Bombyx mori strain p50T chromosome 12, Bmori_2016v1.0, whole genome shotgun sequence.
type: Entry
definition: Bombyx mori strain p50T chromosome 12, Bmori_2016v1.0, whole genome shotgun sequence.
sequence version: NC_051369.1
sequence date: 2020-12-02
sequence: sequence
division: CON
label: NC_051369.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA679031
dblink: SAMD00054089
keyword: WGS
keyword: RefSeq
source: Bombyx mori (domestic silkworm)
organism: Bombyx mori
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nBHWX01000012.1.\nAssembly name: Bmori_2016v1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Graduate School of\nAgricultural and Life Sciences, The University of Tokyo on\n2020/10/13. The original whole-genome shotgun project has the\naccession BHWX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Graduate School of Agricultural and Life\n Sciences, The University of Tokyo\nAssembly Method :: HGAP v. 3\nAssembly Name :: Bmori_2016v1.0\nGenome Coverage :: 140x\nSequencing Technology :: PacBio RS II; Illumina HiSeq 2500\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bombyx mori Annotation Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 17580608
topology: linear
so has quality: SO_0000987
location: 1..17580608
location: region:1-17580608:1
RO_0002162: 7091

NC_051369
type: RefSeq
SIO_000068: refseq

PRJNA679031
type: BioProject
SIO_000068: bioproject

SAMD00054089
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17580608:1
position: 17580608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17580608:1:source
so part of: sequence
organism: Bombyx mori
mol type: genomic DNA
strain: p50T
chromosome: 12

7091
type: Taxonomy
SIO_000068: taxonomy

LOC119629232
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8001..9422
location: region:8001-9422:1
so has part: feature:8001-9422:1:exon
subclass of: SO_0000010

119629232
type: Gene
SIO_000068: ncbigene

position:8001:1
position: 8001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9422:1
position: 9422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8001-9422:1:exon

LOC119629232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629232
product: uncharacterized LOC119629232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038014401.1
SIO_010081: LOC119629232
subclass of: SO_0000673
so part of: LOC119629232
location: 8001..9422
location: region:8001-9422:1
so has part: feature:8001-9422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8001-9422:1:exon

LOC119629232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629232
translation: MGGIDIAMSREIKLLGVTIDDRLTFNTHVANVCRKATGIYKLLSRAARVSWGLNPDIVRIIYTATIEPIILYAASVWAPAAKKLMTIKQLQVVQRGIAQKICKGYRTVSLNSALLLAGILPLDLRVREAASLYEAKRGVPRLELGDREIERVAPAIEAPHPAERISLRLVSLVDREQLNQNSDFEIRIFTDGSRIEGKVGAALSVWNSETEIKAFKLALPGYCTVYQAELLAICKATHVILGHPASSFGVYSDSMAALQTVINHSCLHPLAVESRDKLTTASLQGKVVTLFWIKAHAGMEGNERADQLAKSAALGSKRRPDYDLYPVSFAKRSIRLATLDEWNRRYRTGETASVTKIFFPDAVMAYRMIRKIKIGGIITQIMTGHGGFSEYLNRFKCKESPSCACEPGTEESVPHILFDCPIPAMQRFELGNKINENIVRENVPNILNSKERDTFLKFCIEIAQNVINRNKTA
SIO_010081: LOC119629232
subclass of: SO_0000673
so part of: LOC119629232
location: 8001..9422
location: region:8001-9422:1
so has part: feature:8001-9422:1:exon

XP_037870329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8001-9422:1:exon

LOC119629233
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28234..28896)
location: region:28234-28896:-1
so has part: feature:28234-28896:-1:exon
subclass of: SO_0000010

119629233
type: Gene
SIO_000068: ncbigene

position:28234:-1
position: 28234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28896:-1
position: 28896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28234-28896:-1:exon

LOC119629233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629233
product: uncharacterized LOC119629233
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038014402.1
SIO_010081: LOC119629233
subclass of: SO_0000673
so part of: LOC119629233
location: complement(28234..28896)
location: region:28234-28896:-1
so has part: feature:28234-28896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28234-28896:-1:exon

LOC119629233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629233
translation: MSRIDEKLIPIIEENKSLKLKIEAQQKEIEYLKREKRNNNIIIFGVEEKEKTTLELMDMIKKTFKNDINIDIEENAINNLYRLGKRSIQGNKPRPVCCSFVNGWKKNEIVKNKKYLKEIYVTEDYPKNVLAKRKVLQAELIEERKKGKIAYLKYDKLIVKEMDTTNEKRKKETSSSPHSSDFQPKKQQATVPSKANRANAFDVMRMRSNSLTNVLTNKQQ
SIO_010081: LOC119629233
subclass of: SO_0000673
so part of: LOC119629233
location: complement(28234..28896)
location: region:28234-28896:-1
so has part: feature:28234-28896:-1:exon

XP_037870330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28234-28896:-1:exon

LOC110386479
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110386479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31675..33084
location: region:31675-33084:1
so has part: feature:31675-33084:1:exon
subclass of: SO_0000010

110386479
type: Gene
SIO_000068: ncbigene

position:31675:1
position: 31675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33084:1
position: 33084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31675-33084:1:exon

LOC110386479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110386479
product: uncharacterized LOC110386479
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038014404.1
SIO_010081: LOC110386479
subclass of: SO_0000673
so part of: LOC110386479
location: 31675..33084
location: region:31675-33084:1
so has part: feature:31675-33084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31675-33084:1:exon

LOC110386479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110386479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110386479
translation: MTILGLTYDRNLNFRPHLERITGKALNIYKAIAQAAKATWGLNPDIIRIIYTAVIEPIMLYAASSWAITTNREYIRRKLDNLSRIFAIKISKAHRTASYTSVLLLGRILPLDLRIAEAAELYKIKNGSPIPMLPGRPIEKRTSIYRLPHPACRDDLHFKILQTQEELIEVTNKTPTIYTDGSKLEGRVGGAATWWEQGEERKSKSFRLNPYNSVFQAEIVAIQEALMMIAKSQHKVVNIISDSRSGLQAIINTNTTHPLIFNIQTTMRNLASMNKTANLFWIKAHAGIPGNERADEIAKKAALTNKQAPKYDGVPLSYVRHTLRQTTIDKWQQRYTEATTGMTTKMFFVDVRRAHKILSKMKVNNIIAQLLTGHGGFGEYLFRFKLKSNPYCECDGGVCETVLHILTECPRFGFRRMETEQILDFAMDTQNFPSIIEDDSAREAFLKFAINSIKIANNRNNSIMKYAID
SIO_010081: LOC110386479
subclass of: SO_0000673
so part of: LOC110386479
location: 31675..33084
location: region:31675-33084:1
so has part: feature:31675-33084:1:exon

XP_037870332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31675-33084:1:exon

LOC119629262
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<33940..>34872)
location: region:33940-34872:-1
so has part: feature:33940-34872:-1:exon
subclass of: SO_0000010

119629262
type: Gene
SIO_000068: ncbigene

position:33940:-1
position: 33940
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:34872:-1
position: 34872
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33940-34872:-1:exon

LOC119629262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629262
product: uncharacterized LOC119629262
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038014464.1
SIO_010081: LOC119629262
subclass of: SO_0000673
so part of: LOC119629262
location: complement(<33940..>34872)
location: region:33940-34872:-1
so has part: feature:33940-34872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33940-34872:-1:exon

LOC119629262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629262
translation: GVRVGVGVTGLRYLGLELDGRWNFRAHFAKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHALTRQNVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPGEGVVRARRLQSRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGGLTFRLTQMLTGHGCFGRYLFKIAGREPTAQCHHCADRDEDDTAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDFCESTISQKEAAERERESSSLSAPIRR
SIO_010081: LOC119629262
subclass of: SO_0000673
so part of: LOC119629262
location: complement(<33940..>34872)
location: region:33940-34872:-1
so has part: feature:33940-34872:-1:exon

XP_037870392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33940-34872:-1:exon

LOC119629234
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 53416..>57225
location: region:53416-57225:1
so has part: feature:53416-57225:1:exon
subclass of: SO_0000010

119629234
type: Gene
SIO_000068: ncbigene

position:53416:1
position: 53416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57225:1
position: 57225
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53416-57225:1:exon

LOC119629234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629234
product: uncharacterized LOC119629234
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014405.1
SIO_010081: LOC119629234
subclass of: SO_0000673
so part of: LOC119629234
location: join(53416..53511,56293..>57225)
location: region:53416-57225:1
so has part: feature:53416-53511:1:exon
so has part: feature:56293-57225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53416-53511:1:exon

position:53511:1
position: 53511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56293-57225:1:exon

position:56293:1
position: 56293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119629234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629234
translation: MAEVKITGLDECATKEEVAAAIASQGNCALADGVRVGVGVTGLRYLGLELDGRWNFRAHFAKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHALTRKNVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAANYRWRSDLRSRGEGRPGEGVVRARRLQSRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTAQCHHCADRDEEDTAEHALARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSEASWKAMLDFCESTISQKEAAERERESSSLSAPIRR
SIO_010081: LOC119629234
subclass of: SO_0000673
so part of: LOC119629234
location: join(53416..53511,56293..>57225)
location: region:53416-57225:1
so has part: feature:53416-53511:1:exon
so has part: feature:56293-57225:1:exon

XP_037870333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53416-53511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56293-57225:1:exon

LOC101744018
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64536..85459)
location: region:64536-85459:-1
so has part: feature:64536-85459:-1:exon
subclass of: SO_0000010

101744018
type: Gene
SIO_000068: ncbigene

position:64536:-1
position: 64536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85459:-1
position: 85459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64536-85459:-1:exon

LOC101744018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744018
product: syntaxin-1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014406.1
SIO_010081: LOC101744018
subclass of: SO_0000673
so part of: LOC101744018
location: complement(join(64536..65582,65657..65905,65988..66061,73886..74146,74723..74816,75982..76074,77707..77837,85360..85459))
location: region:64536-85459:-1
so has part: feature:85360-85459:-1:exon
so has part: feature:77707-77837:-1:exon
so has part: feature:75982-76074:-1:exon
so has part: feature:74723-74816:-1:exon
so has part: feature:73886-74146:-1:exon
so has part: feature:65988-66061:-1:exon
so has part: feature:65657-65905:-1:exon
so has part: feature:64536-65582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85360-85459:-1:exon

position:85360:-1
position: 85360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77707-77837:-1:exon

position:77707:-1
position: 77707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77837:-1
position: 77837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75982-76074:-1:exon

position:75982:-1
position: 75982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76074:-1
position: 76074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74723-74816:-1:exon

position:74723:-1
position: 74723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74816:-1
position: 74816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73886-74146:-1:exon

position:73886:-1
position: 73886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74146:-1
position: 74146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65988-66061:-1:exon

position:65988:-1
position: 65988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66061:-1
position: 66061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65657-65905:-1:exon

position:65657:-1
position: 65657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65905:-1
position: 65905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:64536-65582:-1:exon

position:65582:-1
position: 65582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1A
translation: MMVRWLTVEAGFRHAWPTSRRCDLDRAIAVKVFTNIRQESGARYQCIAVPTGTEPPVHAPPQRDDMAVRDRLAELQHVSAGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRRLYSDPTYHTNRQLQEQLDRAVTQSNALGLKVCGALRQFETRVAGGGAGGGGGGTLWRIARLQYAATRRLYGDALDQHRRALDAVRDHQLLLLHQQIKLTNLAISDEECQSLLDSNNISLFVDNVRAETAAARLELRAVEARREELARVEAALREVRELFQQLAALVAAQQDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARKKKMSLLLCLAIGFLIVLLVLLLT
SIO_010081: LOC101744018
subclass of: SO_0000673
so part of: LOC101744018
location: complement(join(65511..65582,65657..65905,65988..66061,73886..74146,74723..74816,75982..76074,77707..77837,85360..85459))
location: region:65511-85459:-1
so has part: feature:85360-85459:-1:exon
so has part: feature:77707-77837:-1:exon
so has part: feature:75982-76074:-1:exon
so has part: feature:74723-74816:-1:exon
so has part: feature:73886-74146:-1:exon
so has part: feature:65988-66061:-1:exon
so has part: feature:65657-65905:-1:exon
so has part: feature:65511-65582:-1:exon

XP_037870334.1
type: Protein
SIO_000068: ncbiprotein

position:65511:-1
position: 65511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85360-85459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77707-77837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75982-76074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74723-74816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73886-74146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65988-66061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65657-65905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65511-65582:-1:exon

LOC110385571
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66735..73879)
location: region:66735-73879:-1
so has part: feature:66735-73879:-1:exon
subclass of: SO_0000011

110385571
type: Gene
SIO_000068: ncbigene

position:66735:-1
position: 66735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73879:-1
position: 73879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66735-73879:-1:exon

LOC110385571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385571
product: uncharacterized LOC110385571
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_002430829.2
SIO_010081: LOC110385571
subclass of: SO_0000673
so part of: LOC110385571
location: complement(join(66735..66901,72612..73879))
location: region:66735-73879:-1
so has part: feature:72612-73879:-1:exon
so has part: feature:66735-66901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72612-73879:-1:exon

position:72612:-1
position: 72612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66735-66901:-1:exon

position:66901:-1
position: 66901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mir3354
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: bmo-mir-3354
gene: Mir3354
gene synonym: bmo-mir-3354
note: microRNA mir-3354; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(71925..72021)
location: region:71925-72021:-1
so has part: feature:71925-72021:-1:exon
subclass of: SO_0000571

102464590
type: Gene
SIO_000068: ncbigene

MI0014414
type: miRBase
SIO_000068: mirbase

position:71925:-1
position: 71925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72021:-1
position: 72021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71925-72021:-1:exon

Mir3354
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 7091
alternative label: bmo-mir-3354
gene: Mir3354
gene synonym: bmo-mir-3354
product: microRNA mir-3354
inference: similar to RNA sequence (same species):RefSeq:NR_107632.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_107632.1
SIO_010081: Mir3354
subclass of: SO_0000673
so part of: Mir3354
location: complement(71925..72021)
location: region:71925-72021:-1
so has part: feature:71925-72021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71925-72021:-1:exon

Mir3354
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-3354
nc RNA class: miRNA
gene: Mir3354
gene synonym: bmo-mir-3354
product: bmo-miR-3354
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir3354
subclass of: SO_0000673
so part of: Mir3354
location: complement(71930..71953)
location: region:71930-71953:-1
so has part: feature:71930-71953:-1:exon

MIMAT0015540
type: miRBase
SIO_000068: mirbase

position:71930:-1
position: 71930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71953:-1
position: 71953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71930-71953:-1:exon

LOC105841868
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC105841868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 77831..95042
location: region:77831-95042:1
so has part: feature:77831-95042:1:exon
subclass of: SO_0000010

105841868
type: Gene
SIO_000068: ncbigene

position:77831:1
position: 77831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95042:1
position: 95042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77831-95042:1:exon

LOC105841868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105841868
product: uncharacterized LOC105841868, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038014319.1
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(77831..78036,86501..87236,87330..87483,93037..93117,94938..95042)
location: region:77831-95042:1
so has part: feature:77831-78036:1:exon
so has part: feature:86501-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93117:1:exon
so has part: feature:94938-95042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77831-78036:1:exon

position:78036:1
position: 78036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86501-87236:1:exon

position:86501:1
position: 86501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87236:1
position: 87236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87330-87483:1:exon

position:87330:1
position: 87330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87483:1
position: 87483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93037-93117:1:exon

position:93037:1
position: 93037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93117:1
position: 93117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94938-95042:1:exon

position:94938:1
position: 94938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105841868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105841868
product: uncharacterized LOC105841868, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021348938.2
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(86158..87236,87330..87483,93037..93117,94938..95042)
location: region:86158-95042:1
so has part: feature:86158-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93117:1:exon
so has part: feature:94938-95042:1:exon

position:86158:1
position: 86158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86158-87236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87330-87483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93037-93117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94938-95042:1:exon

LOC105841868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC105841868
product: uncharacterized LOC105841868, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012691580.3
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(86158..87065,87156..87236,87330..87483,93037..93117,94938..95042)
location: region:86158-95042:1
so has part: feature:86158-87065:1:exon
so has part: feature:87156-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93117:1:exon
so has part: feature:94938-95042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86158-87065:1:exon

position:87065:1
position: 87065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87156-87236:1:exon

position:87156:1
position: 87156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87330-87483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93037-93117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94938-95042:1:exon

LOC105841868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105841868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105841868 isoform X1
translation: MTRFEFSQRTKTKSVSKTLNILFNCIYVLTCMDFGFSLGVYKRMKVLENISLVLRVMVAIMCAAMVMKQDILDSAWADITLTESLLVIVSFKLSKPKLSYRELLENLSIVDETQGAPPAGYKVERKLITYIAGVTALRLTVLCLYCVAHTEQYSIDNFIEFLYNVPCYCLDLYLIVHFIIFHSIYCRLRTLRKALSNNFDVYRAHLIYKTLIDCTEEIKKCLDIPVSRSDRHRHSLHKPMGTFLKSYRTPRVMFQLVVILIATILVVMVNVLVTLRMLFKGESIISAFLLRYIEVILSLALLFVPVLVADMMALEAHKIHIFLHGRMQTANDLVRHESPGDRDNGHDQRAENSAADS
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(86391..87236,87330..87483,93037..93110)
location: region:86391-93110:1
so has part: feature:86391-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93110:1:exon

XP_021204613.1
type: Protein
SIO_000068: ncbiprotein

position:86391:1
position: 86391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93110:1
position: 93110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86391-87236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87330-87483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93037-93110:1:exon

LOC105841868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105841868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105841868 isoform X2
translation: MTRFEFSQRTKTKSVSKTLNILFNCIYVLTCMDFGFSLGVYKRMKVLENISLVLRVMVAIMCAAMVMKQDILDSAWADITLTESLLVIVSFKLSKPKLSYRELLENLSIVDETQGAPPAGYKVERKLITYIAGVTALRLTVLCLYCVAHTEQYSIDNFIEFLYNVPCYCLDLYLIVHFIIFHSIYCRLRTLRKALSNNFDVYRAHLIYKTLIDCTEEIKKCLDIPLVVILIATILVVMVNVLVTLRMLFKGESIISAFLLRYIEVILSLALLFVPVLVADMMALEAHKIHIFLHGRMQTANDLVRHESPGDRDNGHDQRAENSAADS
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(86391..87065,87156..87236,87330..87483,93037..93110)
location: region:86391-93110:1
so has part: feature:86391-87065:1:exon
so has part: feature:87156-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93110:1:exon

XP_012547034.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86391-87065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87156-87236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87330-87483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93037-93110:1:exon

LOC105841868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC105841868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105841868 isoform X3
translation: MKVLENISLVLRVMVAIMCAAMVMKQDILDSAWADITLTESLLVIVSFKLSKPKLSYRELLENLSIVDETQGAPPAGYKVERKLITYIAGVTALRLTVLCLYCVAHTEQYSIDNFIEFLYNVPCYCLDLYLIVHFIIFHSIYCRLRTLRKALSNNFDVYRAHLIYKTLIDCTEEIKKCLDIPVSRSDRHRHSLHKPMGTFLKSYRTPRVMFQLVVILIATILVVMVNVLVTLRMLFKGESIISAFLLRYIEVILSLALLFVPVLVADMMALEAHKIHIFLHGRMQTANDLVRHESPGDRDNGHDQRAENSAADS
SIO_010081: LOC105841868
subclass of: SO_0000673
so part of: LOC105841868
location: join(86520..87236,87330..87483,93037..93110)
location: region:86520-93110:1
so has part: feature:86520-87236:1:exon
so has part: feature:87330-87483:1:exon
so has part: feature:93037-93110:1:exon

XP_037870247.1
type: Protein
SIO_000068: ncbiprotein

position:86520:1
position: 86520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86520-87236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87330-87483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93037-93110:1:exon

LOC101740681
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115068..123367
location: region:115068-123367:1
so has part: feature:115068-123367:1:exon
subclass of: SO_0000010

101740681
type: Gene
SIO_000068: ncbigene

position:115068:1
position: 115068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123367:1
position: 123367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115068-123367:1:exon

LOC101740681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740681
product: proton-coupled folate transporter, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_004927564.4
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115068..115270,115471..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123367)
location: region:115068-123367:1
so has part: feature:115068-115270:1:exon
so has part: feature:115471-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115068-115270:1:exon

position:115270:1
position: 115270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115471-115649:1:exon

position:115471:1
position: 115471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115649:1
position: 115649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116245-116505:1:exon

position:116245:1
position: 116245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116505:1
position: 116505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117534-117705:1:exon

position:117534:1
position: 117534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117705:1
position: 117705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120066-120243:1:exon

position:120066:1
position: 120066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120243:1
position: 120243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121953-122331:1:exon

position:121953:1
position: 121953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122331:1
position: 122331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122561-122801:1:exon

position:122561:1
position: 122561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122801:1
position: 122801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:123136-123367:1:exon

position:123136:1
position: 123136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740681
product: proton-coupled folate transporter, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_038014605.1
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115068..115270,115507..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123367)
location: region:115068-123367:1
so has part: feature:115068-115270:1:exon
so has part: feature:115507-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115068-115270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115507-115649:1:exon

position:115507:1
position: 115507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116245-116505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117534-117705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120066-120243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121953-122331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122561-122801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123136-123367:1:exon

LOC101740681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740681
product: proton-coupled folate transporter, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038014606.1
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115068..115270,115548..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123367)
location: region:115068-123367:1
so has part: feature:115068-115270:1:exon
so has part: feature:115548-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115068-115270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115548-115649:1:exon

position:115548:1
position: 115548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116245-116505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117534-117705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120066-120243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121953-122331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122561-122801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123136-123367:1:exon

LOC101740681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-coupled folate transporter isoform X1
translation: MLDETVVPESESDVMVRRARRPGSTIELSFFMTTLGLSLTGVAISNLILYRTCVHVLRHGRAECSSFLAVDKTNDTQYLEKEVQRYAIFVNSTKSVLESLAPAVLSLFLGSWSDRHGRKPLIVWPLFGIATTSMLVLIYSMVDVGPWWFILTSVPYSLAGGVATLSTGSYSYMSDVTSTEKRTARMFTVQLAASGGVVAGSLLSAPVLRAVGAVYLLLAGASVAAFTYAFTNVFLNESLTGVVQGSMTSIMDLQLVTDMSRECFRRRPNNGRAQVLVVAAASSLSAFVTFGIMNLEYLYTREKLHWTLSEFTVYSAVNTLLSFFGGLIGMSVLQGLFKISDLPLAAVAFVSAAAEYVAKTLAVDSWHMYLGASLAIFKGLSASLLRSFVSKVLPADVVTKFLALMSAVESLCPLLAPLVYSTLYGATVSTAPASVYVLSTGIIVFCIVLIGVVLYFRRHATTPYEVLQPEPF
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115529..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123202)
location: region:115529-123202:1
so has part: feature:115529-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123202:1:exon

XP_037870533.1
type: Protein
SIO_000068: ncbiprotein

position:115529:1
position: 115529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123202:1
position: 123202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115529-115649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116245-116505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117534-117705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120066-120243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121953-122331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122561-122801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123136-123202:1:exon

LOC101740681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-coupled folate transporter isoform X1
translation: MLDETVVPESESDVMVRRARRPGSTIELSFFMTTLGLSLTGVAISNLILYRTCVHVLRHGRAECSSFLAVDKTNDTQYLEKEVQRYAIFVNSTKSVLESLAPAVLSLFLGSWSDRHGRKPLIVWPLFGIATTSMLVLIYSMVDVGPWWFILTSVPYSLAGGVATLSTGSYSYMSDVTSTEKRTARMFTVQLAASGGVVAGSLLSAPVLRAVGAVYLLLAGASVAAFTYAFTNVFLNESLTGVVQGSMTSIMDLQLVTDMSRECFRRRPNNGRAQVLVVAAASSLSAFVTFGIMNLEYLYTREKLHWTLSEFTVYSAVNTLLSFFGGLIGMSVLQGLFKISDLPLAAVAFVSAAAEYVAKTLAVDSWHMYLGASLAIFKGLSASLLRSFVSKVLPADVVTKFLALMSAVESLCPLLAPLVYSTLYGATVSTAPASVYVLSTGIIVFCIVLIGVVLYFRRHATTPYEVLQPEPF
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115529..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123202)
location: region:115529-123202:1
so has part: feature:115529-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123202:1:exon

XP_004927621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115529-115649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116245-116505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117534-117705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120066-120243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121953-122331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122561-122801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123136-123202:1:exon

LOC101740681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-coupled folate transporter isoform X2
translation: MVRRARRPGSTIELSFFMTTLGLSLTGVAISNLILYRTCVHVLRHGRAECSSFLAVDKTNDTQYLEKEVQRYAIFVNSTKSVLESLAPAVLSLFLGSWSDRHGRKPLIVWPLFGIATTSMLVLIYSMVDVGPWWFILTSVPYSLAGGVATLSTGSYSYMSDVTSTEKRTARMFTVQLAASGGVVAGSLLSAPVLRAVGAVYLLLAGASVAAFTYAFTNVFLNESLTGVVQGSMTSIMDLQLVTDMSRECFRRRPNNGRAQVLVVAAASSLSAFVTFGIMNLEYLYTREKLHWTLSEFTVYSAVNTLLSFFGGLIGMSVLQGLFKISDLPLAAVAFVSAAAEYVAKTLAVDSWHMYLGASLAIFKGLSASLLRSFVSKVLPADVVTKFLALMSAVESLCPLLAPLVYSTLYGATVSTAPASVYVLSTGIIVFCIVLIGVVLYFRRHATTPYEVLQPEPF
SIO_010081: LOC101740681
subclass of: SO_0000673
so part of: LOC101740681
location: join(115571..115649,116245..116505,117534..117705,120066..120243,121953..122331,122561..122801,123136..123202)
location: region:115571-123202:1
so has part: feature:115571-115649:1:exon
so has part: feature:116245-116505:1:exon
so has part: feature:117534-117705:1:exon
so has part: feature:120066-120243:1:exon
so has part: feature:121953-122331:1:exon
so has part: feature:122561-122801:1:exon
so has part: feature:123136-123202:1:exon

XP_037870534.1
type: Protein
SIO_000068: ncbiprotein

position:115571:1
position: 115571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115571-115649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116245-116505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117534-117705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120066-120243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121953-122331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122561-122801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123136-123202:1:exon

LOC101740413
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134425..142779
location: region:134425-142779:1
so has part: feature:134425-142779:1:exon
subclass of: SO_0000010

101740413
type: Gene
SIO_000068: ncbigene

position:134425:1
position: 134425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142779:1
position: 142779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134425-142779:1:exon

LOC101740413
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740413
product: serine protease snake
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_038014327.1
SIO_010081: LOC101740413
subclass of: SO_0000673
so part of: LOC101740413
location: join(134425..134590,135007..135104,135752..135819,136004..136065,137231..137397,137478..137590,137678..137830,139615..139753,142370..142501,142577..142779)
location: region:134425-142779:1
so has part: feature:134425-134590:1:exon
so has part: feature:135007-135104:1:exon
so has part: feature:135752-135819:1:exon
so has part: feature:136004-136065:1:exon
so has part: feature:137231-137397:1:exon
so has part: feature:137478-137590:1:exon
so has part: feature:137678-137830:1:exon
so has part: feature:139615-139753:1:exon
so has part: feature:142370-142501:1:exon
so has part: feature:142577-142779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134425-134590:1:exon

position:134590:1
position: 134590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135007-135104:1:exon

position:135007:1
position: 135007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135104:1
position: 135104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135752-135819:1:exon

position:135752:1
position: 135752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135819:1
position: 135819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136004-136065:1:exon

position:136004:1
position: 136004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136065:1
position: 136065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137231-137397:1:exon

position:137231:1
position: 137231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137397:1
position: 137397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137478-137590:1:exon

position:137478:1
position: 137478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137590:1
position: 137590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:137678-137830:1:exon

position:137678:1
position: 137678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137830:1
position: 137830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:139615-139753:1:exon

position:139615:1
position: 139615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139753:1
position: 139753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:142370-142501:1:exon

position:142370:1
position: 142370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142501:1
position: 142501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:142577-142779:1:exon

position:142577:1
position: 142577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740413
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease snake
translation: MSRDALVSCALLCAVLCALLPARHGAAAADVEGTPCVRGRFNGTCVLSKRCETLILDYRDRSFPPVCGLRGKEPIVCCTDCELVDNIDNIYLTRRYSRLEKTNKKSWDACIDYVLNIPEYFCTSTVTFNFNKAWDSEKKCHKISITAQSPVGGEDAKRAEFPFMALLGFGASAEEAQWLCGGSVLSARYILTAAHCISEPRLGPLKYAALGILKRSDPPEIWQRHTLAQVIPHPDYASPSKYHDIALLKTEKQIIFNVNVVPACLYSGVNSKRIDPTRALALGWGYLGPRERLADVLQKVEVSEFTTEECLTQYPEHRHLLDGFDNSTQMCYGDRDTPHDTCEGDSGGPLILHESEAGCARAVFGVTSSGVACGDAGAGLYTRVEPYKPWIESIVWP
SIO_010081: LOC101740413
subclass of: SO_0000673
so part of: LOC101740413
location: join(134494..134590,135007..135104,135752..135819,136004..136065,137231..137397,137478..137590,137678..137830,139615..139753,142370..142501,142577..142741)
location: region:134494-142741:1
so has part: feature:134494-134590:1:exon
so has part: feature:135007-135104:1:exon
so has part: feature:135752-135819:1:exon
so has part: feature:136004-136065:1:exon
so has part: feature:137231-137397:1:exon
so has part: feature:137478-137590:1:exon
so has part: feature:137678-137830:1:exon
so has part: feature:139615-139753:1:exon
so has part: feature:142370-142501:1:exon
so has part: feature:142577-142741:1:exon

XP_037870255.1
type: Protein
SIO_000068: ncbiprotein

position:134494:1
position: 134494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142741:1
position: 142741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134494-134590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135007-135104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135752-135819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136004-136065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137231-137397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137478-137590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137678-137830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139615-139753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142370-142501:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142577-142741:1:exon

LOC101740284
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145261..153796)
location: region:145261-153796:-1
so has part: feature:145261-153796:-1:exon
subclass of: SO_0000010

101740284
type: Gene
SIO_000068: ncbigene

position:145261:-1
position: 145261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153796:-1
position: 153796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145261-153796:-1:exon

LOC101740284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740284
product: uncharacterized LOC101740284
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004927562.1
SIO_010081: LOC101740284
subclass of: SO_0000673
so part of: LOC101740284
location: complement(join(145261..146644,148387..148540,153759..153796))
location: region:145261-153796:-1
so has part: feature:153759-153796:-1:exon
so has part: feature:148387-148540:-1:exon
so has part: feature:145261-146644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153759-153796:-1:exon

position:153759:-1
position: 153759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148387-148540:-1:exon

position:148387:-1
position: 148387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148540:-1
position: 148540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145261-146644:-1:exon

position:146644:-1
position: 146644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101740284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101740284
translation: MKLITAAPRYLETVLLFSAAFAPVLAADMMASEAQKIKVTLNNILQRDDSLLEDDRRKVKQFAGYVSARPFRLRACRVLSLDCTLPVTVLSICVTYLIVVVQFMHLY
SIO_010081: LOC101740284
subclass of: SO_0000673
so part of: LOC101740284
location: complement(join(146475..146644,148387..148540))
location: region:146475-148540:-1
so has part: feature:148387-148540:-1:exon
so has part: feature:146475-146644:-1:exon

XP_004927619.1
type: Protein
SIO_000068: ncbiprotein

position:146475:-1
position: 146475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148387-148540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146475-146644:-1:exon

LOC101744509
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161008..203585
location: region:161008-203585:1
so has part: feature:161008-203585:1:exon
subclass of: SO_0000010

101744509
type: Gene
SIO_000068: ncbigene

position:161008:1
position: 161008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203585:1
position: 203585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161008-203585:1:exon

LOC101744509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744509
product: serine protease snake
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_038014329.1
SIO_010081: LOC101744509
subclass of: SO_0000673
so part of: LOC101744509
location: join(161008..161147,186039..186136,191363..191430,191516..191577,197541..197707,197788..197900,197988..198140,201016..201154,203134..203265,203341..203585)
location: region:161008-203585:1
so has part: feature:161008-161147:1:exon
so has part: feature:186039-186136:1:exon
so has part: feature:191363-191430:1:exon
so has part: feature:191516-191577:1:exon
so has part: feature:197541-197707:1:exon
so has part: feature:197788-197900:1:exon
so has part: feature:197988-198140:1:exon
so has part: feature:201016-201154:1:exon
so has part: feature:203134-203265:1:exon
so has part: feature:203341-203585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161008-161147:1:exon

position:161147:1
position: 161147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186039-186136:1:exon

position:186039:1
position: 186039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186136:1
position: 186136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191363-191430:1:exon

position:191363:1
position: 191363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191430:1
position: 191430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191516-191577:1:exon

position:191516:1
position: 191516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191577:1
position: 191577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197541-197707:1:exon

position:197541:1
position: 197541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197707:1
position: 197707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:197788-197900:1:exon

position:197788:1
position: 197788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197900:1
position: 197900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197988-198140:1:exon

position:197988:1
position: 197988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198140:1
position: 198140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:201016-201154:1:exon

position:201016:1
position: 201016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201154:1
position: 201154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:203134-203265:1:exon

position:203134:1
position: 203134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203265:1
position: 203265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:203341-203585:1:exon

position:203341:1
position: 203341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101744509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease snake
translation: MSRVTLVSCVLLLLALGTSAADIEGSPCQRDGYNGTCVLAKHCETLILDYKEQNYPPVCGLRGKEPIVCCTDCDLVDNIENIYLSRQHSRLEKTNEKSWDACIDNALYIPDYHCKSTVSYGFHKQYNPERKCHSIVSSAWSPVGGEDAERAEFPFMALLGFGPSAEEAQWLCGGSVLSARYILTAAHCISEPRLGPLKYAALGILKRSDPPEIWQRHTLAQVIPHPDYASPSKYHDIALLKTEKQIEFNVNVVPACLYSGQISPYINKTRALALGWGYLGPRKRLADVLQKVEVSEFTAEECLKQYPPHRHLLDGFDNSTQLCFGDRDTPHDTCQGDSGGPLILHESEAGCTRAVLGVTSSGVACGDAGAGLYTRIEHYKPWIVSIVWP
SIO_010081: LOC101744509
subclass of: SO_0000673
so part of: LOC101744509
location: join(161075..161147,186039..186136,191363..191430,191516..191577,197541..197707,197788..197900,197988..198140,201016..201154,203134..203265,203341..203505)
location: region:161075-203505:1
so has part: feature:161075-161147:1:exon
so has part: feature:186039-186136:1:exon
so has part: feature:191363-191430:1:exon
so has part: feature:191516-191577:1:exon
so has part: feature:197541-197707:1:exon
so has part: feature:197788-197900:1:exon
so has part: feature:197988-198140:1:exon
so has part: feature:201016-201154:1:exon
so has part: feature:203134-203265:1:exon
so has part: feature:203341-203505:1:exon

