Desulfomonile tiedjei DSM 6799 plasmid pDESTI.01, complete sequence.
type: Entry
definition: Desulfomonile tiedjei DSM 6799 plasmid pDESTI.01, complete sequence.
sequence version: NC_018026.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NC_018026.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02232013
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Desulfomonile tiedjei DSM 6799
organism: Desulfomonile tiedjei DSM 6799
taxonomy: Bacteria; Thermodesulfobacteriota; Desulfomonilia; Desulfomonilales; Desulfomonilaceae; Desulfomonile.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003361.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4086745\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Desulfomonile tiedjei DSM 6799\ncollection_date :: Missing\nlat_lon :: Missing\ndepth :: Missing\nalt_elev :: Missing\ncountry :: USA\nenvironment :: Sludge\nnum_replicons :: 2\nref_biomaterial :: DSM 06799, ATCC 49306\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Anaerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi03016\nType Strain :: Yes\nGreengenes ID :: 140135\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: Prodigal, GenePRIMP\nIsolation Site :: Sewage sludge; USA\nTemperature Range :: Mesophile\nTemperature Optimum :: 37C\nGram Staining :: Gram-\nDiseases :: None\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Fini…

sequence
subclass of: SO_0000155
sequence length: 26923
topology: circular
so has quality: SO_0000988
location: 1..26923
location: region:1-26923:1
RO_0002162: 706587

NC_018026
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02232013
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid of Desulfomonile tiedjei DSM 6799
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Zeytun, A.
author: Lu, M.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Spring, S.
author: Schroeder, M.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Zeytun, A.
author: Lu, M.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Spring, S.
author: Schroeder, M.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (05-JUN-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26923:1
position: 26923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26923:1:source
so part of: sequence
organism: Desulfomonile tiedjei DSM 6799
mol type: genomic DNA
strain: DSM 6799
isolation source: sewage sludge
culture collection: DSM:6799
type material: type strain of Desulfomonile tiedjei
plasmid: pDESTI.01
country: USA

706587
type: Taxonomy
SIO_000068: taxonomy

DESTI_RS28030
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28030
so part of: sequence
location: complement(1507..1797)
location: region:1507-1797:-1
so has part: feature:1507-1797:-1:exon
subclass of: SO_0000010

position:1507:-1
position: 1507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797:-1
position: 1797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1507-1797:-1:exon

DESTI_RS28030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANGERRGEWLSLSLRRFLRNVLLSESTLGSVRFGGDDPVGLRNGNSEQKDEFELVTNAMNGSIVSISLDERGITLHGNAFFSQYSSKKMAIFSRG
SIO_010081: DESTI_RS28030
subclass of: SO_0000673
so part of: DESTI_RS28030
location: complement(1507..1797)
location: region:1507-1797:-1
so has part: feature:1507-1797:-1:exon

WP_157212410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1507-1797:-1:exon

DESTI_RS28035
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28035
old locus tag: Desti_5645
so part of: sequence
location: 2181..2834
location: region:2181-2834:1
so has part: feature:2181-2834:1:exon
subclass of: SO_0000010

position:2181:1
position: 2181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834:1
position: 2834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2181-2834:1:exon

DESTI_RS28035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28035
old locus tag: Desti_5645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014810018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSANGNGQFREDELVSRRVKVGQEWQTRVFPVVGGRLRILHESNDQISIQTEIVRLDNDFVVVKAAVESQRGRFNGTGTASGQRDARLADSLVELAETRAIARALRFGGIGVEYTGAEEVSHVVGEPRRYQDQDKEPESVFPEDKGESKPETKPAGNGKGTVTQAQCRALWALTKKARYTDEDIESILRPLNASTFQELTRESASQLISYLQTEVAA
SIO_010081: DESTI_RS28035
subclass of: SO_0000673
so part of: DESTI_RS28035
location: 2181..2834
location: region:2181-2834:1
so has part: feature:2181-2834:1:exon

WP_014813301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2181-2834:1:exon

DESTI_RS28040
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28040
old locus tag: Desti_5646
so part of: sequence
location: 3079..3840
location: region:3079-3840:1
so has part: feature:3079-3840:1:exon
subclass of: SO_0000010

position:3079:1
position: 3079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3840:1
position: 3840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079-3840:1:exon

