140493-1140683:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1139846-1139922:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1139085-1139273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1137226-1137398:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1136752-1136863:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1135972-1136114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1130601-1130782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1129788-1130107:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1129228-1129331:-1:exon

LOC101745292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein strawberry notch isoform X1
translation: MSRRAYAEDPAPSDDSDFDDEEDPDNLEVPGGGKTLAAAARMADKKVPQATAPQVTVRPTTNPLAAPSGVAFGQTHNGKPIKIQASSLTKPFNLLNLPGVGRGGMGAAMAPFAAGSSAAFNAASLLAQMEMVGITGVNSYLLQNLNQIIAAGMGGSMLGQFSQQLPPWAGQIKPGMWHQDKMPGEEEEVDDEEMGVAETYADYMPPKVKLGRKHPDPVVETASLSSVEPVDVTYKLSLPDETIRGGLLSALQLEAVVYASQAHEHTLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYIKGRKRAIWVSVSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPLSDAFKETYDKSVALWVEAMQRFTEAAELIDAESRMRKTMWGQFWSAHQRFFKYLCIAAKVNHAVVTAREAVKCGKCVVIGLQSTGEARTLDQLERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGLGANRPPPPAHAALPAPPHNGTNGRDDDANTSKRKLTSRQQANAAAKRARGGSSSDEFVRGGSSDELEMESDEEQQRAASDSDLSDFNPFRGGSDSDDEPWLNRKKKPKKKKAASPKKKTSTTQDKIENMFTRKNSAPPAPTLTVTTSSGASLTGTPVGTNGLYLGRSRSSAPPRSAIERACSMKEELLAAVHRLGRRLPPNTLDQLVDELGGTDNVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFACTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTALEAVMRAIMKYETPLVPAPADYHGDFFQDVASALVGVGLIVNSDAAPGVLALDKDYNNMSKFLNRILGMPVELQNRLFKYFTDTLAAVMEQAKRSGRFDLGILDLGSAGETVRRLRCVRFLRRHATGRAPVELHTVSSERGMEWTEALEKHSELTGPKEGFYLSQQARNSKHTAVLCAAALTNSKKDKLSKKDLMFQIYRPNTGLQLRLESLAEIEKKYRKVDADEAESWWRAQHAASLRVCSHAYWRDACRAADCEVGLRRRLHHVLAGSVLAVWARVEATLAARSQLHKMQVVRIKTDDGLKIVGTLIPKNCVEPLKESLAADAVSVTEQTFEQTELH
SIO_010081: LOC101745292
subclass of: SO_0000673
so part of: LOC101745292
location: complement(join(1129228..1129331,1129788..1130107,1130601..1130782,1135972..1136114,1136752..1136863,1137226..1137398,1139085..1139273,1139846..1139922,1140493..1140683,1141649..1141809,1142662..1142862,1143482..1143670,1143976..1144154,1144243..1144388,1145133..1145267,1145693..1145846,1149543..1149784,1150395..1150559,1151758..1151933,1152506..1152715,1153579..1153657,1154376..1154533,1159727..1159798,1162694..1162810,1163948..1164052,1164726..1164813,1167850..1167852))
location: region:1129228-1167852:-1
so has part: feature:1167850-1167852:-1:exon
so has part: feature:1164726-1164813:-1:exon
so has part: feature:1163948-1164052:-1:exon
so has part: feature:1162694-1162810:-1:exon
so has part: feature:1159727-1159798:-1:exon
so has part: feature:1154376-1154533:-1:exon
so has part: feature:1153579-1153657:-1:exon
so has part: feature:1152506-1152715:-1:exon
so has part: feature:1151758-1151933:-1:exon
so has part: feature:1150395-1150559:-1:exon
so has part: feature:1149543-1149784:-1:exon
so has part: feature:1145693-1145846:-1:exon
so has part: feature:1145133-1145267:-1:exon
so has part: feature:1144243-1144388:-1:exon
so has part: feature:1143976-1144154:-1:exon
so has part: feature:1143482-1143670:-1:exon
so has part: feature:1142662-1142862:-1:exon
so has part: feature:1141649-1141809:-1:exon
so has part: feature:1140493-1140683:-1:exon
so has part: feature:1139846-1139922:-1:exon
so has part: feature:1139085-1139273:-1:exon
so has part: feature:1137226-1137398:-1:exon
so has part: feature:1136752-1136863:-1:exon
so has part: feature:1135972-1136114:-1:exon
so has part: feature:1130601-1130782:-1:exon
so has part: feature:1129788-1130107:-1:exon
so has part: feature:1129228-1129331:-1:exon

XP_037872242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1167850-1167852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164726-1164813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163948-1164052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162694-1162810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159727-1159798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154376-1154533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1153579-1153657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152506-1152715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151758-1151933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1150395-1150559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149543-1149784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1145693-1145846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1145133-1145267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1144243-1144388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143976-1144154:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1143482-1143670:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1142662-1142862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1141649-1141809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1140493-1140683:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1139846-1139922:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1139085-1139273:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1137226-1137398:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1136752-1136863:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1135972-1136114:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1130601-1130782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1129788-1130107:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1129228-1129331:-1:exon

LOC105842601
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC105842601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1131167..1132300
location: region:1131167-1132300:1
so has part: feature:1131167-1132300:1:exon
subclass of: SO_0000011

105842601
type: Gene
SIO_000068: ncbigene

position:1131167:1
position: 1131167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132300:1
position: 1132300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131167-1132300:1:exon

LOC105842601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC105842601
product: uncharacterized LOC105842601
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_001140181.3
SIO_010081: LOC105842601
subclass of: SO_0000673
so part of: LOC105842601
location: join(1131167..1131228,1132225..1132300)
location: region:1131167-1132300:1
so has part: feature:1131167-1131228:1:exon
so has part: feature:1132225-1132300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131167-1131228:1:exon

position:1131228:1
position: 1131228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132225-1132300:1:exon

position:1132225:1
position: 1132225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740014
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1170091..1188519
location: region:1170091-1188519:1
so has part: feature:1170091-1188519:1:exon
subclass of: SO_0000010

101740014
type: Gene
SIO_000068: ncbigene

position:1170091:1
position: 1170091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188519:1
position: 1188519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170091-1188519:1:exon

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_012692688.3
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170091..1170327,1171935..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1188519)
location: region:1170091-1188519:1
so has part: feature:1170091-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170091-1170327:1:exon

position:1170327:1
position: 1170327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

position:1171935:1
position: 1171935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172003:1
position: 1172003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

position:1177689:1
position: 1177689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177779:1
position: 1177779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

position:1178489:1
position: 1178489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178597:1
position: 1178597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

position:1179271:1
position: 1179271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179349:1
position: 1179349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

position:1180010:1
position: 1180010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180107:1
position: 1180107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

position:1181054:1
position: 1181054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181143:1
position: 1181143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

position:1181796:1
position: 1181796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181870:1
position: 1181870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

position:1182748:1
position: 1182748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182854:1
position: 1182854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183800:1:exon

position:1183688:1
position: 1183688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183800:1
position: 1183800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

position:1184674:1
position: 1184674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184818:1
position: 1184818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1188519:1:exon

position:1185625:1
position: 1185625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_012692689.3
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170092..1170327,1171935..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183785,1184674..1184818,1185625..1188519)
location: region:1170092-1188519:1
so has part: feature:1170092-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183785:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

position:1170092:1
position: 1170092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170092-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183785:1:exon

position:1183785:1
position: 1183785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1188519:1:exon