XP_037870257.1
type: Protein
SIO_000068: ncbiprotein

position:161075:1
position: 161075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203505:1
position: 203505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161075-161147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186039-186136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191363-191430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191516-191577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197541-197707:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197788-197900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197988-198140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201016-201154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203134-203265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203341-203505:1:exon

LOC119629225
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211690..214731)
location: region:211690-214731:-1
so has part: feature:211690-214731:-1:exon
subclass of: SO_0000010

119629225
type: Gene
SIO_000068: ncbigene

position:211690:-1
position: 211690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214731:-1
position: 214731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211690-214731:-1:exon

LOC119629225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629225
product: uncharacterized LOC119629225
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038014334.1
SIO_010081: LOC119629225
subclass of: SO_0000673
so part of: LOC119629225
location: complement(join(211690..212250,213483..214731))
location: region:211690-214731:-1
so has part: feature:213483-214731:-1:exon
so has part: feature:211690-212250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213483-214731:-1:exon

position:213483:-1
position: 213483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211690-212250:-1:exon

position:212250:-1
position: 212250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629225
translation: MKFIRTAPRYLETVLLFSSAFAPVLAADMMASEAQKIKVTLNNILQRDDSLLEDDRRKVKQFAGYVSARPFRLRACRVLSLDCTLPVTVLSICVTYLIVVVQFTHLY
SIO_010081: LOC119629225
subclass of: SO_0000673
so part of: LOC119629225
location: complement(join(212081..212250,213483..213636))
location: region:212081-213636:-1
so has part: feature:213483-213636:-1:exon
so has part: feature:212081-212250:-1:exon

XP_037870262.1
type: Protein
SIO_000068: ncbiprotein

position:212081:-1
position: 212081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213636:-1
position: 213636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213483-213636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212081-212250:-1:exon

LOC101744654
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 222228..228320
location: region:222228-228320:1
so has part: feature:222228-228320:1:exon
subclass of: SO_0000010

101744654
type: Gene
SIO_000068: ncbigene

position:222228:1
position: 222228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228320:1
position: 228320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222228-228320:1:exon

LOC101744654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744654
product: uncharacterized LOC101744654
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021348481.2
SIO_010081: LOC101744654
subclass of: SO_0000673
so part of: LOC101744654
location: join(222228..222872,224075..224810,226308..226480,227002..227147,227334..227447,228034..228320)
location: region:222228-228320:1
so has part: feature:222228-222872:1:exon
so has part: feature:224075-224810:1:exon
so has part: feature:226308-226480:1:exon
so has part: feature:227002-227147:1:exon
so has part: feature:227334-227447:1:exon
so has part: feature:228034-228320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222228-222872:1:exon

position:222872:1
position: 222872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224075-224810:1:exon

position:224075:1
position: 224075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224810:1
position: 224810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226308-226480:1:exon

position:226308:1
position: 226308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226480:1
position: 226480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227002-227147:1:exon

position:227002:1
position: 227002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227147:1
position: 227147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227334-227447:1:exon

position:227334:1
position: 227334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227447:1
position: 227447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228034-228320:1:exon

position:228034:1
position: 228034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101744654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744654
translation: MTHAYTVRGIRLVVFVRPGTDLRYYCFNSNLTIDDPSLPKFRELSVYDKVMVNDCGVPRGTYTDAVRKLSITSFHHLTLFFVTCSNDTGLSAQHFDGNDTFHTLQIDCETSYTSLDLRFLDSLPDLKNLTVENVIMPPLPAHNKLTFVTISTGSPRSVGQPWGGCSELEDLIIMDWKINFLPDRWLANCQKLITIQMLRLTELYRLPAQMFSSPSLSAIVISECHVNSLPADLAAGAVNLTVLDVSNNYIEKLNHLFEAEQMLHLQYLDVSVNLVSAMSLGLLSRLQSLLALRVDGADQAHRCRVNWSHYGEIFPWPVLSSLTELSLRYSDARAICPEWGEAMPSLQLLNLTHTPITALQYSDIELLRYKNWEVDLRRNTDLAIMYSRDDFEKVMLDQNTTSAKLWLDTPYSCNCSWYWFARILQEKPQYIKLPEFECFVPESTATVPLHYMTYDTLVCETS
SIO_010081: LOC101744654
subclass of: SO_0000673
so part of: LOC101744654
location: join(222848..222872,224075..224810,226308..226480,227002..227147,227334..227447,228034..228228)
location: region:222848-228228:1
so has part: feature:222848-222872:1:exon
so has part: feature:224075-224810:1:exon
so has part: feature:226308-226480:1:exon
so has part: feature:227002-227147:1:exon
so has part: feature:227334-227447:1:exon
so has part: feature:228034-228228:1:exon

XP_021204156.2
type: Protein
SIO_000068: ncbiprotein

position:222848:1
position: 222848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228228:1
position: 228228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222848-222872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224075-224810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226308-226480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227002-227147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227334-227447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228034-228228:1:exon

LOC110385332
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 228795..230147
location: region:228795-230147:1
so has part: feature:228795-230147:1:exon
subclass of: SO_0000010

110385332
type: Gene
SIO_000068: ncbigene

position:228795:1
position: 228795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230147:1
position: 230147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228795-230147:1:exon

LOC110385332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385332
product: protein toll-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_021348482.2
SIO_010081: LOC110385332
subclass of: SO_0000673
so part of: LOC110385332
location: join(228795..229142,229293..230147)
location: region:228795-230147:1
so has part: feature:228795-229142:1:exon
so has part: feature:229293-230147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228795-229142:1:exon

position:229142:1
position: 229142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229293-230147:1:exon

position:229293:1
position: 229293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110385332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein toll-like
translation: MFLRNNHVSTNNIIDLVIIRFFQTMDLRYNRLSTVDEEVLQKMFGSSKVEYHLAGNPIPCLCNNSAFVVALQHHQHQVKDYRDLSCIGGGSIDQANMRAICFYERLPVYAGVAASLCFLLILILVVLYYRYRNEILVIMYSSGWFSCCLIEDELDKDKRYDVFISFAYGDSSFVSDTLLPRLEGPPNEFSACVHYRDWVPGNWVPALIAHSVAQSRRTIIVLSKNFLSSVWALLEFRTAHVQALEDGRVRLIVILLDDVTNDARIDDELRAYLSTNTFIRWGDALFWNKLLYALPHRKRTAGLHTVNRADGEEVMQRMREDDPPIGLRQDMPLEFFSLPDTPANAEL
SIO_010081: LOC110385332
subclass of: SO_0000673
so part of: LOC110385332
location: join(228912..229142,229293..230105)
location: region:228912-230105:1
so has part: feature:228912-229142:1:exon
so has part: feature:229293-230105:1:exon

XP_021204157.1
type: Protein
SIO_000068: ncbiprotein

position:228912:1
position: 228912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230105:1
position: 230105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228912-229142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229293-230105:1:exon

LOC110385576
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232779..238312)
location: region:232779-238312:-1
so has part: feature:232779-238312:-1:exon
subclass of: SO_0000010

110385576
type: Gene
SIO_000068: ncbigene

position:232779:-1
position: 232779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238312:-1
position: 238312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232779-238312:-1:exon

LOC110385576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385576
product: uncharacterized LOC110385576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038014331.1
SIO_010081: LOC110385576
subclass of: SO_0000673
so part of: LOC110385576
location: complement(join(232779..233756,234988..235141,237217..237297,237416..238312))
location: region:232779-238312:-1
so has part: feature:237416-238312:-1:exon
so has part: feature:237217-237297:-1:exon
so has part: feature:234988-235141:-1:exon
so has part: feature:232779-233756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237416-238312:-1:exon

position:237416:-1
position: 237416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237217-237297:-1:exon

position:237217:-1
position: 237217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237297:-1
position: 237297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234988-235141:-1:exon

position:234988:-1
position: 234988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235141:-1
position: 235141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232779-233756:-1:exon

position:233756:-1
position: 233756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110385576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110385576
translation: MRRSTKVISLVKQSDKGEIKTCSRFMKIYFFVIYILTGFNFGFYTGCGLNFLRVIQASVLLLRSIIASYSIYVAIHFRVLEAIWYCLTFSESLMVVVCFMLSRSALSCKSLFEYLYSVDQELKKSVGPSIEVKLVLYTVVVSVLRLTVYVFCAIAYYESLHEGFSVELIYNTPCYCSDLYLVVHFTIFHSVYCRLKALRISMNEKFDVYKGTLIYKSLIDNLEEIKKSLDVPFFVILLNAVAIAMINILVTLEISYGQTMKFIRTASRYLETVLLFSSAFAPVLAADMMASEAQKIKVTLNNILQTDDSLLEDDRRKVKQFAGYVSARPFRLRACRVLSLDCTLPVTVLSICVTYLIVVVQFTHLY
SIO_010081: LOC110385576
subclass of: SO_0000673
so part of: LOC110385576
location: complement(join(233587..233756,234988..235141,237217..237297,237416..238111))
location: region:233587-238111:-1
so has part: feature:237416-238111:-1:exon
so has part: feature:237217-237297:-1:exon
so has part: feature:234988-235141:-1:exon
so has part: feature:233587-233756:-1:exon

XP_037870259.1
type: Protein
SIO_000068: ncbiprotein

position:233587:-1
position: 233587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238111:-1
position: 238111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237416-238111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237217-237297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234988-235141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233587-233756:-1:exon

LOC101738421
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101738421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252044..271566
location: region:252044-271566:1
so has part: feature:252044-271566:1:exon
subclass of: SO_0000010

101738421
type: Gene
SIO_000068: ncbigene

position:252044:1
position: 252044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271566:1
position: 271566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252044-271566:1:exon

LOC101738421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101738421
product: serine protease persephone-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_038014330.1
SIO_010081: LOC101738421
subclass of: SO_0000673
so part of: LOC101738421
location: join(252044..253035,253579..253676,254277..254344,255746..255807,268547..268713,269386..269498,269586..269738,270065..270203,270440..270571,271359..271566)
location: region:252044-271566:1
so has part: feature:252044-253035:1:exon
so has part: feature:253579-253676:1:exon
so has part: feature:254277-254344:1:exon
so has part: feature:255746-255807:1:exon
so has part: feature:268547-268713:1:exon
so has part: feature:269386-269498:1:exon
so has part: feature:269586-269738:1:exon
so has part: feature:270065-270203:1:exon
so has part: feature:270440-270571:1:exon
so has part: feature:271359-271566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252044-253035:1:exon

position:253035:1
position: 253035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253579-253676:1:exon

position:253579:1
position: 253579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253676:1
position: 253676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254277-254344:1:exon

position:254277:1
position: 254277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254344:1
position: 254344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255746-255807:1:exon

position:255746:1
position: 255746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255807:1
position: 255807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268547-268713:1:exon

position:268547:1
position: 268547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268713:1
position: 268713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:269386-269498:1:exon

position:269386:1
position: 269386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269498:1
position: 269498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269586-269738:1:exon

position:269586:1
position: 269586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269738:1
position: 269738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:270065-270203:1:exon

position:270065:1
position: 270065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270203:1
position: 270203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:270440-270571:1:exon

position:270440:1
position: 270440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270571:1
position: 270571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:271359-271566:1:exon

position:271359:1
position: 271359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101738421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101738421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease persephone-like
translation: MLRAALALGPVLLCCLKITTADIEGAPCVRDGYNGTCVLSKRCETLILDYKQKKFPPVCGLRGKEPIVCCTDCELVDNIDKIYLSRKFDRLEKKNKKSWDACIDNILDIPSYFCPGGASYGFEKSWNSEKKCHIIQSYGISPAGGTAAERAEFPFMALLGFGASAEEAQWLCGGSVLSARYILTAAHCISEPRLGPLKYAALGILKRSDPPEIWQRHTLAQVIPHPDYASPSKYHDIALLKTEKQIQFNINVVPACLYSGEKKRNIDPSRALALGWGYLGPNTRLADVLQKVEVSEFTAEECLTHYPPHRHLLDGFDNSTQLCYGDRDKTRDTCQGDSGGPLILHNNEVGCAKAVFGVTSSGVECDVATAGLYTRVEHYKPWIESIVWP
SIO_010081: LOC101738421
subclass of: SO_0000673
so part of: LOC101738421
location: join(252963..253035,253579..253676,254277..254344,255746..255807,268547..268713,269386..269498,269586..269738,270065..270203,270440..270571,271359..271523)
location: region:252963-271523:1
so has part: feature:252963-253035:1:exon
so has part: feature:253579-253676:1:exon
so has part: feature:254277-254344:1:exon
so has part: feature:255746-255807:1:exon
so has part: feature:268547-268713:1:exon
so has part: feature:269386-269498:1:exon
so has part: feature:269586-269738:1:exon
so has part: feature:270065-270203:1:exon
so has part: feature:270440-270571:1:exon
so has part: feature:271359-271523:1:exon

XP_037870258.1
type: Protein
SIO_000068: ncbiprotein

position:252963:1
position: 252963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271523:1
position: 271523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252963-253035:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253579-253676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254277-254344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255746-255807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268547-268713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269386-269498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269586-269738:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270065-270203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:270440-270571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271359-271523:1:exon

Mir3348
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: bmo-mir-3348
gene: Mir3348
gene synonym: bmo-mir-3348
note: microRNA mir-3348; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(259799..259868)
location: region:259799-259868:-1
so has part: feature:259799-259868:-1:exon
subclass of: SO_0000571

102464586
type: Gene
SIO_000068: ncbigene

MI0014406
type: miRBase
SIO_000068: mirbase

position:259799:-1
position: 259799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259868:-1
position: 259868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259799-259868:-1:exon

Mir3348
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 7091
alternative label: bmo-mir-3348
gene: Mir3348
gene synonym: bmo-mir-3348
product: microRNA mir-3348
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_107625.1
SIO_010081: Mir3348
subclass of: SO_0000673
so part of: Mir3348
location: complement(259799..259868)
location: region:259799-259868:-1
so has part: feature:259799-259868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259799-259868:-1:exon

Mir3348
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
alternative label: bmo-mir-3348
nc RNA class: miRNA
gene: Mir3348
gene synonym: bmo-mir-3348
product: bmo-miR-3348
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: Mir3348
subclass of: SO_0000673
so part of: Mir3348
location: complement(259804..259824)
location: region:259804-259824:-1
so has part: feature:259804-259824:-1:exon

MIMAT0015534
type: miRBase
SIO_000068: mirbase

position:259804:-1
position: 259804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259824:-1
position: 259824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259804-259824:-1:exon

LOC101743260
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283826..289290
location: region:283826-289290:1
so has part: feature:283826-289290:1:exon
subclass of: SO_0000010

101743260
type: Gene
SIO_000068: ncbigene

position:283826:1
position: 283826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289290:1
position: 289290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283826-289290:1:exon

LOC101743260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743260
product: serine protease persephone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_021348486.2
SIO_010081: LOC101743260
subclass of: SO_0000673
so part of: LOC101743260
location: join(283826..284021,285173..285270,285635..285702,286327..286388,287280..287446,287523..287635,287723..287875,288226..288364,288872..289003,289076..289290)
location: region:283826-289290:1
so has part: feature:283826-284021:1:exon
so has part: feature:285173-285270:1:exon
so has part: feature:285635-285702:1:exon
so has part: feature:286327-286388:1:exon
so has part: feature:287280-287446:1:exon
so has part: feature:287523-287635:1:exon
so has part: feature:287723-287875:1:exon
so has part: feature:288226-288364:1:exon
so has part: feature:288872-289003:1:exon
so has part: feature:289076-289290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283826-284021:1:exon

position:284021:1
position: 284021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285173-285270:1:exon

position:285173:1
position: 285173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285270:1
position: 285270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285635-285702:1:exon

position:285635:1
position: 285635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285702:1
position: 285702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286327-286388:1:exon

position:286327:1
position: 286327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286388:1
position: 286388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287280-287446:1:exon

position:287280:1
position: 287280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287446:1
position: 287446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287523-287635:1:exon

position:287523:1
position: 287523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287635:1
position: 287635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287723-287875:1:exon

position:287723:1
position: 287723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287875:1
position: 287875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288226-288364:1:exon

position:288226:1
position: 288226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288364:1
position: 288364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288872-289003:1:exon

position:288872:1
position: 288872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289003:1
position: 289003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289076-289290:1:exon

position:289076:1
position: 289076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743260
product: serine protease persephone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038014328.1
SIO_010081: LOC101743260
subclass of: SO_0000673
so part of: LOC101743260
location: join(283826..284021,285173..285270,285635..285702,286327..286388,287280..287446,287523..287635,287723..287875,288226..288364,289076..289290)
location: region:283826-289290:1
so has part: feature:283826-284021:1:exon
so has part: feature:285173-285270:1:exon
so has part: feature:285635-285702:1:exon
so has part: feature:286327-286388:1:exon
so has part: feature:287280-287446:1:exon
so has part: feature:287523-287635:1:exon
so has part: feature:287723-287875:1:exon
so has part: feature:288226-288364:1:exon
so has part: feature:289076-289290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283826-284021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285173-285270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285635-285702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286327-286388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287280-287446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287523-287635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287723-287875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288226-288364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289076-289290:1:exon

LOC101743260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease persephone isoform X1
translation: MLAFASSRDIALIAVTGGGANAQSRHSRGAGLCAHKMSRAAFVLGSVLLSYFRSTVADVEGARCVRDGYNGTCVLSKRCETLILDYRDRSFPPVCGLRGKEPIVCCTDCELVDNIDNIYLTKKYGRLEKINKKSWDACIDNVLNIPSYLCQSSTTFDFDKYWDVKKKCHKINLSLVAPAGGKDAERAEFPFMALLGFGPSAEEAQWLCGGSVLSARYILTAAHCISEPRLGPLKYAALGILKRSDPPEIWQRHTLAQVIPHPDYASPSKYHDIALLKTQKQIQFNVNVVPACLYSGEKKRNIDPSRALALGWGYLGPNTQLADVLQKVEVSEFTAEECSTRYPSNRHMLDGFDNSTQLCYGDRKMTRDTCQGDSGGPLILHQSEVGCAKAVFGVTSSGVECDEATAGLYTRVEHYKPWIESIVWP
SIO_010081: LOC101743260
subclass of: SO_0000673
so part of: LOC101743260
location: join(283841..284021,285173..285270,285635..285702,286327..286388,287280..287446,287523..287635,287723..287875,288226..288364,288872..289003,289076..289240)
location: region:283841-289240:1
so has part: feature:283841-284021:1:exon
so has part: feature:285173-285270:1:exon
so has part: feature:285635-285702:1:exon
so has part: feature:286327-286388:1:exon
so has part: feature:287280-287446:1:exon
so has part: feature:287523-287635:1:exon
so has part: feature:287723-287875:1:exon
so has part: feature:288226-288364:1:exon
so has part: feature:288872-289003:1:exon
so has part: feature:289076-289240:1:exon

XP_021204161.1
type: Protein
SIO_000068: ncbiprotein

position:283841:1
position: 283841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289240:1
position: 289240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283841-284021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285173-285270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285635-285702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286327-286388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287280-287446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287523-287635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287723-287875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288226-288364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288872-289003:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289076-289240:1:exon

LOC101743260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease snake isoform X2
translation: MLAFASSRDIALIAVTGGGANAQSRHSRGAGLCAHKMSRAAFVLGSVLLSYFRSTVADVEGARCVRDGYNGTCVLSKRCETLILDYRDRSFPPVCGLRGKEPIVCCTDCELVDNIDNIYLTKKYGRLEKINKKSWDACIDNVLNIPSYLCQSSTTFDFDKYWDVKKKCHKINLSLVAPAGGKDAERAEFPFMALLGFGPSAEEAQWLCGGSVLSARYILTAAHCISEPRLGPLKYAALGILKRSDPPEIWQRHTLAQVIPHPDYASPSKYHDIALLKTQKQIQFNVNVVPACLYSGEKKRNIDPSRALALGWGYLGPNTQLADVLQKGDSGGPLILHQSEVGCAKAVFGVTSSGVECDEATAGLYTRVEHYKPWIESIVWP
SIO_010081: LOC101743260
subclass of: SO_0000673
so part of: LOC101743260
location: join(283841..284021,285173..285270,285635..285702,286327..286388,287280..287446,287523..287635,287723..287875,288226..288364,289076..289240)
location: region:283841-289240:1
so has part: feature:283841-284021:1:exon
so has part: feature:285173-285270:1:exon
so has part: feature:285635-285702:1:exon
so has part: feature:286327-286388:1:exon
so has part: feature:287280-287446:1:exon
so has part: feature:287523-287635:1:exon
so has part: feature:287723-287875:1:exon
so has part: feature:288226-288364:1:exon
so has part: feature:289076-289240:1:exon

XP_037870256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283841-284021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285173-285270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285635-285702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286327-286388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287280-287446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287523-287635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287723-287875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288226-288364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289076-289240:1:exon

LOC119629223
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 289809..294321
location: region:289809-294321:1
so has part: feature:289809-294321:1:exon
subclass of: SO_0000010

119629223
type: Gene
SIO_000068: ncbigene

position:289809:1
position: 289809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294321:1
position: 294321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289809-294321:1:exon

LOC119629223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629223
product: serine protease snake-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014332.1
SIO_010081: LOC119629223
subclass of: SO_0000673
so part of: LOC119629223
location: join(289809..290174,292387..292573,293311..293442,294117..294321)
location: region:289809-294321:1
so has part: feature:289809-290174:1:exon
so has part: feature:292387-292573:1:exon
so has part: feature:293311-293442:1:exon
so has part: feature:294117-294321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289809-290174:1:exon

position:290174:1
position: 290174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292387-292573:1:exon

position:292387:1
position: 292387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292573:1
position: 292573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293311-293442:1:exon

position:293311:1
position: 293311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293442:1
position: 293442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294117-294321:1:exon

position:294117:1
position: 294117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119629223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease snake-like
translation: MCHVTLVCCCLVPHTCDDICHVPLTSVLCIPTLCTVSVSARRAAGAWCLRDEHNGTCVLAKRCDSLILDYKSHNFPPVEVSEFTAEECLTHYPPHRHLLDGFDNSTQLCYGDRDKTRDTCQGDSGGPLIFEEGEVRCTRTIFGVMSSGVESM
SIO_010081: LOC119629223
subclass of: SO_0000673
so part of: LOC119629223
location: join(290131..290174,292387..292573,293311..293442,294117..294212)
location: region:290131-294212:1
so has part: feature:290131-290174:1:exon
so has part: feature:292387-292573:1:exon
so has part: feature:293311-293442:1:exon
so has part: feature:294117-294212:1:exon

XP_037870260.1
type: Protein
SIO_000068: ncbiprotein

position:290131:1
position: 290131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294212:1
position: 294212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290131-290174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292387-292573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293311-293442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294117-294212:1:exon

LOC119629223
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC119629223
product: serine protease snake-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_005245279.1
SIO_010081: LOC119629223
so part of: LOC119629223
location: join(291930..292677,293311..293444)
location: region:291930-293444:1
so has part: feature:291930-292677:1:exon
so has part: feature:293311-293444:1:exon

position:291930:1
position: 291930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293444:1
position: 293444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291930-292677:1:exon

position:292677:1
position: 292677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293311-293444:1:exon

LOC119629224
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294534..296573)
location: region:294534-296573:-1
so has part: feature:294534-296573:-1:exon
subclass of: SO_0000010

119629224
type: Gene
SIO_000068: ncbigene

position:294534:-1
position: 294534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296573:-1
position: 296573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294534-296573:-1:exon

LOC119629224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629224
product: uncharacterized LOC119629224
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038014333.1
SIO_010081: LOC119629224
subclass of: SO_0000673
so part of: LOC119629224
location: complement(join(294534..294774,295957..296110,296441..296573))
location: region:294534-296573:-1
so has part: feature:296441-296573:-1:exon
so has part: feature:295957-296110:-1:exon
so has part: feature:294534-294774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296441-296573:-1:exon

position:296441:-1
position: 296441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295957-296110:-1:exon

position:295957:-1
position: 295957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296110:-1
position: 296110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294534-294774:-1:exon

position:294774:-1
position: 294774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629224
translation: MVDVFITLEMIISNKYNMAVYVVRYLEITLDFLMLFAPVLLADMMAVQVDGLKITLHDRLCLNNGVDMKRYSSLAEFIGYVEARGCRLRACRVVPLDLTLPVTVFNVCVTYLIVMIQFADLY
SIO_010081: LOC119629224
subclass of: SO_0000673
so part of: LOC119629224
location: complement(join(294605..294774,295957..296110,296441..296485))
location: region:294605-296485:-1
so has part: feature:296441-296485:-1:exon
so has part: feature:295957-296110:-1:exon
so has part: feature:294605-294774:-1:exon

XP_037870261.1
type: Protein
SIO_000068: ncbiprotein

position:294605:-1
position: 294605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296485:-1
position: 296485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296441-296485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295957-296110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294605-294774:-1:exon

LOC101744796
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300041..505669)
location: region:300041-505669:-1
so has part: feature:300041-505669:-1:exon
subclass of: SO_0000010

101744796
type: Gene
SIO_000068: ncbigene

position:300041:-1
position: 300041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505669:-1
position: 505669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300041-505669:-1:exon

LOC101744796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744796
product: protein nubbin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038014454.1
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300041..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,386991..387050,409996..410098,505640..505669))
location: region:300041-505669:-1
so has part: feature:505640-505669:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300041-300693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505669:-1:exon

position:505640:-1
position: 505640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

position:409996:-1
position: 409996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410098:-1
position: 410098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

position:386991:-1
position: 386991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387050:-1
position: 387050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308964-309011:-1:exon

position:308964:-1
position: 308964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309011:-1
position: 309011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304301-304458:-1:exon

position:304301:-1
position: 304301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304458:-1
position: 304458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302544-302648:-1:exon

position:302544:-1
position: 302544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302648:-1
position: 302648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:301928-302012:-1:exon

position:301928:-1
position: 301928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302012:-1
position: 302012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301311-301532:-1:exon

position:301311:-1
position: 301311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301532:-1
position: 301532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:300795-301192:-1:exon

position:300795:-1
position: 300795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301192:-1
position: 301192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:300041-300693:-1:exon

position:300693:-1
position: 300693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744796
product: protein nubbin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038014453.1
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300041..300693,300795..301192,301311..301532,301928..302012,302544..302633,304301..304458,308964..309011,341962..341994,386991..387050,409996..410098,505640..505669))
location: region:300041-505669:-1
so has part: feature:505640-505669:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:341962-341994:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302633:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300041-300693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341962-341994:-1:exon

position:341962:-1
position: 341962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341994:-1
position: 341994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302544-302633:-1:exon

position:302633:-1
position: 302633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300041-300693:-1:exon

LOC101744796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744796
product: protein nubbin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038014452.1
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300041..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,341962..341994,386991..387050,409996..410098,505640..505669))
location: region:300041-505669:-1
so has part: feature:505640-505669:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:341962-341994:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300041-300693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341962-341994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302544-302648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300041-300693:-1:exon

LOC101744796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744796
product: protein nubbin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038014455.1
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300041..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,314736..314875))
location: region:300041-314875:-1
so has part: feature:314736-314875:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300041-300693:-1:exon

position:314875:-1
position: 314875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314736-314875:-1:exon

position:314736:-1
position: 314736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302544-302648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300041-300693:-1:exon

LOC101744796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein nubbin isoform X3
translation: MDLSQRRREPTSWLVYPPSRIQKLLETSRSQISRPSVITLSGRADVTSFFNTQMVFDLKEESGELIKSPSPPPSHDGSASGEGEISGDERPPSPPRAPSAPLPHPAHPAHPAHPGPPHSAASAAAAVLFPMMQSAAGAGGALAQLQHLLLTQHGAHSLLLHTQVQQAVAQAAAQQLQQLQARASVVPQPTTEGRSPSPRRTPPGAGAFLTPHTPGSGRARSPHTHTPLHAHAHKPRALEPAVDDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLAGGGGVAGAGAGLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKEKRINPPTGEGGAGLLPALAHAHSHALHAHAHAQAHAHAHAHALQPLALLGRALPAPRD
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300514..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,386991..387050,409996..410098,505640..505654))
location: region:300514-505654:-1
so has part: feature:505640-505654:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300514-300693:-1:exon

XP_037870382.1
type: Protein
SIO_000068: ncbiprotein

position:300514:-1
position: 300514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505654:-1
position: 505654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302544-302648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300514-300693:-1:exon

LOC101744796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein nubbin isoform X2
translation: MDLSQRRREPTSWLVYPPSRIQKLLETSRSQISRPSVITLSGRADVTSFFNTQMVFDLKGEFHRSSQNTEEESGELIKSPSPPPSHDGSASGEGEISGDERPPSPPRAPSAPLPHPAHPAHPAHPGPPHSAASAAAAVLSAAGAGGALAQLQHLLLTQHGAHSLLLHTQVQQAVAQAAAQQLQQLQARASVVPQPTTEGRSPSPRRTPPGAGAFLTPHTPGSGRARSPHTHTPLHAHAHKPRALEPAVDDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLAGGGGVAGAGAGLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKEKRINPPTGEGGAGLLPALAHAHSHALHAHAHAQAHAHAHAHALQPLALLGRALPAPRD
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300514..300693,300795..301192,301311..301532,301928..302012,302544..302633,304301..304458,308964..309011,341962..341994,386991..387050,409996..410098,505640..505654))
location: region:300514-505654:-1
so has part: feature:505640-505654:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:341962-341994:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302633:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300514-300693:-1:exon

XP_037870381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341962-341994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302544-302633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300514-300693:-1:exon

LOC101744796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein nubbin isoform X1
translation: MDLSQRRREPTSWLVYPPSRIQKLLETSRSQISRPSVITLSGRADVTSFFNTQMVFDLKGEFHRSSQNTEEESGELIKSPSPPPSHDGSASGEGEISGDERPPSPPRAPSAPLPHPAHPAHPAHPGPPHSAASAAAAVLFPMMQSAAGAGGALAQLQHLLLTQHGAHSLLLHTQVQQAVAQAAAQQLQQLQARASVVPQPTTEGRSPSPRRTPPGAGAFLTPHTPGSGRARSPHTHTPLHAHAHKPRALEPAVDDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLAGGGGVAGAGAGLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKEKRINPPTGEGGAGLLPALAHAHSHALHAHAHAQAHAHAHAHALQPLALLGRALPAPRD
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300514..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,341962..341994,386991..387050,409996..410098,505640..505654))
location: region:300514-505654:-1
so has part: feature:505640-505654:-1:exon
so has part: feature:409996-410098:-1:exon
so has part: feature:386991-387050:-1:exon
so has part: feature:341962-341994:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300514-300693:-1:exon

XP_037870380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409996-410098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386991-387050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341962-341994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302544-302648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300514-300693:-1:exon

LOC101744796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein nubbin isoform X4
translation: MVLSACVRAATRNYCGSYQESGELIKSPSPPPSHDGSASGEGEISGDERPPSPPRAPSAPLPHPAHPAHPAHPGPPHSAASAAAAVLFPMMQSAAGAGGALAQLQHLLLTQHGAHSLLLHTQVQQAVAQAAAQQLQQLQARASVVPQPTTEGRSPSPRRTPPGAGAFLTPHTPGSGRARSPHTHTPLHAHAHKPRALEPAVDDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLAGGGGVAGAGAGLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKEKRINPPTGEGGAGLLPALAHAHSHALHAHAHAQAHAHAHAHALQPLALLGRALPAPRD
SIO_010081: LOC101744796
subclass of: SO_0000673
so part of: LOC101744796
location: complement(join(300514..300693,300795..301192,301311..301532,301928..302012,302544..302648,304301..304458,308964..309011,314736..314790))
location: region:300514-314790:-1
so has part: feature:314736-314790:-1:exon
so has part: feature:308964-309011:-1:exon
so has part: feature:304301-304458:-1:exon
so has part: feature:302544-302648:-1:exon
so has part: feature:301928-302012:-1:exon
so has part: feature:301311-301532:-1:exon
so has part: feature:300795-301192:-1:exon
so has part: feature:300514-300693:-1:exon

XP_037870383.1
type: Protein
SIO_000068: ncbiprotein

position:314790:-1
position: 314790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314736-314790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308964-309011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304301-304458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302544-302648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301928-302012:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301311-301532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300795-301192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300514-300693:-1:exon

LOC110385334
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510963..578560)
location: region:510963-578560:-1
so has part: feature:510963-578560:-1:exon
subclass of: SO_0000010

110385334
type: Gene
SIO_000068: ncbigene

position:510963:-1
position: 510963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578560:-1
position: 578560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510963-578560:-1:exon

LOC110385334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038014576.1
SIO_010081: LOC110385334
subclass of: SO_0000673
so part of: LOC110385334
location: complement(join(510963..511471,522282..522387,531510..531585,532077..532199,537676..537889,577267..577916))
location: region:510963-577916:-1
so has part: feature:577267-577916:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:510963-511471:-1:exon

position:577916:-1
position: 577916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577267-577916:-1:exon

position:577267:-1
position: 577267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537676-537889:-1:exon

position:537676:-1
position: 537676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537889:-1
position: 537889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532077-532199:-1:exon

position:532077:-1
position: 532077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532199:-1
position: 532199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531510-531585:-1:exon

position:531510:-1
position: 531510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531585:-1
position: 531585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522282-522387:-1:exon

position:522282:-1
position: 522282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522387:-1
position: 522387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:510963-511471:-1:exon

position:511471:-1
position: 511471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110385334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038014577.1
SIO_010081: LOC110385334
subclass of: SO_0000673
so part of: LOC110385334
location: complement(join(510963..511471,522282..522387,531510..531585,532077..532199,537676..537889,540323..540557))
location: region:510963-540557:-1
so has part: feature:540323-540557:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:510963-511471:-1:exon

position:540557:-1
position: 540557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540323-540557:-1:exon

position:540323:-1
position: 540323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510963-511471:-1:exon

