Mageeibacillus indolicus UPII9-5, complete sequence.
Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Mageeibacillus.
Submitted (20-SEP-2010) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA
Submitted (30-DEC-2009) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001850.2.\n\nOn Oct 13, 2010 this sequence version replaced NC_013895.1.\nClostridiales genomosp. BVAB3 str. UPII9-5 was isolated from the\nhuman urogenital tract, associated with bacterial vaginosis.\n\nThis is a reference genome for the Human Microbiome Project. This\nproject is co-owned with the Human Microbiome Project DACC. Source\nDNA provided by Sharon Hillier, Magee-Womens Research Institute,\n204 Craft Avenue, Pittsburgh, PA 15213, USA\n(shillier@mail.magee.edu). Funded by National Institute of Allergy\nand Infectious Diseases on behalf of the NIH Roadmap Human\nMicrobiome Project (U54-AI-084844-01).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Celera Assembler v. 5.3\nGenome Coverage :: 36x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 12:05:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,546\nCDSs (total) :: 1,492\nGenes (coding) :: 1,460\nCDSs (with protein) :: 1,460\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 10 of 32\nPseudo Genes (incomplete) :: 22 of 32\nPseudo Genes (internal stop) :: 3 of 32\nPseudo Genes (multiple problems) :: 3 of 32\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253403.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619019.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_007063400.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_012634462.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF025625.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_019214808.1
COORDINATES: similar to AA sequence:RefSeq:WP_015516036.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015568442.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_007706629.1
COORDINATES: similar to AA sequence:RefSeq:WP_002601914.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_006857124.1
COORDINATES: similar to AA sequence:RefSeq:WP_012739856.1
COORDINATES: similar to AA sequence:RefSeq:WP_001820892.1
COORDINATES: similar to AA sequence:RefSeq:WP_019189366.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: similar to AA sequence:RefSeq:WP_009538159.1
CD1871A family CXXC motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009214210.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364351.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF017464.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012992673.1
COORDINATES: similar to AA sequence:RefSeq:WP_012992671.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624837.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_016438852.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161111.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00358.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
VacB/RNase II family 3'-5' exoribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_004629640.1
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_017750713.1
COORDINATES: protein motif:HMM:NF015607.2
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:NF013706.2
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012992694.1
IS200/IS605 family element RNA-guided endonuclease TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_005539182.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014313144.1
COORDINATES: protein motif:HMM:NF013100.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013270763.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147698.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016147699.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011231381.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_017751856.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009002306.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012451693.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002602058.1
GO:0050043 - lactate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003251.0
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012389.2
COORDINATES: similar to AA sequence:RefSeq:WP_016147634.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617048.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016147637.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002853040.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063003.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003408337.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012450620.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982670.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_003424828.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012992728.1
COORDINATES: similar to AA sequence:RefSeq:WP_012992727.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_009533129.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: similar to AA sequence:RefSeq:WP_012993091.1
COORDINATES: similar to AA sequence:RefSeq:WP_009533434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007860160.1
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_009644556.1
COORDINATES: similar to AA sequence:RefSeq:WP_009644492.1
COORDINATES: protein motif:HMM:NF023266.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_015521949.1
GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_009266915.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012436.2
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_012994117.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005364792.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004134743.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: protein motif:HMM:NF012695.2
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008420304.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:TIGR03943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314217.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:NF012744.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO:0043163 - cell envelope organization [Evidence IEA]
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009242817.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF024817.2
COORDINATES: protein motif:HMM:TIGR02104.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009664225.1
COORDINATES: similar to AA sequence:RefSeq:WP_006876304.1
COORDINATES: similar to AA sequence:RefSeq:WP_016289662.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_005339370.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF016064.2
COORDINATES: similar to AA sequence:RefSeq:WP_011010003.1
COORDINATES: similar to AA sequence:RefSeq:WP_011590335.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_009216270.1
COORDINATES: similar to AA sequence:RefSeq:WP_008751481.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541009.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF013954.2
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004221041.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013425.2
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF037653.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003413786.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253461.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015100.2
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:TIGR01947.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_015513963.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015513964.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_015513965.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_015557640.1
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: similar to AA sequence:RefSeq:WP_003514618.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013824063.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514623.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514625.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518557.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010073738.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004620865.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011100713.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320998.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360263.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347536.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004626679.1
COORDINATES: similar to AA sequence:RefSeq:WP_013484345.1
COORDINATES: similar to AA sequence:RefSeq:WP_013280009.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514651.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148778.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011721226.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620838.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013724467.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514662.1
COORDINATES: protein motif:HMM:NF001381.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003421130.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014256820.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312132.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006873259.1