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_012692692.3
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170094..1170327,1171921..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1188519)
location: region:1170094-1188519:1
so has part: feature:1170094-1170327:1:exon
so has part: feature:1171921-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

position:1170094:1
position: 1170094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170094-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171921-1172003:1:exon

position:1171921:1
position: 1171921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1188519:1:exon

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_004928938.2
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170132..1170327,1171935..1172003,1172446..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183785,1184674..1184818,1185625..1188519)
location: region:1170132-1188519:1
so has part: feature:1170132-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1172446-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183785:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

position:1170132:1
position: 1170132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170132-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1172446-1172531:1:exon

position:1172446:1
position: 1172446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172531:1
position: 1172531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183688-1183785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185625-1188519:1:exon

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_012692691.3
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170255..1170327,1171935..1172003,1172446..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1188519)
location: region:1170255-1188519:1
so has part: feature:1170255-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1172446-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

position:1170255:1
position: 1170255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170255-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1172446-1172531:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185625-1188519:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich coiled-coil protein 2 isoform X1
translation: MYSLVGYGSDDDVETERSAPQQSTVAAGSRRREDDTNYDDVNMDMSEDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVTVTPVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170256..1170327,1171935..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1185782)
location: region:1170256-1185782:1
so has part: feature:1170256-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_012548142.1
type: Protein
SIO_000068: ncbiprotein

position:1170256:1
position: 1170256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185782:1
position: 1185782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170256-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1185782:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich coiled-coil protein 2 isoform X2
translation: MYSLVGYGSDDDVETERSAPQQSTVAAGSRRREDDTNYDDVNMDMSEDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1170256..1170327,1171935..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183785,1184674..1184818,1185625..1185782)
location: region:1170256-1185782:1
so has part: feature:1170256-1170327:1:exon
so has part: feature:1171935-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183785:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_012548143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1170256-1170327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171935-1172003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1185782:1:exon

LOC101740014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740014
product: U1 small nuclear ribonucleoprotein 70 kDa, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_038016313.1
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1171921..1172003,1172446..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1188519)
location: region:1171921-1188519:1
so has part: feature:1171921-1172003:1:exon
so has part: feature:1172446-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1188519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1171921-1172003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172446-1172531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185625-1188519:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich coiled-coil protein 2 isoform X5
translation: MDMSEDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVTVTPVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1171989..1172003,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1185782)
location: region:1171989-1185782:1
so has part: feature:1171989-1172003:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_012548146.1
type: Protein
SIO_000068: ncbiprotein

position:1171989:1
position: 1171989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171989-1172003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185625-1185782:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein 70 kDa isoform X3
translation: MSPIVCLVYETSRNDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVTVTPVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1172490..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1185782)
location: region:1172490-1185782:1
so has part: feature:1172490-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_037872241.1
type: Protein
SIO_000068: ncbiprotein

position:1172490:1
position: 1172490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172490-1172531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185625-1185782:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein 70 kDa isoform X3
translation: MSPIVCLVYETSRNDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVTVTPVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1172490..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183800,1184674..1184818,1185625..1185782)
location: region:1172490-1185782:1
so has part: feature:1172490-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183800:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_012548145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1172490-1172531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183688-1183800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185625-1185782:1:exon

LOC101740014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein 70 kDa isoform X4
translation: MSPIVCLVYETSRNDSQGGESEPELPPVEPRSSTNSKREERHSSNESRERARSRDKDRERGRDRDRERARRDGRGERGRDRSERDRRRSRDSSSRRGLLGDKPDDSKVPALMDLKPFGGTSPPGHDLKRSHDARDAASPRFVDRDRRDKDRERERERERDRHSRRSEEKRSSSARHPERRERSRSRGPASSHAPSNSSSERRESVSIPPPNEFRSTSYKVNKKLEVMEKMGLQIKRPDGTMATARELRAGLPADTQASRVLDQVQKRKLLWANKSKADTAEATKWTGTRFAQDADGKQVSKFMRLMGIKEPAAAPPPAAPSKEVDPIKKQEELFQAMQAQYEVARATTHTMRGVGLGFQRGQF
SIO_010081: LOC101740014
subclass of: SO_0000673
so part of: LOC101740014
location: join(1172490..1172531,1177689..1177779,1178489..1178597,1179271..1179349,1180010..1180107,1181054..1181143,1181796..1181870,1182748..1182854,1183688..1183785,1184674..1184818,1185625..1185782)
location: region:1172490-1185782:1
so has part: feature:1172490-1172531:1:exon
so has part: feature:1177689-1177779:1:exon
so has part: feature:1178489-1178597:1:exon
so has part: feature:1179271-1179349:1:exon
so has part: feature:1180010-1180107:1:exon
so has part: feature:1181054-1181143:1:exon
so has part: feature:1181796-1181870:1:exon
so has part: feature:1182748-1182854:1:exon
so has part: feature:1183688-1183785:1:exon
so has part: feature:1184674-1184818:1:exon
so has part: feature:1185625-1185782:1:exon

XP_004928995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1172490-1172531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177689-1177779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178489-1178597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179271-1179349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180010-1180107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181054-1181143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181796-1181870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182748-1182854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183688-1183785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184674-1184818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185625-1185782:1:exon

LOC101739881
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1173293..1174551
location: region:1173293-1174551:1
so has part: feature:1173293-1174551:1:exon
subclass of: SO_0000010

101739881
type: Gene
SIO_000068: ncbigene

position:1173293:1
position: 1173293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174551:1
position: 1174551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173293-1174551:1:exon

LOC101739881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739881
product: succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004928937.4
SIO_010081: LOC101739881
subclass of: SO_0000673
so part of: LOC101739881
location: 1173293..1174551
location: region:1173293-1174551:1
so has part: feature:1173293-1174551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173293-1174551:1:exon

LOC101739881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
translation: MAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGAAAAILEAIEAEMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGNAEELASEYLTQYNTGQKAKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGAMDKIKALEKANVIVTRSPAKMGVELHKEMKRLEII
SIO_010081: LOC101739881
subclass of: SO_0000673
so part of: LOC101739881
location: 1173397..1174392
location: region:1173397-1174392:1
so has part: feature:1173397-1174392:1:exon

XP_004928994.1
type: Protein
SIO_000068: ncbiprotein

position:1173397:1
position: 1173397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174392:1
position: 1174392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173397-1174392:1:exon

LOC105842046
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC105842046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1198975..1202027)
location: region:1198975-1202027:-1
so has part: feature:1198975-1202027:-1:exon
subclass of: SO_0000010

105842046
type: Gene
SIO_000068: ncbigene

position:1198975:-1
position: 1198975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202027:-1
position: 1202027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198975-1202027:-1:exon