LOC110385334
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245310.1
SIO_010081: LOC110385334
so part of: LOC110385334
location: complement(join(511269..511471,522282..522387,531510..531585,532077..532199,537676..537889,577267..577568,577923..578384))
location: region:511269-578384:-1
so has part: feature:577923-578384:-1:exon
so has part: feature:577267-577568:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511269-511471:-1:exon

position:511269:-1
position: 511269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578384:-1
position: 578384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577923-578384:-1:exon

position:577923:-1
position: 577923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577267-577568:-1:exon

position:577568:-1
position: 577568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:511269-511471:-1:exon

LOC110385334
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245311.1
SIO_010081: LOC110385334
so part of: LOC110385334
location: complement(join(511270..511471,522282..522387,531510..531585,532077..532199,537676..537889,577267..577568,577923..578013,578391..578560))
location: region:511270-578560:-1
so has part: feature:578391-578560:-1:exon
so has part: feature:577923-578013:-1:exon
so has part: feature:577267-577568:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511270-511471:-1:exon

position:511270:-1
position: 511270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578391-578560:-1:exon

position:578391:-1
position: 578391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577923-578013:-1:exon

position:578013:-1
position: 578013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577267-577568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:511270-511471:-1:exon

LOC110385334
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005245307.1
SIO_010081: LOC110385334
so part of: LOC110385334
location: complement(join(511279..511471,522282..522387,531510..531585,532077..532199,537676..537889,577267..577573,577923..578384))
location: region:511279-578384:-1
so has part: feature:577923-578384:-1:exon
so has part: feature:577267-577573:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511279-511471:-1:exon

position:511279:-1
position: 511279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577923-578384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577267-577573:-1:exon

position:577573:-1
position: 577573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:511279-511471:-1:exon

LOC110385334
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005245309.1
SIO_010081: LOC110385334
so part of: LOC110385334
location: complement(join(511280..511471,522282..522387,531510..531585,532077..532199,537676..537889,577267..577573,577923..578013,578391..578555))
location: region:511280-578555:-1
so has part: feature:578391-578555:-1:exon
so has part: feature:577923-578013:-1:exon
so has part: feature:577267-577573:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511280-511471:-1:exon

position:511280:-1
position: 511280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578555:-1
position: 578555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578391-578555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577923-578013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577267-577573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:511280-511471:-1:exon

LOC110385334
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC110385334
product: uncharacterized LOC110385334, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005245308.1
SIO_010081: LOC110385334
so part of: LOC110385334
location: complement(join(511284..511471,531510..531585,532077..532199,537676..537889,577267..577573,577923..578384))
location: region:511284-578384:-1
so has part: feature:577923-578384:-1:exon
so has part: feature:577267-577573:-1:exon
so has part: feature:537676-537889:-1:exon
so has part: feature:532077-532199:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:511284-511471:-1:exon

position:511284:-1
position: 511284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577923-578384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577267-577573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537676-537889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532077-532199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:511284-511471:-1:exon

LOC110385334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110385334
translation: MSREEQVCRCAVSAGLMWILFLLHLKVDRKSRSPKLDVDRCKLAALAAVWINVYSTESRVAGFESGGASRSPESSWKSFKGRRRNLVNKTLQAISLYSKINNHKQ
SIO_010081: LOC110385334
subclass of: SO_0000673
so part of: LOC110385334
location: complement(join(511338..511471,522282..522387,531510..531585,532077..532078))
location: region:511338-532078:-1
so has part: feature:532077-532078:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511338-511471:-1:exon

XP_037870504.1
type: Protein
SIO_000068: ncbiprotein

position:511338:-1
position: 511338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532078:-1
position: 532078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532077-532078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511338-511471:-1:exon

LOC110385334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110385334
translation: MSREEQVCRCAVSAGLMWILFLLHLKVDRKSRSPKLDVDRCKLAALAAVWINVYSTESRVAGFESGGASRSPESSWKSFKGRRRNLVNKTLQAISLYSKINNHKQ
SIO_010081: LOC110385334
subclass of: SO_0000673
so part of: LOC110385334
location: complement(join(511338..511471,522282..522387,531510..531585,532077..532078))
location: region:511338-532078:-1
so has part: feature:532077-532078:-1:exon
so has part: feature:531510-531585:-1:exon
so has part: feature:522282-522387:-1:exon
so has part: feature:511338-511471:-1:exon

XP_037870505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532077-532078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531510-531585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522282-522387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511338-511471:-1:exon

LOC119629325
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629325
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 563133..563291
location: region:563133-563291:1
so has part: feature:563133-563291:1:exon
subclass of: SO_0000623

119629325
type: Gene
SIO_000068: ncbigene

position:563133:1
position: 563133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563291:1
position: 563291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563133-563291:1:exon

LOC119629325
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: snRNA
gene: LOC119629325
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005245346.1
SIO_010081: LOC119629325
subclass of: SO_0000673
so part of: LOC119629325
location: 563133..563291
location: region:563133-563291:1
so has part: feature:563133-563291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563133-563291:1:exon

LOC101743502
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 579245..582621
location: region:579245-582621:1
so has part: feature:579245-582621:1:exon
subclass of: SO_0000010

101743502
type: Gene
SIO_000068: ncbigene

position:579245:1
position: 579245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582621:1
position: 582621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579245-582621:1:exon

LOC101743502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743502
product: transmembrane protein 147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_038014444.1
SIO_010081: LOC101743502
subclass of: SO_0000673
so part of: LOC101743502
location: join(579245..579435,579512..579653,581178..581300,582188..582621)
location: region:579245-582621:1
so has part: feature:579245-579435:1:exon
so has part: feature:579512-579653:1:exon
so has part: feature:581178-581300:1:exon
so has part: feature:582188-582621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579245-579435:1:exon

position:579435:1
position: 579435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579512-579653:1:exon

position:579512:1
position: 579512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579653:1
position: 579653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581178-581300:1:exon

position:581178:1
position: 581178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581300:1
position: 581300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582188-582621:1:exon

position:582188:1
position: 582188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 147
translation: MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDSDSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRTVLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALTPYRALIEEAIGSIFHLCAWALVAVRAIHASAVGLSALATYAILAQQIGI
SIO_010081: LOC101743502
subclass of: SO_0000673
so part of: LOC101743502
location: join(579359..579435,579512..579653,581178..581300,582188..582535)
location: region:579359-582535:1
so has part: feature:579359-579435:1:exon
so has part: feature:579512-579653:1:exon
so has part: feature:581178-581300:1:exon
so has part: feature:582188-582535:1:exon

XP_037870372.1
type: Protein
SIO_000068: ncbiprotein

position:579359:1
position: 579359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582535:1
position: 582535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579359-579435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579512-579653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581178-581300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582188-582535:1:exon

LOC101744940
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 583778..592453
location: region:583778-592453:1
so has part: feature:583778-592453:1:exon
subclass of: SO_0000010

101744940
type: Gene
SIO_000068: ncbigene

position:583778:1
position: 583778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592453:1
position: 592453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583778-592453:1:exon

LOC101744940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744940
product: uncharacterized LOC101744940, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_038014441.1
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(583778..584350,585623..585792,586209..586293,587137..587299,587511..587730,588022..588157,591469..592453)
location: region:583778-592453:1
so has part: feature:583778-584350:1:exon
so has part: feature:585623-585792:1:exon
so has part: feature:586209-586293:1:exon
so has part: feature:587137-587299:1:exon
so has part: feature:587511-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-592453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583778-584350:1:exon

position:584350:1
position: 584350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585623-585792:1:exon

position:585623:1
position: 585623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585792:1
position: 585792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:586209-586293:1:exon

position:586209:1
position: 586209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586293:1
position: 586293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587137-587299:1:exon

position:587137:1
position: 587137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587299:1
position: 587299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:587511-587730:1:exon

position:587511:1
position: 587511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587730:1
position: 587730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588022-588157:1:exon

position:588022:1
position: 588022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588157:1
position: 588157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:591469-592453:1:exon

position:591469:1
position: 591469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101744940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744940
product: uncharacterized LOC101744940, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_038014442.1
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(583779..584350,585623..585792,586209..586293,587137..587299,587571..587730,588022..588157,591469..592453)
location: region:583779-592453:1
so has part: feature:583779-584350:1:exon
so has part: feature:585623-585792:1:exon
so has part: feature:586209-586293:1:exon
so has part: feature:587137-587299:1:exon
so has part: feature:587571-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-592453:1:exon

position:583779:1
position: 583779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583779-584350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585623-585792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586209-586293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587137-587299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587571-587730:1:exon

position:587571:1
position: 587571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588022-588157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591469-592453:1:exon

LOC101744940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744940 isoform X1
translation: MLTTVIMLFLAKTSLAYEMRCSDQKNESVSFMPSNDGVMGRYVVEVCMKSIPNPKEWALDLMVEERARTYSKTLYARKPGETHSMFKAYYTDENFKELNCTHVCLTLNFEMIFSSCYLLVSVLTGDYTGTPYLTYHNITNNYTRNNFSGEPIVSYYGHEKFASIDFYTAAPPDLYDIFLCPKSNLHANCLNMMNNCTITFSPAKVHCSLSEAGCHILELSVNEAPWKHGMFKNQSNTIYEFSITLHQVSHKLEWHSVMMRAGWRPGSAPTVSGWGGGAAWLAGAVLAAAALLLLGCRLRASAHFRKRVLYYWTRRSETAAPPPPPPRGAPVLLLYAREGAAGQRVVNSLRDLLQATCGVKVQDVYSAEWQRACGADPAGALRAALEPRGCARLVLLQTPALGALHAAPAAPDAGPLLGERVLYRAPHFADTLLPYALRLLVGTAHLRAPYRRLYLATLTDLDTDVFPQLVPYVRYRLPDALPALLRDLGAGPEPAAGDAHDQLAAAIQEFVVHVRNNPDYLTEELVLVS
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(584045..584350,585623..585792,586209..586293,587137..587299,587511..587730,588022..588157,591469..591978)
location: region:584045-591978:1
so has part: feature:584045-584350:1:exon
so has part: feature:585623-585792:1:exon
so has part: feature:586209-586293:1:exon
so has part: feature:587137-587299:1:exon
so has part: feature:587511-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-591978:1:exon

XP_037870369.1
type: Protein
SIO_000068: ncbiprotein

position:584045:1
position: 584045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591978:1
position: 591978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584045-584350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585623-585792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586209-586293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587137-587299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587511-587730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588022-588157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591469-591978:1:exon

LOC101744940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744940 isoform X2
translation: MLTTVIMLFLAKTSLAYEMRCSDQKNESVSFMPSNDGVMGRYVVEVCMKSIPNPKEWALDLMVEERARTYSKTLYARKPGETHSMFKAYYTDENFKELNCTHVCLTLNFEMIFSSCYLLVSVLTGDYTGTPYLTYHNITNNYTRNNFSGEPIVSYYGHEKFASIDFYTAAPPDLYDIFLCPKSNLHANCLNMMNNCTITFSPAKVHCSLSEAGCHILELSVNEAPWKHGMFKNQSNTIYEFCWRPGSAPTVSGWGGGAAWLAGAVLAAAALLLLGCRLRASAHFRKRVLYYWTRRSETAAPPPPPPRGAPVLLLYAREGAAGQRVVNSLRDLLQATCGVKVQDVYSAEWQRACGADPAGALRAALEPRGCARLVLLQTPALGALHAAPAAPDAGPLLGERVLYRAPHFADTLLPYALRLLVGTAHLRAPYRRLYLATLTDLDTDVFPQLVPYVRYRLPDALPALLRDLGAGPEPAAGDAHDQLAAAIQEFVVHVRNNPDYLTEELVLVS
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(584045..584350,585623..585792,586209..586293,587137..587299,587571..587730,588022..588157,591469..591978)
location: region:584045-591978:1
so has part: feature:584045-584350:1:exon
so has part: feature:585623-585792:1:exon
so has part: feature:586209-586293:1:exon
so has part: feature:587137-587299:1:exon
so has part: feature:587571-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-591978:1:exon

XP_037870370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584045-584350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585623-585792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586209-586293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587137-587299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587571-587730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588022-588157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591469-591978:1:exon

LOC101744940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744940
product: uncharacterized LOC101744940, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038014443.1
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(586203..586293,586402..586499,587137..587299,587511..587730,588022..588157,591469..592453)
location: region:586203-592453:1
so has part: feature:586203-586293:1:exon
so has part: feature:586402-586499:1:exon
so has part: feature:587137-587299:1:exon
so has part: feature:587511-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-592453:1:exon

position:586203:1
position: 586203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586203-586293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586402-586499:1:exon

position:586402:1
position: 586402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586499:1
position: 586499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587137-587299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587511-587730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588022-588157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591469-592453:1:exon

LOC101744940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744940 isoform X3
translation: MMNNCTITFSPAKVHCSLSEAGCHILELSVNEAPWKHGMFKNQSNTIYEFSITLHQVSHKLEWHSVMMRAGWRPGSAPTVSGWGGGAAWLAGAVLAAAALLLLGCRLRASAHFRKRVLYYWTRRSETAAPPPPPPRGAPVLLLYAREGAAGQRVVNSLRDLLQATCGVKVQDVYSAEWQRACGADPAGALRAALEPRGCARLVLLQTPALGALHAAPAAPDAGPLLGERVLYRAPHFADTLLPYALRLLVGTAHLRAPYRRLYLATLTDLDTDVFPQLVPYVRYRLPDALPALLRDLGAGPEPAAGDAHDQLAAAIQEFVVHVRNNPDYLTEELVLVS
SIO_010081: LOC101744940
subclass of: SO_0000673
so part of: LOC101744940
location: join(587149..587299,587511..587730,588022..588157,591469..591978)
location: region:587149-591978:1
so has part: feature:587149-587299:1:exon
so has part: feature:587511-587730:1:exon
so has part: feature:588022-588157:1:exon
so has part: feature:591469-591978:1:exon

XP_037870371.1
type: Protein
SIO_000068: ncbiprotein

position:587149:1
position: 587149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587149-587299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587511-587730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588022-588157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591469-591978:1:exon

LOC101743642
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598384..662865
location: region:598384-662865:1
so has part: feature:598384-662865:1:exon
subclass of: SO_0000010

101743642
type: Gene
SIO_000068: ncbigene

position:598384:1
position: 598384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662865:1
position: 662865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598384-662865:1:exon

LOC101743642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743642
product: uncharacterized LOC101743642, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_038014653.1
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598384..598902,599159..599216,630100..630150,645821..645927,654209..654406,657856..658003,658774..662865)
location: region:598384-662865:1
so has part: feature:598384-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-658003:1:exon
so has part: feature:658774-662865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598384-598902:1:exon

position:598902:1
position: 598902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

position:599159:1
position: 599159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599216:1
position: 599216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630100-630150:1:exon

position:630100:1
position: 630100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630150:1
position: 630150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645821-645927:1:exon

position:645821:1
position: 645821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645927:1
position: 645927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

position:654209:1
position: 654209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654406:1
position: 654406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:657856-658003:1:exon

position:657856:1
position: 657856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658003:1
position: 658003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658774-662865:1:exon

position:658774:1
position: 658774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743642
product: uncharacterized LOC101743642, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_021348484.2
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598399..598902,599159..599216,645821..645927,653666..653848,654209..654406,657856..658003,658774..662865)
location: region:598399-662865:1
so has part: feature:598399-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-658003:1:exon
so has part: feature:658774-662865:1:exon

position:598399:1
position: 598399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598399-598902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653666-653848:1:exon

position:653666:1
position: 653666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653848:1
position: 653848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657856-658003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658774-662865:1:exon

LOC101743642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743642
product: uncharacterized LOC101743642, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_004926907.4
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598410..598902,599159..599216,630100..630150,645821..645927,653666..653848,654209..654406,657856..658003,658774..662865)
location: region:598410-662865:1
so has part: feature:598410-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-658003:1:exon
so has part: feature:658774-662865:1:exon

position:598410:1
position: 598410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598410-598902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630100-630150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653666-653848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657856-658003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658774-662865:1:exon

LOC101743642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743642 isoform X1
translation: MSVDDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPTPARLLPEPEPDHLYDHHSSEEELEVINGVPSSAPACPGATAESRRRGASSPPPTAPEKRKWSAHPYIDSDELTARAPSSDDDDTKVETPVRFRTSPPLEALKPRRAAAGCACAPDRAWEPPSPHPPPSPHSPHSPRRRRHRPALDFDKMQQLKMGGAGVSGVGSVGRMGSVGRVGGVRSWRAVGGAHAGELSVFCW
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598801..598902,599159..599216,630100..630150,645821..645927,653666..653848,654209..654406,657856..657993)
location: region:598801-657993:1
so has part: feature:598801-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-657993:1:exon

XP_004926964.2
type: Protein
SIO_000068: ncbiprotein

position:598801:1
position: 598801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657993:1
position: 657993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598801-598902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630100-630150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653666-653848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657856-657993:1:exon

LOC101743642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743642 isoform X4
translation: MSVDDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPTPARLLPEPEPDHLYDHHSSEEELEVETPVRFRTSPPLEALKPRRAAAGCACAPDRAWEPPSPHPPPSPHSPHSPRRRRHRPALDFDKMQQLKMGGAGVSGVGSVGRMGSVGRVGGVRSWRAVGGAHAGELSVFCW
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598801..598902,599159..599216,630100..630150,645821..645927,654209..654406,657856..657993)
location: region:598801-657993:1
so has part: feature:598801-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-657993:1:exon

XP_037870581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598801-598902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630100-630150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657856-657993:1:exon

LOC101743642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743642 isoform X2
translation: MSVDDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGMTGEACACGPTPARLLPEPEPDHLYDHHSSEEELEVINGVPSSAPACPGATAESRRRGASSPPPTAPEKRKWSAHPYIDSDELTARAPSSDDDDTKVETPVRFRTSPPLEALKPRRAAAGCACAPDRAWEPPSPHPPPSPHSPHSPRRRRHRPALDFDKMQQLKMGGAGVSGVGSVGRMGSVGRVGGVRSWRAVGGAHAGELSVFCW
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(598801..598902,599159..599216,645821..645927,653666..653848,654209..654406,657856..657993)
location: region:598801-657993:1
so has part: feature:598801-598902:1:exon
so has part: feature:599159-599216:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-657993:1:exon

XP_021204159.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598801-598902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599159-599216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653666-653848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657856-657993:1:exon

LOC119629307
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605890..606927)
location: region:605890-606927:-1
so has part: feature:605890-606927:-1:exon
subclass of: SO_0000011

119629307
type: Gene
SIO_000068: ncbigene

position:605890:-1
position: 605890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606927:-1
position: 606927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605890-606927:-1:exon

LOC119629307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC119629307
product: uncharacterized LOC119629307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245331.1
SIO_010081: LOC119629307
subclass of: SO_0000673
so part of: LOC119629307
location: complement(join(605890..605976,606591..606746,606873..606927))
location: region:605890-606927:-1
so has part: feature:606873-606927:-1:exon
so has part: feature:606591-606746:-1:exon
so has part: feature:605890-605976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606873-606927:-1:exon

position:606873:-1
position: 606873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606591-606746:-1:exon

position:606591:-1
position: 606591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606746:-1
position: 606746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:605890-605976:-1:exon

position:605976:-1
position: 605976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743642
product: uncharacterized LOC101743642, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_012691021.3
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(615482..615588,630100..630150,645821..645927,653666..653848,654209..654406,657856..658003,658774..662865)
location: region:615482-662865:1
so has part: feature:615482-615588:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-658003:1:exon
so has part: feature:658774-662865:1:exon

position:615482:1
position: 615482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615482-615588:1:exon

position:615588:1
position: 615588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630100-630150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653666-653848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657856-658003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658774-662865:1:exon

LOC101743642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743642 isoform X3
translation: MWRRSGDLNTDVIMKWNDGADISMTGEACACGPTPARLLPEPEPDHLYDHHSSEEELEVINGVPSSAPACPGATAESRRRGASSPPPTAPEKRKWSAHPYIDSDELTARAPSSDDDDTKVETPVRFRTSPPLEALKPRRAAAGCACAPDRAWEPPSPHPPPSPHSPHSPRRRRHRPALDFDKMQQLKMGGAGVSGVGSVGRMGSVGRVGGVRSWRAVGGAHAGELSVFCW
SIO_010081: LOC101743642
subclass of: SO_0000673
so part of: LOC101743642
location: join(615573..615588,630100..630150,645821..645927,653666..653848,654209..654406,657856..657993)
location: region:615573-657993:1
so has part: feature:615573-615588:1:exon
so has part: feature:630100-630150:1:exon
so has part: feature:645821-645927:1:exon
so has part: feature:653666-653848:1:exon
so has part: feature:654209-654406:1:exon
so has part: feature:657856-657993:1:exon

XP_012546475.2
type: Protein
SIO_000068: ncbiprotein

position:615573:1
position: 615573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615573-615588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630100-630150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645821-645927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653666-653848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654209-654406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657856-657993:1:exon

LOC101745085
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101745085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(663580..669768)
location: region:663580-669768:-1
so has part: feature:663580-669768:-1:exon
subclass of: SO_0000010

101745085
type: Gene
SIO_000068: ncbigene

position:663580:-1
position: 663580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669768:-1
position: 669768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663580-669768:-1:exon

LOC101745085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101745085
product: protein lethal(2)denticleless
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038014549.1
SIO_010081: LOC101745085
subclass of: SO_0000673
so part of: LOC101745085
location: complement(join(663580..665959,666352..666463,669329..669525,669608..669768))
location: region:663580-669768:-1
so has part: feature:669608-669768:-1:exon
so has part: feature:669329-669525:-1:exon
so has part: feature:666352-666463:-1:exon
so has part: feature:663580-665959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669608-669768:-1:exon

position:669608:-1
position: 669608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669329-669525:-1:exon

position:669329:-1
position: 669329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669525:-1
position: 669525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666352-666463:-1:exon

position:666352:-1
position: 666352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666463:-1
position: 666463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:663580-665959:-1:exon

position:665959:-1
position: 665959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101745085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101745085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lethal(2)denticleless
translation: MNNIQNLIDRELGLHCRFNYDTVLKRLVVNSEESFYGLQSSNVVANFEQDPPIFACRFAETSGYEHILALANEDGKVAIQDTSTQKTASRLEAFQCHNNAVFDLAWMPKNMNFITVSGDHTACLWDAAEGSPKRVLVFSSHTKSVKIAVFRPMEPSVFATGARDGHILIWDIRACNQPTLVLKPDNCLMNCHSNFAPKTPSSHGKRPRIDGHRAVSITGLVFQDDDTLLSCGECDGNIKAWDLRKNYNVYKREPLPKHSIPYCGSSARNGYSNLVIDHSGVRLYASCMDDVIYCFNLAAYNPLPERRYVGHHNGTFYVKSGLSADGAYLVSGSSDKYAYLWNVKWSEPLLRLSGHRAEVTCAALCRRARGPLLVTAGDDARHLLWRLHAAPRPAPPADARAEPVPRRAPPAPLDATPRAAKRRHHPPARSKRCLADLMPADSEPTAKRPRTDVQPAGAKRPHNGEPEPPIPSKYPRIEETTSTWGEAAESRGLTTPTKNYEKRGYKTRSPKSPKPISPSSVCRSPVKASSTKIKILTFTTPTKNLPNFVLNGEAPHLRLMSPAKKPGTTDWLTKLREQKEKVEPGEGASVPLSPREPPPRRNSGAERTPKSAKRSRTILTYFTSVAKNK
SIO_010081: LOC101745085
subclass of: SO_0000673
so part of: LOC101745085
location: complement(join(664422..665959,666352..666463,669329..669525,669608..669650))
location: region:664422-669650:-1
so has part: feature:669608-669650:-1:exon
so has part: feature:669329-669525:-1:exon
so has part: feature:666352-666463:-1:exon
so has part: feature:664422-665959:-1:exon

XP_037870477.1
type: Protein
SIO_000068: ncbiprotein

position:664422:-1
position: 664422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669650:-1
position: 669650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669608-669650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669329-669525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666352-666463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664422-665959:-1:exon

LOC101743785
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 671524..675271
location: region:671524-675271:1
so has part: feature:671524-675271:1:exon
subclass of: SO_0000010

101743785
type: Gene
SIO_000068: ncbigene

position:671524:1
position: 671524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675271:1
position: 675271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671524-675271:1:exon

LOC101743785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743785
product: uncharacterized LOC101743785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_012691022.2
SIO_010081: LOC101743785
subclass of: SO_0000673
so part of: LOC101743785
location: join(671524..671819,671892..675271)
location: region:671524-675271:1
so has part: feature:671524-671819:1:exon
so has part: feature:671892-675271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671524-671819:1:exon

position:671819:1
position: 671819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671892-675271:1:exon

position:671892:1
position: 671892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101743785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743785
translation: MECEVHKEYGRGCVKSGQESRISTEYTREAKRVRATDLHLDFTCTIPDANHRRPQYSARKPEQNDDQHETSVLPLMSNMDEISYWIYTKRAPCLMNYDNLIKKQHVEAQCSKAASKSVSSAIQEVPSPKITKKRKLSILDDDSASVEKQQNLYFDVSQKHNKNTVIISKSDSVGSDVDFNIKNSPCNKKQKRSKLQGSQPTPHKKQNNIITSTPKITSLRRSLRNTKQTFNSSHLNSSFLNNTSVVNGRHLKNNLGEHNTHNYNNTTDGTSPIVDRRNMTTKNVSKKDGLNGQFEDFSDVSGLTANYIRSTKQQSRKTPRKLRVKNCRSLVKQSNQRDDDSVNVDKPMIGPPNHLPLNCSTESSNIMNAVNVKNDKTKTSKNNINVKVMDASKSVNKSQKKVDLNISFQSTSRYPKRNRNSDNSREVIYNTRSSKATGQEHSALVNSNSTEKISSLTSMNAASQEKQTPKKKRTPKKTAPNRTVATRKSERVKKDSLRDKSGFKACFSDSDNDSEPLQKKFFCS
SIO_010081: LOC101743785
subclass of: SO_0000673
so part of: LOC101743785
location: 671896..673470
location: region:671896-673470:1
so has part: feature:671896-673470:1:exon

XP_012546476.2
type: Protein
SIO_000068: ncbiprotein

position:671896:1
position: 671896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673470:1
position: 673470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671896-673470:1:exon

LOC110385336
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 678545..681010
location: region:678545-681010:1
so has part: feature:678545-681010:1:exon
subclass of: SO_0000010

110385336
type: Gene
SIO_000068: ncbigene

position:678545:1
position: 678545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681010:1
position: 681010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678545-681010:1:exon

LOC110385336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC110385336
product: uncharacterized LOC110385336
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038014622.1
SIO_010081: LOC110385336
subclass of: SO_0000673
so part of: LOC110385336
location: join(678545..678818,679522..681010)
location: region:678545-681010:1
so has part: feature:678545-678818:1:exon
so has part: feature:679522-681010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678545-678818:1:exon

position:678818:1
position: 678818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679522-681010:1:exon

position:679522:1
position: 679522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110385336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC110385336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110385336
translation: MTKKKSKLSRETNRSNIKEAQQTFLDLETNLDAEPVIDEPNSKTRPKVTILSEVRFSPYNCAYADLTKMLPQNLKKVDKSYNIFKSESKENLPVIQPEEEFLEYIDYENQMPSTSADNKRLILKKPESCNAKKKIKRDNSDDNSENSDSYSLRDTSEDECFIPSESESCEDFEEQNAQNTVKKCETLRIDSYVLVKFCGPKTNKYYVGKVLDIIDDSGMYVKFMRNRKEEFYWPHIDDISYTVKSDIEIILGIPHEGRRGTLRFDCIDFSKYNVQ
SIO_010081: LOC110385336
subclass of: SO_0000673
so part of: LOC110385336
location: 679557..680384
location: region:679557-680384:1
so has part: feature:679557-680384:1:exon

XP_037870550.1
type: Protein
SIO_000068: ncbiprotein

position:679557:1
position: 679557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680384:1
position: 680384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679557-680384:1:exon

LOC110385337
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(693973..701218)
location: region:693973-701218:-1
so has part: feature:693973-701218:-1:exon
subclass of: SO_0000011

110385337
type: Gene
SIO_000068: ncbigene

position:693973:-1
position: 693973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701218:-1
position: 701218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693973-701218:-1:exon

LOC110385337
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385337
product: uncharacterized LOC110385337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002430630.2
SIO_010081: LOC110385337
subclass of: SO_0000673
so part of: LOC110385337
location: complement(join(693973..697369,699442..699516,701167..701218))
location: region:693973-701218:-1
so has part: feature:701167-701218:-1:exon
so has part: feature:699442-699516:-1:exon
so has part: feature:693973-697369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701167-701218:-1:exon

position:701167:-1
position: 701167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:699442-699516:-1:exon

position:699442:-1
position: 699442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699516:-1
position: 699516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693973-697369:-1:exon

position:697369:-1
position: 697369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101744083
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101744083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 704865..706788
location: region:704865-706788:1
so has part: feature:704865-706788:1:exon
subclass of: SO_0000010

101744083
type: Gene
SIO_000068: ncbigene

position:704865:1
position: 704865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706788:1
position: 706788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704865-706788:1:exon

LOC101744083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101744083
product: uncharacterized LOC101744083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004926910.2
SIO_010081: LOC101744083
subclass of: SO_0000673
so part of: LOC101744083
location: 704865..706788
location: region:704865-706788:1
so has part: feature:704865-706788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704865-706788:1:exon

LOC101744083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101744083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101744083
translation: MNNTNARARIINEIFHAPEEPCYNDFSCYFLGSQNYAEPKYSVTSQRVSFETKPDEPPSFHIDSKPHILFSENVQTNLHEAKHYNCKCENCRRDKCPSKSGRLQKKDNIMQFSDKSTMTSVVKDADCCCNFGKMCNRPDVTNPTSNTGSKIDNLKCLERRCPRTILKNDMSYKCAGRICRTFIDDQIAERDTIDDKEHKIDSQQDLQEKFPSEEVLDQRRTLYNEGISDQIANQFPIAPQRLPSPICVNPEQNRMSVKKYNPKCPIVSKGIPFSHKFQSKYHETCKNTSKSRTNTDFDSEDIKCLVASPDIVKNGMLKSARPLRLPSIKLPRRVLTSERDIELYIDSFHPKSRKRK
SIO_010081: LOC101744083
subclass of: SO_0000673
so part of: LOC101744083
location: 704949..706019
location: region:704949-706019:1
so has part: feature:704949-706019:1:exon

XP_004926967.1
type: Protein
SIO_000068: ncbiprotein

position:704949:1
position: 704949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706019:1
position: 706019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704949-706019:1:exon

Foxg1
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmFOXG1
gene: Foxg1
gene synonym: BmFOXG1
note: forkfead transcription factor G1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(757492..758447)
location: region:757492-758447:-1
so has part: feature:757492-758447:-1:exon
subclass of: SO_0000010

100384886
type: Gene
SIO_000068: ncbigene

position:757492:-1
position: 757492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758447:-1
position: 758447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757492-758447:-1:exon

Foxg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmFOXG1
gene: Foxg1
gene synonym: BmFOXG1
product: forkfead transcription factor G1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001177409.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001177409.1
SIO_010081: Foxg1
subclass of: SO_0000673
so part of: Foxg1
location: complement(757492..758447)
location: region:757492-758447:-1
so has part: feature:757492-758447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757492-758447:-1:exon

Foxg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmFOXG1
gene: Foxg1
gene synonym: BmFOXG1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: forkfead transcription factor G1
translation: MNHAASKAPLSPAPSTEASPSETDLSDSELDVTGTEPVDCSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRRSALTGRARLACFKRPLFPGAAPYPPAAYSQLVGLYSQLLYQRYAPMQMKTMPVAPSAVHPAFRDAVGYSALQYSPSLYDRMPTAPFLGQASLLANTPLAQPQLLTPSPPSLHSPPTSGSSSPELPSPSHHPLSPHIYKPVTVLTRQ
SIO_010081: Foxg1
subclass of: SO_0000673
so part of: Foxg1
location: complement(757492..758382)
location: region:757492-758382:-1
so has part: feature:757492-758382:-1:exon

NP_001170880.1
type: Protein
SIO_000068: ncbiprotein

position:758382:-1
position: 758382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757492-758382:-1:exon

LOC119629291
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(777685..780773)
location: region:777685-780773:-1
so has part: feature:777685-780773:-1:exon
subclass of: SO_0000010

119629291
type: Gene
SIO_000068: ncbigene

position:777685:-1
position: 777685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780773:-1
position: 780773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777685-780773:-1:exon

LOC119629291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629291
product: uncharacterized LOC119629291, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038014608.1
SIO_010081: LOC119629291
subclass of: SO_0000673
so part of: LOC119629291
location: complement(join(777685..779962,780466..780773))
location: region:777685-780773:-1
so has part: feature:780466-780773:-1:exon
so has part: feature:777685-779962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780466-780773:-1:exon

position:780466:-1
position: 780466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777685-779962:-1:exon

position:779962:-1
position: 779962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629291
product: uncharacterized LOC119629291, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038014607.1
SIO_010081: LOC119629291
subclass of: SO_0000673
so part of: LOC119629291
location: complement(join(777685..779968,780466..780772))
location: region:777685-780772:-1
so has part: feature:780466-780772:-1:exon
so has part: feature:777685-779968:-1:exon

position:780772:-1
position: 780772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780466-780772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777685-779968:-1:exon

position:779968:-1
position: 779968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629291
translation: MNREGTHHLMTPSRSRKGSRGEAGPNRSRTRSRSSRTCSRARELELYQERIQRLEQELQQEREMVRRRERSTRRPSAERPLATSLRAATEVRRSDDARHAKVNHERRATHIRSRSPSFSTNDVVKIIQSIKHGPESQPLPQNTPMINKNIDHKNILPNFDPSVKNQRIDVWLKKVNECASVYGWDDRTTIHFSLQKLQGLAKLWFESLDTILYTWQEWQDKLINAFPHELNYGQCLEDMLRRKSKLNEPIEQYYYEKLSLLNLCGISGKRAVDCIIHGISDRTMKSSALALRCSLPENLLQFLMSWDTDQLINDQSHLRNKNASDTESNSKKNSGQGIYCFNCKQQGHPYLQCPKPLDKCNKCGKIGHKTETCFNQEEGSSIGLVVSKNN
SIO_010081: LOC119629291
subclass of: SO_0000673
so part of: LOC119629291
location: complement(778787..779959)
location: region:778787-779959:-1
so has part: feature:778787-779959:-1:exon