DESTI_RS28040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28040
old locus tag: Desti_5646
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014811196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MKTAQDHDHLSYSQINCFLTCSLRYKFQYVDKIPPAFTAVSLAFGVAIHEAAAAYYQTRLEGDELKPDQLWDVYRDCWQRAEKIKFFNGDSEKSLMDKAKNMLTVFHESRDPSITVLGVEEYFQLPLGGLPPFEGYIDLIEQAPDGTITLVDLKTAAKKLSDSNAQSSMQLTAYALGAETLGFDPAINMRLDVVTKTKSPEMLRYETTRTDEERNRFVKLVYGVWNAIEREAFFPREDWHCAQCPWTQNCREW
SIO_010081: DESTI_RS28040
subclass of: SO_0000673
so part of: DESTI_RS28040
location: 3079..3840
location: region:3079-3840:1
so has part: feature:3079-3840:1:exon

WP_014813302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079-3840:1:exon

DESTI_RS28045
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28045
old locus tag: Desti_5647
so part of: sequence
location: 3853..4167
location: region:3853-4167:1
so has part: feature:3853-4167:1:exon
subclass of: SO_0000010

position:3853:1
position: 3853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4167:1
position: 4167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3853-4167:1:exon

DESTI_RS28045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28045
old locus tag: Desti_5647
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014811247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKPKDTARRVTDVIALQPMNQMNVLPPDSGVIGSFLDNVRNTFKARAMRMNGLLKRVDETGQRMEGLLRMAAERAEAAESALEQNLLKEGLLPEISHKDPDEE
SIO_010081: DESTI_RS28045
subclass of: SO_0000673
so part of: DESTI_RS28045
location: 3853..4167
location: region:3853-4167:1
so has part: feature:3853-4167:1:exon

WP_014813303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3853-4167:1:exon

DESTI_RS28050
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
gene: rnhA
locus tag: DESTI_RS28050
old locus tag: Desti_5649
so part of: sequence
location: complement(4670..5113)
location: region:4670-5113:-1
so has part: feature:4670-5113:-1:exon
subclass of: SO_0000010

position:4670:-1
position: 4670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5113:-1
position: 5113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670-5113:-1:exon

DESTI_RS28050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
gene: rnhA
locus tag: DESTI_RS28050
old locus tag: Desti_5649
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008291167.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MDHIVVEIFTDGACSGNPGPGGWAAIIRKNGTEEELTGGEPATTNQRMELMPAIVALSSLNSPSKVRLYSDSQYLIKGMNEWIEGWKSRGWRKSNNKPVENPDLWKRLDAIAARHQVEWIKVKGHDNHPENERVDRLAVQAIERFRN
SIO_010081: DESTI_RS28050
subclass of: SO_0000673
so part of: DESTI_RS28050
location: complement(4670..5113)
location: region:4670-5113:-1
so has part: feature:4670-5113:-1:exon

WP_237671513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4670-5113:-1:exon

DESTI_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28055
old locus tag: Desti_5650
so part of: sequence
location: complement(5185..6150)
location: region:5185-6150:-1
so has part: feature:5185-6150:-1:exon
subclass of: SO_0000010

position:5185:-1
position: 5185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6150:-1
position: 6150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185-6150:-1:exon

DESTI_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28055
old locus tag: Desti_5650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011417627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MKFSREFLLTESESTGFRPEILEKVFHLIGLLNGFNSHPFLKERLALKGGTALNLFLFDLPRLSVDIDLNYVGSPNRETMLSERPKIEEAVIAVSGREGLSVRRSTEEHAAITFFLRYESVLGQGGDLKVDLNFMFRVPLWPLVKMDSRRIGPYGVESVPILDIHELAGGKLAALLARRASRDLFDVHALLTGSGLDPHRLRLAFVVYGAINRKDWRSVQVSDVDFTERELKKELMPLLRKEAQELEYVTQWAERLVEETRKALESLLPFTEEEREFLDRLLDHGEIMPALLTGDGELAKRLGEHPGLQWKALNVRQFKGR
SIO_010081: DESTI_RS28055
subclass of: SO_0000673
so part of: DESTI_RS28055
location: complement(5185..6150)
location: region:5185-6150:-1
so has part: feature:5185-6150:-1:exon