LOC105842046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105842046
product: uncharacterized LOC105842046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_012692693.3
SIO_010081: LOC105842046
subclass of: SO_0000673
so part of: LOC105842046
location: complement(join(1198975..1199711,1199923..1200156,1201737..1202027))
location: region:1198975-1202027:-1
so has part: feature:1201737-1202027:-1:exon
so has part: feature:1199923-1200156:-1:exon
so has part: feature:1198975-1199711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1201737-1202027:-1:exon

position:1201737:-1
position: 1201737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1199923-1200156:-1:exon

position:1199923:-1
position: 1199923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200156:-1
position: 1200156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1198975-1199711:-1:exon

position:1199711:-1
position: 1199711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105842046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105842046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105842046
translation: MSLCTNCGIATDRCNTIGRRRLEDEMILSIVQEWVAPQTVNDNDFICQACWKHANAMSLDKSIAEESQRAPSIGHRRVCIHCGRSLLRRVRCHQLRTGEVQERRIHEVIREWILPRTVGASSVICHSCWVQANKASRHFHSGPSTSGASLVVNELNSQDIPHLEELPTTQGTYSAPSAPIIGNLIVLPDYYRAVETESRCFVEGCQGHERNRITLTMRKQLLKMYNYYVPANNRLCDIHLTCTSWNFLSDISDNIINTFSANQIQDMFSLKE
SIO_010081: LOC105842046
subclass of: SO_0000673
so part of: LOC105842046
location: complement(join(1199244..1199711,1199923..1200156,1201737..1201853))
location: region:1199244-1201853:-1
so has part: feature:1201737-1201853:-1:exon
so has part: feature:1199923-1200156:-1:exon
so has part: feature:1199244-1199711:-1:exon

XP_012548147.1
type: Protein
SIO_000068: ncbiprotein

position:1199244:-1
position: 1199244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201853:-1
position: 1201853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201737-1201853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199923-1200156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199244-1199711:-1:exon

Mir2787
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: bmo-mir-2787
gene: Mir2787
gene synonym: bmo-mir-2787
note: microRNA mir-2787; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1199254..1199351
location: region:1199254-1199351:1
so has part: feature:1199254-1199351:1:exon
subclass of: SO_0000571

102464405
type: Gene
SIO_000068: ncbigene

MI0012360
type: miRBase
SIO_000068: mirbase

position:1199254:1
position: 1199254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199351:1
position: 1199351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199254-1199351:1:exon

Mir2787
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 7091
alternative label: bmo-mir-2787
gene: Mir2787
gene synonym: bmo-mir-2787
product: microRNA mir-2787
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_107371.1
SIO_010081: Mir2787
subclass of: SO_0000673
so part of: Mir2787
location: 1199254..1199351
location: region:1199254-1199351:1
so has part: feature:1199254-1199351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199254-1199351:1:exon

Mir2787
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-2787
nc RNA class: miRNA
gene: Mir2787
gene synonym: bmo-mir-2787
product: bmo-miR-2787-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir2787
subclass of: SO_0000673
so part of: Mir2787
location: 1199264..1199288
location: region:1199264-1199288:1
so has part: feature:1199264-1199288:1:exon

MIMAT0013683
type: miRBase
SIO_000068: mirbase

position:1199264:1
position: 1199264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199288:1
position: 1199288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199264-1199288:1:exon

Mir2787
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-2787
nc RNA class: miRNA
gene: Mir2787
gene synonym: bmo-mir-2787
product: bmo-miR-2787-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir2787
subclass of: SO_0000673
so part of: Mir2787
location: 1199318..1199341
location: region:1199318-1199341:1
so has part: feature:1199318-1199341:1:exon

MIMAT0013684
type: miRBase
SIO_000068: mirbase

position:1199318:1
position: 1199318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199341:1
position: 1199341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199318-1199341:1:exon

LOC101739743
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1206804..1221411
location: region:1206804-1221411:1
so has part: feature:1206804-1221411:1:exon
subclass of: SO_0000010

101739743
type: Gene
SIO_000068: ncbigene

position:1206804:1
position: 1206804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221411:1
position: 1221411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206804-1221411:1:exon

LOC101739743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739743
product: verprolin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_004928936.4
SIO_010081: LOC101739743
subclass of: SO_0000673
so part of: LOC101739743
location: join(1206804..1207104,1208368..1208504,1209795..1209885,1210107..1210264,1211427..1211676,1212717..1212871,1215095..1215813,1215884..1215927,1216429..1216546,1217335..1217469,1218670..1221411)
location: region:1206804-1221411:1
so has part: feature:1206804-1207104:1:exon
so has part: feature:1208368-1208504:1:exon
so has part: feature:1209795-1209885:1:exon
so has part: feature:1210107-1210264:1:exon
so has part: feature:1211427-1211676:1:exon
so has part: feature:1212717-1212871:1:exon
so has part: feature:1215095-1215813:1:exon
so has part: feature:1215884-1215927:1:exon
so has part: feature:1216429-1216546:1:exon
so has part: feature:1217335-1217469:1:exon
so has part: feature:1218670-1221411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1206804-1207104:1:exon

position:1207104:1
position: 1207104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208368-1208504:1:exon

position:1208368:1
position: 1208368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208504:1
position: 1208504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1209795-1209885:1:exon

position:1209795:1
position: 1209795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209885:1
position: 1209885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1210107-1210264:1:exon

position:1210107:1
position: 1210107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210264:1
position: 1210264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1211427-1211676:1:exon

position:1211427:1
position: 1211427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211676:1
position: 1211676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1212717-1212871:1:exon

position:1212717:1
position: 1212717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212871:1
position: 1212871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1215095-1215813:1:exon

position:1215095:1
position: 1215095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215813:1
position: 1215813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1215884-1215927:1:exon

position:1215884:1
position: 1215884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215927:1
position: 1215927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1216429-1216546:1:exon

position:1216429:1
position: 1216429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216546:1
position: 1216546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217335-1217469:1:exon

position:1217335:1
position: 1217335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217469:1
position: 1217469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1218670-1221411:1:exon

position:1218670:1
position: 1218670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101739743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: verprolin
translation: MDEEQTKLCPNCKREIPSTNFTIHSVHCARNIGVCPVCKEPVPLADLQKHHDELHKQLPCKQCGDSVCGTDLEDHIRDSCAQTIKTCRFCELELPRRELPPHENYCGVRTEQCPDCREWVMIKYRQLHLDSNHGFIRLDDDPPPASRLLPRLPSTRPSAGPANGAARVSIFDNYVKNINLGTGDCESAGPVPGGSGAKAPFKRKNDQPQINTTVETTNKVWKDLSISRGAVKKRPAPAPPARAAPPPAPPYLCAVQRQQRELADREEQNAINFAAGLPPVSSAAARVDKLRALDALLNRENNNVELRNRDPRPRPPAACAPPAPCAPPGVKNTNSFLSHNISPKHLNFAQTSAPRLEKQLNVSRNTPGPPSGDAGHSGAPLNINPLSAGRGRGPTSNGFASNVPAATHKVSNVTQTIPTAAAGPSCPVPGTARYVPGATSNGSLTIKNTNLTGNDPLEVERRRQEFQDLKPMTPEEFMERFKRFRMRDEENATKGEDRMSEIKSSLRELRRELNEVTAPYNAPPAPPGLGGAAPPSPPRSPPLSPPDDVELPCEFCAAPVPMNQLVLHQTGCRPDLAQLVRRAPVRAEPRRDEPVIPCEFCTESLPVYLISEHQERCGRDADLMYPD
SIO_010081: LOC101739743
subclass of: SO_0000673
so part of: LOC101739743
location: join(1207070..1207104,1208368..1208504,1209795..1209885,1210107..1210264,1211427..1211676,1212717..1212871,1215095..1215813,1215884..1215927,1216429..1216546,1217335..1217469,1218670..1218711)
location: region:1207070-1218711:1
so has part: feature:1207070-1207104:1:exon
so has part: feature:1208368-1208504:1:exon
so has part: feature:1209795-1209885:1:exon
so has part: feature:1210107-1210264:1:exon
so has part: feature:1211427-1211676:1:exon
so has part: feature:1212717-1212871:1:exon
so has part: feature:1215095-1215813:1:exon
so has part: feature:1215884-1215927:1:exon
so has part: feature:1216429-1216546:1:exon
so has part: feature:1217335-1217469:1:exon
so has part: feature:1218670-1218711:1:exon