COORDINATES: similar to AA sequence:RefSeq:WP_013484362.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015924328.1
COORDINATES: protein motif:HMM:NF010167.0
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_018084580.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003373061.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018596898.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629144.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006599682.1
COORDINATES: similar to AA sequence:RefSeq:WP_006598113.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009062061.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF024258.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024904.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980890.1
COORDINATES: protein motif:HMM:TIGR03263.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00690.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_015925254.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359673.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005943586.1
COORDINATES: similar to AA sequence:RefSeq:WP_006565480.1
COORDINATES: similar to AA sequence:RefSeq:WP_007494263.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_015528320.1
COORDINATES: similar to AA sequence:RefSeq:WP_007890201.1
COORDINATES: similar to AA sequence:RefSeq:WP_012816061.1
COORDINATES: similar to AA sequence:RefSeq:WP_008707779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012742322.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003364801.1
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014080862.1
COORDINATES: protein motif:HMM:NF017347.2
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_019189740.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183240.1
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01383.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF014510.2
COORDINATES: similar to AA sequence:RefSeq:WP_015617422.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_020815878.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015392175.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: protein motif:HMM:NF019099.2
COORDINATES: protein motif:HMM:NF021126.2
COORDINATES: similar to AA sequence:RefSeq:WP_015523777.1
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012799.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: similar to AA sequence:RefSeq:WP_011590128.1
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: similar to AA sequence:RefSeq:WP_008516574.1
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF014092.2
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010681231.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681232.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257892.1
COORDINATES: protein motif:HMM:TIGR04226.1
GO:0018262 - isopeptide cross-linking [Evidence IEA]
isopeptide-forming domain-containing fimbrial protein
COORDINATES: protein motif:HMM:NF020044.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005427774.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002603544.1
COORDINATES: similar to AA sequence:RefSeq:WP_007492351.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003511583.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_005425144.1
COORDINATES: similar to AA sequence:RefSeq:WP_014521112.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: protein motif:HMM:NF014198.2
COORDINATES: similar to AA sequence:RefSeq:WP_015558436.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016398247.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214631.1
COORDINATES: similar to AA sequence:RefSeq:WP_000368966.1
MptD family putative ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_009447425.1
COORDINATES: similar to AA sequence:RefSeq:WP_002843712.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620934.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_015357814.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681267.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359923.1
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: protein motif:HMM:TIGR00536.1
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009168126.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006872999.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007719752.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_004037666.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012634529.1
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_013381315.1
COORDINATES: protein motif:HMM:NF013231.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019214467.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293009.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_002843632.1
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006873638.1
COORDINATES: similar to AA sequence:RefSeq:WP_002845977.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_006714946.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003512565.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020072106.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF014713.2
cytochrome c biogenesis CcdA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012282913.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014073.2
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_003516096.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005609868.1
COORDINATES: similar to AA sequence:RefSeq:WP_015558179.1
COORDINATES: protein motif:HMM:NF015039.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517075.1
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:TIGR00691.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009262294.1
COORDINATES: similar to AA sequence:RefSeq:WP_004605741.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012198208.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118873.1
COORDINATES: protein motif:HMM:TIGR00649.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035932.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015358241.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004617529.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491542.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017452.2
COORDINATES: similar to AA sequence:RefSeq:WP_004612495.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009256030.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926072.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518898.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358791.1
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_014256198.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925561.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: similar to AA sequence:RefSeq:WP_020813735.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738653.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_005211632.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514324.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004038639.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_012064205.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF012509.2
putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003420485.1
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002582822.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: protein motif:HMM:NF041568.1
GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:TIGR00450.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_003359377.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_020815628.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF023802.2
COORDINATES: similar to AA sequence:RefSeq:WP_010681342.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513423.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_015390327.1
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515022.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_004619833.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980215.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009001663.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020814236.1
COORDINATES: protein motif:HMM:NF020349.2
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
sporulation initiation factor Spo0A C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003512117.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:TIGR00647.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024934.2
COORDINATES: similar to AA sequence:RefSeq:WP_015357743.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF009920.0
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_003514304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312030.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355309.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020457902.1
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015512668.1
COORDINATES: similar to AA sequence:RefSeq:WP_020814311.1
COORDINATES: protein motif:HMM:NF011080.0
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517139.1
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:NF033218.1
alkaline shock response membrane anchor protein AmaP
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011640006.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF003933.0