XP_037870535.1
type: Protein
SIO_000068: ncbiprotein

position:778787:-1
position: 778787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779959:-1
position: 779959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778787-779959:-1:exon

LOC119629291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629291
translation: MNREGTHHLMTPSRSRKGSRGEAGPNRSRTRSRSSRTCSRARELELYQERIQRLEQELQQEREMVRRRERSTRRPSAERPLATSLRAATEVRRSDDARHAKVNHERRATHIRSRSPSFSTNDVVKIIQSIKHGPESQPLPQNTPMINKNIDHKNILPNFDPSVKNQRIDVWLKKVNECASVYGWDDRTTIHFSLQKLQGLAKLWFESLDTILYTWQEWQDKLINAFPHELNYGQCLEDMLRRKSKLNEPIEQYYYEKLSLLNLCGISGKRAVDCIIHGISDRTMKSSALALRCSLPENLLQFLMSWDTDQLINDQSHLRNKNASDTESNSKKNSGQGIYCFNCKQQGHPYLQCPKPLDKCNKCGKIGHKTETCFNQEEGSSIGLVVSKNN
SIO_010081: LOC119629291
subclass of: SO_0000673
so part of: LOC119629291
location: complement(778787..779959)
location: region:778787-779959:-1
so has part: feature:778787-779959:-1:exon

XP_037870536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:778787-779959:-1:exon

TRNAR-UCG
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: TRNAR-UCG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 851311..851383
location: region:851311-851383:1
so has part: feature:851311-851383:1:exon
subclass of: SO_0000663

110385787
type: Gene
SIO_000068: ncbigene

position:851311:1
position: 851311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851383:1
position: 851383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851311-851383:1:exon

TRNAR-UCG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7091
gene: TRNAR-UCG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:851344..851346,aa:Arg,seq:tcg)
SIO_010081: TRNAR-UCG
subclass of: SO_0000673
so part of: TRNAR-UCG
location: 851311..851383
location: region:851311-851383:1
so has part: feature:851311-851383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:851311-851383:1:exon

LOC110385762
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864857..866466
location: region:864857-866466:1
so has part: feature:864857-866466:1:exon
subclass of: SO_0000011

110385762
type: Gene
SIO_000068: ncbigene

position:864857:1
position: 864857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866466:1
position: 866466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864857-866466:1:exon

LOC110385762
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385762
product: uncharacterized LOC110385762
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002431017.2
SIO_010081: LOC110385762
subclass of: SO_0000673
so part of: LOC110385762
location: join(864857..865010,865183..865281,866059..866466)
location: region:864857-866466:1
so has part: feature:864857-865010:1:exon
so has part: feature:865183-865281:1:exon
so has part: feature:866059-866466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864857-865010:1:exon

position:865010:1
position: 865010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865183-865281:1:exon

position:865183:1
position: 865183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865281:1
position: 865281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866059-866466:1:exon

position:866059:1
position: 866059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110385753
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(875422..895424)
location: region:875422-895424:-1
so has part: feature:875422-895424:-1:exon
subclass of: SO_0000011

110385753
type: Gene
SIO_000068: ncbigene

position:875422:-1
position: 875422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895424:-1
position: 895424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875422-895424:-1:exon

LOC110385753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385753
product: uncharacterized LOC110385753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245321.1
SIO_010081: LOC110385753
subclass of: SO_0000673
so part of: LOC110385753
location: complement(join(875422..875917,876036..876240,885367..887204,891392..895424))
location: region:875422-895424:-1
so has part: feature:891392-895424:-1:exon
so has part: feature:885367-887204:-1:exon
so has part: feature:876036-876240:-1:exon
so has part: feature:875422-875917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891392-895424:-1:exon

position:891392:-1
position: 891392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:885367-887204:-1:exon

position:885367:-1
position: 885367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887204:-1
position: 887204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:876036-876240:-1:exon

position:876036:-1
position: 876036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876240:-1
position: 876240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875422-875917:-1:exon

position:875917:-1
position: 875917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101740791
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(896689..897673)
location: region:896689-897673:-1
so has part: feature:896689-897673:-1:exon
subclass of: SO_0000010

101740791
type: Gene
SIO_000068: ncbigene

position:896689:-1
position: 896689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897673:-1
position: 897673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896689-897673:-1:exon

LOC101740791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740791
product: fork head domain transcription factor slp2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004929336.4
SIO_010081: LOC101740791
subclass of: SO_0000673
so part of: LOC101740791
location: complement(896689..897673)
location: region:896689-897673:-1
so has part: feature:896689-897673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896689-897673:-1:exon

LOC101740791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fork head domain transcription factor slp2
translation: MSPPHSFAIRDILPEALSRSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLAAFKRGALLHPMFGNPYASLVGLYPPLLSVYGRYALPSPLLRLPPPPPSPYHQLYRRLHGLAAPTSPPPEPDHLVKHS
SIO_010081: LOC101740791
subclass of: SO_0000673
so part of: LOC101740791
location: complement(896917..897618)
location: region:896917-897618:-1
so has part: feature:896917-897618:-1:exon

XP_004929393.1
type: Protein
SIO_000068: ncbiprotein

position:896917:-1
position: 896917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897618:-1
position: 897618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896917-897618:-1:exon

LOC119629311
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 900353..906363
location: region:900353-906363:1
so has part: feature:900353-906363:1:exon
subclass of: SO_0000011

119629311
type: Gene
SIO_000068: ncbigene

position:900353:1
position: 900353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906363:1
position: 906363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900353-906363:1:exon

LOC119629311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC119629311
product: uncharacterized LOC119629311, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245338.1
SIO_010081: LOC119629311
subclass of: SO_0000673
so part of: LOC119629311
location: join(900353..900507,903709..903929,905115..905165,905612..906363)
location: region:900353-906363:1
so has part: feature:900353-900507:1:exon
so has part: feature:903709-903929:1:exon
so has part: feature:905115-905165:1:exon
so has part: feature:905612-906363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900353-900507:1:exon

position:900507:1
position: 900507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903709-903929:1:exon

position:903709:1
position: 903709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903929:1
position: 903929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905115-905165:1:exon

position:905115:1
position: 905115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905165:1
position: 905165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:905612-906363:1:exon

position:905612:1
position: 905612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119629311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC119629311
product: uncharacterized LOC119629311, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245336.1
SIO_010081: LOC119629311
subclass of: SO_0000673
so part of: LOC119629311
location: join(900354..900507,903709..903929,905612..905886)
location: region:900354-905886:1
so has part: feature:900354-900507:1:exon
so has part: feature:903709-903929:1:exon
so has part: feature:905612-905886:1:exon

position:900354:1
position: 900354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905886:1
position: 905886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900354-900507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903709-903929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905612-905886:1:exon

LOC119629311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC119629311
product: uncharacterized LOC119629311, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245337.1
SIO_010081: LOC119629311
subclass of: SO_0000673
so part of: LOC119629311
location: join(900354..900507,903709..903929,905115..905516)
location: region:900354-905516:1
so has part: feature:900354-900507:1:exon
so has part: feature:903709-903929:1:exon
so has part: feature:905115-905516:1:exon

position:905516:1
position: 905516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900354-900507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903709-903929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905115-905516:1:exon

LOC101741165
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 921063..921992
location: region:921063-921992:1
so has part: feature:921063-921992:1:exon
subclass of: SO_0000010

101741165
type: Gene
SIO_000068: ncbigene

position:921063:1
position: 921063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921992:1
position: 921992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921063-921992:1:exon

LOC101741165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741165
product: radial spoke head protein 9 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004929339.3
SIO_010081: LOC101741165
subclass of: SO_0000673
so part of: LOC101741165
location: 921063..921992
location: region:921063-921992:1
so has part: feature:921063-921992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921063-921992:1:exon

LOC101741165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: radial spoke head protein 9 homolog
translation: MNIHKLWEYKEYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDALTGKKYFYTTDFQFWSLLPRPKKKYKELSLITTFPFRGDPSLKIKVLDESFEENHPDRCRFMKEENRLAATISNICEEVEICARGQLIKRPDGSITINPNFYGLTATEAKELKSYLHMRPAQHRWNTNLLTRPDYNYSMDFLDSIDQDIPKGCWNLSLEKTGSVAYLKSLYWPGMSYFHKVKTSDAGFLYIGNGRKNLDVPFLI
SIO_010081: LOC101741165
subclass of: SO_0000673
so part of: LOC101741165
location: 921133..921948
location: region:921133-921948:1
so has part: feature:921133-921948:1:exon

XP_004929396.1
type: Protein
SIO_000068: ncbiprotein

position:921133:1
position: 921133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921948:1
position: 921948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921133-921948:1:exon

LOC101740933
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101740933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922094..925011
location: region:922094-925011:1
so has part: feature:922094-925011:1:exon
subclass of: SO_0000010

101740933
type: Gene
SIO_000068: ncbigene

position:922094:1
position: 922094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925011:1
position: 925011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922094-925011:1:exon

LOC101740933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101740933
product: uncharacterized LOC101740933
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_004929337.2
SIO_010081: LOC101740933
subclass of: SO_0000673
so part of: LOC101740933
location: join(922094..922433,922765..925011)
location: region:922094-925011:1
so has part: feature:922094-922433:1:exon
so has part: feature:922765-925011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922094-922433:1:exon

position:922433:1
position: 922433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922765-925011:1:exon

position:922765:1
position: 922765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101740933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101740933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101740933
translation: MSTNGVNTNEDVDMADCDGEKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNKTDFNEDNIYNQNFSGLYCICHRPYPDPDATFEDEMIQCVICEDWLHSTHLEAIVPSSELYSEMICKACMEKNEFLHDYSELAVNVENGEVDILSVDAGNVVISSISCNGDIKEFFENTQVASDKIIHVTESAPGDKTQTAKEIDISNDFIPEKKYIETFNGQVDDVKNVNENIIKTNDKEMNHNDDLNISSKEIEESTNKINSFNTEDINQDTDNDNNTCKDTIVSQSYTLEKETEIECKKITNNEDTTAKEPLEIESRDITHSHEDILQTATEDLSETESRDIANGNEVNVGITEIETENIENTDEDTLETATKELSELTKDIDNEVKPETIPISTKESEVLDQFENMAEITDSTGETLKLIDTNNENSQNITTEISDQNINMLQNNDSAAEEMKIFDSDTETGLNKITEMPVQKEDTSEIKCTSNQELEQFYSNSDAHVKENTEILNITENKIIENGQSTSNGGDNIEDNSQREISAQSKRKFIECTEELPVKKQKSELIHCKRPKGMKKRHKGATFWAPNFRQKLCMCNECVTMYKDLNVLFLIDPEDTVIAYETLGQEKNNGGPSSQYEKGLQALSSLDRIQQINAMTEYNKLRDKLLDFFKSFKDKKEVVKEEDIKAFFAGMKPRREPDGVYFCR
SIO_010081: LOC101740933
subclass of: SO_0000673
so part of: LOC101740933
location: join(922269..922433,922765..924900)
location: region:922269-924900:1
so has part: feature:922269-922433:1:exon
so has part: feature:922765-924900:1:exon

XP_004929394.2
type: Protein
SIO_000068: ncbiprotein

position:922269:1
position: 922269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924900:1
position: 924900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922269-922433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922765-924900:1:exon

LOC101741309
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(925405..928279)
location: region:925405-928279:-1
so has part: feature:925405-928279:-1:exon
subclass of: SO_0000010

101741309
type: Gene
SIO_000068: ncbigene

position:925405:-1
position: 925405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928279:-1
position: 928279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925405-928279:-1:exon

LOC101741309
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741309
product: ubiquitin thioesterase otubain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 52 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_004929340.4
SIO_010081: LOC101741309
subclass of: SO_0000673
so part of: LOC101741309
location: complement(join(925405..925525,925841..925951,926786..927007,927725..928024,928122..928279))
location: region:925405-928279:-1
so has part: feature:928122-928279:-1:exon
so has part: feature:927725-928024:-1:exon
so has part: feature:926786-927007:-1:exon
so has part: feature:925841-925951:-1:exon
so has part: feature:925405-925525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928122-928279:-1:exon

position:928122:-1
position: 928122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927725-928024:-1:exon

position:927725:-1
position: 927725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928024:-1
position: 928024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926786-927007:-1:exon

position:926786:-1
position: 926786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927007:-1
position: 927007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:925841-925951:-1:exon

position:925841:-1
position: 925841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925951:-1
position: 925951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:925405-925525:-1:exon

position:925525:-1
position: 925525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741309
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin thioesterase otubain-like
translation: MADDASSSSGITGNTVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETFMEVIQRVGEHAGSTPDLIETVRMELHDKFNKQGYSDYIVVYLRLITSGQLQTDQEFYQNFIEGPRTVTEFCRQEVEPMYKESDHIHIIALSNALKVCVRVKYMDRGEGSQVIAHDFPEGSTPLVHLLYRPGHYDILYA
SIO_010081: LOC101741309
subclass of: SO_0000673
so part of: LOC101741309
location: complement(join(925439..925525,925841..925951,926786..927007,927725..928024,928122..928229))
location: region:925439-928229:-1
so has part: feature:928122-928229:-1:exon
so has part: feature:927725-928024:-1:exon
so has part: feature:926786-927007:-1:exon
so has part: feature:925841-925951:-1:exon
so has part: feature:925439-925525:-1:exon

XP_004929397.2
type: Protein
SIO_000068: ncbiprotein

position:925439:-1
position: 925439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928229:-1
position: 928229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928122-928229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927725-928024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926786-927007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925841-925951:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925439-925525:-1:exon

LOC101741443
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(928658..935670)
location: region:928658-935670:-1
so has part: feature:928658-935670:-1:exon
subclass of: SO_0000010

101741443
type: Gene
SIO_000068: ncbigene

position:928658:-1
position: 928658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935670:-1
position: 935670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928658-935670:-1:exon

LOC101741443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741443
product: pre-mRNA-splicing factor SPF27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_021350047.2
SIO_010081: LOC101741443
subclass of: SO_0000673
so part of: LOC101741443
location: complement(join(928658..928852,930905..931076,932076..932217,933564..933776,934589..934752,935461..935670))
location: region:928658-935670:-1
so has part: feature:935461-935670:-1:exon
so has part: feature:934589-934752:-1:exon
so has part: feature:933564-933776:-1:exon
so has part: feature:932076-932217:-1:exon
so has part: feature:930905-931076:-1:exon
so has part: feature:928658-928852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935461-935670:-1:exon

position:935461:-1
position: 935461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:934589-934752:-1:exon

position:934589:-1
position: 934589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934752:-1
position: 934752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933564-933776:-1:exon

position:933564:-1
position: 933564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933776:-1
position: 933776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:932076-932217:-1:exon

position:932076:-1
position: 932076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932217:-1
position: 932217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930905-931076:-1:exon

position:930905:-1
position: 930905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931076:-1
position: 931076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:928658-928852:-1:exon

position:928852:-1
position: 928852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101741443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27
translation: MAGEVVVDALPYIDQGYDDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLELQLEYGSEAWRSYLNTLQALVTRAQNEHNQLRKQIGSVNWERKRVQTASGARLRALRRRWAQLVSDNYRLERALLHLQQAKGEVPVEEGEEADLDIVKLPEKLNSETEKEVQKKIEDMFAD
SIO_010081: LOC101741443
subclass of: SO_0000673
so part of: LOC101741443
location: complement(join(930948..931076,932076..932217,933564..933776,934589..934752,935461..935535))
location: region:930948-935535:-1
so has part: feature:935461-935535:-1:exon
so has part: feature:934589-934752:-1:exon
so has part: feature:933564-933776:-1:exon
so has part: feature:932076-932217:-1:exon
so has part: feature:930948-931076:-1:exon

XP_021205722.1
type: Protein
SIO_000068: ncbiprotein

position:930948:-1
position: 930948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935535:-1
position: 935535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935461-935535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934589-934752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933564-933776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932076-932217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930948-931076:-1:exon

LOC101741584
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 936699..938618
location: region:936699-938618:1
so has part: feature:936699-938618:1:exon
subclass of: SO_0000010

101741584
type: Gene
SIO_000068: ncbigene

position:936699:1
position: 936699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938618:1
position: 938618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936699-938618:1:exon

LOC101741584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741584
product: WASH complex subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_004929343.4
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(936699..936844,936979..937108,937266..937430,937814..938618)
location: region:936699-938618:1
so has part: feature:936699-936844:1:exon
so has part: feature:936979-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936699-936844:1:exon

position:936844:1
position: 936844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936979-937108:1:exon

position:936979:1
position: 936979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937108:1
position: 937108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937266-937430:1:exon

position:937266:1
position: 937266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937430:1
position: 937430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937814-938618:1:exon

position:937814:1
position: 937814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101741584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741584
product: WASH complex subunit 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_004929344.4
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(936711..936844,936982..937108,937266..937430,937814..938618)
location: region:936711-938618:1
so has part: feature:936711-936844:1:exon
so has part: feature:936982-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938618:1:exon

position:936711:1
position: 936711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936711-936844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936982-937108:1:exon

position:936982:1
position: 936982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937814-938618:1:exon

LOC101741584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741584
product: WASH complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_004929342.4
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(936731..936891,936979..937108,937266..937430,937814..938618)
location: region:936731-938618:1
so has part: feature:936731-936891:1:exon
so has part: feature:936979-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938618:1:exon

position:936731:1
position: 936731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936731-936891:1:exon

position:936891:1
position: 936891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936979-937108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937814-938618:1:exon

LOC101741584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741584
product: WASH complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_012693093.3
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(936736..936891,936982..937108,937266..937430,937814..938618)
location: region:936736-938618:1
so has part: feature:936736-936891:1:exon
so has part: feature:936982-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938618:1:exon

position:936736:1
position: 936736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936736-936891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936982-937108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937814-938618:1:exon

LOC101741584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 3
translation: MTIQEDLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMTNCEQKLMQFERKLEKVNAAMVLLESKLSSIPELDIPKQTNTSNVTETESTESQNETELQEENLERKLEDQAPAEMKTKPEYDKFVKMVQVGVPLQAVKLKVSLEGLDPEILEQLIK
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(937052..937108,937266..937430,937814..938086)
location: region:937052-938086:1
so has part: feature:937052-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938086:1:exon

XP_004929399.1
type: Protein
SIO_000068: ncbiprotein

position:937052:1
position: 937052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938086:1
position: 938086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937052-937108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937814-938086:1:exon

LOC101741584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 3
translation: MTIQEDLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMTNCEQKLMQFERKLEKVNAAMVLLESKLSSIPELDIPKQTNTSNVTETESTESQNETELQEENLERKLEDQAPAEMKTKPEYDKFVKMVQVGVPLQAVKLKVSLEGLDPEILEQLIK
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(937052..937108,937266..937430,937814..938086)
location: region:937052-938086:1
so has part: feature:937052-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938086:1:exon

XP_004929400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:937052-937108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937814-938086:1:exon

LOC101741584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 3
translation: MTIQEDLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMTNCEQKLMQFERKLEKVNAAMVLLESKLSSIPELDIPKQTNTSNVTETESTESQNETELQEENLERKLEDQAPAEMKTKPEYDKFVKMVQVGVPLQAVKLKVSLEGLDPEILEQLIK
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(937052..937108,937266..937430,937814..938086)
location: region:937052-938086:1
so has part: feature:937052-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938086:1:exon

XP_004929401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:937052-937108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937814-938086:1:exon

LOC101741584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 3
translation: MTIQEDLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMTNCEQKLMQFERKLEKVNAAMVLLESKLSSIPELDIPKQTNTSNVTETESTESQNETELQEENLERKLEDQAPAEMKTKPEYDKFVKMVQVGVPLQAVKLKVSLEGLDPEILEQLIK
SIO_010081: LOC101741584
subclass of: SO_0000673
so part of: LOC101741584
location: join(937052..937108,937266..937430,937814..938086)
location: region:937052-938086:1
so has part: feature:937052-937108:1:exon
so has part: feature:937266-937430:1:exon
so has part: feature:937814-938086:1:exon

XP_012548547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:937052-937108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937266-937430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937814-938086:1:exon

RpL36A
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: RpL36A
note: ribosomal protein L36A; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(939215..940117)
location: region:939215-940117:-1
so has part: feature:939215-940117:-1:exon
subclass of: SO_0000010

778454
type: Gene
SIO_000068: ncbigene

position:939215:-1
position: 939215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940117:-1
position: 940117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939215-940117:-1:exon

RpL36A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: RpL36A
product: ribosomal protein L36A
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001098283.1
SIO_010081: RpL36A
subclass of: SO_0000673
so part of: RpL36A
location: complement(join(939215..939381,939777..939950,940094..940117))
location: region:939215-940117:-1
so has part: feature:940094-940117:-1:exon
so has part: feature:939777-939950:-1:exon
so has part: feature:939215-939381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940094-940117:-1:exon

position:940094:-1
position: 940094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939777-939950:-1:exon

position:939777:-1
position: 939777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939950:-1
position: 939950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939215-939381:-1:exon

position:939381:-1
position: 939381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RpL36A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: RpL36A
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ribosomal protein L36A
translation: MVNVPKQRRTYCKKCKCHKVHKVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKKAKTTKKIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF
SIO_010081: RpL36A
subclass of: SO_0000673
so part of: RpL36A
location: complement(join(939244..939381,939777..939950,940094..940096))
location: region:939244-940096:-1
so has part: feature:940094-940096:-1:exon
so has part: feature:939777-939950:-1:exon
so has part: feature:939244-939381:-1:exon

NP_001091753.1
type: Protein
SIO_000068: ncbiprotein

position:939244:-1
position: 939244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940096:-1
position: 940096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940094-940096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939777-939950:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939244-939381:-1:exon

LOC101741922
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101741922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 941614..946129
location: region:941614-946129:1
so has part: feature:941614-946129:1:exon
subclass of: SO_0000010

101741922
type: Gene
SIO_000068: ncbigene

position:941614:1
position: 941614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946129:1
position: 946129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941614-946129:1:exon

LOC101741922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101741922
product: chromatin assembly factor 1 subunit B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_004929345.4
SIO_010081: LOC101741922
subclass of: SO_0000673
so part of: LOC101741922
location: join(941614..941911,942048..942275,942762..942970,943322..943588,943963..944175,944958..945097,945556..946129)
location: region:941614-946129:1
so has part: feature:941614-941911:1:exon
so has part: feature:942048-942275:1:exon
so has part: feature:942762-942970:1:exon
so has part: feature:943322-943588:1:exon
so has part: feature:943963-944175:1:exon
so has part: feature:944958-945097:1:exon
so has part: feature:945556-946129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941614-941911:1:exon

position:941911:1
position: 941911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942048-942275:1:exon

position:942048:1
position: 942048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942275:1
position: 942275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:942762-942970:1:exon

position:942762:1
position: 942762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942970:1
position: 942970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943322-943588:1:exon

position:943322:1
position: 943322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943588:1
position: 943588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:943963-944175:1:exon

position:943963:1
position: 943963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944175:1
position: 944175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:944958-945097:1:exon

position:944958:1
position: 944958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945097:1
position: 945097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:945556-946129:1:exon

position:945556:1
position: 945556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101741922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101741922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin assembly factor 1 subunit B
translation: MKFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGLQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTKKVVSRSSKASLPFPTDHPLHGSRQRLYHDDTLQTYYRRLQFSPDGLYIAVPAGRVEPEGKPDVKPINAVYIYTRYCLKIPVCVVPCGEPALVTRWSPIGFRPRAAGPAPRLPSPSGARHVLAVGTRRSVLVYDTQQKTPIAIVANVHYTRLTDLTWSNNGRILVASSTDGFCSIITFNNEELGEPLPLEPNTENKPEPMETQDEKPAAQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMDSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLEIKSKQNTSPKDNQFFRQAKVTDVKQPIAATVSSPKAPRRVSFVTLSSPKNAKKK
SIO_010081: LOC101741922
subclass of: SO_0000673
so part of: LOC101741922
location: join(941783..941911,942048..942275,942762..942970,943322..943588,943963..944175,944958..945097,945556..946061)
location: region:941783-946061:1
so has part: feature:941783-941911:1:exon
so has part: feature:942048-942275:1:exon
so has part: feature:942762-942970:1:exon
so has part: feature:943322-943588:1:exon
so has part: feature:943963-944175:1:exon
so has part: feature:944958-945097:1:exon
so has part: feature:945556-946061:1:exon

XP_004929402.1
type: Protein
SIO_000068: ncbiprotein

position:941783:1
position: 941783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946061:1
position: 946061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941783-941911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942048-942275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942762-942970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943322-943588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:943963-944175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944958-945097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:945556-946061:1:exon

LOC101742428
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946748..962670)
location: region:946748-962670:-1
so has part: feature:946748-962670:-1:exon
subclass of: SO_0000010

101742428
type: Gene
SIO_000068: ncbigene

position:946748:-1
position: 946748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962670:-1
position: 962670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946748-962670:-1:exon

LOC101742428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742428
product: transportin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_038014566.1
SIO_010081: LOC101742428
subclass of: SO_0000673
so part of: LOC101742428
location: complement(join(946748..948998,949445..949688,949763..949950,952225..952545,952620..952864,952984..953139,955066..955282,959635..959798,960618..960797,961392..962282,962393..962670))
location: region:946748-962670:-1
so has part: feature:962393-962670:-1:exon
so has part: feature:961392-962282:-1:exon
so has part: feature:960618-960797:-1:exon
so has part: feature:959635-959798:-1:exon
so has part: feature:955066-955282:-1:exon
so has part: feature:952984-953139:-1:exon
so has part: feature:952620-952864:-1:exon
so has part: feature:952225-952545:-1:exon
so has part: feature:949763-949950:-1:exon
so has part: feature:949445-949688:-1:exon
so has part: feature:946748-948998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962393-962670:-1:exon

position:962393:-1
position: 962393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961392-962282:-1:exon

position:961392:-1
position: 961392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962282:-1
position: 962282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960618-960797:-1:exon

position:960618:-1
position: 960618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960797:-1
position: 960797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:959635-959798:-1:exon

position:959635:-1
position: 959635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959798:-1
position: 959798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955066-955282:-1:exon

position:955066:-1
position: 955066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955282:-1
position: 955282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:952984-953139:-1:exon

position:952984:-1
position: 952984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953139:-1
position: 953139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:952620-952864:-1:exon

position:952620:-1
position: 952620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952864:-1
position: 952864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952225-952545:-1:exon

position:952225:-1
position: 952225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952545:-1
position: 952545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:949763-949950:-1:exon

position:949763:-1
position: 949763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949950:-1
position: 949950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:949445-949688:-1:exon

position:949445:-1
position: 949445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949688:-1
position: 949688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:946748-948998:-1:exon

position:948998:-1
position: 948998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-3
translation: MDAPSMDTVYQAISALYDGPNGNEIEKASLWLADVQKSIHSWKIADELLQQKKDFNSCYFAAQTMRAKIQHNLSELPAESHVPLRDTLIAHLERTTPDTTSSILTQLSLALADLALQMPSWQDCISDLIKLFSNKEYLLLEILTLLPQEIDSSNLKLGENRREDIKSQLRLNSQTVMLFLKQCLNNSQGSTNVGLKSIKCMTSWLQVRAVNLHEIPQNTVIGYSLQVLRDHNSINTLHDASSDCICALLQCLEEVNDHENIDRLLFDSVVALEESYHLAVAHEEEEKVSNYARVFTELAESFLMKIIDCTDNGNTHFAMKSLELALVCVGYHDYEVAEITFNLWYRLSEEVYRRDHQPLTDAFKPHIERLIEALARHCQCEPDLTQLPDETDDFYEFRQKVMSLIKDVVFIVGSSSVFRQMFAALQSNISWEQTEAALFVMQSVARNILPDEYEYVPKVVEAILSMPSSSHLGVRATCILLLGELADWVERHAASCLAPCVAMLLAALPQPRLALPAATALQNICKACPGGAAEHIGKLLGAVQALDQLAAPPPAAAALMRAVAPVVASLPPDQMSAALCEASAPQLEGLRRLCSARQPIKRGTTSDPVLYLDRLAALYRDLTLSADLKNVAASETHPCLPALTEAWPVLIDVMDKFGGEERVMERVCRAARFGVRAARGAGAALLPALCGALAQLYPRHAHSCVLYLCSVLVDELAARPGCAAALAGLLADLLPPAFALLQRDHGFRDHPDTVDDLFRLFIRFLQRMPVQLLSCGVMGSILQCACSAAALDHRDASASLMNFLADFARLANTAHPDTAEAQHAKALAEELVVTYGGALTAAVLEASVLHLHRGLVPGAADVLLELARAERRHGAAWLGAAVRQLPARHTAAATLLQAQHFHNTARSTEKSKEMTKLLRDFAKLYR
SIO_010081: LOC101742428
subclass of: SO_0000673
so part of: LOC101742428
location: complement(join(948938..948998,949445..949688,949763..949950,952225..952545,952620..952864,952984..953139,955066..955282,959635..959798,960618..960797,961392..962282,962393..962506))
location: region:948938-962506:-1
so has part: feature:962393-962506:-1:exon
so has part: feature:961392-962282:-1:exon
so has part: feature:960618-960797:-1:exon
so has part: feature:959635-959798:-1:exon
so has part: feature:955066-955282:-1:exon
so has part: feature:952984-953139:-1:exon
so has part: feature:952620-952864:-1:exon
so has part: feature:952225-952545:-1:exon
so has part: feature:949763-949950:-1:exon
so has part: feature:949445-949688:-1:exon
so has part: feature:948938-948998:-1:exon

XP_037870494.1
type: Protein
SIO_000068: ncbiprotein

position:948938:-1
position: 948938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962506:-1
position: 962506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962393-962506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961392-962282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960618-960797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:959635-959798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955066-955282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952984-953139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952620-952864:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952225-952545:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:949763-949950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:949445-949688:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:948938-948998:-1:exon

LOC732921
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC732921
note: peroxiredoxin; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <963708..969263
location: region:963708-969263:1
so has part: feature:963708-969263:1:exon
subclass of: SO_0000010

732921
type: Gene
SIO_000068: ncbigene

position:963708:1
position: 963708
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:969263:1
position: 969263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963708-969263:1:exon

LOC732921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC732921
product: peroxiredoxin
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001046921.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution and aligns at 98% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001046921.1
SIO_010081: LOC732921
subclass of: SO_0000673
so part of: LOC732921
location: join(<963708..963810,964039..964211,964281..964547,968429..969263)
location: region:963708-969263:1
so has part: feature:963708-963810:1:exon
so has part: feature:964039-964211:1:exon
so has part: feature:964281-964547:1:exon
so has part: feature:968429-969263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963708-963810:1:exon

position:963810:1
position: 963810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964039-964211:1:exon

position:964039:1
position: 964039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964211:1
position: 964211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964281-964547:1:exon

position:964281:1
position: 964281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964547:1
position: 964547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968429-969263:1:exon

position:968429:1
position: 968429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC732921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC732921
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: peroxiredoxin
translation: MFLTGSSIIRGITAFTNRASARALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK
SIO_010081: LOC732921
subclass of: SO_0000673
so part of: LOC732921
location: join(964107..964211,964281..964547,968429..968623)
location: region:964107-968623:1
so has part: feature:964107-964211:1:exon
so has part: feature:964281-964547:1:exon
so has part: feature:968429-968623:1:exon

NP_001040386.1
type: Protein
SIO_000068: ncbiprotein

position:964107:1
position: 964107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968623:1
position: 968623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964107-964211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964281-964547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968429-968623:1:exon

LOC101742572
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 972601..1018666
location: region:972601-1018666:1
so has part: feature:972601-1018666:1:exon
subclass of: SO_0000010

101742572
type: Gene
SIO_000068: ncbigene

position:972601:1
position: 972601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018666:1
position: 1018666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972601-1018666:1:exon

LOC101742572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742572
product: apoptosis-resistant E3 ubiquitin protein ligase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038014394.1
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972601..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013751..1014011)
location: region:972601-1014011:1
so has part: feature:972601-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013751-1014011:1:exon

position:1014011:1
position: 1014011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972601-973002:1:exon

position:973002:1
position: 973002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

position:988944:1
position: 988944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989109:1
position: 989109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

position:996929:1
position: 996929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997137:1
position: 997137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

position:997495:1
position: 997495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997634:1
position: 997634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

position:998029:1
position: 998029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998169:1
position: 998169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

position:999070:1
position: 999070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999178:1
position: 999178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

position:999841:1
position: 999841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000028:1
position: 1000028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

position:1000732:1
position: 1000732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000930:1
position: 1000930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

position:1001770:1
position: 1001770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001966:1
position: 1001966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

position:1002099:1
position: 1002099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002275:1
position: 1002275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

position:1002602:1
position: 1002602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002779:1
position: 1002779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

position:1007422:1
position: 1007422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007567:1
position: 1007567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

position:1011151:1
position: 1011151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011294:1
position: 1011294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

position:1011415:1
position: 1011415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011588:1
position: 1011588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1013751-1014011:1:exon

position:1013751:1
position: 1013751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742572
product: apoptosis-resistant E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014392.1
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972602..973002,973085..974077,974240..974968,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1018666)
location: region:972602-1018666:1
so has part: feature:972602-973002:1:exon
so has part: feature:973085-974077:1:exon
so has part: feature:974240-974968:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1018666:1:exon

position:972602:1
position: 972602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972602-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:973085-974077:1:exon

position:973085:1
position: 973085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974077:1
position: 974077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974240-974968:1:exon

position:974240:1
position: 974240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974968:1
position: 974968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1013514-1013666:1:exon

position:1013514:1
position: 1013514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013666:1
position: 1013666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1015079-1015273:1:exon

position:1015079:1
position: 1015079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015273:1
position: 1015273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1015807-1018666:1:exon

position:1015807:1
position: 1015807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742572
product: apoptosis-resistant E3 ubiquitin protein ligase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038014393.1
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972602..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1013751..1014010)
location: region:972602-1014010:1
so has part: feature:972602-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1013751-1014010:1:exon

position:1014010:1
position: 1014010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972602-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1013751-1014010:1:exon