WP_014813306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5185-6150:-1:exon

DESTI_RS28060
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28060
old locus tag: Desti_5651
so part of: sequence
location: complement(6147..6947)
location: region:6147-6947:-1
so has part: feature:6147-6947:-1:exon
subclass of: SO_0000010

position:6147:-1
position: 6147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947:-1
position: 6947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6147-6947:-1:exon

DESTI_RS28060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28060
old locus tag: Desti_5651
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014810120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKLLDFFAKHPVFTYEEFAAFLDAEGSRSVKTRDSLLAHHTKTGRILRVRRGLYASVPFGASPDTFPVDTFLLAGKMAEDAVLAYHTALEFFGKAQSVQERFLFLTGKAIRPVNFRGFEFRGVRFPKTLVRQRQEFFAVDAAERGGLPIRVTSLERTLVDILDRPDLGGGWEEIWRSLESVEFFDMDNVLDYTLLLDNASVAAKVGLYLEQHQKDLMVDDAHLDRLRQCIPKQPTYMARNSKGRLVKEWNLVVPSQVLDRSWEEIS
SIO_010081: DESTI_RS28060
subclass of: SO_0000673
so part of: DESTI_RS28060
location: complement(6147..6947)
location: region:6147-6947:-1
so has part: feature:6147-6947:-1:exon

WP_014813307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6147-6947:-1:exon

DESTI_RS28065
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28065
old locus tag: Desti_5652
so part of: sequence
location: 7164..7955
location: region:7164-7955:1
so has part: feature:7164-7955:1:exon
subclass of: SO_0000010

position:7164:1
position: 7164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7955:1
position: 7955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7164-7955:1:exon

DESTI_RS28065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28065
old locus tag: Desti_5652
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAHIIAFANQKGGVGKTASVISLAHALAMREKKVLVIDLDPQGNSSRILGKLLPSEQPRTVIDLFTKKTAIVSNTCVDSQIKGVKLVPSYLKLFEIERSMKEIERLSTLRAKVDRAALEEFDFVLVDTPPNLGTFLLNALIIADYVIIPIDAESIFAVEGLDGLLETISDVKSTLNPKLKLLKVLLTMVDGRTNTSRIIREQVTRAFDEEQVFRTTITKNTSVNKAHLQGVTVFQDDRKALAAKDYMKVAEELLECLNSSNNS
SIO_010081: DESTI_RS28065
subclass of: SO_0000673
so part of: DESTI_RS28065
location: 7164..7955
location: region:7164-7955:1
so has part: feature:7164-7955:1:exon

WP_014813308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7164-7955:1:exon

DESTI_RS28070
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28070
old locus tag: Desti_5653
so part of: sequence
location: 7928..8452
location: region:7928-8452:1
so has part: feature:7928-8452:1:exon
subclass of: SO_0000010

position:7928:1
position: 7928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8452:1
position: 8452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7928-8452:1:exon

DESTI_RS28070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28070
old locus tag: Desti_5653
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQFLQQLLSKAKEKADALEQGPSRKKNRDSIDTRSVSDTPAVSDLVPVSDPPRVSDTGHVQSSHSLFSAYVTLQSKIHEHLPAMSPSELRLYLYLVDLAFGKSYPSDGVVEYNQREVMKSVGFGSHSTAVKVISSLTEKNLVTWICKASKRGEKSLLRVILPPDLPDHEPPSF
SIO_010081: DESTI_RS28070
subclass of: SO_0000673
so part of: DESTI_RS28070
location: 7928..8452
location: region:7928-8452:1
so has part: feature:7928-8452:1:exon

WP_014813309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7928-8452:1:exon

DESTI_RS28075
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28075
old locus tag: Desti_5654
so part of: sequence
location: 8880..10085
location: region:8880-10085:1
so has part: feature:8880-10085:1:exon
subclass of: SO_0000010

position:8880:1
position: 8880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10085:1
position: 10085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8880-10085:1:exon