XP_004928993.2
type: Protein
SIO_000068: ncbiprotein

position:1207070:1
position: 1207070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218711:1
position: 1218711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207070-1207104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208368-1208504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1209795-1209885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210107-1210264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211427-1211676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212717-1212871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215095-1215813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215884-1215927:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1216429-1216546:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1217335-1217469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1218670-1218711:1:exon

LOC119629741
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629741
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1217839..1217995
location: region:1217839-1217995:1
so has part: feature:1217839-1217995:1:exon
subclass of: SO_0000623

119629741
type: Gene
SIO_000068: ncbigene

position:1217839:1
position: 1217839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217995:1
position: 1217995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217839-1217995:1:exon

LOC119629741
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: snRNA
gene: LOC119629741
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005245643.1
SIO_010081: LOC119629741
subclass of: SO_0000673
so part of: LOC119629741
location: 1217839..1217995
location: region:1217839-1217995:1
so has part: feature:1217839-1217995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217839-1217995:1:exon

LOC101739604
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1224004..1240596)
location: region:1224004-1240596:-1
so has part: feature:1224004-1240596:-1:exon
subclass of: SO_0000010

101739604
type: Gene
SIO_000068: ncbigene

position:1224004:-1
position: 1224004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240596:-1
position: 1240596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224004-1240596:-1:exon

LOC101739604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739604
product: uncharacterized LOC101739604, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_021349737.2
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(join(1224004..1224627,1240445..1240596))
location: region:1224004-1240596:-1
so has part: feature:1240445-1240596:-1:exon
so has part: feature:1224004-1224627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240445-1240596:-1:exon

position:1240445:-1
position: 1240445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224004-1224627:-1:exon

position:1224627:-1
position: 1224627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101739604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739604
product: uncharacterized LOC101739604, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_012692694.3
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(join(1224004..1224627,1233493..1233679))
location: region:1224004-1233679:-1
so has part: feature:1233493-1233679:-1:exon
so has part: feature:1224004-1224627:-1:exon

position:1233679:-1
position: 1233679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233493-1233679:-1:exon

position:1233493:-1
position: 1233493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224004-1224627:-1:exon

LOC101739604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739604
product: uncharacterized LOC101739604, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021349736.2
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(join(1224004..1224627,1228771..1228889,1229783..1229933,1233493..1233677))
location: region:1224004-1233677:-1
so has part: feature:1233493-1233677:-1:exon
so has part: feature:1229783-1229933:-1:exon
so has part: feature:1228771-1228889:-1:exon
so has part: feature:1224004-1224627:-1:exon

position:1233677:-1
position: 1233677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233493-1233677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1229783-1229933:-1:exon

position:1229783:-1
position: 1229783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229933:-1
position: 1229933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228771-1228889:-1:exon

position:1228771:-1
position: 1228771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228889:-1
position: 1228889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1224004-1224627:-1:exon

LOC101739604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739604
product: uncharacterized LOC101739604, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038016511.1
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(join(1224004..1224627,1228771..1229610))
location: region:1224004-1229610:-1
so has part: feature:1228771-1229610:-1:exon
so has part: feature:1224004-1224627:-1:exon

position:1229610:-1
position: 1229610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228771-1229610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224004-1224627:-1:exon

LOC101739604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101739604 isoform X1
translation: MYRYLLPLLFLMSATPAPQSKADITYFKLQPVIKQSDLQQTESRIENLPLTIPGNASINNVSISQSTTAASIPAETTAAVTVTDVKSDVDSRGAQSNQTDRRVKEEHDLTTADYETTLAQSDITEKYVDLIDVEPVKHVSKFVALSKFGGRTTNHIETSGKRRFRSRCRCEKIWNCPKLQISVPRCPEEQFLCCF
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(join(1224048..1224627,1233493..1233500))
location: region:1224048-1233500:-1
so has part: feature:1233493-1233500:-1:exon
so has part: feature:1224048-1224627:-1:exon

XP_012548148.1
type: Protein
SIO_000068: ncbiprotein

position:1224048:-1
position: 1224048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233500:-1
position: 1233500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233493-1233500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224048-1224627:-1:exon

LOC101739604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101739604 isoform X2
translation: MSATPAPQSKADITYFKLQPVIKQSDLQQTESRIENLPLTIPGNASINNVSISQSTTAASIPAETTAAVTVTDVKSDVDSRGAQSNQTDRRVKEEHDLTTADYETTLAQSDITEKYVDLIDVEPVKHVSKFVALSKFGGRTTNHIETSGKRRFRSRCRCEKIWNCPKLQISVPRCPEEQFLCCF
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(1224048..1224602)
location: region:1224048-1224602:-1
so has part: feature:1224048-1224602:-1:exon

XP_021205411.1
type: Protein
SIO_000068: ncbiprotein

position:1224602:-1
position: 1224602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224048-1224602:-1:exon

LOC101739604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101739604 isoform X2
translation: MSATPAPQSKADITYFKLQPVIKQSDLQQTESRIENLPLTIPGNASINNVSISQSTTAASIPAETTAAVTVTDVKSDVDSRGAQSNQTDRRVKEEHDLTTADYETTLAQSDITEKYVDLIDVEPVKHVSKFVALSKFGGRTTNHIETSGKRRFRSRCRCEKIWNCPKLQISVPRCPEEQFLCCF
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(1224048..1224602)
location: region:1224048-1224602:-1
so has part: feature:1224048-1224602:-1:exon

XP_021205412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1224048-1224602:-1:exon

LOC101739604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101739604 isoform X2
translation: MSATPAPQSKADITYFKLQPVIKQSDLQQTESRIENLPLTIPGNASINNVSISQSTTAASIPAETTAAVTVTDVKSDVDSRGAQSNQTDRRVKEEHDLTTADYETTLAQSDITEKYVDLIDVEPVKHVSKFVALSKFGGRTTNHIETSGKRRFRSRCRCEKIWNCPKLQISVPRCPEEQFLCCF
SIO_010081: LOC101739604
subclass of: SO_0000673
so part of: LOC101739604
location: complement(1224048..1224602)
location: region:1224048-1224602:-1
so has part: feature:1224048-1224602:-1:exon

XP_037872439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1224048-1224602:-1:exon

Mir745
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: bmo-mir-745
gene: Mir745
gene synonym: bmo-mir-745
note: microRNA mir-745; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1239480..1239558)
location: region:1239480-1239558:-1
so has part: feature:1239480-1239558:-1:exon
subclass of: SO_0000571

102464377
type: Gene
SIO_000068: ncbigene

MI0012310
type: miRBase
SIO_000068: mirbase

position:1239480:-1
position: 1239480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239558:-1
position: 1239558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239480-1239558:-1:exon

Mir745
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 7091
alternative label: bmo-mir-745
gene: Mir745
gene synonym: bmo-mir-745
product: microRNA mir-745
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_107325.1
SIO_010081: Mir745
subclass of: SO_0000673
so part of: Mir745
location: complement(1239480..1239558)
location: region:1239480-1239558:-1
so has part: feature:1239480-1239558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239480-1239558:-1:exon