LOC101742572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742572
product: apoptosis-resistant E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038014391.1
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972605..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1018666)
location: region:972605-1018666:1
so has part: feature:972605-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1018666:1:exon

position:972605:1
position: 972605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972605-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1015079-1015273:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1015807-1018666:1:exon

LOC101742572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742572
product: apoptosis-resistant E3 ubiquitin protein ligase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038014395.1
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972606..973002,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1018666)
location: region:972606-1018666:1
so has part: feature:972606-973002:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1018666:1:exon

position:972606:1
position: 972606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972606-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1015079-1015273:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1015807-1018666:1:exon

LOC101742572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1
translation: MISRNLFSCSNFFITMLVVFSITILASFVLCQIIVDESVLVDDWLDQNELGEYKQLFREHGISTLSGCGTPDQLDRLPELPAAEEKRLRRAAQVLQQRLVLRQWLSTHKLQHVYTKLLSLDVTSLEDVYWLEDTTARHVLDPKDFGSWSAARHSLPTGKEALQTLKMELWSTVVKNSKHQDAWTWGGMLIVSVSVCGLVTLAAMTQPSLAPEAKHSLLQYVTGKYLHPPSCRVEWGWEEPQVVGETMCFTVLCYQRNGQPYPICDTDELAVSISHGTRKVQAVIELGCGDPAQANVARVQFTVRTAGVYLISVTIGGAGVCDSPYRKWFVAGRVEARRSRVRRPLAALVWTARSPRALHIHPRDRYDNPAPAPPQPHAGFSIKINTLTGELDEKLSSSAVFQYDSVNQRVTMTLCFPNAGVYKAAIYYEDVLLHNGQFDCIVLTPSDAATVQRNLSSRRHNITFEARLLSPGRPRRVLCCLNPKQLIVKDYMFKFIPKRITSFRLCPSTKLIMEPAGGAAGGAAEGGGEVCVEDGVQEAVRLQCAQRDLLAACFTHLLLDNCGGEDSFKNKQEFFYSEMRKAHSKHPHDKLSLRVTRADLIRSSLKATKHFTVADWCKNFDVSFQGEQGVDWGGVRREWFTQVCAQLFDARRALFVPFSDAPAALVHPNPARPPHLKLKHFEFAGKMVGKCLYESALGGSYRQLVRARLTRSFRAQLIGLRVHYKYFEQDDPELYLSKIKYILETDLDAAEPELELYFVEEEYDGAGQLVNTCELVPDGARTRVRNSTKLQYLDLVAQRRLAARTRAETDAFLRGLTLLVPDNLLAIFDENELELLVCGTGEACAADWRAHALVCGAGRDWERLVGWFWAALSNFSTEERARLLQFTTGCSQLPPGGFQELNPRFQLSPAPTSGALPTAHTCFNQLCLPHYDSYEQLVRALLWAINEGGEGFGMI
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972822..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1015977)
location: region:972822-1015977:1
so has part: feature:972822-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1015977:1:exon

XP_037870319.1
type: Protein
SIO_000068: ncbiprotein

position:972822:1
position: 972822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015977:1
position: 1015977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972822-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1015079-1015273:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1015807-1015977:1:exon

LOC101742572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X3
translation: MISRNLFSCSNFFITMLVVFSITILASFVLCQIIVDESVLVDDWLDQNELGEYKQLFREHGISTLSGCGTPDQLDRLPELPAAEEKRLRRAAQVLQQRLVLRQWLSTHKLQHVYTKLLSLDVTSLEDVYWLEDTTARHVLDPKDFGSWSAARHSLPTGKEALQTLKMELWSTVVKNSKHQDAWTWGGMLIVSVSVCGLVTLAAMTQPSLAPEAKHSLLQYVTGKYLHPPSCRVEWGWEEPQVVGETMCFTVLCYQRNGQPYPICDTDELAVSISHGTRKVQAVIELGCGDPAQANVARVQFTVRTAGVYLISVTIGGAGVCDSPYRKWFVAGRVEARRSRVRRPLAALVWTARSPRALHIHPRDRYDNPAPAPPQPHAGFSIKINTLTGELDEKLSSSAVFQYDSVNQRVTMTLCFPNAGVYKAAIYYEDVLLHNGQFDCIVLTPSDAATVQRNLSSRRHNITFEARLLSPGRPRRVLCCLNPKQLIVKDYMFKFIPKRITSFRLCPSTKLIMEPAGGAAGGAAEGGGEVCVEDGVQEAVRLQCAQRDLLAACFTHLLLDNCGGEDSFKNKQEFFYSEMRKAHSKHPHDKLSLRVTRADLIRSSLKATKHFTVADWCKNFDVSFQGEQGVDWGGVRREWFTQVCAQLFDARRALFVPFSDAPAALVHPNPARPPHLKLKHFEFAGKMVGKCLYESALGGSYRQLVRARLTRSFRAQLIGLRVHYKYFEQDDPELYLSKIKYILETDLDAAEPELELYFVEEEYDGAGQLVNTCELVPDGARTRVRNSTKLQYLDLVAQRRLAARTRAETDAFLRGLTLLVPDNLLAIFDENELELLVCGTGEACAADWRAHALVCGAGRGCGAWGAGRGVWGGGAGRGGTRRG
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972822..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1013751..1013900)
location: region:972822-1013900:1
so has part: feature:972822-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1013751-1013900:1:exon

XP_037870321.1
type: Protein
SIO_000068: ncbiprotein

position:1013900:1
position: 1013900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972822-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1013751-1013900:1:exon

LOC101742572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X4
translation: MISRNLFSCSNFFITMLVVFSITILASFVLCQIIVDESVLVDDWLDQNELGEYKQLFREHGISTLSGCGTPDQLDRLPELPAAEEKRLRRAAQVLQQRLVLRQWLSTHKLQHVYTKLLSLDVTSLEDVYWLEDTTARHVLDPKDFGSWSAARHSLPTGKEALQTLKMELWSTVVKNSKHQDAWTWGGMLIVSVSVCGLVTLAAMTQPSLAPEAKHSLLQYVTGKYLHPPSCRVEWGWEEPQVVGETMCFTVLCYQRNGQPYPICDTDELAVSISHGTRKVQAVIELGCGDPAQANVARVQFTVRTAGVYLISVTIGGAGVCDSPYRKWFVAGRVEARRSRVRRPLAALVWTARSPRALHIHPRDRYDNPAPAPPQPHAGFSIKINTLTGELDEKLSSSAVFQYDSVNQRVTMTLCFPNAGVYKAAIYYEDVLLHNGQFDCIVLTPSDAATVQRNLSSRRHNITFEARLLSPGRPRRVLCCLNPKQLIVKDYMFKFIPKRITSFRLCPSTKLIMEPAGGAAGGAAEGGGEVCVEDGVQEAVRLQCAQRDLLAACFTHLLLDNCGGEDSFKNKQEFFYSEMRKAHSKHPHDKLSLRVTRADLIRSSLKATKHFTVADWCKNFDVSFQGEQGVDWGGVRREWFTQVCAQLFDARRALFVPFSDAPAALVHPNPARPPHLKLKHFEFAGKMVGKCLYESALGGSYRQLVRARLTRSFRAQLIGLRVHYKYFEQDDPELYLSKIKYILETDLDAAEPELELYFVEEEYDGAGQLVNTCELVPDGARTRLLVCGTGEACAADWRAHALVCGAGRGCGAWGAGRGVWGGGAGRGGTRRG
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(972822..973002,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013751..1013900)
location: region:972822-1013900:1
so has part: feature:972822-973002:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013751-1013900:1:exon

XP_037870322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972822-973002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013751-1013900:1:exon

LOC101742572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X2
translation: MWQFEDSEIYSIGMIHPSHSRHSGLSMLSGVSQFSGISTLSGCGTPDQLDRLPELPAAEEKRLRRAAQVLQQRLVLRQWLSTHKLQHVYTKLLSLDVTSLEDVYWLEDTTARHVLDPKDFGSWSAARHSLPTGKEALQTLKMELWSTVVKNSKHQDAWTWGGMLIVSVSVCGLVTLAAMTQPSLAPEAKHSLLQYVTGKYLHPPSCRVEWGWEEPQVVGETMCFTVLCYQRNGQPYPICDTDELAVSISHGTRKVQAVIELGCGDPAQANVARVQFTVRTAGVYLISVTIGGAGVCDSPYRKWFVAGRVEARRSRVRRPLAALVWTARSPRALHIHPRDRYDNPAPAPPQPHAGFSIKINTLTGELDEKLSSSAVFQYDSVNQRVTMTLCFPNAGVYKAAIYYEDVLLHNGQFDCIVLTPSDAATVQRNLSSRRHNITFEARLLSPGRPRRVLCCLNPKQLIVKDYMFKFIPKRITSFRLCPSTKLIMEPAGGAAGGAAEGGGEVCVEDGVQEAVRLQCAQRDLLAACFTHLLLDNCGGEDSFKNKQEFFYSEMRKAHSKHPHDKLSLRVTRADLIRSSLKATKHFTVADWCKNFDVSFQGEQGVDWGGVRREWFTQVCAQLFDARRALFVPFSDAPAALVHPNPARPPHLKLKHFEFAGKMVGKCLYESALGGSYRQLVRARLTRSFRAQLIGLRVHYKYFEQDDPELYLSKIKYILETDLDAAEPELELYFVEEEYDGAGQLVNTCELVPDGARTRVRNSTKLQYLDLVAQRRLAARTRAETDAFLRGLTLLVPDNLLAIFDENELELLVCGTGEACAADWRAHALVCGAGRDWERLVGWFWAALSNFSTEERARLLQFTTGCSQLPPGGFQELNPRFQLSPAPTSGALPTAHTCFNQLCLPHYDSYEQLVRALLWAINEGGEGFGMI
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(974863..974968,988944..989109,996929..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1015977)
location: region:974863-1015977:1
so has part: feature:974863-974968:1:exon
so has part: feature:988944-989109:1:exon
so has part: feature:996929-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1015977:1:exon

XP_037870320.1
type: Protein
SIO_000068: ncbiprotein

position:974863:1
position: 974863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974863-974968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988944-989109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996929-997137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1015079-1015273:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1015807-1015977:1:exon

LOC101742572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X5
translation: MELWSTVVKNSKHQDAWTWGGMLIVSVSVCGLVTLAAMTQPSLAPEAKHSLLQYVTGKYLHPPSCRVEWGWEEPQVVGETMCFTVLCYQRNGQPYPICDTDELAVSISHGTRKVQAVIELGCGDPAQANVARVQFTVRTAGVYLISVTIGGAGVCDSPYRKWFVAGRVEARRSRVRRPLAALVWTARSPRALHIHPRDRYDNPAPAPPQPHAGFSIKINTLTGELDEKLSSSAVFQYDSVNQRVTMTLCFPNAGVYKAAIYYEDVLLHNGQFDCIVLTPSDAATVQRNLSSRRHNITFEARLLSPGRPRRVLCCLNPKQLIVKDYMFKFIPKRITSFRLCPSTKLIMEPAGGAAGGAAEGGGEVCVEDGVQEAVRLQCAQRDLLAACFTHLLLDNCGGEDSFKNKQEFFYSEMRKAHSKHPHDKLSLRVTRADLIRSSLKATKHFTVADWCKNFDVSFQGEQGVDWGGVRREWFTQVCAQLFDARRALFVPFSDAPAALVHPNPARPPHLKLKHFEFAGKMVGKCLYESALGGSYRQLVRARLTRSFRAQLIGLRVHYKYFEQDDPELYLSKIKYILETDLDAAEPELELYFVEEEYDGAGQLVNTCELVPDGARTRVRNSTKLQYLDLVAQRRLAARTRAETDAFLRGLTLLVPDNLLAIFDENELELLVCGTGEACAADWRAHALVCGAGRDWERLVGWFWAALSNFSTEERARLLQFTTGCSQLPPGGFQELNPRFQLSPAPTSGALPTAHTCFNQLCLPHYDSYEQLVRALLWAINEGGEGFGMI
SIO_010081: LOC101742572
subclass of: SO_0000673
so part of: LOC101742572
location: join(997080..997137,997495..997634,998029..998169,999070..999178,999841..1000028,1000732..1000930,1001770..1001966,1002099..1002275,1002602..1002779,1007422..1007567,1011151..1011294,1011415..1011588,1013514..1013666,1015079..1015273,1015807..1015977)
location: region:997080-1015977:1
so has part: feature:997080-997137:1:exon
so has part: feature:997495-997634:1:exon
so has part: feature:998029-998169:1:exon
so has part: feature:999070-999178:1:exon
so has part: feature:999841-1000028:1:exon
so has part: feature:1000732-1000930:1:exon
so has part: feature:1001770-1001966:1:exon
so has part: feature:1002099-1002275:1:exon
so has part: feature:1002602-1002779:1:exon
so has part: feature:1007422-1007567:1:exon
so has part: feature:1011151-1011294:1:exon
so has part: feature:1011415-1011588:1:exon
so has part: feature:1013514-1013666:1:exon
so has part: feature:1015079-1015273:1:exon
so has part: feature:1015807-1015977:1:exon

XP_037870323.1
type: Protein
SIO_000068: ncbiprotein

position:997080:1
position: 997080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997080-997137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997495-997634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998029-998169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999070-999178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999841-1000028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1000732-1000930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1001770-1001966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1002099-1002275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1002602-1002779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1007422-1007567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1011151-1011294:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1011415-1011588:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1013514-1013666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1015079-1015273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1015807-1015977:1:exon

LOC101742066
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1021376..1034128)
location: region:1021376-1034128:-1
so has part: feature:1021376-1034128:-1:exon
subclass of: SO_0000010

101742066
type: Gene
SIO_000068: ncbigene

position:1021376:-1
position: 1021376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034128:-1
position: 1034128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021376-1034128:-1:exon

LOC101742066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742066
product: uncharacterized LOC101742066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_004929346.4
SIO_010081: LOC101742066
subclass of: SO_0000673
so part of: LOC101742066
location: complement(join(1021376..1021707,1022544..1022723,1023493..1023635,1025596..1025693,1027175..1027238,1029390..1029542,1029997..1030147,1031187..1031408,1033924..1034128))
location: region:1021376-1034128:-1
so has part: feature:1033924-1034128:-1:exon
so has part: feature:1031187-1031408:-1:exon
so has part: feature:1029997-1030147:-1:exon
so has part: feature:1029390-1029542:-1:exon
so has part: feature:1027175-1027238:-1:exon
so has part: feature:1025596-1025693:-1:exon
so has part: feature:1023493-1023635:-1:exon
so has part: feature:1022544-1022723:-1:exon
so has part: feature:1021376-1021707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033924-1034128:-1:exon

position:1033924:-1
position: 1033924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031187-1031408:-1:exon

position:1031187:-1
position: 1031187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031408:-1
position: 1031408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029997-1030147:-1:exon

position:1029997:-1
position: 1029997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030147:-1
position: 1030147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029390-1029542:-1:exon

position:1029390:-1
position: 1029390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029542:-1
position: 1029542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1027175-1027238:-1:exon

position:1027175:-1
position: 1027175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027238:-1
position: 1027238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025596-1025693:-1:exon

position:1025596:-1
position: 1025596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025693:-1
position: 1025693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023493-1023635:-1:exon

position:1023493:-1
position: 1023493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023635:-1
position: 1023635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022544-1022723:-1:exon

position:1022544:-1
position: 1022544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022723:-1
position: 1022723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1021376-1021707:-1:exon

position:1021707:-1
position: 1021707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742066
translation: MPENSPKMARSASPVARAGAGDISERELFRERHNLQTTPPARLQRLHPKKQLFLTPVNKFTAKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKKDKEVHLVRPALRGIVEERAAARVGRFMLVTAWRRRRDEVRCLRKTLEFQVSCSERLRMQVSALKSLLDSDNVKVRLAMRELDRLKQLLKDKDIEKAVLEREKRALEEDVIAAEDKASQLSIDCRNARNELQAAGARADRTLAAERARRDRALRALSLMEQQLVQRKDLLSTVESQLATLRREAEEKQKVLEETFQKLEMEQLARECSTRECSELSARVSMAAAETCTLRRVVEQLKEHLTRLELDLKMTREQLDWWPRPLTKMLGVARSWLRCPMSMPEALLWSMLPARSGC
SIO_010081: LOC101742066
subclass of: SO_0000673
so part of: LOC101742066
location: complement(join(1021614..1021707,1022544..1022723,1023493..1023635,1025596..1025693,1027175..1027238,1029390..1029542,1029997..1030147,1031187..1031408,1033924..1034045))
location: region:1021614-1034045:-1
so has part: feature:1033924-1034045:-1:exon
so has part: feature:1031187-1031408:-1:exon
so has part: feature:1029997-1030147:-1:exon
so has part: feature:1029390-1029542:-1:exon
so has part: feature:1027175-1027238:-1:exon
so has part: feature:1025596-1025693:-1:exon
so has part: feature:1023493-1023635:-1:exon
so has part: feature:1022544-1022723:-1:exon
so has part: feature:1021614-1021707:-1:exon

XP_004929403.1
type: Protein
SIO_000068: ncbiprotein

position:1021614:-1
position: 1021614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034045:-1
position: 1034045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033924-1034045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031187-1031408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029997-1030147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029390-1029542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027175-1027238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025596-1025693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023493-1023635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022544-1022723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021614-1021707:-1:exon

Dorsal
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
note: embryonic polarity protein dorsal; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 1030917..1082372
location: region:1030917-1082372:1
so has part: feature:1030917-1082372:1:exon
subclass of: SO_0000010

692440
type: Gene
SIO_000068: ncbigene

position:1030917:1
position: 1030917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082372:1
position: 1082372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030917-1082372:1:exon

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_038014263.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1030917..1031091,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072209)
location: region:1030917-1072209:1
so has part: feature:1030917-1031091:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072209:1:exon

position:1072209:1
position: 1072209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030917-1031091:1:exon

position:1031091:1
position: 1031091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

position:1061914:1
position: 1061914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061988:1
position: 1061988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

position:1062631:1
position: 1062631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062769:1
position: 1062769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

position:1067646:1
position: 1067646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067798:1
position: 1067798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

position:1068876:1
position: 1068876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069060:1
position: 1069060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

position:1070124:1
position: 1070124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070353:1
position: 1070353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

position:1070654:1
position: 1070654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070809:1
position: 1070809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1072209:1:exon

position:1070884:1
position: 1070884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_038014266.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1030924..1031091,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1082372)
location: region:1030924-1082372:1
so has part: feature:1030924-1031091:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1082372:1:exon

position:1030924:1
position: 1030924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030924-1031091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1070962:1:exon

position:1070962:1
position: 1070962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1072217-1072285:1:exon

position:1072217:1
position: 1072217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072285:1
position: 1072285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1076511-1076552:1:exon

position:1076511:1
position: 1076511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076552:1
position: 1076552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1076888-1076946:1:exon

position:1076888:1
position: 1076888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076946:1
position: 1076946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1078457-1078804:1:exon

position:1078457:1
position: 1078457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078804:1
position: 1078804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1079547-1082372:1:exon

position:1079547:1
position: 1079547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic polarity protein dorsal isoform X4
translation: MSLVSARNISYMRSAPPYLRNKDAGLPIGIAEQNDPNQPNELNINDVFEAISLADPTFGEGPPPVALENMASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPAVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRDSNYILGKKRKTKMPLMAAYEQERTFQEQMPIKAEPREKSPHHATSPYGAYPPYSDPNWMVPPEQMRTIPDLAVPAATNMDTFADMAWSNVPYGQGLQPLQPGANVMHSPHSLSPMHRGQSVSPMQDPQCGSPMHGGPCVSPMHGGACVSPMVGPMMQVGSTSPNMQHNTYNHLPQGAEADGAGTTFSAQFLDREPILNSSEFRSLLGGDGNMLSADLNKLSTSDLLL
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1031025..1031091,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1079714)
location: region:1031025-1079714:1
so has part: feature:1031025-1031091:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1079714:1:exon

XP_037870194.1
type: Protein
SIO_000068: ncbiprotein

position:1031025:1
position: 1031025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079714:1
position: 1079714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031025-1031091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1070962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072217-1072285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076511-1076552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076888-1076946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078457-1078804:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079547-1079714:1:exon

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic polarity protein dorsal isoform X1
translation: MSLVSARNISYMRSAPPYLRNKDAGLPIGIAEQNDPNQPNELNINDVFEAISLADPTFGEGPPPVALENMASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPAVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRGTTRRKPPPDLSFLSLLLAEKRDTNNNNKDEAVSVPSSPDPVPSPPPPDPEPAAAETNGHAEPHEKSLDDLLEQVAELDEIYSESRSRLQRAADAADAETDADDFNDAGTYTSLQLAFKNPLPIAEPEPPPYEDVHVQTFRGPIVEFTPLKRDTDEAPPLPPKRVRKSVSSEFRSSQTSVESAARPARLPPPDEKLSAARSEPALPPAKKRSFFSRLFRRRDKSPAPSVQEARARPVGRSVSSVSGQRPARWAAGGAAGGAGGGLRAADSVTHVSLHEDVSVCAAPPADAILVAESVLALDASSFRRLQDELELTEAEHYALYMALAPRATASEFDDQSSYYSPLDGSNFLRQ
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1031025..1031091,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072023)
location: region:1031025-1072023:1
so has part: feature:1031025-1031091:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072023:1:exon

XP_037870191.1
type: Protein
SIO_000068: ncbiprotein

position:1072023:1
position: 1072023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031025-1031091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1072023:1:exon

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant B
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001043431.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 10 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001043431.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037357..1037929,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1079859)
location: region:1037357-1079859:1
so has part: feature:1037357-1037929:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1079859:1:exon

position:1037357:1
position: 1037357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079859:1
position: 1079859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037357-1037929:1:exon

position:1037929:1
position: 1037929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1070962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072217-1072285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076511-1076552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076888-1076946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078457-1078804:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079547-1079859:1:exon

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant A
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001172825.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 10 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001172825.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037357..1037688,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1079859)
location: region:1037357-1079859:1
so has part: feature:1037357-1037688:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1079859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037357-1037688:1:exon

position:1037688:1
position: 1037688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1070962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072217-1072285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076511-1076552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076888-1076946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078457-1078804:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079547-1079859:1:exon

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_038014264.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037364..1037929,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072209)
location: region:1037364-1072209:1
so has part: feature:1037364-1037929:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072209:1:exon

position:1037364:1
position: 1037364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037364-1037929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1072209:1:exon

Dorsal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
product: embryonic polarity protein dorsal, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_038014265.1
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037368..1037688,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072209)
location: region:1037368-1072209:1
so has part: feature:1037368-1037688:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072209:1:exon

position:1037368:1
position: 1037368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037368-1037688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1072209:1:exon

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
inference: similar to AA sequence (same species):RefSeq:NP_001036896.1
exception: annotated by transcript or proteomic data
note: isoform B is encoded by transcript variant B; The RefSeq protein has 3 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: embryonic polarity protein dorsal isoform B
translation: MDIGGDAGLPIGIAEQNDPNQPNELNINDVFEAISLADPTFGEGPPPVALENMASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPTVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRDSNYILGKKRKTKMPLMAAYEQERTFQEQMPIKAEPREKSPHHATSPYGAYPPYSDPNWMVPPEQMRTIPDLAVPAATNMDTFADMAWSNVPYGQGLQPLQPGANVMHSPHSLSPMHRGQSVSPMQDSQCGSPMHGGPCVSPMHGGACVSPMVGPMMQVGSTSPNMQHNTYSHLPQGAEADGAGTTFSAQFLDREPILNSSEFRSLLGGDGNMLSADLNKLSTSDLLL
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037914..1037929,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1079714)
location: region:1037914-1079714:1
so has part: feature:1037914-1037929:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1079714:1:exon

NP_001036896.1
type: Protein
SIO_000068: ncbiprotein

position:1037914:1
position: 1037914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037914-1037929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1070962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072217-1072285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076511-1076552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076888-1076946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078457-1078804:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079547-1079714:1:exon

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic polarity protein dorsal isoform X2
translation: MDIGGDAGLPIGIAEQNDPNQPNELNINDVFEAISLADPTFGEGPPPVALENMASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPAVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRGTTRRKPPPDLSFLSLLLAEKRDTNNNNKDEAVSVPSSPDPVPSPPPPDPEPAAAETNGHAEPHEKSLDDLLEQVAELDEIYSESRSRLQRAADAADAETDADDFNDAGTYTSLQLAFKNPLPIAEPEPPPYEDVHVQTFRGPIVEFTPLKRDTDEAPPLPPKRVRKSVSSEFRSSQTSVESAARPARLPPPDEKLSAARSEPALPPAKKRSFFSRLFRRRDKSPAPSVQEARARPVGRSVSSVSGQRPARWAAGGAAGGAGGGLRAADSVTHVSLHEDVSVCAAPPADAILVAESVLALDASSFRRLQDELELTEAEHYALYMALAPRATASEFDDQSSYYSPLDGSNFLRQ
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1037914..1037929,1061914..1061988,1062631..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072023)
location: region:1037914-1072023:1
so has part: feature:1037914-1037929:1:exon
so has part: feature:1061914-1061988:1:exon
so has part: feature:1062631-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072023:1:exon

XP_037870192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1037914-1037929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061914-1061988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062631-1062769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1070884-1072023:1:exon

LOC119629230
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1037929..1040317)
location: region:1037929-1040317:-1
so has part: feature:1037929-1040317:-1:exon
subclass of: SO_0000011

119629230
type: Gene
SIO_000068: ncbigene

position:1037929:-1
position: 1037929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040317:-1
position: 1040317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037929-1040317:-1:exon

LOC119629230
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC119629230
product: uncharacterized LOC119629230
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005245287.1
SIO_010081: LOC119629230
subclass of: SO_0000673
so part of: LOC119629230
location: complement(join(1037929..1038252,1038332..1039266,1040017..1040317))
location: region:1037929-1040317:-1
so has part: feature:1040017-1040317:-1:exon
so has part: feature:1038332-1039266:-1:exon
so has part: feature:1037929-1038252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1040017-1040317:-1:exon

position:1040017:-1
position: 1040017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1038332-1039266:-1:exon

position:1038332:-1
position: 1038332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039266:-1
position: 1039266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037929-1038252:-1:exon

position:1038252:-1
position: 1038252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629317
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629317
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1045024..1045179
location: region:1045024-1045179:1
so has part: feature:1045024-1045179:1:exon
subclass of: SO_0000623

119629317
type: Gene
SIO_000068: ncbigene

position:1045024:1
position: 1045024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045179:1
position: 1045179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045024-1045179:1:exon

LOC119629317
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: snRNA
gene: LOC119629317
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005245344.1
SIO_010081: LOC119629317
subclass of: SO_0000673
so part of: LOC119629317
location: 1045024..1045179
location: region:1045024-1045179:1
so has part: feature:1045024-1045179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045024-1045179:1:exon

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
inference: similar to AA sequence (same species):RefSeq:NP_001166296.1
exception: annotated by transcript or proteomic data
note: isoform A is encoded by transcript variant A; The RefSeq protein has 3 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: embryonic polarity protein dorsal isoform A
translation: MASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPTVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRDSNYILGKKRKTKMPLMAAYEQERTFQEQMPIKAEPREKSPHHATSPYGAYPPYSDPNWMVPPEQMRTIPDLAVPAATNMDTFADMAWSNVPYGQGLQPLQPGANVMHSPHSLSPMHRGQSVSPMQDSQCGSPMHGGPCVSPMHGGACVSPMVGPMMQVGSTSPNMQHNTYSHLPQGAEADGAGTTFSAQFLDREPILNSSEFRSLLGGDGNMLSADLNKLSTSDLLL
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1062696..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1070962,1072217..1072285,1076511..1076552,1076888..1076946,1078457..1078804,1079547..1079714)
location: region:1062696-1079714:1
so has part: feature:1062696-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1070962:1:exon
so has part: feature:1072217-1072285:1:exon
so has part: feature:1076511-1076552:1:exon
so has part: feature:1076888-1076946:1:exon
so has part: feature:1078457-1078804:1:exon
so has part: feature:1079547-1079714:1:exon

NP_001166296.1
type: Protein
SIO_000068: ncbiprotein

position:1062696:1
position: 1062696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062696-1062769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070884-1070962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072217-1072285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1076511-1076552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076888-1076946:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078457-1078804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079547-1079714:1:exon

Dorsal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmRel
alternative label: Rel
gene: Dorsal
gene synonym: BmRel; Rel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic polarity protein dorsal isoform X3
translation: MASQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKDPPFKPHPHNLVGRERCDRGVCSVRTDVTEDNNEYQFRNLGIQCVKRKDIVAELRLREELRVDPFRTGFDHRSHTQSIDLNAVRLAFQVFVPDGAGRMRRPLPAVVSDIIYDKKAMSDLLIMRSSHCSGTIRGGTQVILLCEKVSKEDTAVIFYQEVNEQIVWEETVTPSYVHKQVAVVFNTPPYRDPQRDEHVTVHFQLKRLTDDARSNSFAFEYIPDFRGTTRRKPPPDLSFLSLLLAEKRDTNNNNKDEAVSVPSSPDPVPSPPPPDPEPAAAETNGHAEPHEKSLDDLLEQVAELDEIYSESRSRLQRAADAADAETDADDFNDAGTYTSLQLAFKNPLPIAEPEPPPYEDVHVQTFRGPIVEFTPLKRDTDEAPPLPPKRVRKSVSSEFRSSQTSVESAARPARLPPPDEKLSAARSEPALPPAKKRSFFSRLFRRRDKSPAPSVQEARARPVGRSVSSVSGQRPARWAAGGAAGGAGGGLRAADSVTHVSLHEDVSVCAAPPADAILVAESVLALDASSFRRLQDELELTEAEHYALYMALAPRATASEFDDQSSYYSPLDGSNFLRQ
SIO_010081: Dorsal
subclass of: SO_0000673
so part of: Dorsal
location: join(1062696..1062769,1067646..1067798,1068876..1069060,1070124..1070353,1070654..1070809,1070884..1072023)
location: region:1062696-1072023:1
so has part: feature:1062696-1062769:1:exon
so has part: feature:1067646-1067798:1:exon
so has part: feature:1068876-1069060:1:exon
so has part: feature:1070124-1070353:1:exon
so has part: feature:1070654-1070809:1:exon
so has part: feature:1070884-1072023:1:exon

XP_037870193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1062696-1062769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067646-1067798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068876-1069060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070124-1070353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070654-1070809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070884-1072023:1:exon

LOC101742222
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1088369..1089961
location: region:1088369-1089961:1
so has part: feature:1088369-1089961:1:exon
subclass of: SO_0000010

101742222
type: Gene
SIO_000068: ncbigene

position:1088369:1
position: 1088369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089961:1
position: 1089961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088369-1089961:1:exon

LOC101742222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742222
product: uncharacterized LOC101742222
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_004929347.4
SIO_010081: LOC101742222
subclass of: SO_0000673
so part of: LOC101742222
location: join(1088369..1088623,1088940..1089050,1089192..1089961)
location: region:1088369-1089961:1
so has part: feature:1088369-1088623:1:exon
so has part: feature:1088940-1089050:1:exon
so has part: feature:1089192-1089961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088369-1088623:1:exon

position:1088623:1
position: 1088623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088940-1089050:1:exon

position:1088940:1
position: 1088940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089050:1
position: 1089050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1089192-1089961:1:exon

position:1089192:1
position: 1089192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742222
translation: MNESFLNPIPEPKKIGVWAEGTHIEAKEFMIPNKSPESTDDIPTIPDLDDLQDILEKEISSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLAEEYQEGNSN
SIO_010081: LOC101742222
subclass of: SO_0000673
so part of: LOC101742222
location: join(1088544..1088623,1088940..1089050,1089192..1089399)
location: region:1088544-1089399:1
so has part: feature:1088544-1088623:1:exon
so has part: feature:1088940-1089050:1:exon
so has part: feature:1089192-1089399:1:exon

XP_004929404.1
type: Protein
SIO_000068: ncbiprotein

position:1088544:1
position: 1088544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089399:1
position: 1089399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088544-1088623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088940-1089050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1089192-1089399:1:exon

LOC101742356
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1090390..1093237)
location: region:1090390-1093237:-1
so has part: feature:1090390-1093237:-1:exon
subclass of: SO_0000010

101742356
type: Gene
SIO_000068: ncbigene

position:1090390:-1
position: 1090390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093237:-1
position: 1093237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090390-1093237:-1:exon

LOC101742356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742356
product: gamma-secretase subunit Aph-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_004929348.4
SIO_010081: LOC101742356
subclass of: SO_0000673
so part of: LOC101742356
location: complement(join(1090390..1092218,1092500..1092673,1092834..1093237))
location: region:1090390-1093237:-1
so has part: feature:1092834-1093237:-1:exon
so has part: feature:1092500-1092673:-1:exon
so has part: feature:1090390-1092218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092834-1093237:-1:exon

position:1092834:-1
position: 1092834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1092500-1092673:-1:exon

position:1092500:-1
position: 1092500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092673:-1
position: 1092673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1090390-1092218:-1:exon

position:1092218:-1
position: 1092218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit Aph-1
translation: MTLAEFFSCSLLAFGAPIVMFAMTVATDPVRIIIMIAAAFGWLLSFLLSSLVWYAVVPLRSYLVFGMIFAIIFQELFRYGMYLLLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIIFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELYAASILPSYIVLMITSYIAFRCAGGSSKTFIQSFSARS
SIO_010081: LOC101742356
subclass of: SO_0000673
so part of: LOC101742356
location: complement(join(1091892..1092218,1092500..1092673,1092834..1093055))
location: region:1091892-1093055:-1
so has part: feature:1092834-1093055:-1:exon
so has part: feature:1092500-1092673:-1:exon
so has part: feature:1091892-1092218:-1:exon

XP_004929405.1
type: Protein
SIO_000068: ncbiprotein

position:1091892:-1
position: 1091892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093055:-1
position: 1093055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092834-1093055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092500-1092673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091892-1092218:-1:exon

LOC101742508
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1093805..1097408
location: region:1093805-1097408:1
so has part: feature:1093805-1097408:1:exon
subclass of: SO_0000010