DESTI_RS28075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28075
old locus tag: Desti_5654
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSRISQCISSPIDSSIPFSILDLKAQAVRLPVSKGAQILLSELLTWSGERGYCWWSKEAIAKDLKWSSSSVWRRTAELQEAGFLASIPRPGRSNYWVPLPGPAKMARLENELTPVADSRYPLEKKIEKTQKRCTVHQPSTGTEQLPPSPLPANDNASKISELESRITKLEQTLPTPRSKAPIPENVVHSSNPQRSSSSAPLKPNLSPEDRLLLQDIEETCHDFHSRGCFINIIREYPEETIRAALSVTRETLATVSGTNGGAYFLATLRGMAAVCAAEDSPQPKTHPSHWSESEVIRPVAPCVQPRERTPATGMSGQAATSPPLPEPEQPDPAALIKGWRLLYEPGNVQRMLSGIKRCFSQCDVHKIWENLKGEMIHLTEEGLVSEFLDLMAMKVCYGTPT
SIO_010081: DESTI_RS28075
subclass of: SO_0000673
so part of: DESTI_RS28075
location: 8880..10085
location: region:8880-10085:1
so has part: feature:8880-10085:1:exon

WP_014813310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8880-10085:1:exon

DESTI_RS28080
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28080
old locus tag: Desti_5655
so part of: sequence
location: 10215..11054
location: region:10215-11054:1
so has part: feature:10215-11054:1:exon
subclass of: SO_0000010

position:10215:1
position: 10215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11054:1
position: 11054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10215-11054:1:exon

DESTI_RS28080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28080
old locus tag: Desti_5655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKQISFPDEARHAVRSALMDTYERQEELEQAIKSLKRFRKIATELEKYVSKGWPFHVLSLMEKQDEFIRQQCDAGAFSLQDLEKLRAAAQEQAKKLRIRYPNYLELACREAGLPLDMSSRYPVYTFEKGFFELTIDRGGTATLSNSERKLGEFPADIGAVVAKLAEEHERIFARPYDGRYFLKKLREHYLGVIQREKLADGADVPIRRIAARMASDKKGYQSDQFIVDLSRLAREGPLEIDSRRLELLHTRDDEAGMLLHEVGSVAYVGFVRFEEVGA
SIO_010081: DESTI_RS28080
subclass of: SO_0000673
so part of: DESTI_RS28080
location: 10215..11054
location: region:10215-11054:1
so has part: feature:10215-11054:1:exon

WP_014813311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10215-11054:1:exon

DESTI_RS28085
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28085
old locus tag: Desti_5656
so part of: sequence
location: 11051..12343
location: region:11051-12343:1
so has part: feature:11051-12343:1:exon
subclass of: SO_0000010

position:11051:1
position: 11051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12343:1
position: 12343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11051-12343:1:exon

DESTI_RS28085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28085
old locus tag: Desti_5656
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006634664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2791 family P-loop domain-containing protein
translation: MNPKELAQHVITSLRKGMPPRWGYQLFTVGHEKLIKGFKKHHMSQIANQGLILFINGSNGSGKTHLFRLLTEIAMEGNCLVSNVQLHARETPFSKFEKVFSAIVRNIQTPSMYEDVASPEAEPFARVLDEALFLQVTGAKEAVNEITNEQYHTVYQALMEDRRIDFDFRKIVAKYWETYVPNRPISHPTVREEVRGEALQWFSGEGTQQTFRTRFDVNKMITGETARPMLQSLAGFVGLAGYRGLMILFDEAAQAYQFMQPTERVHAYNNLFQLVNEIEKLPGLFLVYAATPDFYTNTKYGIVINSGLATRIGKLRDNKAPRAMDPVWNLDAKTYIGLDDYKQAAANIREVYKQAYEDEEDDLESRLPSQEKIGAYVEDLAKQHGDTAIPRFWRVLMRSLIPYFEDCLEGEIRSAEEVYEDVMDLLSREE
SIO_010081: DESTI_RS28085
subclass of: SO_0000673
so part of: DESTI_RS28085
location: 11051..12343
location: region:11051-12343:1
so has part: feature:11051-12343:1:exon

WP_014813312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11051-12343:1:exon

DESTI_RS28090
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28090
old locus tag: Desti_5657
so part of: sequence
location: 12346..13539
location: region:12346-13539:1
so has part: feature:12346-13539:1:exon
subclass of: SO_0000010

position:12346:1
position: 12346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13539:1
position: 13539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12346-13539:1:exon