Mir745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-745
nc RNA class: miRNA
gene: Mir745
gene synonym: bmo-mir-745
product: bmo-miR-745-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir745
subclass of: SO_0000673
so part of: Mir745
location: complement(1239490..1239512)
location: region:1239490-1239512:-1
so has part: feature:1239490-1239512:-1:exon

MIMAT0013626
type: miRBase
SIO_000068: mirbase

position:1239490:-1
position: 1239490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239512:-1
position: 1239512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239490-1239512:-1:exon

Mir745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-745
nc RNA class: miRNA
gene: Mir745
gene synonym: bmo-mir-745
product: bmo-miR-745-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir745
subclass of: SO_0000673
so part of: Mir745
location: complement(1239525..1239548)
location: region:1239525-1239548:-1
so has part: feature:1239525-1239548:-1:exon

MIMAT0013625
type: miRBase
SIO_000068: mirbase

position:1239525:-1
position: 1239525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239548:-1
position: 1239548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239525-1239548:-1:exon

LOC101739463
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1252223..1265254)
location: region:1252223-1265254:-1
so has part: feature:1252223-1265254:-1:exon
subclass of: SO_0000010

101739463
type: Gene
SIO_000068: ncbigene

position:1252223:-1
position: 1252223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265254:-1
position: 1265254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252223-1265254:-1:exon

LOC101739463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739463
product: TBC1 domain family member 22B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_004928934.4
SIO_010081: LOC101739463
subclass of: SO_0000673
so part of: LOC101739463
location: complement(join(1252223..1253528,1260911..1261177,1261705..1261917,1264526..1265254))
location: region:1252223-1265254:-1
so has part: feature:1264526-1265254:-1:exon
so has part: feature:1261705-1261917:-1:exon
so has part: feature:1260911-1261177:-1:exon
so has part: feature:1252223-1253528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264526-1265254:-1:exon

position:1264526:-1
position: 1264526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261705-1261917:-1:exon

position:1261705:-1
position: 1261705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261917:-1
position: 1261917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1260911-1261177:-1:exon

position:1260911:-1
position: 1260911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261177:-1
position: 1261177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1252223-1253528:-1:exon

position:1253528:-1
position: 1253528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101739463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 22B
translation: MENHEPEHDKGLLSDTFWRTPQRAVPGRPYQRVIPNEVMSGSSYQQFQASVNDAWDLGDDEIISGIADTKISKSISETAALNVINSHRNSTKNVNRSDVKVESEVKSKEVVEVKKNEGRKVGGGSGIRQYPGRPRPVRLSALASREESSESKLERFQQIHDSTVVNLDELKQISWSGIPVKARAVTWRLLAGYLPANSERRADTLQRKRADYKHLVRQYYDAERDDDTYRQIHIDIPRMSPLVALFQQNTVQVMFERILYIWAIRHPASGYVQGINDLVTPFFMVFLQEAVPGEELDNYPLDKLTEEKRDIIEADSFWCLSKFLDSVQDNYIFAQLGIQYKVNQLKELIRRIDLPLHEHLQQHGVDYLQFSFRWMNNLLTREIPLACTIRLWDTYLAESDEFATFQLYVCAAFLLHWRERLMLERDFQGLMILLQNVPTQNWTDSNISVLVAEAYRLKFAFADAPKHLQSGKADR
SIO_010081: LOC101739463
subclass of: SO_0000673
so part of: LOC101739463
location: complement(join(1253124..1253528,1260911..1261177,1261705..1261917,1264526..1265068))
location: region:1253124-1265068:-1
so has part: feature:1264526-1265068:-1:exon
so has part: feature:1261705-1261917:-1:exon
so has part: feature:1260911-1261177:-1:exon
so has part: feature:1253124-1253528:-1:exon

XP_004928991.1
type: Protein
SIO_000068: ncbiprotein

position:1253124:-1
position: 1253124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265068:-1
position: 1265068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264526-1265068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261705-1261917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260911-1261177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253124-1253528:-1:exon

LOC101739318
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1265312..1281865
location: region:1265312-1281865:1
so has part: feature:1265312-1281865:1:exon
subclass of: SO_0000010

101739318
type: Gene
SIO_000068: ncbigene

position:1265312:1
position: 1265312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281865:1
position: 1281865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265312-1281865:1:exon

LOC101739318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739318
product: uncharacterized protein KIAA1841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_012692687.3
SIO_010081: LOC101739318
subclass of: SO_0000673
so part of: LOC101739318
location: join(1265312..1266187,1266259..1266350,1266421..1266568,1266640..1266730,1267050..1267209,1267890..1268003,1269327..1269433,1270402..1270566,1271802..1271903,1272858..1272999,1273723..1273854,1274609..1274756,1275269..1275400,1276607..1276707,1279037..1279203,1280732..1280889,1281700..1281865)
location: region:1265312-1281865:1
so has part: feature:1265312-1266187:1:exon
so has part: feature:1266259-1266350:1:exon
so has part: feature:1266421-1266568:1:exon
so has part: feature:1266640-1266730:1:exon
so has part: feature:1267050-1267209:1:exon
so has part: feature:1267890-1268003:1:exon
so has part: feature:1269327-1269433:1:exon
so has part: feature:1270402-1270566:1:exon
so has part: feature:1271802-1271903:1:exon
so has part: feature:1272858-1272999:1:exon
so has part: feature:1273723-1273854:1:exon
so has part: feature:1274609-1274756:1:exon
so has part: feature:1275269-1275400:1:exon
so has part: feature:1276607-1276707:1:exon
so has part: feature:1279037-1279203:1:exon
so has part: feature:1280732-1280889:1:exon
so has part: feature:1281700-1281865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265312-1266187:1:exon

position:1266187:1
position: 1266187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266259-1266350:1:exon

position:1266259:1
position: 1266259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266350:1
position: 1266350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1266421-1266568:1:exon

position:1266421:1
position: 1266421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266568:1
position: 1266568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1266640-1266730:1:exon

position:1266640:1
position: 1266640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266730:1
position: 1266730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1267050-1267209:1:exon

position:1267050:1
position: 1267050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267209:1
position: 1267209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1267890-1268003:1:exon

position:1267890:1
position: 1267890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268003:1
position: 1268003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1269327-1269433:1:exon

position:1269327:1
position: 1269327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269433:1
position: 1269433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1270402-1270566:1:exon

position:1270402:1
position: 1270402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270566:1
position: 1270566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1271802-1271903:1:exon

position:1271802:1
position: 1271802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271903:1
position: 1271903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1272858-1272999:1:exon

position:1272858:1
position: 1272858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272999:1
position: 1272999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1273723-1273854:1:exon

position:1273723:1
position: 1273723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273854:1
position: 1273854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1274609-1274756:1:exon

position:1274609:1
position: 1274609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274756:1
position: 1274756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1275269-1275400:1:exon

position:1275269:1
position: 1275269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275400:1
position: 1275400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1276607-1276707:1:exon

position:1276607:1
position: 1276607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276707:1
position: 1276707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1279037-1279203:1:exon

position:1279037:1
position: 1279037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279203:1
position: 1279203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1280732-1280889:1:exon

position:1280732:1
position: 1280732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280889:1
position: 1280889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1281700-1281865:1:exon