101742508
type: Gene
SIO_000068: ncbigene

position:1093805:1
position: 1093805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097408:1
position: 1097408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093805-1097408:1:exon

LOC101742508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742508
product: ATPase family protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_004929349.4
SIO_010081: LOC101742508
subclass of: SO_0000673
so part of: LOC101742508
location: join(1093805..1094319,1094734..1097408)
location: region:1093805-1097408:1
so has part: feature:1093805-1094319:1:exon
so has part: feature:1094734-1097408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093805-1094319:1:exon

position:1094319:1
position: 1094319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094734-1097408:1:exon

position:1094734:1
position: 1094734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101742508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase family protein 2 homolog
translation: MPPKQAKKTLWVECEKCGCSVTSNDKNVHTELNCAKDQVKCPFIYNGELNTWLERTGSPADGIPRDAVMVHPSAGSLINAVIGGALQLTREGAPAMLKRMWPSKTSSPAAVILPAADIPASWKNENKKITVAVLQENVSEATEVIIKIKNNKIKTDICDILKHHFYKNYVAVGTILVYYYFGKRLEIEVITVKSKDESDNSSKDWFVLSNETIWSMSKESEPKTQKKPISLGGVDDIVEEIQTYIKISFNEAGLKASFQPTRGLLIYGHSGIGKTAICKYLIENFKCFHVEINGPAIFSKYFGETENTMKSLFDKAVNNQPSIILVDEIETICPRRSSGSTEQERRITSAFVSFLDSLHDENCKVFVLATTRKPEAIDPMLRRFGRLDKEIEIPVPDRVRRKDILYSLLKNLPNQMSSQDIETISDIAHGYVAADIVNLCTQAAMKCIKRSAKNIEKEDLIAAVTIVRPSAMRELLIEVPNIRWADIGGMADLKLKLRQAVEWPLKHAESFKRLGVKPPGGVLMYGPPGCSKTMIAKALATESGLNFLSIKGPELFSKWVGESERAVRDLFTKARQVAPSVIFFDEMDAIGGERGAGEAGVHERVLAQLLTELDGVVPLNSVTILAATNRPDRMDRALLRPGRLDRLIYVPLPDIETRLQILELKLQTMSIGDDVNPHALASRTEGFSGAELNALCQEAALRALEKDLDCAEVTMTYFEDVLRNFKPRTPHTLLKVYEEFCLG
SIO_010081: LOC101742508
subclass of: SO_0000673
so part of: LOC101742508
location: join(1093971..1094319,1094734..1096616)
location: region:1093971-1096616:1
so has part: feature:1093971-1094319:1:exon
so has part: feature:1094734-1096616:1:exon

XP_004929406.1
type: Protein
SIO_000068: ncbiprotein

position:1093971:1
position: 1093971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096616:1
position: 1096616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093971-1094319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094734-1096616:1:exon

LOC101736941
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101736941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1096692..1105220)
location: region:1096692-1105220:-1
so has part: feature:1096692-1105220:-1:exon
subclass of: SO_0000010

101736941
type: Gene
SIO_000068: ncbigene

position:1096692:-1
position: 1096692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105220:-1
position: 1105220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096692-1105220:-1:exon

LOC101736941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101736941
product: DDB1- and CUL4-associated factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_038014473.1
SIO_010081: LOC101736941
subclass of: SO_0000673
so part of: LOC101736941
location: complement(join(1096692..1099212,1100411..1100592,1101387..1101512,1102559..1102809,1103328..1103463,1104263..1104365,1104781..1104863,1105027..1105220))
location: region:1096692-1105220:-1
so has part: feature:1105027-1105220:-1:exon
so has part: feature:1104781-1104863:-1:exon
so has part: feature:1104263-1104365:-1:exon
so has part: feature:1103328-1103463:-1:exon
so has part: feature:1102559-1102809:-1:exon
so has part: feature:1101387-1101512:-1:exon
so has part: feature:1100411-1100592:-1:exon
so has part: feature:1096692-1099212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105027-1105220:-1:exon

position:1105027:-1
position: 1105027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104781-1104863:-1:exon

position:1104781:-1
position: 1104781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104863:-1
position: 1104863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104263-1104365:-1:exon

position:1104263:-1
position: 1104263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104365:-1
position: 1104365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103328-1103463:-1:exon

position:1103328:-1
position: 1103328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103463:-1
position: 1103463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1102559-1102809:-1:exon

position:1102559:-1
position: 1102559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102809:-1
position: 1102809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1101387-1101512:-1:exon

position:1101387:-1
position: 1101387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101512:-1
position: 1101512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100411-1100592:-1:exon

position:1100411:-1
position: 1100411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100592:-1
position: 1100592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1096692-1099212:-1:exon

position:1099212:-1
position: 1099212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101736941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101736941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 7
translation: MSMPHSSSSTSSGTKRKEIYKYQAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRIWRAGEPYTLFECVLNNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNRHAEILRV
SIO_010081: LOC101736941
subclass of: SO_0000673
so part of: LOC101736941
location: complement(join(1099014..1099212,1100411..1100592,1101387..1101512,1102559..1102809,1103328..1103463,1104263..1104365,1104781..1104842))
location: region:1099014-1104842:-1
so has part: feature:1104781-1104842:-1:exon
so has part: feature:1104263-1104365:-1:exon
so has part: feature:1103328-1103463:-1:exon
so has part: feature:1102559-1102809:-1:exon
so has part: feature:1101387-1101512:-1:exon
so has part: feature:1100411-1100592:-1:exon
so has part: feature:1099014-1099212:-1:exon

XP_037870401.1
type: Protein
SIO_000068: ncbiprotein

position:1099014:-1
position: 1099014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104842:-1
position: 1104842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104781-1104842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104263-1104365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103328-1103463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102559-1102809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1101387-1101512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100411-1100592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099014-1099212:-1:exon

LOC101742646
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1121998..1123078)
location: region:1121998-1123078:-1
so has part: feature:1121998-1123078:-1:exon
subclass of: SO_0000011

101742646
type: Gene
SIO_000068: ncbigene

position:1121998:-1
position: 1121998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123078:-1
position: 1123078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121998-1123078:-1:exon

LOC101742646
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC101742646
product: uncharacterized LOC101742646, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_002430998.2
SIO_010081: LOC101742646
subclass of: SO_0000673
so part of: LOC101742646
location: complement(join(1121998..1122294,1122743..1123078))
location: region:1121998-1123078:-1
so has part: feature:1122743-1123078:-1:exon
so has part: feature:1121998-1122294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122743-1123078:-1:exon

position:1122743:-1
position: 1122743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1121998-1122294:-1:exon

position:1122294:-1
position: 1122294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742646
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC101742646
product: uncharacterized LOC101742646, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_001139882.3
SIO_010081: LOC101742646
subclass of: SO_0000673
so part of: LOC101742646
location: complement(join(1121998..1122294,1122731..1123078))
location: region:1121998-1123078:-1
so has part: feature:1122731-1123078:-1:exon
so has part: feature:1121998-1122294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122731-1123078:-1:exon

position:1122731:-1
position: 1122731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1121998-1122294:-1:exon

CPH28
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmorCPH28
gene: CPH28
gene synonym: BmorCPH28
note: cuticular protein hypothetical 28; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1132598..1193359
location: region:1132598-1193359:1
so has part: feature:1132598-1193359:1:exon
subclass of: SO_0000010

100379468
type: Gene
SIO_000068: ncbigene

position:1132598:1
position: 1132598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193359:1
position: 1193359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132598-1193359:1:exon

CPH28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmorCPH28
gene: CPH28
gene synonym: BmorCPH28
product: cuticular protein hypothetical 28
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001173278.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173278.1
SIO_010081: CPH28
subclass of: SO_0000673
so part of: CPH28
location: join(1132598..1132686,1189117..1189239,1190985..1191164,1191823..1193359)
location: region:1132598-1193359:1
so has part: feature:1132598-1132686:1:exon
so has part: feature:1189117-1189239:1:exon
so has part: feature:1190985-1191164:1:exon
so has part: feature:1191823-1193359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132598-1132686:1:exon

position:1132686:1
position: 1132686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189117-1189239:1:exon

position:1189117:1
position: 1189117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189239:1
position: 1189239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1190985-1191164:1:exon

position:1190985:1
position: 1190985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191164:1
position: 1191164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1191823-1193359:1:exon

position:1191823:1
position: 1191823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPH28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmorCPH28
gene: CPH28
gene synonym: BmorCPH28
inference: similar to AA sequence (same species):RefSeq:NP_001166749.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cuticular protein hypothetical 28 precursor
translation: MAAKFYVLCVLLATGIAAGARPRPRLQQVEDSYDYENQAQDSRAGGQVYQLVPADQYDSIYRQNDRQDEEYEQRPVQRLPSRQKLQPQPQQEGPKQPPVQTIRNYNKVNDDGSFTFGYEAADGSFKEETRGTDCVVRGKYGYIDPDGNKREFTYVSGNPCDPNKPNEEDEPEAPAPDSAERDDGVPNYPTRVAPRPTTPRPPTTFFQNDFRDADEDEDDEPVQAIQPVRQRVVQRPALRRPAYQPQPIAITPRPLPVTTARALPPATTFRPQLLQITPKPQIQYSPEPHYSPSPSPIATTARPGPGQIDFAAEFAKFHRENQLQGSTSATAASPTKATAASPSPSGNPLYSTELVYDPSSGQYNTQLFQTLPQTKGELNLNLRLQPFVAQQQSQPRPFVPSPQIPAVPSSPASSAPLYRQQLQNPQEVYQRQQAEQQFQNSQQLFAQQQQLQQSQLQRDRAAARAQAQRLAAQGQAAPAPQRASPAPQYYYVAPRGGESVSSGQIDAFLRGHGIQF
SIO_010081: CPH28
subclass of: SO_0000673
so part of: CPH28
location: join(1132669..1132686,1189117..1189239,1190985..1191164,1191823..1193052)
location: region:1132669-1193052:1
so has part: feature:1132669-1132686:1:exon
so has part: feature:1189117-1189239:1:exon
so has part: feature:1190985-1191164:1:exon
so has part: feature:1191823-1193052:1:exon

NP_001166749.1
type: Protein
SIO_000068: ncbiprotein

position:1132669:1
position: 1132669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193052:1
position: 1193052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132669-1132686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189117-1189239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190985-1191164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1191823-1193052:1:exon

CPH28
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 7091
alternative label: BmorCPH28
gene: CPH28
gene synonym: BmorCPH28
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CPH28
subclass of: SO_0000673
so part of: CPH28
location: join(1132669..1132686,1189117..1189155)
location: region:1132669-1189155:1
so has part: feature:1132669-1132686:1:exon
so has part: feature:1189117-1189155:1:exon

position:1189155:1
position: 1189155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132669-1132686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189117-1189155:1:exon

LOC110385760
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC110385760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1146880..1152516)
location: region:1146880-1152516:-1
so has part: feature:1146880-1152516:-1:exon
subclass of: SO_0000011

110385760
type: Gene
SIO_000068: ncbigene

position:1146880:-1
position: 1146880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152516:-1
position: 1152516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146880-1152516:-1:exon

LOC110385760
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7091
nc RNA class: lncRNA
gene: LOC110385760
product: uncharacterized LOC110385760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002431015.2
SIO_010081: LOC110385760
subclass of: SO_0000673
so part of: LOC110385760
location: complement(join(1146880..1147098,1150885..1152516))
location: region:1146880-1152516:-1
so has part: feature:1150885-1152516:-1:exon
so has part: feature:1146880-1147098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150885-1152516:-1:exon

position:1150885:-1
position: 1150885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146880-1147098:-1:exon

position:1147098:-1
position: 1147098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101737072
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101737072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1198045..1201344
location: region:1198045-1201344:1
so has part: feature:1198045-1201344:1:exon
subclass of: SO_0000010

101737072
type: Gene
SIO_000068: ncbigene

position:1198045:1
position: 1198045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201344:1
position: 1201344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198045-1201344:1:exon

LOC101737072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737072
product: uncharacterized LOC101737072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014277.1
SIO_010081: LOC101737072
subclass of: SO_0000673
so part of: LOC101737072
location: 1198045..1201344
location: region:1198045-1201344:1
so has part: feature:1198045-1201344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198045-1201344:1:exon

LOC101737072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101737072
translation: MMLLLLIACVAVTTAENATKDSTEPPSNTTKEILKASETADASKVEIVKQIRRLNDDGSYTIGYEADDGTFKIESRDVRGNVKGTFGYIDKDGEIKRVTYSSSGESTPIPVTTTTTTTQSSPTMIVRVNKTVSSTTRRPLATVVYPTRSSFTTRGTVIQSIPRRRGSSTRPPNTTESTTEQQNLEDTTSSILNLYKPKVEENIRTRTQILKPMSDILKDDLVTRQTTTKLPQTVKPVYEHVTEKAPESVLKMNTFRRELPSTTTNPHMINLQQSAGDDSTDEYGSQLSLGTIRPLFTTTTPRPRLVPIQSIVAARQRIQQRYQDAPLDDQETTIEASTGRVFDSQGVVTSNPLPVVHIPAQREPDDRAYQQTVYRRPPAVQFRTREYLRDNPGAAVPIGNQRPFLHYEYEKVLEPQYDKEPVQTLQKPEPTAASYDTRPVTRIVPIPVDERGVPIPGYQARFANAYRPQPALFQPRYESVDDMHSISAPVSTRDLRRLLYILILRQNRLQALVDQMMPGSAYPMPIYRDSYRYQNRYEDDGYDYRYDPKYRNDYMQPMYENQYENHRYLPRRRMYPRPYDTAGSASNHIEEVPEFLPPEVREALLLKMLILAISPDFAPTPVPPTELTTAAPMRKQVRNVQILGEEGPMTDKQRH
SIO_010081: LOC101737072
subclass of: SO_0000673
so part of: LOC101737072
location: 1199149..1201116
location: region:1199149-1201116:1
so has part: feature:1199149-1201116:1:exon

XP_037870205.1
type: Protein
SIO_000068: ncbiprotein

position:1199149:1
position: 1199149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201116:1
position: 1201116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199149-1201116:1:exon

CPR54
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmorCPR54
gene: CPR54
gene synonym: BmorCPR54
note: cuticular protein RR-1 motif 54; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1205268..1223723)
location: region:1205268-1223723:-1
so has part: feature:1205268-1223723:-1:exon
subclass of: SO_0000010

100379417
type: Gene
SIO_000068: ncbigene

position:1205268:-1
position: 1205268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223723:-1
position: 1223723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205268-1223723:-1:exon

CPR54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmorCPR54
gene: CPR54
gene synonym: BmorCPR54
product: cuticular protein RR-1 motif 54
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001173232.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 7 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173232.1
SIO_010081: CPR54
subclass of: SO_0000673
so part of: CPR54
location: complement(join(1205268..1205626,1206271..1206525,1207603..1207731,1208893..1209016,1209559..1209680,1223693..1223723))
location: region:1205268-1223723:-1
so has part: feature:1223693-1223723:-1:exon
so has part: feature:1209559-1209680:-1:exon
so has part: feature:1208893-1209016:-1:exon
so has part: feature:1207603-1207731:-1:exon
so has part: feature:1206271-1206525:-1:exon
so has part: feature:1205268-1205626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223693-1223723:-1:exon

position:1223693:-1
position: 1223693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209559-1209680:-1:exon

position:1209559:-1
position: 1209559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209680:-1
position: 1209680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208893-1209016:-1:exon

position:1208893:-1
position: 1208893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209016:-1
position: 1209016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207603-1207731:-1:exon

position:1207603:-1
position: 1207603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207731:-1
position: 1207731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1206271-1206525:-1:exon

position:1206271:-1
position: 1206271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206525:-1
position: 1206525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1205268-1205626:-1:exon

position:1205626:-1
position: 1205626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPR54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmorCPR54
gene: CPR54
gene synonym: BmorCPR54
inference: similar to AA sequence (same species):RefSeq:NP_001166703.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cuticular protein RR-1 motif 54 precursor
translation: MTPFARLAFLGLIACAVAQYNEDRAPRYIATEPKEVSTPVPILKQINRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGKLRVIEYGANKYGFQPAGEGITVAPPTLVDESTRDEGLRPGKSQGGRSQYRAPAPQPDYDYEEPAPAPPPRPRPQPQPQPQYRAPAPRPQPQPQQQYRPAPQPQQQYRPNPQPQQQYRPEQSAAPTPPKPAFFSGAAPAPVENNFFEPEPAPRPRPKQDFRPAPQFQSFAPAQDFAPSPPQQQRYTTANQFPQQKSQPYSMLDQLLKEYSLPQGGAAPLHDITFGSY
SIO_010081: CPR54
subclass of: SO_0000673
so part of: CPR54
location: complement(join(1205330..1205626,1206271..1206525,1207603..1207731,1208893..1209016,1209559..1209680,1223693..1223713))
location: region:1205330-1223713:-1
so has part: feature:1223693-1223713:-1:exon
so has part: feature:1209559-1209680:-1:exon
so has part: feature:1208893-1209016:-1:exon
so has part: feature:1207603-1207731:-1:exon
so has part: feature:1206271-1206525:-1:exon
so has part: feature:1205330-1205626:-1:exon

NP_001166703.1
type: Protein
SIO_000068: ncbiprotein

position:1205330:-1
position: 1205330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223713:-1
position: 1223713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223693-1223713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1209559-1209680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208893-1209016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207603-1207731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1206271-1206525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1205330-1205626:-1:exon

CPR54
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 7091
alternative label: BmorCPR54
gene: CPR54
gene synonym: BmorCPR54
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CPR54
subclass of: SO_0000673
so part of: CPR54
location: complement(join(1209648..1209680,1223693..1223713))
location: region:1209648-1223713:-1
so has part: feature:1223693-1223713:-1:exon
so has part: feature:1209648-1209680:-1:exon

position:1209648:-1
position: 1209648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223693-1223713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1209648-1209680:-1:exon

CPR55
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmorCPR55
gene: CPR55
gene synonym: BmorCPR55
note: cuticular protein RR-1 motif 55; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1239213..1256047)
location: region:1239213-1256047:-1
so has part: feature:1239213-1256047:-1:exon
subclass of: SO_0000010

100379416
type: Gene
SIO_000068: ncbigene

position:1239213:-1
position: 1239213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256047:-1
position: 1256047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239213-1256047:-1:exon

CPR55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmorCPR55
gene: CPR55
gene synonym: BmorCPR55
product: cuticular protein RR-1 motif 55
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001173231.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173231.1
SIO_010081: CPR55
subclass of: SO_0000673
so part of: CPR55
location: complement(join(1239213..1239790,1241725..1241995,1255959..1256047))
location: region:1239213-1256047:-1
so has part: feature:1255959-1256047:-1:exon
so has part: feature:1241725-1241995:-1:exon
so has part: feature:1239213-1239790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1255959-1256047:-1:exon

position:1255959:-1
position: 1255959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241725-1241995:-1:exon

position:1241725:-1
position: 1241725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241995:-1
position: 1241995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1239213-1239790:-1:exon

position:1239790:-1
position: 1239790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPR55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmorCPR55
gene: CPR55
gene synonym: BmorCPR55
inference: similar to AA sequence (same species):RefSeq:NP_001166702.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cuticular protein RR-1 motif 55 precursor
translation: MFVLKTLVFCSAWLLIQGQGSNVPATTPVPILKQINRQNDDGSYSYGYEAADGSFKIETKYPNGDVAGKYGYIDESGKQREISYGASSARGFEPQGAGIMVPPPTLHEPSSNALTDGQEDDGQYREDPKIYEDPKYNGRQSAKPAQGFRQFQQPAQPAQPEPQYQRQQYQSFQSSFPAQPQYQPQPQYQQPQSQYQQAQYQPQPQSQSQYRSPLFSQQSNLFNQAPQQFPQSQVYHQQPQFSYQAFTPQPSSQFQSQNYQAQSNPFNGHPAQNFDPSTGSYSINFTG
SIO_010081: CPR55
subclass of: SO_0000673
so part of: CPR55
location: complement(join(1239213..1239790,1241725..1241995,1255959..1255973))
location: region:1239213-1255973:-1
so has part: feature:1255959-1255973:-1:exon
so has part: feature:1241725-1241995:-1:exon
so has part: feature:1239213-1239790:-1:exon

NP_001166702.1
type: Protein
SIO_000068: ncbiprotein

position:1255973:-1
position: 1255973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255959-1255973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241725-1241995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239213-1239790:-1:exon

CPR55
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 7091
alternative label: BmorCPR55
gene: CPR55
gene synonym: BmorCPR55
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CPR55
subclass of: SO_0000673
so part of: CPR55
location: complement(join(1241957..1241995,1255959..1255973))
location: region:1241957-1255973:-1
so has part: feature:1255959-1255973:-1:exon
so has part: feature:1241957-1241995:-1:exon

position:1241957:-1
position: 1241957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255959-1255973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241957-1241995:-1:exon

LOC101742798
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1270330..1276900)
location: region:1270330-1276900:-1
so has part: feature:1270330-1276900:-1:exon
subclass of: SO_0000010

101742798
type: Gene
SIO_000068: ncbigene

position:1270330:-1
position: 1270330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276900:-1
position: 1276900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270330-1276900:-1:exon

LOC101742798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742798
product: protein mothers against dpp
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_004929350.4
SIO_010081: LOC101742798
subclass of: SO_0000673
so part of: LOC101742798
location: complement(join(1270330..1271837,1272841..1273002,1276256..1276900))
location: region:1270330-1276900:-1
so has part: feature:1276256-1276900:-1:exon
so has part: feature:1272841-1273002:-1:exon
so has part: feature:1270330-1271837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276256-1276900:-1:exon

position:1276256:-1
position: 1276256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1272841-1273002:-1:exon

position:1272841:-1
position: 1272841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273002:-1
position: 1273002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1270330-1271837:-1:exon

position:1271837:-1
position: 1271837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mothers against dpp
translation: MDTDDGESSSSGPMSSLNSLFSFTSPAVKKLLGWKQGDEEEKWAEKAVDSLVKKLKKRKGAVEELERALSCPGTPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEICQFPFSAKQKEVCINPYHYKRVESPVLPPVLVPRHSEFAPGHSLLPFQRTAEPSMPHNVSYSGSGFPPSASSELPDTPPPAYSPPSEDSEPPGEVAPVSYQEPLYWASVAYYELNCRVGEVFHCNSHSVVVDGFTDPSNNSDRFCLGQLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDAAIFVQSRNCNHHHGFHPSTVCKIPPGCSLKIFNNREFAQLLSQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNAISSVS
SIO_010081: LOC101742798
subclass of: SO_0000673
so part of: LOC101742798
location: complement(join(1270839..1271837,1272841..1273002,1276256..1276363))
location: region:1270839-1276363:-1
so has part: feature:1276256-1276363:-1:exon
so has part: feature:1272841-1273002:-1:exon
so has part: feature:1270839-1271837:-1:exon

XP_004929407.1
type: Protein
SIO_000068: ncbiprotein

position:1270839:-1
position: 1270839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276363:-1
position: 1276363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276256-1276363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272841-1273002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1270839-1271837:-1:exon

LOC119629229
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC119629229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1277554..1279574)
location: region:1277554-1279574:-1
so has part: feature:1277554-1279574:-1:exon
subclass of: SO_0000010

119629229
type: Gene
SIO_000068: ncbigene

position:1277554:-1
position: 1277554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279574:-1
position: 1279574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277554-1279574:-1:exon

LOC119629229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC119629229
product: uncharacterized LOC119629229
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_038014389.1
SIO_010081: LOC119629229
subclass of: SO_0000673
so part of: LOC119629229
location: complement(join(1277554..1277813,1278861..1279574))
location: region:1277554-1279574:-1
so has part: feature:1278861-1279574:-1:exon
so has part: feature:1277554-1277813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278861-1279574:-1:exon

position:1278861:-1
position: 1278861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277554-1277813:-1:exon

position:1277813:-1
position: 1277813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119629229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC119629229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119629229
translation: MGSFPSIVKPIQSRESNVFNVKAISSIEPLKSTTEPVHSITQSTVVSKQSSNEPLQVTIELLQSSIEPTQSTVQTQQSSAQPGQFATKPVNRIETTTENPESKKSNEHRPFIQVTKSTKSPIGSTLKGYYREINPTQGFGDDVGENEDKRKGRYDLSKFNQAPAMHMAVENEITLKTLIVEDGSKYGRCYCSCDLNSKPVFISLDGSALKPRR
SIO_010081: LOC119629229
subclass of: SO_0000673
so part of: LOC119629229
location: complement(join(1277656..1277813,1278861..1279344))
location: region:1277656-1279344:-1
so has part: feature:1278861-1279344:-1:exon
so has part: feature:1277656-1277813:-1:exon

XP_037870317.1
type: Protein
SIO_000068: ncbiprotein

position:1277656:-1
position: 1277656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279344:-1
position: 1279344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278861-1279344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277656-1277813:-1:exon

LOC101737213
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101737213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1279409..1295951)
location: region:1279409-1295951:-1
so has part: feature:1279409-1295951:-1:exon
subclass of: SO_0000010

101737213
type: Gene
SIO_000068: ncbigene

position:1279409:-1
position: 1279409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295951:-1
position: 1295951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279409-1295951:-1:exon

LOC101737213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737213
product: uncharacterized LOC101737213
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038014408.1
SIO_010081: LOC101737213
subclass of: SO_0000673
so part of: LOC101737213
location: complement(join(1279409..1279457,1279547..1283546,1283669..1285961,1286019..1286501,1288057..1288238,1288284..1290128,1290264..1292285,1293825..1293861,1295768..1295951))
location: region:1279409-1295951:-1
so has part: feature:1295768-1295951:-1:exon
so has part: feature:1293825-1293861:-1:exon
so has part: feature:1290264-1292285:-1:exon
so has part: feature:1288284-1290128:-1:exon
so has part: feature:1288057-1288238:-1:exon
so has part: feature:1286019-1286501:-1:exon
so has part: feature:1283669-1285961:-1:exon
so has part: feature:1279547-1283546:-1:exon
so has part: feature:1279409-1279457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295768-1295951:-1:exon

position:1295768:-1
position: 1295768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1293825-1293861:-1:exon

position:1293825:-1
position: 1293825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293861:-1
position: 1293861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1290264-1292285:-1:exon

position:1290264:-1
position: 1290264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292285:-1
position: 1292285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288284-1290128:-1:exon

position:1288284:-1
position: 1288284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290128:-1
position: 1290128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1288057-1288238:-1:exon

position:1288057:-1
position: 1288057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288238:-1
position: 1288238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1286019-1286501:-1:exon

position:1286019:-1
position: 1286019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286501:-1
position: 1286501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1283669-1285961:-1:exon

position:1283669:-1
position: 1283669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285961:-1
position: 1285961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1279547-1283546:-1:exon

position:1279547:-1
position: 1279547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283546:-1
position: 1283546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1279409-1279457:-1:exon

position:1279457:-1
position: 1279457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101737213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101737213
translation: MKVLCAIVLYIALMQPALCDPPFAKKSNEHHTLDHLLNKGPENGNRYRAPSSFFENSAINKHFQNYFVNQQGRVQPVQPTRSARHLNAKPFRAAENKHNLHANARIPVRHPSIQPKDTQSETNHAKNSNLPTRVSLNLDDVTTESHINENTVPKQPTEGNGQIDSVTNTIDPIIKKPNEVNGTDKKPEIQWTTNTHEQTTSAVGKGETSSNNQLKLNKDTVLKGHYIVRPATTNALDKTQNVEPLTTDSAYQIPLLPPSTQPADSLLSKESNQEVLEKIIEEVIKDNKYENSDDTNPVKFIYKEELVPNAAIENQENVTTTTDLKGFLKNIKEIKHSEEKIENFKENKTQEWKSKKNMTIKKAESITQHDVSKKTNEYTIEKRNETREESDFESNKQLSKYTEESQFELNTRISLTENSDEFAALNEYLEEVKKIENQNKAYEKVEQKSLQAEKFDDLEFWRQEAEKEEKKREKEIREMQSKLNGGRHTEMTEKELVSKAEELVENDEDEFWNQEAIYLDNNYENSKTLNKTNSSISSTTNPKQPITGANIAKTTATEQSTTEAKVLSTTELKQSTTATSVPSTVASEQSTSEISVPSTTGTEQPTTETSVPSTTATEQSRTDIKLPSTTSTVQSTTETNVPSTSVTEKSTTETSVSSTTKLKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETSVPSTIELKQSTTETNVPSTSATEKSTTETSVPSTIELKQSTTETNVPSTSAIEKSTTDTSVPSTTELKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETNVPSTTATEQSTTETSVPSTIELKQSTTETNVPSTSVTEKSTTETSVSSTTKLKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETNVPSTTATEQSTTETSVPSTIELKQSTTETNVPSTSAIEKSTTETSVPSTTELKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETNVPSTSVTEKSTTETSVSSTTELKQSTTETNVPSTTATEQSTTETSVPSTIELKQSTTETSVPSTIELKQSTTETNVPSTSATEQSTTETSVPSTIELKQSTTETNVPSTSVTEKSTTETSVSSTTELKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETNVPSTTATEQSTTETSVPSTIELKQSTTETSVPSTIELKQSTTETNVPSTSATEQSTTETSVPSTIELKQSTTETNVPSTSVTEKSTTETSVSSTTELKQSTTETNASTPTATEQSTTETSVPSTTKLKQSTTETNASTPTATEQSTTETSVPSTIELKQSTTETSVPSTIELKQSTTETNVPSTSAIEKSTTDTSVPSTTELKQSTTETNASTPTATEQSTTETSEQQCNLLPQQRIPLQTQKHSLLLSPNQILQEQQCNLLPLQRVALQTLKFVLPLSTNQTLQEQQCNLLPLQRVPLQTLKLSLPLSPNQTLQEQQCDLLPLQRVPSQTLKFSLPLSPNQTLQEQQCNLVPQQRVPLQTLKLSLPLSPNQTLQEQQCNLLPLQREQQCNLPPQQRVPLQTLKFSLPLSPNQTLQEQQCNLLPQQRVPLQTQKHSLLLSPNQTLQTQQCNLLPLQRVPLQTLKFSLPLSPNQTLQEQQCNLLPLQRVPLQTLKFSLPLSPNQTLQEQRCNLLPLQRVPLQTLNLSLPLSPNQVLQEQQSNLLPLQTLKISLLLSPNQTLQEQQCNLLPLQRVPLQTLKLSLPLSPNQTLQEQRCNLLPLQRVPLQTLNLSLPLSPNQVLQEQQSNLLPLQTLKISLLLSPNQTLQEQQCNLLPLQRVPLQTLKLSLPLSPNQTLQEQQCNLLPLQRVPLQTLKFSLPLSKNQTVQEQQCNLVPQQRVPLQTLKLSLPLSPNQTLQEQQCNLLPLQRVPSQTLKFSLPLSPNQTLQEQQCNLPPQQRVPLQTLKFSLPLSPNQTLQEQQCNLLPQQRVPLQTQKHSLLLSPNQTLQTQQCNLLPLQRVPLQTLKFSLPLS…
SIO_010081: LOC101737213
subclass of: SO_0000673
so part of: LOC101737213
location: complement(join(1279409..1279457,1279547..1283546,1283669..1285961,1286019..1286501,1288057..1288238,1288284..1290128,1290264..1292285,1293825..1293861,1295768..1295806))
location: region:1279409-1295806:-1
so has part: feature:1295768-1295806:-1:exon
so has part: feature:1293825-1293861:-1:exon
so has part: feature:1290264-1292285:-1:exon
so has part: feature:1288284-1290128:-1:exon
so has part: feature:1288057-1288238:-1:exon
so has part: feature:1286019-1286501:-1:exon
so has part: feature:1283669-1285961:-1:exon
so has part: feature:1279547-1283546:-1:exon
so has part: feature:1279409-1279457:-1:exon

XP_037870336.1
type: Protein
SIO_000068: ncbiprotein

position:1295806:-1
position: 1295806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295768-1295806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293825-1293861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1290264-1292285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288284-1290128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288057-1288238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286019-1286501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1283669-1285961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1279547-1283546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1279409-1279457:-1:exon

LOC101742944
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101742944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1311094..1335504)
location: region:1311094-1335504:-1
so has part: feature:1311094-1335504:-1:exon
subclass of: SO_0000010

101742944
type: Gene
SIO_000068: ncbigene

position:1311094:-1
position: 1311094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335504:-1
position: 1335504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311094-1335504:-1:exon

LOC101742944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101742944
product: uncharacterized LOC101742944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_004929351.4
SIO_010081: LOC101742944
subclass of: SO_0000673
so part of: LOC101742944
location: complement(join(1311094..1312035,1314023..1314258,1315148..1315262,1316131..1316269,1316778..1316976,1335043..1335504))
location: region:1311094-1335504:-1
so has part: feature:1335043-1335504:-1:exon
so has part: feature:1316778-1316976:-1:exon
so has part: feature:1316131-1316269:-1:exon
so has part: feature:1315148-1315262:-1:exon
so has part: feature:1314023-1314258:-1:exon
so has part: feature:1311094-1312035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1335043-1335504:-1:exon

position:1335043:-1
position: 1335043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1316778-1316976:-1:exon

position:1316778:-1
position: 1316778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316976:-1
position: 1316976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1316131-1316269:-1:exon

position:1316131:-1
position: 1316131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316269:-1
position: 1316269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315148-1315262:-1:exon

position:1315148:-1
position: 1315148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315262:-1
position: 1315262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1314023-1314258:-1:exon

position:1314023:-1
position: 1314023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314258:-1
position: 1314258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1311094-1312035:-1:exon

position:1312035:-1
position: 1312035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101742944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101742944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101742944
translation: MFPATSLFCQFRSRRARNMLCLSLFLVLLTTPIWTYVTETPSFIDRLGKLYEKLEKITIAPTPDNFGSNSKDKLYAKLERFNALSPDKFELSDEEEELISTMEKWGLSADQMDIIVKELQRTREDDEEKIERNEEYNDEDELLKDLSEGDYLNDKDWETEDEVTFSTSKPLLGTMPSAFTKTTYKKTIISAAEPIALTNERPRILDETSLTKLGTQLRQEAFANAAKFIRESRCHTPQARWLTVRQMAPAADTNYMPSCVRLHRCTPDSGCCTNDADICAPIEGKYVALPFYLHKADGNTNVARMVFYNHTKCACVSRETLQTTIRTRIESKPEPEPRRDLAIESQNDWRMPTEAPKLDSEEPTAPPQLRRCTCPTLFLSTPENGSCSCICDWPEAARRRDCLSLARGKEHFGLRDRVCVAQGHCNQPSCEYGSYDKTNGICPLRRFRRLRFHRVRPQPEKTMVV
SIO_010081: LOC101742944
subclass of: SO_0000673
so part of: LOC101742944
location: complement(join(1311750..1312035,1314023..1314258,1315148..1315262,1316131..1316269,1316778..1316976,1335043..1335465))
location: region:1311750-1335465:-1
so has part: feature:1335043-1335465:-1:exon
so has part: feature:1316778-1316976:-1:exon
so has part: feature:1316131-1316269:-1:exon
so has part: feature:1315148-1315262:-1:exon
so has part: feature:1314023-1314258:-1:exon
so has part: feature:1311750-1312035:-1:exon