DESTI_RS28090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28090
old locus tag: Desti_5657
inference: COORDINATES: protein motif:HMM:NF022376.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2791 family P-loop domain-containing protein
translation: MDRNEALKVIYAFRNGIPPESRVSLFTVGRQTELEELTRLFDGEGGLLLQANSGSGKTHLFRFLREKALADGFAVGSITLDSSAEVKLNRMDQIVAAVFRDIQLPGMEERGIRAFFDTLCRQISDARYSRDPENFWTRLTNDWKWDSSDLLQSPALYIALRAWSCGGDSEKDLIEDWLSYPWNYYTNRKDLHRRLIADMKAHFKDPRPPSALLDVRAGTFNFQEPGYVQSWAALSDLRTLSKGAGFKDFILLFDEVEDIIYNLGNLKWQQIAFRNLLRFFSSDGIGVKSFFAVTPDFEQKCRELLVKREKWSEEFAPLESLPRFRISPLGAEELKELAGRIAEVHGTAYEWEDKVKEALPEIETIVDRLSASPEADRTRQTVKAIVEHLDQAYEDTE
SIO_010081: DESTI_RS28090
subclass of: SO_0000673
so part of: DESTI_RS28090
location: 12346..13539
location: region:12346-13539:1
so has part: feature:12346-13539:1:exon

WP_014813313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12346-13539:1:exon

DESTI_RS28095
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28095
old locus tag: Desti_5658
so part of: sequence
location: 13536..15641
location: region:13536-15641:1
so has part: feature:13536-15641:1:exon
subclass of: SO_0000010

position:13536:1
position: 13536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15641:1
position: 15641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13536-15641:1:exon

DESTI_RS28095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28095
old locus tag: Desti_5658
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MSARELLDQNVDNAFFGGFPSLRPVQEAAIKPIIEGKHVVACSGTGSGKTEAALTPLVSKYWNDFEKSNATVILYVAPTKALVNDLARRLEGPIKDKLDLRLGIRHGDRDDLKGRKKFPHVLITTPESLDVLLYRHDPALMSVRALVIDEVHLLYNTQRGVHLSVLIERLRRVVDPAPLQLVALSATIADLEAVGRFFFGQGADMEILNFPAHRTIDAQVRPADFGSVVEKLSTGRKCKLLAFANRRKDCEDQAEAVSEQKHLEGAVFVHYSSLAPETRIDIEERFQVLETALCNATSTLELGIDIGDIDAVLLCGVPSRADSFLQRIGRGNRRSNKTVAVCFVGMDRGAPAPVTEALRYLVLVDAARKGNLAQCETFELYGAVAQQCLSIIGSRQEYVSVKSLSETFEKLRYVDSATVERILSELARTDYLTSHEFMKQYGPGEGLHKLFKQRRIYGNFPIEAHMVEVRSGTEILGEVPHFSLENIELEDYVRFAANQWKVTNITEEGLELLPAEPPPGVETKTFQYAGKGRGFETFLNEAMWGMIHAKEFPDELLEPQMRERMKQAREDAQILCEFNQIPQCPGDPGILYYTFAGRLVNEAVALITQQENYRVGDHWLQVRSPIDWKSIPTDPADYEPVFESMFHPSMDQSIFQQMLPADLQVREYVQEWLKDEAVPRVLKRLAESEPVEIPLEDWPFG
SIO_010081: DESTI_RS28095
subclass of: SO_0000673
so part of: DESTI_RS28095
location: 13536..15641
location: region:13536-15641:1
so has part: feature:13536-15641:1:exon

WP_014813314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13536-15641:1:exon

DESTI_RS28100
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28100
old locus tag: Desti_5659
so part of: sequence
location: 15866..16357
location: region:15866-16357:1
so has part: feature:15866-16357:1:exon
subclass of: SO_0000010

position:15866:1
position: 15866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16357:1
position: 16357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16357:1:exon

DESTI_RS28100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28100
old locus tag: Desti_5659
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006425318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3124 domain-containing protein
translation: MRTSRRLIFVFGMLVMVGNCVGPGDCFAESFNLSDGQTVYVPVYSHIYVVRGHTFDLGICLSIRNTDPTHPITILSANYHDTEGNLVRGYVERPIELKPLASTDFFVSELDTAGGLGASFLVKWKSTSKVNEPIVEGVMAGTRSGQGISFVSRGKAIKDSSRK
SIO_010081: DESTI_RS28100
subclass of: SO_0000673
so part of: DESTI_RS28100
location: 15866..16357
location: region:15866-16357:1
so has part: feature:15866-16357:1:exon