position:1281700:1
position: 1281700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101739318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1841
translation: MASPNPEIDLSSMFISKVNNSKSPTRSEPTSRRNSTVKSSLPAEIITVKDFFDFMKTAYQVYEYLEGDEDDGSKIDWEELTKLTVLNHVIEQQERDLLLQTAFSEQKPITSKSETALERKNSEFERLEKRFSCSEIEGKSRRRSIPQEARVEMLGVWTEANLNCKLNDVINEGILDSILPYLVGYKKPSKTTSVYVPVIKKTPSNPTTDVKKPASFGGFINEKDSRDRLGRRKSSVIAAQDRANHKQDGDVEIHVCDEVKGLKKDFRCPQKLLVSKMGYFADVTAGQRLEDMDISVHCDIQIFDWLMRWMKKDSILVADWPLLDPHNVVPILVSASFLQMEPLLHDCLIYCHAHMNDIVKTTTNLACLSDALLTRLAAMYTNAELEAIKDRKDKIQSRLYCKMIMSLAEPVPETLRGHYSTLATLFKCTKCNKLLGRHIAELVPCQPASMRIDRRGNVVAAHTKDANWSLNEYISWLYGELRSWRRVYWRLWADCHFLLCQLCDNYFPAYQMEWCSHHEQPPHMFSLEGRPPLPAGRYPCCGERAYRFETITRNTGCQFREHVPDERMASDAAVMELYNQFRDIIAMKPPQLMFPERLTRLVGRESGDDNSGRLQCKEVFWWEGIQLVTPRPPLGLLGKLYTSNTKFNAHMRPASPVVSGVSPAPAPRPPKPPKDPRPEVKEKGAPGRGGSGDDGEEDSSSSSSDSEQSSASGRSDEDSATRKTGRVVRVQHPHPVVKRARVVGRQWMSCASARSNQDGQRRFEERAARQMRAALARRQPLTNNKAKPPPGGVYARLEAEWREKHGQRPRNAAPARPRHATNSKYKPAA
SIO_010081: LOC101739318
subclass of: SO_0000673
so part of: LOC101739318
location: join(1265776..1266187,1266259..1266350,1266421..1266568,1266640..1266730,1267050..1267209,1267890..1268003,1269327..1269433,1270402..1270566,1271802..1271903,1272858..1272999,1273723..1273854,1274609..1274756,1275269..1275400,1276607..1276707,1279037..1279203,1280732..1280889,1281700..1281818)
location: region:1265776-1281818:1
so has part: feature:1265776-1266187:1:exon
so has part: feature:1266259-1266350:1:exon
so has part: feature:1266421-1266568:1:exon
so has part: feature:1266640-1266730:1:exon
so has part: feature:1267050-1267209:1:exon
so has part: feature:1267890-1268003:1:exon
so has part: feature:1269327-1269433:1:exon
so has part: feature:1270402-1270566:1:exon
so has part: feature:1271802-1271903:1:exon
so has part: feature:1272858-1272999:1:exon
so has part: feature:1273723-1273854:1:exon
so has part: feature:1274609-1274756:1:exon
so has part: feature:1275269-1275400:1:exon
so has part: feature:1276607-1276707:1:exon
so has part: feature:1279037-1279203:1:exon
so has part: feature:1280732-1280889:1:exon
so has part: feature:1281700-1281818:1:exon

XP_012548141.3
type: Protein
SIO_000068: ncbiprotein

position:1265776:1
position: 1265776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281818:1
position: 1281818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265776-1266187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266259-1266350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266421-1266568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1266640-1266730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267050-1267209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267890-1268003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269327-1269433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270402-1270566:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271802-1271903:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272858-1272999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273723-1273854:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1274609-1274756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275269-1275400:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1276607-1276707:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1279037-1279203:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1280732-1280889:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1281700-1281818:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1266954..1267025
location: region:1266954-1267025:1
so has part: feature:1266954-1267025:1:exon
subclass of: SO_0000663

110385697
type: Gene
SIO_000068: ncbigene

position:1266954:1
position: 1266954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267025:1
position: 1267025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266954-1267025:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7091
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1266987..1266989,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 1266954..1267025
location: region:1266954-1267025:1
so has part: feature:1266954-1267025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266954-1267025:1:exon

RpL6
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: RpL6
note: ribosomal protein L6; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1283500..1288183)
location: region:1283500-1288183:-1
so has part: feature:1283500-1288183:-1:exon
subclass of: SO_0000010

692660
type: Gene
SIO_000068: ncbigene

position:1283500:-1
position: 1283500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288183:-1
position: 1288183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283500-1288183:-1:exon

RpL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: RpL6
product: ribosomal protein L6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 371 ESTs, 41 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_012692616.2
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283500..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769,1288027..1288183))
location: region:1283500-1288183:-1
so has part: feature:1288027-1288183:-1:exon
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283500-1283693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288027-1288183:-1:exon

position:1288027:-1
position: 1288027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287620-1287769:-1:exon

position:1287620:-1
position: 1287620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287769:-1
position: 1287769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1286903-1287054:-1:exon

position:1286903:-1
position: 1286903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287054:-1
position: 1287054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1285658-1285829:-1:exon

position:1285658:-1
position: 1285658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285829:-1
position: 1285829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284723-1284908:-1:exon

position:1284723:-1
position: 1284723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284908:-1
position: 1284908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1283500-1283693:-1:exon

position:1283693:-1
position: 1283693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RpL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: RpL6
product: ribosomal protein L6
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001043667.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001043667.1
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283500..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769,1288136..1288144))
location: region:1283500-1288144:-1
so has part: feature:1288136-1288144:-1:exon
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283500-1283693:-1:exon

position:1288144:-1
position: 1288144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288136-1288144:-1:exon

position:1288136:-1
position: 1288136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283500-1283693:-1:exon

RpL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: RpL6
product: ribosomal protein L6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 343 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_012692617.1
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283500..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769,1288002..1288117))
location: region:1283500-1288117:-1
so has part: feature:1288002-1288117:-1:exon
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283500-1283693:-1:exon

position:1288117:-1
position: 1288117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288002-1288117:-1:exon

position:1288002:-1
position: 1288002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283500-1283693:-1:exon

RpL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: RpL6
product: ribosomal protein L6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 341 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_021349696.2
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283500..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769,1287920..1287935))
location: region:1283500-1287935:-1
so has part: feature:1287920-1287935:-1:exon
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283500-1283693:-1:exon

position:1287935:-1
position: 1287935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287920-1287935:-1:exon

position:1287920:-1
position: 1287920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283500-1283693:-1:exon

RpL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: RpL6
inference: similar to AA sequence (same species):RefSeq:NP_001037132.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ribosomal protein L6
translation: MAPTQPKAAAKPAAAPAGALTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283532..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769))
location: region:1283532-1287769:-1
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283532-1283693:-1:exon

NP_001037132.1
type: Protein
SIO_000068: ncbiprotein

position:1283532:-1
position: 1283532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283532-1283693:-1:exon

RpL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: RpL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein L6 isoform X1
translation: MAPTQPKAAAKPAAAPAGAVTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283532..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769))
location: region:1283532-1287769:-1
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283532-1283693:-1:exon

XP_021205371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283532-1283693:-1:exon

RpL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: RpL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein L6 isoform X1
translation: MAPTQPKAAAKPAAAPAGAVTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283532..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769))
location: region:1283532-1287769:-1
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283532-1283693:-1:exon

XP_012548070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283532-1283693:-1:exon

RpL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: RpL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein L6 isoform X1
translation: MAPTQPKAAAKPAAAPAGAVTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF
SIO_010081: RpL6
subclass of: SO_0000673
so part of: RpL6
location: complement(join(1283532..1283693,1284723..1284908,1285658..1285829,1286903..1287054,1287620..1287769))
location: region:1283532-1287769:-1
so has part: feature:1287620-1287769:-1:exon
so has part: feature:1286903-1287054:-1:exon
so has part: feature:1285658-1285829:-1:exon
so has part: feature:1284723-1284908:-1:exon
so has part: feature:1283532-1283693:-1:exon