XP_004929408.2
type: Protein
SIO_000068: ncbiprotein

position:1311750:-1
position: 1311750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335465:-1
position: 1335465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335043-1335465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316778-1316976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316131-1316269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315148-1315262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1314023-1314258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1311750-1312035:-1:exon

LOC101743083
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1366873..1372646)
location: region:1366873-1372646:-1
so has part: feature:1366873-1372646:-1:exon
subclass of: SO_0000010

101743083
type: Gene
SIO_000068: ncbigene

position:1366873:-1
position: 1366873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372646:-1
position: 1372646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366873-1372646:-1:exon

LOC101743083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743083
product: protein FAM151A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_004929352.4
SIO_010081: LOC101743083
subclass of: SO_0000673
so part of: LOC101743083
location: complement(join(1366873..1367219,1368430..1368672,1368963..1369207,1369705..1369806,1372492..1372646))
location: region:1366873-1372646:-1
so has part: feature:1372492-1372646:-1:exon
so has part: feature:1369705-1369806:-1:exon
so has part: feature:1368963-1369207:-1:exon
so has part: feature:1368430-1368672:-1:exon
so has part: feature:1366873-1367219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1372492-1372646:-1:exon

position:1372492:-1
position: 1372492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1369705-1369806:-1:exon

position:1369705:-1
position: 1369705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369806:-1
position: 1369806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368963-1369207:-1:exon

position:1368963:-1
position: 1368963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369207:-1
position: 1369207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1368430-1368672:-1:exon

position:1368430:-1
position: 1368430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368672:-1
position: 1368672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1366873-1367219:-1:exon

position:1367219:-1
position: 1367219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743083
product: protein FAM151A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_004929353.4
SIO_010081: LOC101743083
subclass of: SO_0000673
so part of: LOC101743083
location: complement(join(1366873..1367219,1368430..1368672,1368963..1369207,1369705..1369806,1370104..1370258))
location: region:1366873-1370258:-1
so has part: feature:1370104-1370258:-1:exon
so has part: feature:1369705-1369806:-1:exon
so has part: feature:1368963-1369207:-1:exon
so has part: feature:1368430-1368672:-1:exon
so has part: feature:1366873-1367219:-1:exon

position:1370258:-1
position: 1370258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370104-1370258:-1:exon

position:1370104:-1
position: 1370104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1369705-1369806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368963-1369207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368430-1368672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366873-1367219:-1:exon

LOC101743083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM151A isoform X1
translation: MFLVIILFVTATFVTCEEETMKNLTTVTWAHAVNNKTYLEAALASEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILPGPVKATTTPVDPIKFIELGANHPRAVLCMGWTTRYGGNITEGEYTPEQIGSMLRLVNEQKINQTITFPVRAGLACNSQPVLLDLLRETASLNSSMTVWSSEGDSVEVGRLKALILTVGLERTYLDVPHDLAAKLNLPSTDKVKH
SIO_010081: LOC101743083
subclass of: SO_0000673
so part of: LOC101743083
location: complement(join(1366989..1367219,1368430..1368672,1368963..1369207,1369705..1369806,1372492..1372522))
location: region:1366989-1372522:-1
so has part: feature:1372492-1372522:-1:exon
so has part: feature:1369705-1369806:-1:exon
so has part: feature:1368963-1369207:-1:exon
so has part: feature:1368430-1368672:-1:exon
so has part: feature:1366989-1367219:-1:exon

XP_004929409.1
type: Protein
SIO_000068: ncbiprotein

position:1366989:-1
position: 1366989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372522:-1
position: 1372522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372492-1372522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369705-1369806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368963-1369207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368430-1368672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366989-1367219:-1:exon

LOC101743083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM151A isoform X2
translation: MKNLTTVTWAHAVNNKTYLEAALASEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILPGPVKATTTPVDPIKFIELGANHPRAVLCMGWTTRYGGNITEGEYTPEQIGSMLRLVNEQKINQTITFPVRAGLACNSQPVLLDLLRETASLNSSMTVWSSEGDSVEVGRLKALILTVGLERTYLDVPHDLAAKLNLPSTDKVKH
SIO_010081: LOC101743083
subclass of: SO_0000673
so part of: LOC101743083
location: complement(join(1366989..1367219,1368430..1368672,1368963..1369207,1369705..1369777))
location: region:1366989-1369777:-1
so has part: feature:1369705-1369777:-1:exon
so has part: feature:1368963-1369207:-1:exon
so has part: feature:1368430-1368672:-1:exon
so has part: feature:1366989-1367219:-1:exon

XP_004929410.1
type: Protein
SIO_000068: ncbiprotein

position:1369777:-1
position: 1369777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369705-1369777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368963-1369207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368430-1368672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366989-1367219:-1:exon

SCRB4
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmSCRB4
alternative label: Cameo2
gene: SCRB4
gene synonym: BmSCRB4; Cameo2
note: scavenger receptor class B member 4; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1382103..1454298)
location: region:1382103-1454298:-1
so has part: feature:1382103-1454298:-1:exon
subclass of: SO_0000010

100328605
type: Gene
SIO_000068: ncbigene

position:1382103:-1
position: 1382103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454298:-1
position: 1454298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382103-1454298:-1:exon

SCRB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmSCRB4
alternative label: Cameo2
gene: SCRB4
gene synonym: BmSCRB4; Cameo2
product: scavenger receptor class B member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038014248.1
SIO_010081: SCRB4
subclass of: SO_0000673
so part of: SCRB4
location: complement(join(1382103..1383570,1384482..1384555,1385340..1385542,1387215..1387386,1387926..1388051,1388712..1388930,1395251..1395408,1397348..1397486,1398031..1398156))
location: region:1382103-1398156:-1
so has part: feature:1398031-1398156:-1:exon
so has part: feature:1397348-1397486:-1:exon
so has part: feature:1395251-1395408:-1:exon
so has part: feature:1388712-1388930:-1:exon
so has part: feature:1387926-1388051:-1:exon
so has part: feature:1387215-1387386:-1:exon
so has part: feature:1385340-1385542:-1:exon
so has part: feature:1384482-1384555:-1:exon
so has part: feature:1382103-1383570:-1:exon

position:1398156:-1
position: 1398156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398031-1398156:-1:exon

position:1398031:-1
position: 1398031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1397348-1397486:-1:exon

position:1397348:-1
position: 1397348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397486:-1
position: 1397486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1395251-1395408:-1:exon

position:1395251:-1
position: 1395251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395408:-1
position: 1395408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1388712-1388930:-1:exon

position:1388712:-1
position: 1388712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388930:-1
position: 1388930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1387926-1388051:-1:exon

position:1387926:-1
position: 1387926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388051:-1
position: 1388051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1387215-1387386:-1:exon

position:1387215:-1
position: 1387215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387386:-1
position: 1387386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1385340-1385542:-1:exon

position:1385340:-1
position: 1385340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385542:-1
position: 1385542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1384482-1384555:-1:exon

position:1384482:-1
position: 1384482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384555:-1
position: 1384555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1382103-1383570:-1:exon

position:1383570:-1
position: 1383570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCRB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmSCRB4
alternative label: Cameo2
gene: SCRB4
gene synonym: BmSCRB4; Cameo2
product: scavenger receptor class B member 4
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001171180.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171180.1
SIO_010081: SCRB4
subclass of: SO_0000673
so part of: SCRB4
location: complement(join(1382198..1383570,1384482..1384555,1385340..1385542,1387215..1387386,1387926..1388051,1388712..1388930,1395251..1395408,1397348..1397486,1409549..1409679,1454087..1454298))
location: region:1382198-1454298:-1
so has part: feature:1454087-1454298:-1:exon
so has part: feature:1409549-1409679:-1:exon
so has part: feature:1397348-1397486:-1:exon
so has part: feature:1395251-1395408:-1:exon
so has part: feature:1388712-1388930:-1:exon
so has part: feature:1387926-1388051:-1:exon
so has part: feature:1387215-1387386:-1:exon
so has part: feature:1385340-1385542:-1:exon
so has part: feature:1384482-1384555:-1:exon
so has part: feature:1382198-1383570:-1:exon

position:1382198:-1
position: 1382198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454087-1454298:-1:exon

position:1454087:-1
position: 1454087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409549-1409679:-1:exon

position:1409549:-1
position: 1409549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409679:-1
position: 1409679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1397348-1397486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1395251-1395408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1388712-1388930:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1387926-1388051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1387215-1387386:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1385340-1385542:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1384482-1384555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1382198-1383570:-1:exon

SCRB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmSCRB4
alternative label: Cameo2
gene: SCRB4
gene synonym: BmSCRB4; Cameo2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: scavenger receptor class B member 4
translation: MRGGLLRWRSLWICGGALLALSAFVAALTWGAIFDSAFGSQLALIPDSRSFMRWLEPDVPIFFDIYMFNWTNPERFPEEKPNFEEIGPYRYQEHRRHVNISWHPENGTIGYRTLRSWVWDESSVGSQDDIITTIDVITASAIYQARFSGFIEQKLVSLTLTSSQHTKVSVTARASEFLFEGYEDPLLNLAKLMPASVRGGAPALDRFGWFFSRNNTDTDGYMEVTSGTRDGLPGQILRWNYQDHIPFYDGECSKLSGSAGEYIPRNLTEDSKLTMYVPDLCRTVNMEFVESGVQNGLKYNKYEVNERSFDNSSTSPENTCFCKGECAWGGVMNVSACRFGSPAFITLPHFLHGDPALLDQVTGMNPDPDKHSFYFAVEPKLGVPIDVAGRFQFNVYVEPSDHITLYENMPRMLFPVFWVEQKAKIDPKIISELRTVRGILDWGPTFCACFAVVIALLVTAITCCTKRTEYTRPHDLLKPYEKPKDEAEMKLNPI
SIO_010081: SCRB4
subclass of: SO_0000673
so part of: SCRB4
location: complement(join(1383297..1383570,1384482..1384555,1385340..1385542,1387215..1387386,1387926..1388051,1388712..1388930,1395251..1395408,1397348..1397486,1409549..1409668))
location: region:1383297-1409668:-1
so has part: feature:1409549-1409668:-1:exon
so has part: feature:1397348-1397486:-1:exon
so has part: feature:1395251-1395408:-1:exon
so has part: feature:1388712-1388930:-1:exon
so has part: feature:1387926-1388051:-1:exon
so has part: feature:1387215-1387386:-1:exon
so has part: feature:1385340-1385542:-1:exon
so has part: feature:1384482-1384555:-1:exon
so has part: feature:1383297-1383570:-1:exon

NP_001164651.1
type: Protein
SIO_000068: ncbiprotein

position:1383297:-1
position: 1383297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409668:-1
position: 1409668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409549-1409668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397348-1397486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1395251-1395408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1388712-1388930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1387926-1388051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1387215-1387386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1385340-1385542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1384482-1384555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1383297-1383570:-1:exon

SCRB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmSCRB4
alternative label: Cameo2
gene: SCRB4
gene synonym: BmSCRB4; Cameo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class B member 4 isoform X1
translation: MRWLEPDVPIFFDIYMFNWTNPERFPEEKPNFEEIGPYRYQEHRRHVNISWHPENGTIGYRTLRSWVWDESSVGSQDDIITTIDVITASAIYQARFSGFIEQKLVSLTLTSSQHTKVSVTARASEFLFEGYEDPLLNLAKLMPASVRGGAPALDRFGWFFSRNNTDTDGYMEVTSGTRDGLPGQILRWNYQDHIPFYDGECSKLSGSAGEYIPRNLTEDSKLTMYVPDLCRTVNMEFVESGVQNGLKYNKYEVNERSFDNSSTSPENTCFCKGECAWGGVMNVSACRFGSPAFITLPHFLHGDPALLDQVTGMNPDPDKHSFYFAVEPKLGVPIDVAGRFQFNVYVEPSDHITLYENMPRMLFPVFWVEQKAKIDPKIISELRTVRGILDWGPTFCACFAVVIALLVTAITCCTKRTEYTRPHDLLKPYEKPKDEAEMKLNPI
SIO_010081: SCRB4
subclass of: SO_0000673
so part of: SCRB4
location: complement(join(1383297..1383570,1384482..1384555,1385340..1385542,1387215..1387386,1387926..1388051,1388712..1388930,1395251..1395408,1397348..1397453))
location: region:1383297-1397453:-1
so has part: feature:1397348-1397453:-1:exon
so has part: feature:1395251-1395408:-1:exon
so has part: feature:1388712-1388930:-1:exon
so has part: feature:1387926-1388051:-1:exon
so has part: feature:1387215-1387386:-1:exon
so has part: feature:1385340-1385542:-1:exon
so has part: feature:1384482-1384555:-1:exon
so has part: feature:1383297-1383570:-1:exon

XP_037870176.1
type: Protein
SIO_000068: ncbiprotein

position:1397453:-1
position: 1397453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397348-1397453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1395251-1395408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388712-1388930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1387926-1388051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1387215-1387386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385340-1385542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1384482-1384555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1383297-1383570:-1:exon

SCRB3
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
alternative label: BmSCRB3
alternative label: Cameo1
gene: SCRB3
gene synonym: BmSCRB3; Cameo1
note: scavenger receptor class B member 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1467615..1507312)
location: region:1467615-1507312:-1
so has part: feature:1467615-1507312:-1:exon
subclass of: SO_0000010

100328604
type: Gene
SIO_000068: ncbigene

position:1467615:-1
position: 1467615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507312:-1
position: 1507312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467615-1507312:-1:exon

SCRB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
alternative label: BmSCRB3
alternative label: Cameo1
gene: SCRB3
gene synonym: BmSCRB3; Cameo1
product: scavenger receptor class B member 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171179.1
SIO_010081: SCRB3
subclass of: SO_0000673
so part of: SCRB3
location: complement(join(1467615..1467799,1468496..1468643,1469007..1469111,1471578..1471738,1472532..1472640,1476144..1476352,1480618..1480827,1482813..1482938,1491055..1491234,1491702..1491828,1507112..1507312))
location: region:1467615-1507312:-1
so has part: feature:1507112-1507312:-1:exon
so has part: feature:1491702-1491828:-1:exon
so has part: feature:1491055-1491234:-1:exon
so has part: feature:1482813-1482938:-1:exon
so has part: feature:1480618-1480827:-1:exon
so has part: feature:1476144-1476352:-1:exon
so has part: feature:1472532-1472640:-1:exon
so has part: feature:1471578-1471738:-1:exon
so has part: feature:1469007-1469111:-1:exon
so has part: feature:1468496-1468643:-1:exon
so has part: feature:1467615-1467799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1507112-1507312:-1:exon

position:1507112:-1
position: 1507112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1491702-1491828:-1:exon

position:1491702:-1
position: 1491702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491828:-1
position: 1491828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1491055-1491234:-1:exon

position:1491055:-1
position: 1491055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491234:-1
position: 1491234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1482813-1482938:-1:exon

position:1482813:-1
position: 1482813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482938:-1
position: 1482938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1480618-1480827:-1:exon

position:1480618:-1
position: 1480618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480827:-1
position: 1480827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1476144-1476352:-1:exon

position:1476144:-1
position: 1476144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476352:-1
position: 1476352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1472532-1472640:-1:exon

position:1472532:-1
position: 1472532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472640:-1
position: 1472640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1471578-1471738:-1:exon

position:1471578:-1
position: 1471578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471738:-1
position: 1471738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1469007-1469111:-1:exon

position:1469007:-1
position: 1469007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469111:-1
position: 1469111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1468496-1468643:-1:exon

position:1468496:-1
position: 1468496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468643:-1
position: 1468643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1467615-1467799:-1:exon

position:1467799:-1
position: 1467799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCRB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
alternative label: BmSCRB3
alternative label: Cameo1
gene: SCRB3
gene synonym: BmSCRB3; Cameo1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: scavenger receptor class B member 3
translation: MKMVSSGVKSGLFMGFGSALVLIGAIVVVYWPSLFMAQLQRMMILSPTSTSFGIWQETPIPMYLECYMFNITNADKILAKEDVILKVEQLGPYVFRESHSKVNLTWNDNSTITFYNQRFWHFDQNLSKGSLSDEIISINPIIATVAYIVRHQPRVVKVSVDVFLRMFHDDLFLKANVSSWLFEGIEDPVLEMAQKFPDLPLNIPYDKFGWFYERNGSREFDGSFIMNTGAADFSRLGNIELWKYSPRTVFRDHCGDVKGSTGELWAPELGQPELFVFASDICTYLTLHKKEDVLIENIEGVRYAANDSLFDNGHKYPAMACYCDEVRDRDCVPPGALNVSLCRLGAPAFVSQPHFLDADPYYPSKIQGLDPQEEHRFSLALEMFTGMPLAVSAQLQINLLIRDVWGISINNVLPDPDTMVPMFWFRQELQVTPEYAHMARVALALRYYTPYALYTLTVIGVVLILVGVVVLIRRLLNSSDTTPLIEESASQENQQ
SIO_010081: SCRB3
subclass of: SO_0000673
so part of: SCRB3
location: complement(join(1467683..1467799,1468496..1468643,1469007..1469111,1471578..1471738,1472532..1472640,1476144..1476352,1480618..1480827,1482813..1482938,1491055..1491234,1491702..1491824))
location: region:1467683-1491824:-1
so has part: feature:1491702-1491824:-1:exon
so has part: feature:1491055-1491234:-1:exon
so has part: feature:1482813-1482938:-1:exon
so has part: feature:1480618-1480827:-1:exon
so has part: feature:1476144-1476352:-1:exon
so has part: feature:1472532-1472640:-1:exon
so has part: feature:1471578-1471738:-1:exon
so has part: feature:1469007-1469111:-1:exon
so has part: feature:1468496-1468643:-1:exon
so has part: feature:1467683-1467799:-1:exon

NP_001164650.1
type: Protein
SIO_000068: ncbiprotein

position:1467683:-1
position: 1467683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491824:-1
position: 1491824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491702-1491824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1491055-1491234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482813-1482938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480618-1480827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1476144-1476352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1472532-1472640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1471578-1471738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469007-1469111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468496-1468643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467683-1467799:-1:exon

Hop
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: Hop
note: Hsc70/Hsp90-organizing protein HOP; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1510204..1515562)
location: region:1510204-1515562:-1
so has part: feature:1510204-1515562:-1:exon
subclass of: SO_0000010

692503
type: Gene
SIO_000068: ncbigene

position:1510204:-1
position: 1510204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515562:-1
position: 1515562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510204-1515562:-1:exon

Hop
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: Hop
product: Hsc70/Hsp90-organizing protein HOP
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001043492.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 2 frameshifts compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001043492.1
SIO_010081: Hop
subclass of: SO_0000673
so part of: Hop
location: complement(join(1510204..1510383,1510898..1511023,1512017..1512213,1512743..1512943,1513439..1513901,1515028..1515477,1515554..1515562))
location: region:1510204-1515562:-1
so has part: feature:1515554-1515562:-1:exon
so has part: feature:1515028-1515477:-1:exon
so has part: feature:1513439-1513901:-1:exon
so has part: feature:1512743-1512943:-1:exon
so has part: feature:1512017-1512213:-1:exon
so has part: feature:1510898-1511023:-1:exon
so has part: feature:1510204-1510383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1515554-1515562:-1:exon

position:1515554:-1
position: 1515554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515028-1515477:-1:exon

position:1515028:-1
position: 1515028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515477:-1
position: 1515477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1513439-1513901:-1:exon

position:1513439:-1
position: 1513439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513901:-1
position: 1513901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1512743-1512943:-1:exon

position:1512743:-1
position: 1512743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512943:-1
position: 1512943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1512017-1512213:-1:exon

position:1512017:-1
position: 1512017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512213:-1
position: 1512213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1510898-1511023:-1:exon

position:1510898:-1
position: 1510898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511023:-1
position: 1511023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1510204-1510383:-1:exon

position:1510383:-1
position: 1510383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hop
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: Hop
inference: similar to AA sequence (same species):RefSeq:NP_001036957.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 6 substitutions, 2 frameshifts compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: Hsc70/Hsp90-organizing protein HOP
translation: MDKVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSAAHAKAENYEAALEDAEKTVSLHPNWSKGYSRKGSVLAYLSRYEEAIEAYRTGLRLEPTNQQLAQGLRDVERAMKESNLEAERLIRLYKNPRTREWMRDPEYVTKIAKPLVKNTYDIRDLNMEDERVAATITALWQADLDAETAMDVDPPAPEKTPSTAPKQKEEPPKDKYEGLPENRKQALIQKDLGNDCYKKKEFDNAITHYEKAIEFDPTDITFYTNMAAVFFEQKEYEKCIKECEKAIEIGRENRADFKLIAKAFTRIGNAYKKMEQWKLAKTYFEKSMSEHRTPAIKTLLGEVERRIVEEERKAYIDPVKAEQEKELGNEYFKKGDYSTAVKHYTEAIKRNPDDSKLYSNRAACYTKLAAFDLGLKDCEQCCKLDPKFIKGWIRKGKILQGMQQPSKALTAYQKALELDPSNAEALEGYRSCSTQLTSNPEEVRKRAMSDPEVQQILRDPAMRCILEQMQQDPHALQDHLKNPEIAAKIAETLESGLIALH
SIO_010081: Hop
subclass of: SO_0000673
so part of: Hop
location: complement(join(1510204..1510383,1510898..1511023,1512017..1512213,1512743..1512943,1513439..1513901,1515028..1515477,1515554..1515562))
location: region:1510204-1515562:-1
so has part: feature:1515554-1515562:-1:exon
so has part: feature:1515028-1515477:-1:exon
so has part: feature:1513439-1513901:-1:exon
so has part: feature:1512743-1512943:-1:exon
so has part: feature:1512017-1512213:-1:exon
so has part: feature:1510898-1511023:-1:exon
so has part: feature:1510204-1510383:-1:exon

NP_001036957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1515554-1515562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515028-1515477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513439-1513901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1512743-1512943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1512017-1512213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1510898-1511023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1510204-1510383:-1:exon

LOC101737362
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1517091..1599943)
location: region:1517091-1599943:-1
so has part: feature:1517091-1599943:-1:exon
subclass of: SO_0000010

101737362
type: Gene
SIO_000068: ncbigene

position:1517091:-1
position: 1517091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599943:-1
position: 1599943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1517091-1599943:-1:exon

LOC101737362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038014470.1
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517091..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599933))
location: region:1517091-1599933:-1
so has part: feature:1599780-1599933:-1:exon
so has part: feature:1597834-1598262:-1:exon
so has part: feature:1596969-1597250:-1:exon
so has part: feature:1595917-1596511:-1:exon
so has part: feature:1593866-1594070:-1:exon
so has part: feature:1593389-1593526:-1:exon
so has part: feature:1592639-1592785:-1:exon
so has part: feature:1591695-1591817:-1:exon
so has part: feature:1590565-1590659:-1:exon
so has part: feature:1590416-1590491:-1:exon
so has part: feature:1589655-1589780:-1:exon
so has part: feature:1583279-1583377:-1:exon
so has part: feature:1582547-1582786:-1:exon
so has part: feature:1581618-1581732:-1:exon
so has part: feature:1580932-1581180:-1:exon
so has part: feature:1579870-1580066:-1:exon
so has part: feature:1579038-1579199:-1:exon
so has part: feature:1578585-1578702:-1:exon
so has part: feature:1578331-1578485:-1:exon
so has part: feature:1577416-1577591:-1:exon
so has part: feature:1575773-1575940:-1:exon
so has part: feature:1575131-1575298:-1:exon
so has part: feature:1573894-1574119:-1:exon
so has part: feature:1573187-1573306:-1:exon
so has part: feature:1572250-1572383:-1:exon
so has part: feature:1570972-1571242:-1:exon
so has part: feature:1567750-1567893:-1:exon
so has part: feature:1566928-1567026:-1:exon
so has part: feature:1565912-1566131:-1:exon
so has part: feature:1565260-1565422:-1:exon
so has part: feature:1564394-1564572:-1:exon
so has part: feature:1563849-1564041:-1:exon
so has part: feature:1563266-1563407:-1:exon
so has part: feature:1561718-1561855:-1:exon
so has part: feature:1560489-1560707:-1:exon
so has part: feature:1559602-1559845:-1:exon
so has part: feature:1558524-1558660:-1:exon
so has part: feature:1557895-1558050:-1:exon
so has part: feature:1556320-1556522:-1:exon
so has part: feature:1555427-1555612:-1:exon
so has part: feature:1554518-1554682:-1:exon
so has part: feature:1553728-1553840:-1:exon
so has part: feature:1553389-1553534:-1:exon
so has part: feature:1552664-1552847:-1:exon
so has part: feature:1552203-1552321:-1:exon
so has part: feature:1551644-1551750:-1:exon
so has part: feature:1548534-1548695:-1:exon
so has part: feature:1547712-1547860:-1:exon
so has part: feature:1547092-1547207:-1:exon
so has part: feature:1546139-1546291:-1:exon
so has part: feature:1545301-1545440:-1:exon
so has part: feature:1544757-1544898:-1:exon
so has part: feature:1543531-1543712:-1:exon
so has part: feature:1542758-1542881:-1:exon
so has part: feature:1541806-1542009:-1:exon
so has part: feature:1540198-1540302:-1:exon
so has part: feature:1539390-1539616:-1:exon
so has part: feature:1537720-1537949:-1:exon
so has part: feature:1536540-1536694:-1:exon
so has part: feature:1535576-1535675:-1:exon
so has part: feature:1534777-1534901:-1:exon
so has part: feature:1533873-1534095:-1:exon
so has part: feature:1533111-1533286:-1:exon
so has part: feature:1532262-1532432:-1:exon
so has part: feature:1530903-1531102:-1:exon
so has part: feature:1529537-1529700:-1:exon
so has part: feature:1528215-1528361:-1:exon

position:1599933:-1
position: 1599933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1599780-1599933:-1:exon

position:1599780:-1
position: 1599780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597834-1598262:-1:exon

position:1597834:-1
position: 1597834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598262:-1
position: 1598262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1596969-1597250:-1:exon

position:1596969:-1
position: 1596969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597250:-1
position: 1597250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595917-1596511:-1:exon

position:1595917:-1
position: 1595917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596511:-1
position: 1596511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1593866-1594070:-1:exon

position:1593866:-1
position: 1593866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594070:-1
position: 1594070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1593389-1593526:-1:exon

position:1593389:-1
position: 1593389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593526:-1
position: 1593526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1592639-1592785:-1:exon

position:1592639:-1
position: 1592639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592785:-1
position: 1592785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1591695-1591817:-1:exon

position:1591695:-1
position: 1591695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591817:-1
position: 1591817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1590565-1590659:-1:exon

position:1590565:-1
position: 1590565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590659:-1
position: 1590659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1590416-1590491:-1:exon

position:1590416:-1
position: 1590416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590491:-1
position: 1590491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1589655-1589780:-1:exon

position:1589655:-1
position: 1589655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589780:-1
position: 1589780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1583279-1583377:-1:exon

position:1583279:-1
position: 1583279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583377:-1
position: 1583377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1582547-1582786:-1:exon

position:1582547:-1
position: 1582547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582786:-1
position: 1582786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1581618-1581732:-1:exon

position:1581618:-1
position: 1581618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581732:-1
position: 1581732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1580932-1581180:-1:exon

position:1580932:-1
position: 1580932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581180:-1
position: 1581180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1579870-1580066:-1:exon

position:1579870:-1
position: 1579870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580066:-1
position: 1580066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1579038-1579199:-1:exon

position:1579038:-1
position: 1579038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579199:-1
position: 1579199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1578585-1578702:-1:exon

position:1578585:-1
position: 1578585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578702:-1
position: 1578702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1578331-1578485:-1:exon

position:1578331:-1
position: 1578331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578485:-1
position: 1578485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1577416-1577591:-1:exon

position:1577416:-1
position: 1577416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577591:-1
position: 1577591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1575773-1575940:-1:exon

position:1575773:-1
position: 1575773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575940:-1
position: 1575940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1575131-1575298:-1:exon

position:1575131:-1
position: 1575131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575298:-1
position: 1575298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1573894-1574119:-1:exon

position:1573894:-1
position: 1573894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574119:-1
position: 1574119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1573187-1573306:-1:exon

position:1573187:-1
position: 1573187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573306:-1
position: 1573306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1572250-1572383:-1:exon

position:1572250:-1
position: 1572250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572383:-1
position: 1572383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1570972-1571242:-1:exon

position:1570972:-1
position: 1570972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571242:-1
position: 1571242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1567750-1567893:-1:exon

position:1567750:-1
position: 1567750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567893:-1
position: 1567893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1566928-1567026:-1:exon

position:1566928:-1
position: 1566928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567026:-1
position: 1567026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1565912-1566131:-1:exon

position:1565912:-1
position: 1565912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566131:-1
position: 1566131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1565260-1565422:-1:exon

position:1565260:-1
position: 1565260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565422:-1
position: 1565422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1564394-1564572:-1:exon

position:1564394:-1
position: 1564394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564572:-1
position: 1564572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1563849-1564041:-1:exon

position:1563849:-1
position: 1563849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564041:-1
position: 1564041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1563266-1563407:-1:exon

position:1563266:-1
position: 1563266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563407:-1
position: 1563407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1561718-1561855:-1:exon

position:1561718:-1
position: 1561718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561855:-1
position: 1561855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1560489-1560707:-1:exon

position:1560489:-1
position: 1560489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560707:-1
position: 1560707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1559602-1559845:-1:exon

position:1559602:-1
position: 1559602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559845:-1
position: 1559845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1558524-1558660:-1:exon

position:1558524:-1
position: 1558524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558660:-1
position: 1558660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1557895-1558050:-1:exon

position:1557895:-1
position: 1557895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558050:-1
position: 1558050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1556320-1556522:-1:exon

position:1556320:-1
position: 1556320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556522:-1
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SIO_000628: feature:1555427-1555612:-1:exon

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SIO_000300: 56
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urn:…
SIO_000300: 59
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LOC101737362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038014468.1
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517091..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1522159..1522407,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599930))
location: region:1517091-1599930:-1
so has part: feature:1599780-1599930:-1:exon
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position:1599930:-1
position: 1599930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:1522159:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522407:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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LOC101737362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038014469.1
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517091..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1522159..1522407,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599929))
location: region:1517091-1599929:-1
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position:1599929:-1
position: 1599929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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LOC101737362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 2, axonemal isoform X2
translation: MEDEFKRPKVAWSDDLSHDSEEERERERLAQLEKELAETPIKPSYDPEELHKLIGYIMRITTLYDLREEDWTEDVKHGIEEWLLEPRSLILCIYFRGDKLKSISDIPLSPVYDLTYFIRAPDFVFKSDTFHDDIIFGTFVDSVESNVIQILENVYAPYFFAVNAWPDSVKSEFCSQIHTFLAKLTDMYYKMLGLTVLYIPREGQQLTFEQASADRELVKRLEGVVVYWTHQIKSCLEDHAFVASQKELLCPSDEYDFWIYRHENLNALLYQLKNPAVRHITKTLVTTHSTFIHQFQTLCQEVIQKINEATSNIEYLQVIKQPCAILECVIDPDEIAKHVPQIINLFRFIWMESPYYNSEARITNLFKALSNQIIILCRNYVNLDELFEGETKKALGEFTKCIECCKKYREIYDTMAEAHCDSKPDSWNLDTGSIFNYIDSFVQRCFDMLEVCNCMIIFGRIDELEHINKPMFSGARGDQFEAKCDQIEHMFQDALLNVRRVSRAILDVQAPAWYDDILQFRTVIKDIEIIIENLVESVFEGVNHVEEAVVALFSLNNYSKRKSLKRIFKKKTAEVWAMFSDEVQEAKKDMVSNRGQFPADLPSFAGRAIVLKTRKNRLVYLKKVMTDASVWMMACSNSEDVIMHVNRLMGAIDVAIRELWISWTHNLDEKCSAGLNRTLMRKSAENLGLLECNIDMNILDLCKEAAHWENLGQDIPLHAYQVYMKSKTIYYVYESVLAVVKGYNKIIDSLSDDERLLFKPMITACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQIHFVTLNSNHLKKSIIAHCLVWQTKLGELLRKITESDIDKVYVYVEKSSEDAMKMPADLNQLASAIATYEHLMSDISRVQHTFPPITDQMQTLAKFEVELSSDMVARHENIPVIWAEYLALLEEAKKALELNKDKFKADLLEQAEVFKEAAKTFCEDFYETLPCSSEVTGKDAISQLKAFRDQLNALRAQEQQIRDGLAVFNLTTPVNLDLQKMEKELEKLEEVWGLVFQWEESWEKYKTQTFWEMETDEMEENVMFLFRNFNRLSRQLKDKGWDVIETTRVKVDAFRRTLPLIGDLKNPCMRERHWERIKTLMAVEFDENSEDFKLEVIMRLNFQAYSDEIAEISNAATMELNIENGLKAIREVWKNTTYEMQQHKGEMYRIKNVEDVMQFLEDHQVQLSSMKSTKYVEPFIKEVDYWEKSLGYVAECIEIALQVQRRYLYLESIFCGEDIRKQLPSEVQIFDALTDDWTEITSNMYAGTNAVEACLYNPAPYVYNKLNSMVDNLDGILRALEKYLETKRQLFPRFYFVSNDDMLEILGNSKKPQLIQTHLKKLFDNVNKIRIDKNALGLPVAKAMMSEDGECIEWKYNLVLDGPAEVWLLGLEHTMRVVLREIQWTSDCTRTLCRCEIMNEKKPMKKLRKKQNQILSTLQMMSRKEISKILRCKVNALCVIEIHSRDMVDKMYKLGCMTVSAFEWFSQLKFYWDREREDCYIRQTNTNSIYTYEYIGNSGRLVITPLTDRCYITLTTALHLFRGGSPQGPAGTGKTETTKDLGRALARWVVVTNCSDGLDYKSMAKCFAGIAQSGCWGCFDEFNRINIEVLSVVAQQILAVLLALSLYQKKFVFEGSEIKLDGNCGIFITMNPGYAGRTELPDNLKSMFRPIAMCVPDSLIIAENTLFSDGFTAYKINAKKVFTLYQLATQQLSKQDHYDFGLRS…
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517123..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1522159..1522407,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599852))
location: region:1517123-1599852:-1
so has part: feature:1599780-1599852:-1:exon
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so has part: feature:1529537-1529700:-1:exon
so has part: feature:1528215-1528361:-1:exon