WP_041287738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16357:1:exon

DESTI_RS28105
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28105
old locus tag: Desti_5660
so part of: sequence
location: complement(16405..18108)
location: region:16405-18108:-1
so has part: feature:16405-18108:-1:exon
subclass of: SO_0000010

position:16405:-1
position: 16405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18108:-1
position: 18108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16405-18108:-1:exon

DESTI_RS28105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28105
old locus tag: Desti_5660
inference: COORDINATES: protein motif:HMM:NF013188.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MEIIEILAIGLLAALVLGFVSHRLKLSPIVGYLLAGIIVGPHTPGFVADPNLAGQLAEVGVILLMFGVGLHFDLTDLLSVKGIAVPGAIVQSLIVTVLGTFVALAFGLSVGTGMVLGLALAVSSTVVMVRCLSDNRLLDTVHGHVAVGWLIVQDILTVLALVLLPMVTISFVGEEKGAVLTSLGIAVGKLVALGVLILPVVGKIVPWLLSHVARSRSRELFTLTILVLAFLIAAGSAMIFNASVALGAFLAGMVVGKTRVSHQAAADILPMRDAFAVLFFLSIGMLLDPGFLLMHPGLIAACFSMIVVVKTLVSCLLVLVLGYSVRTALTVAIGLAQIGEFSFLLSQQAQSLNLMPQEGFSVVVTCALISITLNPLLFKAVDPVENWLRGKKRLWGLLNYQAEMKARSANIQTQTNLLRHNKKPLAIVIGYGPVGQRVSTILRESEIQPIVVDLNVDTVSNLVSDGHPAIYGDGSHREILTTAGIERAKYLLITVPDLTSAIAIVTTALDLNPKIKTLVRSRFLYAKPILEGLGVSAISFEEEEVARAMTEALASEVSNSAEQEDEW
SIO_010081: DESTI_RS28105
subclass of: SO_0000673
so part of: DESTI_RS28105
location: complement(16405..18108)
location: region:16405-18108:-1
so has part: feature:16405-18108:-1:exon

WP_169316414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16405-18108:-1:exon

DESTI_RS28110
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
gene: secF
locus tag: DESTI_RS28110
old locus tag: Desti_5661
so part of: sequence
location: complement(18278..19186)
location: region:18278-19186:-1
so has part: feature:18278-19186:-1:exon
subclass of: SO_0000010

position:18278:-1
position: 18278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19186:-1
position: 19186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18278-19186:-1:exon

DESTI_RS28110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
gene: secF
locus tag: DESTI_RS28110
old locus tag: Desti_5661
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014812590.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecF
translation: MDLIKPNTSINFLGNRYYAYAFTTIMIILSLASIPIMGYMKLGIDFTGGTVVQVKLNKPAHTEQVREALKPLGENLAVQEFTGASGDEFVIRMEQSEESAEKLSQQVKNLLENKIGKGSAEIRGVEVVGPKVGTDLQESAIWATVIALILLLIYMAFRFTFTMGLAAVVCLLHDLCILYGFFAWTGKEFNLTILAAMLTVVGYDINDTIVVCDRIRDNLKVMKKAPLIKVFNAAINQTLSRTLLTSVGTLLAVAAFLVFETNVLKDFAWALLVGIVFGTYSSIFVASPLVLELDRILPVRRG
SIO_010081: DESTI_RS28110
subclass of: SO_0000673
so part of: DESTI_RS28110
location: complement(18278..19186)
location: region:18278-19186:-1
so has part: feature:18278-19186:-1:exon

WP_014813317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18278-19186:-1:exon

DESTI_RS28115
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
gene: secD
locus tag: DESTI_RS28115
old locus tag: Desti_5662
so part of: sequence
location: complement(19262..20866)
location: region:19262-20866:-1
so has part: feature:19262-20866:-1:exon
subclass of: SO_0000010

position:19262:-1
position: 19262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20866:-1
position: 20866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19262-20866:-1:exon