XP_012548071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287620-1287769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286903-1287054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285658-1285829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284723-1284908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283532-1283693:-1:exon

LOC101739181
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1288302..1316843
location: region:1288302-1316843:1
so has part: feature:1288302-1316843:1:exon
subclass of: SO_0000010

101739181
type: Gene
SIO_000068: ncbigene

position:1288302:1
position: 1288302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316843:1
position: 1316843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288302-1316843:1:exon

LOC101739181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739181
product: two pore calcium channel protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_004928932.4
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1288302..1288587,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316843)
location: region:1288302-1316843:1
so has part: feature:1288302-1288587:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288302-1288587:1:exon

position:1288587:1
position: 1288587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

position:1305292:1
position: 1305292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305431:1
position: 1305431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

position:1305539:1
position: 1305539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305703:1
position: 1305703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

position:1306002:1
position: 1306002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306127:1
position: 1306127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

position:1307020:1
position: 1307020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307200:1
position: 1307200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

position:1307622:1
position: 1307622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307754:1
position: 1307754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

position:1307998:1
position: 1307998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308097:1
position: 1308097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

position:1308425:1
position: 1308425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308605:1
position: 1308605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

position:1309236:1
position: 1309236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309448:1
position: 1309448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

position:1310100:1
position: 1310100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310219:1
position: 1310219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

position:1311212:1
position: 1311212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311380:1
position: 1311380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

position:1312377:1
position: 1312377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312547:1
position: 1312547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

position:1313340:1
position: 1313340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313535:1
position: 1313535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

position:1314199:1
position: 1314199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314304:1
position: 1314304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

position:1315336:1
position: 1315336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315442:1
position: 1315442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

position:1315882:1
position: 1315882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315990:1
position: 1315990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316843:1:exon

position:1316620:1
position: 1316620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101739181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739181
product: two pore calcium channel protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038016601.1
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1288426..1288631,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316843)
location: region:1288426-1316843:1
so has part: feature:1288426-1288631:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316843:1:exon

position:1288426:1
position: 1288426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288426-1288631:1:exon

position:1288631:1
position: 1288631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316843:1:exon

LOC101739181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: two pore calcium channel protein 1 isoform X1
translation: MSRNKFIWNVKRIQFAKMASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSNSRTGTDGGGDSSTLDMGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVYAVIVCNGVSLVWRLCQINENLQTSAQLLCASWDTWLFLTLFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGVTLFELTVVNNWFILMNAYASVAGQFTRIYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRLGAAGTLADTLRQHLPPGVEVTFIGSRPRTKEVLQRRMYQSEIQKWLAEEDENEGVPPSTTITSSEDPLSPPLIHQPDSEDNHQPRPAYQL
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1288434..1288587,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316732)
location: region:1288434-1316732:1
so has part: feature:1288434-1288587:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316732:1:exon

XP_004928989.3
type: Protein
SIO_000068: ncbiprotein

position:1288434:1
position: 1288434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316732:1
position: 1316732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288434-1288587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316732:1:exon

LOC101739181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739181
product: two pore calcium channel protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_038016599.1
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1295142..1295576,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316843)
location: region:1295142-1316843:1
so has part: feature:1295142-1295576:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316843:1:exon

position:1295142:1
position: 1295142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295142-1295576:1:exon

position:1295576:1
position: 1295576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316843:1:exon

LOC101739181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: two pore calcium channel protein 1 isoform X2
translation: MAKVVKYSDRLYYTLREQWCRLKAYSRTGTDGGGDSSTLDMGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVYAVIVCNGVSLVWRLCQINENLQTSAQLLCASWDTWLFLTLFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGVTLFELTVVNNWFILMNAYASVAGQFTRIYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRLGAAGTLADTLRQHLPPGVEVTFIGSRPRTKEVLQRRMYQSEIQKWLAEEDENEGVPPSTTITSSEDPLSPPLIHQPDSEDNHQPRPAYQL
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1295504..1295576,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316732)
location: region:1295504-1316732:1
so has part: feature:1295504-1295576:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316732:1:exon

XP_037872527.1
type: Protein
SIO_000068: ncbiprotein

position:1295504:1
position: 1295504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295504-1295576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316732:1:exon

LOC101739181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739181
product: two pore calcium channel protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038016602.1
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1302489..1303141,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316843)
location: region:1302489-1316843:1
so has part: feature:1302489-1303141:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316843:1:exon

position:1302489:1
position: 1302489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302489-1303141:1:exon

position:1303141:1
position: 1303141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316843:1:exon

LOC101739181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101739181
product: two pore calcium channel protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038016600.1
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1303491..1303649,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316843)
location: region:1303491-1316843:1
so has part: feature:1303491-1303649:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316843:1:exon

position:1303491:1
position: 1303491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303491-1303649:1:exon

position:1303649:1
position: 1303649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316843:1:exon

LOC101739181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: two pore calcium channel protein 1 isoform X3
translation: MDIVGSAAVIDSRTGTDGGGDSSTLDMGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVYAVIVCNGVSLVWRLCQINENLQTSAQLLCASWDTWLFLTLFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGVTLFELTVVNNWFILMNAYASVAGQFTRIYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRLGAAGTLADTLRQHLPPGVEVTFIGSRPRTKEVLQRRMYQSEIQKWLAEEDENEGVPPSTTITSSEDPLSPPLIHQPDSEDNHQPRPAYQL
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1303619..1303649,1305292..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316732)
location: region:1303619-1316732:1
so has part: feature:1303619-1303649:1:exon
so has part: feature:1305292-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316732:1:exon

XP_037872528.1
type: Protein
SIO_000068: ncbiprotein

position:1303619:1
position: 1303619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303619-1303649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305292-1305431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316620-1316732:1:exon

LOC101739181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: two pore calcium channel protein 1 isoform X4
translation: MGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVYAVIVCNGVSLVWRLCQINENLQTSAQLLCASWDTWLFLTLFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGVTLFELTVVNNWFILMNAYASVAGQFTRIYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRLGAAGTLADTLRQHLPPGVEVTFIGSRPRTKEVLQRRMYQSEIQKWLAEEDENEGVPPSTTITSSEDPLSPPLIHQPDSEDNHQPRPAYQL
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1305339..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316732)
location: region:1305339-1316732:1
so has part: feature:1305339-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316732:1:exon

XP_037872529.1
type: Protein
SIO_000068: ncbiprotein

position:1305339:1
position: 1305339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305339-1305431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316620-1316732:1:exon