XP_037870397.1
type: Protein
SIO_000068: ncbiprotein

position:1517123:-1
position: 1517123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599852:-1
position: 1599852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000300: 77
SIO_000628: feature:1518017-1518150:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1517123-1517262:-1:exon

LOC101737362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 2, axonemal isoform X3
translation: MEDEFKRPKVAWSDDLSHDSEEERERERLAQLEKELAETPIKPSYDPEELHKLIGYIMRITTLYDLREEDWTEDVKHGIEEWLLEPRSLILCIYFRGDKLKSISDIPLSPVYDLTYFIRAPDFVFKSDTFHDDIIFGTFVDSVESNVIQILENVYAPYFFAVNAWPDSVKSEFCSQIHTFLAKLTDMYYKMLGLTVLYIPREGQQLTFEQASADRELVKRLEGVVVYWTHQIKSCLEDHAFVASQKELLCPSDEYDFWIYRHENLNALLYQLKNPAVRHITKTLVTTHSTFIHQFQTLCQEVIQKINEATSNIEYLQVIKQPCAILECVIDPDEIAKHVPQIINLFRFIWMESPYYNSEARITNLFKALSNQIIILCRNYVNLDELFEGETKKALGEFTKCIECCKKYREIYDTMAEAHCDSKPDSWNLDTGSIFNYIDSFVQRCFDMLEVCNCMIIFGRIDELEHINKPMFSGARGDQFEAKCDQIEHMFQDALLNVRRVSRAILDVQAPAWYDDILQFRTVIKDIEIIIENLVESVFEGVNHVEEAVVALFSLNNYSKRKSLKRIFKKKTAEVWAMFSDEVQEAKKDMVSNRGQFPADLPSFAGRAIVLKTRKNRLVYLKKVMTDASVWMMACSNSEDVIMHVNRLMGAIDVAIRELWISWTHNLDEKCSAGLNRTLMRKSAENLGLLECNIDMNILDLCKEAAHWENLGQDIPLHAYQVYMKSKTIYYVYESVLAVVKGYNKIIDSLSDDERLLFKPMITACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQIHFVTLNSNHLKKSIIAHCLVWQTKLGELLRKITESDIDKVYVYVEKSSEDAMKMPADLNQLASAIATYEHLMSDISRVQHTFPPITDQMQTLAKFEVELSSDMVARHENIPVIWAEYLALLEEAKKALELNKDKFKADLLEQAEVFKEAAKTFCEDFYETLPCSSEVTGKDAISQLKAFRDQLNALRAQEQQIRDGLAVFNLTTPVNLDLQKMEKELEKLEEVWGLVFQWEESWEKYKTQTFWEMETDEMEENVMFLFRNFNRLSRQLKDKGWDVIETTRVKVDAFRRTLPLIGDLKNPCMRERHWERIKTLMAVEFDENSEDFKLEVIMRLNFQAYSDEIAEISNAATMELNIENGLKAIREVWKNTTYEMQQHKGEMYRIKNVEDVMQFLEDHQVQLSSMKSTKYVEPFIKEVDYWEKSLGYVAECIEIALQVQRRYLYLESIFCGEDIRKQLPSEVQIFDALTDDWTEITSNMYAGTNAVEACLYNPAPYVYNKLNSMVDNLDGILRALEKYLETKRQLFPRFYFVSNDDMLEILGNSKKPQLIQTHLKKLFDNVNKIRIDKNALGLPVAKAMMSEDGECIEWKYNLVLDGPAEVWLLGLEHTMRVVLREQLILTRAALRKCRYQREQWINDWPGQLGITASKIQWTSDCTRTLCRCEIMNEKKPMKKLRKKQNQILSTLQMMSRKEISKILRCKVNALCVIEIHSRDMVDKMYKLGCMTVSAFEWFSQLKFYWDREREDCYIRQTNTNSIYTYEYIGNSGRLVITPLTDRCYITLTTALHLFRGGSPQGPAGTGKTETTKDLGRALARWVVVTNCSDGLDYKSMAKCFAGIAQSGCWGCFDEFNRINIEVLSVVAQQILAVLLALSLYQKKFVFEGSEIKLDGNCGIFITMNPGYAGRTELPDNLKSMFRPIAMCVPDSLIIAENTLFSDGF…
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517123..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599852))
location: region:1517123-1599852:-1
so has part: feature:1599780-1599852:-1:exon
so has part: feature:1597834-1598262:-1:exon
so has part: feature:1596969-1597250:-1:exon
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so has part: feature:1567750-1567893:-1:exon
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so has part: feature:1563266-1563407:-1:exon
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so has part: feature:1552203-1552321:-1:exon
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so has part: feature:1545301-1545440:-1:exon
so has part: feature:1544757-1544898:-1:exon
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so has part: feature:1542758-1542881:-1:exon
so has part: feature:1541806-1542009:-1:exon
so has part: feature:1540198-1540302:-1:exon
so has part: feature:1539390-1539616:-1:exon
so has part: feature:1537720-1537949:-1:exon
so has part: feature:1536540-1536694:-1:exon
so has part: feature:1535576-1535675:-1:exon
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so has part: feature:1533873-1534095:-1:exon
so has part: feature:1533111-1533286:-1:exon
so has part: feature:1532262-1532432:-1:exon
so has part: feature:1530903-1531102:-1:exon
so has part: feature:1529537-1529700:-1:exon

XP_037870398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1599780-1599852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597834-1598262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596969-1597250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595917-1596511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593866-1594070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593389-1593526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592639-1592785:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1591695-1591817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590565-1590659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590416-1590491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589655-1589780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583279-1583377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582547-1582786:-1:exon

urn:…
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SIO_000628: feature:1581618-1581732:-1:exon

urn:…
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SIO_000628: feature:1580932-1581180:-1:exon

urn:…
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SIO_000628: feature:1579870-1580066:-1:exon

urn:…
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SIO_000628: feature:1579038-1579199:-1:exon

urn:…
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SIO_000628: feature:1578585-1578702:-1:exon

urn:…
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SIO_000628: feature:1578331-1578485:-1:exon

urn:…
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SIO_000628: feature:1577416-1577591:-1:exon

urn:…
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SIO_000628: feature:1575773-1575940:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1575131-1575298:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1573894-1574119:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1573187-1573306:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1572250-1572383:-1:exon

urn:…
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SIO_000628: feature:1570972-1571242:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567750-1567893:-1:exon

urn:…
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SIO_000628: feature:1566928-1567026:-1:exon

urn:…
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SIO_000628: feature:1565912-1566131:-1:exon

urn:…
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SIO_000628: feature:1565260-1565422:-1:exon

urn:…
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SIO_000628: feature:1564394-1564572:-1:exon

urn:…
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SIO_000628: feature:1563849-1564041:-1:exon

urn:…
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SIO_000628: feature:1563266-1563407:-1:exon

urn:…
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SIO_000628: feature:1561718-1561855:-1:exon

urn:…
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SIO_000628: feature:1560489-1560707:-1:exon

urn:…
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SIO_000628: feature:1559602-1559845:-1:exon

urn:…
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SIO_000628: feature:1558524-1558660:-1:exon

urn:…
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SIO_000628: feature:1557895-1558050:-1:exon

urn:…
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SIO_000628: feature:1556320-1556522:-1:exon

urn:…
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SIO_000628: feature:1555427-1555612:-1:exon

urn:…
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SIO_000628: feature:1554518-1554682:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1553728-1553840:-1:exon

urn:…
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SIO_000628: feature:1553389-1553534:-1:exon

urn:…
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SIO_000628: feature:1552664-1552847:-1:exon

urn:…
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SIO_000628: feature:1552203-1552321:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1551644-1551750:-1:exon

urn:…
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SIO_000628: feature:1548534-1548695:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1547712-1547860:-1:exon

urn:…
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SIO_000628: feature:1547092-1547207:-1:exon

urn:…
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SIO_000628: feature:1546139-1546291:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1545301-1545440:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1544757-1544898:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1543531-1543712:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1542758-1542881:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1541806-1542009:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1540198-1540302:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1539390-1539616:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1537720-1537949:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1536540-1536694:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1535576-1535675:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1534777-1534901:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1533873-1534095:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1533111-1533286:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1532262-1532432:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1530903-1531102:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1529537-1529700:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1528215-1528361:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1527348-1527493:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1526600-1526760:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1525703-1525904:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1525249-1525434:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1524180-1524364:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1523528-1523669:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1521447-1521549:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1519601-1519758:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1518622-1518737:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1518017-1518150:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1517123-1517262:-1:exon

LOC101737362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 2, axonemal isoform X1
translation: MEDEFKRPKVAWSDDLSHDSEEERERERLAQLEKELAETPIKPSYDPEELHKLIGYIMRITTLYDLREEDWTEDVKHGIEEWLLEPRSLILCIYFRGDKLKSISDIPLSPVYDLTYFIRAPDFVFKSDTFHDDIIFGTFVDSVESNVIQILENVYAPYFFAVNAWPDSVKSEFCSQIHTFLAKLTDMYYKMLGLTVLYIPREGQQLTFEQASADRELVKRLEGVVVYWTHQIKSCLEDHAFVASQKELLCPSDEYDFWIYRHENLNALLYQLKNPAVRHITKTLVTTHSTFIHQFQTLCQEVIQKINEATSNIEYLQVIKQPCAILECVIDPDEIAKHVPQIINLFRFIWMESPYYNSEARITNLFKALSNQIIILCRNYVNLDELFEGETKKALGEFTKCIECCKKYREIYDTMAEAHCDSKPDSWNLDTGSIFNYIDSFVQRCFDMLEVCNCMIIFGRIDELEHINKPMFSGARGDQFEAKCDQIEHMFQDALLNVRRVSRAILDVQAPAWYDDILQFRTVIKDIEIIIENLVESVFEGVNHVEEAVVALFSLNNYSKRKSLKRIFKKKTAEVWAMFSDEVQEAKKDMVSNRGQFPADLPSFAGRAIVLKTRKNRLVYLKKVMTDASVWMMACSNSEDVIMHVNRLMGAIDVAIRELWISWTHNLDEKCSAGLNRTLMRKSAENLGLLECNIDMNILDLCKEAAHWENLGQDIPLHAYQVYMKSKTIYYVYESVLAVVKGYNKIIDSLSDDERLLFKPMITACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQIHFVTLNSNHLKKSIIAHCLVWQTKLGELLRKITESDIDKVYVYVEKSSEDAMKMPADLNQLASAIATYEHLMSDISRVQHTFPPITDQMQTLAKFEVELSSDMVARHENIPVIWAEYLALLEEAKKALELNKDKFKADLLEQAEVFKEAAKTFCEDFYETLPCSSEVTGKDAISQLKAFRDQLNALRAQEQQIRDGLAVFNLTTPVNLDLQKMEKELEKLEEVWGLVFQWEESWEKYKTQTFWEMETDEMEENVMFLFRNFNRLSRQLKDKGWDVIETTRVKVDAFRRTLPLIGDLKNPCMRERHWERIKTLMAVEFDENSEDFKLEVIMRLNFQAYSDEIAEISNAATMELNIENGLKAIREVWKNTTYEMQQHKGEMYRIKNVEDVMQFLEDHQVQLSSMKSTKYVEPFIKEVDYWEKSLGYVAECIEIALQVQRRYLYLESIFCGEDIRKQLPSEVQIFDALTDDWTEITSNMYAGTNAVEACLYNPAPYVYNKLNSMVDNLDGILRALEKYLETKRQLFPRFYFVSNDDMLEILGNSKKPQLIQTHLKKLFDNVNKIRIDKNALGLPVAKAMMSEDGECIEWKYNLVLDGPAEVWLLGLEHTMRVVLREQLILTRAALRKCRYQREQWINDWPGQLGITASKIQWTSDCTRTLCRCEIMNEKKPMKKLRKKQNQILSTLQMMSRKEISKILRCKVNALCVIEIHSRDMVDKMYKLGCMTVSAFEWFSQLKFYWDREREDCYIRQTNTNSIYTYEYIGNSGRLVITPLTDRCYITLTTALHLFRGGSPQGPAGTGKTETTKDLGRALARWVVVTNCSDGLDYKSMAKCFAGIAQSGCWGCFDEFNRINIEVLSVVAQQILAVLLALSLYQKKFVFEGSEIKLDGNCGIFITMNPGYAGRTELPDNLKSMFRPIAMCVPDSLIIAENTLFSDGF…
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1517123..1517262,1518017..1518150,1518622..1518737,1519601..1519758,1521447..1521549,1522159..1522407,1523528..1523669,1524180..1524364,1525249..1525434,1525703..1525904,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599852))
location: region:1517123-1599852:-1
so has part: feature:1599780-1599852:-1:exon
so has part: feature:1597834-1598262:-1:exon
so has part: feature:1596969-1597250:-1:exon
so has part: feature:1595917-1596511:-1:exon
so has part: feature:1593866-1594070:-1:exon
so has part: feature:1593389-1593526:-1:exon
so has part: feature:1592639-1592785:-1:exon
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so has part: feature:1582547-1582786:-1:exon
so has part: feature:1581618-1581732:-1:exon
so has part: feature:1580932-1581180:-1:exon
so has part: feature:1579870-1580066:-1:exon
so has part: feature:1579038-1579199:-1:exon
so has part: feature:1578585-1578702:-1:exon
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so has part: feature:1575773-1575940:-1:exon
so has part: feature:1575131-1575298:-1:exon
so has part: feature:1573894-1574119:-1:exon
so has part: feature:1573187-1573306:-1:exon
so has part: feature:1572250-1572383:-1:exon
so has part: feature:1570972-1571242:-1:exon
so has part: feature:1567750-1567893:-1:exon
so has part: feature:1566928-1567026:-1:exon
so has part: feature:1565912-1566131:-1:exon
so has part: feature:1565260-1565422:-1:exon
so has part: feature:1564394-1564572:-1:exon
so has part: feature:1563849-1564041:-1:exon
so has part: feature:1563266-1563407:-1:exon
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so has part: feature:1560489-1560707:-1:exon
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so has part: feature:1554518-1554682:-1:exon
so has part: feature:1553728-1553840:-1:exon
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so has part: feature:1552664-1552847:-1:exon
so has part: feature:1552203-1552321:-1:exon
so has part: feature:1551644-1551750:-1:exon
so has part: feature:1548534-1548695:-1:exon
so has part: feature:1547712-1547860:-1:exon
so has part: feature:1547092-1547207:-1:exon
so has part: feature:1546139-1546291:-1:exon
so has part: feature:1545301-1545440:-1:exon
so has part: feature:1544757-1544898:-1:exon
so has part: feature:1543531-1543712:-1:exon
so has part: feature:1542758-1542881:-1:exon
so has part: feature:1541806-1542009:-1:exon
so has part: feature:1540198-1540302:-1:exon
so has part: feature:1539390-1539616:-1:exon
so has part: feature:1537720-1537949:-1:exon
so has part: feature:1536540-1536694:-1:exon
so has part: feature:1535576-1535675:-1:exon
so has part: feature:1534777-1534901:-1:exon
so has part: feature:1533873-1534095:-1:exon
so has part: feature:1533111-1533286:-1:exon
so has part: feature:1532262-1532432:-1:exon
so has part: feature:1530903-1531102:-1:exon
so has part: feature:1529537-1529700:-1:exon

XP_037870396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1599780-1599852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597834-1598262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596969-1597250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595917-1596511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593866-1594070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593389-1593526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592639-1592785:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1591695-1591817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590565-1590659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590416-1590491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589655-1589780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583279-1583377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582547-1582786:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581618-1581732:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1580932-1581180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1579870-1580066:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1579038-1579199:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1578585-1578702:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578331-1578485:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577416-1577591:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1575773-1575940:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1575131-1575298:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1573894-1574119:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1573187-1573306:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1572250-1572383:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1570972-1571242:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567750-1567893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1566928-1567026:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1565912-1566131:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1565260-1565422:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1564394-1564572:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1563849-1564041:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1563266-1563407:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1561718-1561855:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1560489-1560707:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1559602-1559845:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1558524-1558660:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1557895-1558050:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1556320-1556522:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1555427-1555612:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1554518-1554682:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1553728-1553840:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1553389-1553534:-1:exon

urn:…
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SIO_000628: feature:1552664-1552847:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1552203-1552321:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1551644-1551750:-1:exon

urn:…
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SIO_000628: feature:1548534-1548695:-1:exon

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SIO_000628: feature:1547712-1547860:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:1544757-1544898:-1:exon

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SIO_000628: feature:1533873-1534095:-1:exon

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SIO_000628: feature:1530903-1531102:-1:exon

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urn:…
SIO_000300: 72
SIO_000628: feature:1524180-1524364:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1523528-1523669:-1:exon

urn:…
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SIO_000628: feature:1522159-1522407:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1521447-1521549:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1519601-1519758:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1518622-1518737:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1518017-1518150:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1517123-1517262:-1:exon

LOC101737362
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005245290.1
SIO_010081: LOC101737362
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LOC101737362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038014471.1
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
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urn:…
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SIO_000628: feature:1525762-1525936:-1:exon

position:1525936:-1
position: 1525936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101737362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101737362
product: dynein heavy chain 2, axonemal, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038014472.1
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1525800..1525936,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599943))
location: region:1525800-1599943:-1
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position:1525800:-1
position: 1525800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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LOC101737362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 2, axonemal isoform X4
translation: MEDEFKRPKVAWSDDLSHDSEEERERERLAQLEKELAETPIKPSYDPEELHKLIGYIMRITTLYDLREEDWTEDVKHGIEEWLLEPRSLILCIYFRGDKLKSISDIPLSPVYDLTYFIRAPDFVFKSDTFHDDIIFGTFVDSVESNVIQILENVYAPYFFAVNAWPDSVKSEFCSQIHTFLAKLTDMYYKMLGLTVLYIPREGQQLTFEQASADRELVKRLEGVVVYWTHQIKSCLEDHAFVASQKELLCPSDEYDFWIYRHENLNALLYQLKNPAVRHITKTLVTTHSTFIHQFQTLCQEVIQKINEATSNIEYLQVIKQPCAILECVIDPDEIAKHVPQIINLFRFIWMESPYYNSEARITNLFKALSNQIIILCRNYVNLDELFEGETKKALGEFTKCIECCKKYREIYDTMAEAHCDSKPDSWNLDTGSIFNYIDSFVQRCFDMLEVCNCMIIFGRIDELEHINKPMFSGARGDQFEAKCDQIEHMFQDALLNVRRVSRAILDVQAPAWYDDILQFRTVIKDIEIIIENLVESVFEGVNHVEEAVVALFSLNNYSKRKSLKRIFKKKTAEVWAMFSDEVQEAKKDMVSNRGQFPADLPSFAGRAIVLKTRKNRLVYLKKVMTDASVWMMACSNSEDVIMHVNRLMGAIDVAIRELWISWTHNLDEKCSAGLNRTLMRKSAENLGLLECNIDMNILDLCKEAAHWENLGQDIPLHAYQVYMKSKTIYYVYESVLAVVKGYNKIIDSLSDDERLLFKPMITACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQIHFVTLNSNHLKKSIIAHCLVWQTKLGELLRKITESDIDKVYVYVEKSSEDAMKMPADLNQLASAIATYEHLMSDISRVQHTFPPITDQMQTLAKFEVELSSDMVARHENIPVIWAEYLALLEEAKKALELNKDKFKADLLEQAEVFKEAAKTFCEDFYETLPCSSEVTGKDAISQLKAFRDQLNALRAQEQQIRDGLAVFNLTTPVNLDLQKMEKELEKLEEVWGLVFQWEESWEKYKTQTFWEMETDEMEENVMFLFRNFNRLSRQLKDKGWDVIETTRVKVDAFRRTLPLIGDLKNPCMRERHWERIKTLMAVEFDENSEDFKLEVIMRLNFQAYSDEIAEISNAATMELNIENGLKAIREVWKNTTYEMQQHKGEMYRIKNVEDVMQFLEDHQVQLSSMKSTKYVEPFIKEVDYWEKSLGYVAECIEIALQVQRRYLYLESIFCGEDIRKQLPSEVQIFDALTDDWTEITSNMYAGTNAVEACLYNPAPYVYNKLNSMVDNLDGILRALEKYLETKRQLFPRFYFVSNDDMLEILGNSKKPQLIQTHLKKLFDNVNKIRIDKNALGLPVAKAMMSEDGECIEWKYNLVLDGPAEVWLLGLEHTMRVVLREQLILTRAALRKCRYQREQWINDWPGQLGITASKIQWTSDCTRTLCRCEIMNEKKPMKKLRKKQNQILSTLQMMSRKEISKILRCKVNALCVIEIHSRDMVDKMYKLGCMTVSAFEWFSQLKFYWDREREDCYIRQTNTNSIYTYEYIGNSGRLVITPLTDRCYITLTTALHLFRGGSPQGPAGTGKTETTKDLGRALARWVVVTNCSDGLDYKSMAKCFAGIAQSGCWGCFDEFNRINIEVLSVVAQQILAVLLALSLYQKKFVFEGSEIKLDGNCGIFITMNPGYAGRTELPDNLKSMFRPIAMCVPDSLIIAENTLFSDGF…
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1525897..1525936,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1530903..1531102,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599852))
location: region:1525897-1599852:-1
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so has part: feature:1541806-1542009:-1:exon
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so has part: feature:1539390-1539616:-1:exon
so has part: feature:1537720-1537949:-1:exon
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so has part: feature:1535576-1535675:-1:exon
so has part: feature:1534777-1534901:-1:exon
so has part: feature:1533873-1534095:-1:exon
so has part: feature:1533111-1533286:-1:exon
so has part: feature:1532262-1532432:-1:exon
so has part: feature:1530903-1531102:-1:exon
so has part: feature:1529537-1529700:-1:exon

XP_037870399.1
type: Protein
SIO_000068: ncbiprotein

position:1525897:-1
position: 1525897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1599780-1599852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597834-1598262:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 24
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 33
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urn:…
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urn:…
SIO_000300: 35
SIO_000628: feature:1560489-1560707:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1559602-1559845:-1:exon

urn:…
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SIO_000628: feature:1558524-1558660:-1:exon

urn:…
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SIO_000628: feature:1557895-1558050:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1556320-1556522:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 43
SIO_000628: feature:1553389-1553534:-1:exon

urn:…
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SIO_000628: feature:1552664-1552847:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 64
SIO_000628: feature:1532262-1532432:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1530903-1531102:-1:exon

urn:…
SIO_000300: 66
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urn:…
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urn:…
SIO_000300: 68
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urn:…
SIO_000300: 69
SIO_000628: feature:1526600-1526760:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1525897-1525936:-1:exon

LOC101737362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101737362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 2, axonemal isoform X5
translation: MEDEFKRPKVAWSDDLSHDSEEERERERLAQLEKELAETPIKPSYDPEELHKLIGYIMRITTLYDLREEDWTEDVKHGIEEWLLEPRSLILCIYFRGDKLKSISDIPLSPVYDLTYFIRAPDFVFKSDTFHDDIIFGTFVDSVESNVIQILENVYAPYFFAVNAWPDSVKSEFCSQIHTFLAKLTDMYYKMLGLTVLYIPREGQQLTFEQASADRELVKRLEGVVVYWTHQIKSCLEDHAFVASQKELLCPSDEYDFWIYRHENLNALLYQLKNPAVRHITKTLVTTHSTFIHQFQTLCQEVIQKINEATSNIEYLQVIKQPCAILECVIDPDEIAKHVPQIINLFRFIWMESPYYNSEARITNLFKALSNQIIILCRNYVNLDELFEGETKKALGEFTKCIECCKKYREIYDTMAEAHCDSKPDSWNLDTGSIFNYIDSFVQRCFDMLEVCNCMIIFGRIDELEHINKPMFSGARGDQFEAKCDQIEHMFQDALLNVRRVSRAILDVQAPAWYDDILQFRTVIKDIEIIIENLVESVFEGVNHVEEAVVALFSLNNYSKRKSLKRIFKKKTAEVWAMFSDEVQEAKKDMVSNRGQFPADLPSFAGRAIVLKTRKNRLVYLKKVMTDASVWMMACSNSEDVIMHVNRLMGAIDVAIRELWISWTHNLDEKCSAGLNRTLMRKSAENLGLLECNIDMNILDLCKEAAHWENLGQDIPLHAYQVYMKSKTIYYVYESVLAVVKGYNKIIDSLSDDERLLFKPMITACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQIHFVTLNSNHLKKSIIAHCLVWQTKLGELLRKITESDIDKVYVYVEKSSEDAMKMPADLNQLASAIATYEHLMSDISRVQHTFPPITDQMQTLAKFEVELSSDMVARHENIPVIWAEYLALLEEAKKALELNKDKFKADLLEQAEVFKEAAKTFCEDFYETLPCSSEVTGKDAISQLKAFRDQLNALRAQEQQIRDGLAVFNLTTPVNLDLQKMEKELEKLEEVWGLVFQWEESWEKYKTQTFWEMETDEMEENVMFLFRNFNRLSRQLKDKGWDVIETTRVKVDAFRRTLPLIGDLKNPCMRERHWERIKTLMAVEFDENSEDFKLEVIMRLNFQAYSDEIAEISNAATMELNIENGLKAIREVWKNTTYEMQQHKGEMYRIKNVEDVMQFLEDHQVQLSSMKSTKYVEPFIKEVDYWEKSLGYVAECIEIALQVQRRYLYLESIFCGEDIRKQLPSEVQIFDALTDDWTEITSNMYAGTNAVEACLYNPAPYVYNKLNSMVDNLDGILRALEKYLETKRQLFPRFYFVSNDDMLEILGNSKKPQLIQTHLKKLFDNVNKIRIDKNALGLPVAKAMMSEDGECIEWKYNLVLDGPAEVWLLGLEHTMRVVLREQLILTRAALRKCRYQREQWINDWPGQLGITASKIQWTSDCTRTLCRCEIMNEKKPMKKLRKKQNQILSTLQMMSRKEISKILRCKVNALCVIEIHSRDMVDKMYKLGCMTVSAFEWFSQLKFYWDREREDCYIRQTNTNSIYTYEYIGNSGRLVITPLTDRCYITLTTALHLFRGGSPQGPAGTGKTETTKDLGRALARWVVVTNCSDGLDYKSMAKCFAGIAQSGCWGCFDEFNRINIEVLSVVAQQILAVLLALSLYQKKFVFEGSEIKLDGNCGIFITMNPGYAGRTELPDNLKSMFRPIAMCVPDSLIIAENTLFSDGF…
SIO_010081: LOC101737362
subclass of: SO_0000673
so part of: LOC101737362
location: complement(join(1525925..1525936,1526600..1526760,1527348..1527493,1528215..1528361,1529537..1529700,1532262..1532432,1533111..1533286,1533873..1534095,1534777..1534901,1535576..1535675,1536540..1536694,1537720..1537949,1539390..1539616,1540198..1540302,1541806..1542009,1542758..1542881,1543531..1543712,1544757..1544898,1545301..1545440,1546139..1546291,1547092..1547207,1547712..1547860,1548534..1548695,1551644..1551750,1552203..1552321,1552664..1552847,1553389..1553534,1553728..1553840,1554518..1554682,1555427..1555612,1556320..1556522,1557895..1558050,1558524..1558660,1559602..1559845,1560489..1560707,1561718..1561855,1563266..1563407,1563849..1564041,1564394..1564572,1565260..1565422,1565912..1566131,1566928..1567026,1567750..1567893,1570972..1571242,1572250..1572383,1573187..1573306,1573894..1574119,1575131..1575298,1575773..1575940,1577416..1577591,1578331..1578485,1578585..1578702,1579038..1579199,1579870..1580066,1580932..1581180,1581618..1581732,1582547..1582786,1583279..1583377,1589655..1589780,1590416..1590491,1590565..1590659,1591695..1591817,1592639..1592785,1593389..1593526,1593866..1594070,1595917..1596511,1596969..1597250,1597834..1598262,1599780..1599852))
location: region:1525925-1599852:-1
so has part: feature:1599780-1599852:-1:exon
so has part: feature:1597834-1598262:-1:exon
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so has part: feature:1552203-1552321:-1:exon
so has part: feature:1551644-1551750:-1:exon
so has part: feature:1548534-1548695:-1:exon
so has part: feature:1547712-1547860:-1:exon
so has part: feature:1547092-1547207:-1:exon
so has part: feature:1546139-1546291:-1:exon
so has part: feature:1545301-1545440:-1:exon
so has part: feature:1544757-1544898:-1:exon
so has part: feature:1543531-1543712:-1:exon
so has part: feature:1542758-1542881:-1:exon
so has part: feature:1541806-1542009:-1:exon
so has part: feature:1540198-1540302:-1:exon
so has part: feature:1539390-1539616:-1:exon
so has part: feature:1537720-1537949:-1:exon
so has part: feature:1536540-1536694:-1:exon
so has part: feature:1535576-1535675:-1:exon
so has part: feature:1534777-1534901:-1:exon
so has part: feature:1533873-1534095:-1:exon
so has part: feature:1533111-1533286:-1:exon
so has part: feature:1532262-1532432:-1:exon
so has part: feature:1529537-1529700:-1:exon
so has part: feature:1528215-1528361:-1:exon

XP_037870400.1
type: Protein
SIO_000068: ncbiprotein

position:1525925:-1
position: 1525925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1599780-1599852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597834-1598262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596969-1597250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595917-1596511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593866-1594070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593389-1593526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592639-1592785:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1591695-1591817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590565-1590659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590416-1590491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589655-1589780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583279-1583377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582547-1582786:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581618-1581732:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1580932-1581180:-1:exon

urn:…
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SIO_000628: feature:1579870-1580066:-1:exon

urn:…
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SIO_000628: feature:1579038-1579199:-1:exon

urn:…
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SIO_000628: feature:1578585-1578702:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1577416-1577591:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1575773-1575940:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1575131-1575298:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1573894-1574119:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1573187-1573306:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1572250-1572383:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1570972-1571242:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567750-1567893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1566928-1567026:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1565912-1566131:-1:exon

urn:…
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SIO_000628: feature:1565260-1565422:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1564394-1564572:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1563849-1564041:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1563266-1563407:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1561718-1561855:-1:exon

urn:…
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SIO_000628: feature:1560489-1560707:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1559602-1559845:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1558524-1558660:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1557895-1558050:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1556320-1556522:-1:exon

urn:…
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SIO_000628: feature:1555427-1555612:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1554518-1554682:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1553728-1553840:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1553389-1553534:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1552664-1552847:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1552203-1552321:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1551644-1551750:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1548534-1548695:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1547712-1547860:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1547092-1547207:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1546139-1546291:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1545301-1545440:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1544757-1544898:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1543531-1543712:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1542758-1542881:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1541806-1542009:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1540198-1540302:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1539390-1539616:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1537720-1537949:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1536540-1536694:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1535576-1535675:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1534777-1534901:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1533873-1534095:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1533111-1533286:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1532262-1532432:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1529537-1529700:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1528215-1528361:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1527348-1527493:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1526600-1526760:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1525925-1525936:-1:exon

LOC101743463
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1567997..1569979)
location: region:1567997-1569979:-1
so has part: feature:1567997-1569979:-1:exon
subclass of: SO_0000010

101743463
type: Gene
SIO_000068: ncbigene

position:1567997:-1
position: 1567997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569979:-1
position: 1569979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567997-1569979:-1:exon

LOC101743463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7091
gene: LOC101743463
product: uncharacterized LOC101743463
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_004929355.4
SIO_010081: LOC101743463
subclass of: SO_0000673
so part of: LOC101743463
location: complement(join(1567997..1568898,1569116..1569388,1569670..1569979))
location: region:1567997-1569979:-1
so has part: feature:1569670-1569979:-1:exon
so has part: feature:1569116-1569388:-1:exon
so has part: feature:1567997-1568898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569670-1569979:-1:exon

position:1569670:-1
position: 1569670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1569116-1569388:-1:exon

position:1569116:-1
position: 1569116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569388:-1
position: 1569388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1567997-1568898:-1:exon

position:1568898:-1
position: 1568898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101743463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7091
gene: LOC101743463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101743463
translation: MLDKELLDKCYFIPKDVMLKVLAMLESSTPWKSTSDICRRNLASIQGFRSSPKFRDDSLAPHGLKSLHHLALNKAIYAQDWDKLLYVLKKIPPWKFKFSRPSHAAVYYRAMTILLLNHPTAQANSLMNEFLHMVLSCRSDADKKAILKILLSLPSKRHTQ
SIO_010081: LOC101743463
subclass of: SO_0000673
so part of: LOC101743463
location: complement(join(1568743..1568898,1569116..1569388,1569670..1569723))
location: region:1568743-1569723:-1
so has part: feature:1569670-1569723:-1:exon
so has part: feature:1569116-1569388:-1:exon
so has part: feature:1568743-1568898:-1:exon

XP_004929412.1
type: Protein
SIO_000068: ncbiprotein

position:1568743:-1
position: 1568743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569723:-1
position: 1569723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569670-1569723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569116-1569388:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568743-1568898:-1:exon

LOC101743320
type: Gene
subclass of: SO_0000704
RO_0002162: 7091
gene: LOC101743320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1585155..1588110
location: region:1585155-1588110:1
so has part: feature:1585155-1588110:1:exon
subclass of: SO_0000010

101743320
type: Gene
SIO_000068: ncbigene