DESTI_RS28115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
gene: secD
locus tag: DESTI_RS28115
old locus tag: Desti_5662
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014812591.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecD
translation: MTHNLRWRIILIGVVLAVSAFLVYPSVGPVPSFWAKYLPNNPVRLGLDLQGGLYLVLEVQADMAVEAVVDQGISEASAVMKEERIRYNDIQRTSPTSLTVYLKDADQAGLFDEKVLDKLQNYKKASTSQTDKGFEVRLQMDQKTAETIKQRAVKQAVDTIRNRVDAFGVAEPDVVMQGVDRIVVQLPGLKEDINRAIDIIKKTARLEFKLVDEKGDLNAALKGEIPTGDEILYQVERSAGTGASSRKPLLIKKQILMTGDSITDAKVQPGQAGGMIVHMDFNRTGAVQFERITGEHVGERLAIILDNRVYSAPVIKDRISGGSAIIEGTFNPEEASDLALVLRAGSLPAPVKILENRTVGPSLGEDSIRLGRNAILLSLFLISICMAFYYKWSGVVADVALSLNLLLIMAVMVSPGLRATLTLPGLAGIALTIGMAIDANVLIFERVKEELRGGKSAKAALDNGYDMAFKTILDTHVTNILTALPLIQFGTGPIKGFAVTLCIGLLISLFTAYFITRTIFDYAFQVKRIKSLSI
SIO_010081: DESTI_RS28115
subclass of: SO_0000673
so part of: DESTI_RS28115
location: complement(19262..20866)
location: region:19262-20866:-1
so has part: feature:19262-20866:-1:exon

WP_014813318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19262-20866:-1:exon

DESTI_RS28120
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28120
so part of: sequence
location: 21075..21278
location: region:21075-21278:1
so has part: feature:21075-21278:1:exon
subclass of: SO_0000010

position:21075:1
position: 21075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21278:1
position: 21278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21075-21278:1:exon

DESTI_RS28120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKDAWRYDSRLLLASLKRRIERICLGRLKSAGQWFGLCCGENYLEDQTLDENGLDAQALERSHTNG
SIO_010081: DESTI_RS28120
subclass of: SO_0000673
so part of: DESTI_RS28120
location: 21075..21278
location: region:21075-21278:1
so has part: feature:21075-21278:1:exon

WP_041287739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21075-21278:1:exon

DESTI_RS28125
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28125
old locus tag: Desti_5663
so part of: sequence
location: complement(21841..22812)
location: region:21841-22812:-1
so has part: feature:21841-22812:-1:exon
subclass of: SO_0000010

position:21841:-1
position: 21841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22812:-1
position: 22812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21841-22812:-1:exon

DESTI_RS28125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28125
old locus tag: Desti_5663
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MPLSNPPATLRQFDLSEPSVSISTKELLDAFLSGKSPKTIEAYRRDLEDFRAFTQSDNLPQTILLFIAQGLHQANHLALRYKTHLAEERKLQPTTVNRKLAALRSLSDMAYTLGMINWKVRVKNQKVSSASRDTRGPGNSAVQGLKEEIAKRSDPKGVRDRALFHLLYDLALRRAEVVFLDLADVDLSAGTLRVLGKGRLQKEVLTMPTTTRKILANWIAMRGSEPGPLFVNLHHDPGIRGKRLSPTSLYRIIRELGERTGQKVRPHGLRHTSISEAVRKAQAVGLDVTKVLQFSRHKDLKTLQVYIDQVENAQGKIAELVAG
SIO_010081: DESTI_RS28125
subclass of: SO_0000673
so part of: DESTI_RS28125
location: complement(21841..22812)
location: region:21841-22812:-1
so has part: feature:21841-22812:-1:exon

WP_014813319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21841-22812:-1:exon

DESTI_RS28130
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28130
old locus tag: Desti_5664
so part of: sequence
location: complement(22819..23577)
location: region:22819-23577:-1
so has part: feature:22819-23577:-1:exon
subclass of: SO_0000010

position:22819:-1
position: 22819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23577:-1
position: 23577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22819-23577:-1:exon