LOC101739181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101739181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: two pore calcium channel protein 1 isoform X4
translation: MGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVYAVIVCNGVSLVWRLCQINENLQTSAQLLCASWDTWLFLTLFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGVTLFELTVVNNWFILMNAYASVAGQFTRIYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRLGAAGTLADTLRQHLPPGVEVTFIGSRPRTKEVLQRRMYQSEIQKWLAEEDENEGVPPSTTITSSEDPLSPPLIHQPDSEDNHQPRPAYQL
SIO_010081: LOC101739181
subclass of: SO_0000673
so part of: LOC101739181
location: join(1305339..1305431,1305539..1305703,1306002..1306127,1307020..1307200,1307622..1307754,1307998..1308097,1308425..1308605,1309236..1309448,1310100..1310219,1311212..1311380,1312377..1312547,1313340..1313535,1314199..1314304,1315336..1315442,1315882..1315990,1316620..1316732)
location: region:1305339-1316732:1
so has part: feature:1305339-1305431:1:exon
so has part: feature:1305539-1305703:1:exon
so has part: feature:1306002-1306127:1:exon
so has part: feature:1307020-1307200:1:exon
so has part: feature:1307622-1307754:1:exon
so has part: feature:1307998-1308097:1:exon
so has part: feature:1308425-1308605:1:exon
so has part: feature:1309236-1309448:1:exon
so has part: feature:1310100-1310219:1:exon
so has part: feature:1311212-1311380:1:exon
so has part: feature:1312377-1312547:1:exon
so has part: feature:1313340-1313535:1:exon
so has part: feature:1314199-1314304:1:exon
so has part: feature:1315336-1315442:1:exon
so has part: feature:1315882-1315990:1:exon
so has part: feature:1316620-1316732:1:exon

XP_037872530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305339-1305431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305539-1305703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306002-1306127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307020-1307200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307622-1307754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307998-1308097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1308425-1308605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1309236-1309448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1310100-1310219:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1311212-1311380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312377-1312547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313340-1313535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314199-1314304:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1315336-1315442:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315882-1315990:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316620-1316732:1:exon

Mk
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
note: mevalonate kinase; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1339298..1411525)
location: region:1339298-1411525:-1
so has part: feature:1339298-1411525:-1:exon
subclass of: SO_0000010

100101205
type: Gene
SIO_000068: ncbigene

position:1339298:-1
position: 1339298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411525:-1
position: 1411525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339298-1411525:-1:exon

Mk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
product: mevalonate kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 106 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_012692593.3
SIO_010081: Mk
subclass of: SO_0000673
so part of: Mk
location: complement(join(1339298..1341643,1343118..1343245,1343974..1344039,1345111..1345340,1347800..1348343,1349601..1349944,1360176..1360270,1411144..1411525))
location: region:1339298-1411525:-1
so has part: feature:1411144-1411525:-1:exon
so has part: feature:1360176-1360270:-1:exon
so has part: feature:1349601-1349944:-1:exon
so has part: feature:1347800-1348343:-1:exon
so has part: feature:1345111-1345340:-1:exon
so has part: feature:1343974-1344039:-1:exon
so has part: feature:1343118-1343245:-1:exon
so has part: feature:1339298-1341643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1411144-1411525:-1:exon

position:1411144:-1
position: 1411144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1360176-1360270:-1:exon

position:1360176:-1
position: 1360176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360270:-1
position: 1360270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1349601-1349944:-1:exon

position:1349601:-1
position: 1349601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349944:-1
position: 1349944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1347800-1348343:-1:exon

position:1347800:-1
position: 1347800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348343:-1
position: 1348343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1345111-1345340:-1:exon

position:1345111:-1
position: 1345111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345340:-1
position: 1345340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1343974-1344039:-1:exon

position:1343974:-1
position: 1343974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344039:-1
position: 1344039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1343118-1343245:-1:exon

position:1343118:-1
position: 1343118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343245:-1
position: 1343245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1339298-1341643:-1:exon

position:1341643:-1
position: 1341643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
product: mevalonate kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 103 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_038016176.1
SIO_010081: Mk
subclass of: SO_0000673
so part of: Mk
location: complement(join(1339298..1341643,1343118..1343245,1343974..1344039,1345111..1345340,1347800..1348343,1349601..1349944,1360176..1360270,1379256..1379406))
location: region:1339298-1379406:-1
so has part: feature:1379256-1379406:-1:exon
so has part: feature:1360176-1360270:-1:exon
so has part: feature:1349601-1349944:-1:exon
so has part: feature:1347800-1348343:-1:exon
so has part: feature:1345111-1345340:-1:exon
so has part: feature:1343974-1344039:-1:exon
so has part: feature:1343118-1343245:-1:exon
so has part: feature:1339298-1341643:-1:exon

position:1379406:-1
position: 1379406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379256-1379406:-1:exon

position:1379256:-1
position: 1379256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1360176-1360270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349601-1349944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347800-1348343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345111-1345340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343974-1344039:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343118-1343245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1339298-1341643:-1:exon

Mk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
product: mevalonate kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 114 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_012692594.3
SIO_010081: Mk
subclass of: SO_0000673
so part of: Mk
location: complement(join(1339298..1341643,1343118..1343245,1343974..1344039,1345111..1345340,1347800..1348343,1349601..1349944,1360176..1360270,1372539..1372668))
location: region:1339298-1372668:-1
so has part: feature:1372539-1372668:-1:exon
so has part: feature:1360176-1360270:-1:exon
so has part: feature:1349601-1349944:-1:exon
so has part: feature:1347800-1348343:-1:exon
so has part: feature:1345111-1345340:-1:exon
so has part: feature:1343974-1344039:-1:exon
so has part: feature:1343118-1343245:-1:exon
so has part: feature:1339298-1341643:-1:exon

position:1372668:-1
position: 1372668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372539-1372668:-1:exon

position:1372539:-1
position: 1372539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1360176-1360270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349601-1349944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347800-1348343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345111-1345340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343974-1344039:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343118-1343245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1339298-1341643:-1:exon

Mk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
product: mevalonate kinase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001099829.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 15 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001099829.1
SIO_010081: Mk
subclass of: SO_0000673
so part of: Mk
location: complement(join(1341460..1341643,1343118..1343245,1343974..1344039,1345111..1345340,1347800..1348343,1349601..1349920))
location: region:1341460-1349920:-1
so has part: feature:1349601-1349920:-1:exon
so has part: feature:1347800-1348343:-1:exon
so has part: feature:1345111-1345340:-1:exon
so has part: feature:1343974-1344039:-1:exon
so has part: feature:1343118-1343245:-1:exon
so has part: feature:1341460-1341643:-1:exon

position:1341460:-1
position: 1341460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349920:-1
position: 1349920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349601-1349920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347800-1348343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345111-1345340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1343974-1344039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1343118-1343245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341460-1341643:-1:exon

Mk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: Mk_bm
gene: Mk
gene synonym: Mk_bm
inference: similar to AA sequence (same species):RefSeq:NP_001093299.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: mevalonate kinase
translation: MLTAVDNLFTVSVSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPLEPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSSSGNFDAYYDQSSQDFTDTEKEIISEWAFNCEKIMHGTPSGIDNATCTFGNLVSFKKGAKPRHLDIRMELRVLLVDSRVSRETRTLVVRVAALRQRNTAAVDHIMEACEHVAHTATQVLEKLSSGKCDPDTEADYQHLSELWDMNHCLLSALGVSHPSLEVIRAAAKSKGLACKLTGAGGGGYAMILIPPSTPRSAIDSLSGQLLQNGFRVTETRLGGPGVSIEM
SIO_010081: Mk
subclass of: SO_0000673
so part of: Mk
location: complement(join(1341511..1341643,1343118..1343245,1343974..1344039,1345111..1345340,1347800..1348343,1349601..1349741))
location: region:1341511-1349741:-1
so has part: feature:1349601-1349741:-1:exon
so has part: feature:1347800-1348343:-1:exon
so has part: feature:1345111-1345340:-1:exon
so has part: feature:1343974-1344039:-1:exon
so has part: feature:1343118-1343245:-1:exon
so has part: feature:1341511-1341643:-1:exon