DESTI_RS28130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28130
old locus tag: Desti_5664
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKKDFLERMLELVSEKGKKWSEIASTLEEEGYTESGNPLGPNTIRKRYGRWEEKQGRPDKASIKQETLDDEIRRAGPKRALVSPEEQPEKSGMLSAKEMFELLRESMERRDTMLSAQLQKASDKEYDPEAERQLESRLISRLETKIEETVAARICAAREQIREELEKALSSSVAAGLENHLASLLEGVEVKERSAGPGRGHKGSRMTKISATIPSEIYYEMKRLGGIFSSHLVAACELYLRARGKYPTDKD
SIO_010081: DESTI_RS28130
subclass of: SO_0000673
so part of: DESTI_RS28130
location: complement(22819..23577)
location: region:22819-23577:-1
so has part: feature:22819-23577:-1:exon

WP_014813320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22819-23577:-1:exon

DESTI_RS28135
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28135
old locus tag: Desti_5666
so part of: sequence
location: 23910..24956
location: region:23910-24956:1
so has part: feature:23910-24956:1:exon
subclass of: SO_0000010

position:23910:1
position: 23910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24956:1
position: 24956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23910-24956:1:exon

DESTI_RS28135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28135
old locus tag: Desti_5666
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014811245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDSEHNAIDRDELVKVWHDYGLRFSVFVPAHQPRPDTWEPDVRQFDEKGRVNPHYLKHWKFLARTKGFLRDRYAEHGILKGPTLFFDCLVRQFQNPMRYAKVEGEYGPDFFEVKDTQDWYEKAIRMGIWDWQIGFSCRSVLCQRRWCSMHRGNPKRINPVDVYGLLTVFERIPAASAKAQVGKWFGMKLGDLKGAGVRTPTVYRRKVSKKALSVLLKEYENMRTHQVKELIGRLHGLIKGSPFEEWHGRKFDDDYAFLSDKAADNLYRINSPAAKAYVWLLIRQEELARNTRGAKLSVSDSELATAIGVSKPSAQTYRKALTKLGLIETGETKAGKTAEIRIVKVKY
SIO_010081: DESTI_RS28135
subclass of: SO_0000673
so part of: DESTI_RS28135
location: 23910..24956
location: region:23910-24956:1
so has part: feature:23910-24956:1:exon

WP_014813322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23910-24956:1:exon

DESTI_RS28140
type: Gene
subclass of: SO_0000704
RO_0002162: 706587
locus tag: DESTI_RS28140
old locus tag: Desti_5667
so part of: sequence
location: 25204..26913
location: region:25204-26913:1
so has part: feature:25204-26913:1:exon
subclass of: SO_0000010

position:25204:1
position: 25204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26913:1
position: 26913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25204-26913:1:exon

DESTI_RS28140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 706587
locus tag: DESTI_RS28140
old locus tag: Desti_5667
inference: COORDINATES: protein motif:HMM:NF012688.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase
translation: MNLIRSPEYLIPTLNSQSTVALTAPLIIRDTVLIGFALSPEESRCVELALNEFIALCPLLYRRVTTPRAFHGLKRIWEFLDERGLLPEEKIDNQLNINHIEDTRLMAFLLDPESSREVDYGDYQVQEALTLADLAQRYLDHDYPYRITDICDKASWELAGEMLAHDAGLIFQLAERLPGLMSRDLRKLYRDIELPLMLVLDDMRRVGIGFAGLKCAELAMETERSLALLAQEITGGQSVNLTSHEDVYGFLVNQGVPLQLAPAYVRRKGIKKPLEQIAHAYPLVRRILAWWDTGRDLGFLRRWAGHTRIHPLWGQTRSATSRVYARFPAVQNISRELRKLFVPAPGNVSVKADYSQAQLRILAHLSADPELVRVYNDPNGDVHTETSDWLGLGDRSVAKEINFAICFGMGATALCKKINELKEGKGRSDFIDLDTAQSYIDGFYGRFPEVREFFDREWENIKKLPGQQRLVRSLIGRERRFPRRPTSEMERQFRVTWTQQIEADLMKTAMVRLDRIFRRRNMKARIVMMIHDALWVEAPHDEENEVRHLVERMMTTAAKLTVPLEVDIE
SIO_010081: DESTI_RS28140
subclass of: SO_0000673
so part of: DESTI_RS28140
location: 25204..26913
location: region:25204-26913:1
so has part: feature:25204-26913:1:exon

WP_014813323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25204-26913:1:exon