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00634.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF006393.0
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF023583.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: similar to AA sequence:RefSeq:WP_009529171.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009529172.1
COORDINATES: similar to AA sequence:RefSeq:WP_004104990.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006627214.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007392087.1
COORDINATES: similar to AA sequence:RefSeq:WP_009643545.1
COORDINATES: similar to AA sequence:RefSeq:WP_006148869.1
COORDINATES: similar to AA sequence:RefSeq:WP_001234286.1
COORDINATES: similar to AA sequence:RefSeq:WP_000813487.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000879507.1
COORDINATES: similar to AA sequence:RefSeq:WP_000398284.1
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002570387.1
COORDINATES: similar to AA sequence:RefSeq:WP_000342537.1
COORDINATES: similar to AA sequence:RefSeq:WP_002345009.1
COORDINATES: similar to AA sequence:RefSeq:WP_000331151.1
COORDINATES: similar to AA sequence:RefSeq:WP_017646277.1
COORDINATES: similar to AA sequence:RefSeq:WP_018368130.1
bifunctional lysozyme/C40 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_002989471.1
COORDINATES: similar to AA sequence:RefSeq:WP_001814923.1
tetracycline resistance determinant leader peptide
COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1
tetracycline resistance ribosomal protection protein Tet(M)
COORDINATES: similar to AA sequence:RefSeq:WP_002319681.1
cysteine-rich KTR domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001227347.1
COORDINATES: similar to AA sequence:RefSeq:WP_006733729.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_002411750.1
COORDINATES: similar to AA sequence:RefSeq:WP_001845478.1
COORDINATES: similar to AA sequence:RefSeq:WP_006730246.1
COORDINATES: similar to AA sequence:RefSeq:WP_020220015.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001820672.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000013383.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_019189656.1
COORDINATES: similar to AA sequence:RefSeq:WP_015524535.1
COORDINATES: similar to AA sequence:RefSeq:WP_008727027.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993133.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993134.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214794.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214795.1
COORDINATES: protein motif:HMM:NF013490.2
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009537685.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001051310.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018579898.1
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_013272324.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214204.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_005343538.1
COORDINATES: similar to AA sequence:RefSeq:WP_003438088.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590618.1
COORDINATES: protein motif:HMM:NF016205.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361793.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243544.1
COORDINATES: protein motif:HMM:NF024483.2
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016293907.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_015924260.1
COORDINATES: protein motif:HMM:TIGR03596.1
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF000594.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: similar to AA sequence:RefSeq:WP_006571125.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516530.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_003451075.1
COORDINATES: protein motif:HMM:NF012863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF004079.0
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_012993164.1
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_013362497.1
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_018598374.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_008909446.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004077916.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535737.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535736.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_009219229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009219230.1
COORDINATES: similar to AA sequence:RefSeq:WP_006874237.1
COORDINATES: similar to AA sequence:RefSeq:WP_006442925.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065142.1
COORDINATES: similar to AA sequence:RefSeq:WP_009219234.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009219235.1
COORDINATES: similar to AA sequence:RefSeq:WP_005941980.1
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008400489.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF020450.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_015557555.1
COORDINATES: protein motif:HMM:NF024301.2
COORDINATES: similar to AA sequence:RefSeq:WP_005333135.1
COORDINATES: similar to AA sequence:RefSeq:WP_006861576.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006443373.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: similar to AA sequence:RefSeq:WP_013280554.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006778933.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347489.1
COORDINATES: similar to AA sequence:RefSeq:WP_006428762.1
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015526357.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359565.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015522710.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009248713.1
putative hydroxymethylpyrimidine transporter CytX
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:TIGR03057.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014254585.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:NF039199.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312861.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_002844015.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591812.1
nucleobase:cation symporter-2 family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008706293.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586050.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706296.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706297.1
COORDINATES: similar to AA sequence:RefSeq:WP_019160478.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008706305.1
COORDINATES: similar to AA sequence:RefSeq:WP_015525380.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009326084.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012993242.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012993243.1
COORDINATES: protein motif:HMM:NF017548.2
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_012993247.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993246.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009259673.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011967681.1
COORDINATES: similar to AA sequence:RefSeq:WP_003038755.1
COORDINATES: similar to AA sequence:RefSeq:WP_006270454.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004603126.1
COORDINATES: protein motif:HMM:NF022521.2
COORDINATES: similar to AA sequence:RefSeq:WP_004604696.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_004845418.1
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013381858.1
COORDINATES: similar to AA sequence:RefSeq:WP_006570603.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515347.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014254343.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014255041.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000907.0
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: protein motif:HMM:NF013696.2
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
Sapep family Mn(2+)-dependent dipeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_010074167.1
COORDINATES: similar to AA sequence:RefSeq:WP_009259878.1
COORDINATES: similar to AA sequence:RefSeq:WP_012341969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013724290.1
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: similar to AA sequence:RefSeq:WP_009537819.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790849.1
COORDINATES: similar to AA sequence:RefSeq:WP_013279756.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF015672.2
COORDINATES: protein motif:HMM:NF012424.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007591079.1
RNA-binding S4 domain-containing protein
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003514291.1
COORDINATES: similar to AA sequence:RefSeq:WP_004443240.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020813755.1
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:NF041131.1
COORDINATES: similar to AA sequence:RefSeq:WP_006782731.1
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003497743.1
COORDINATES: similar to AA sequence:RefSeq:WP_005427589.1
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_007488961.1
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: protein motif:HMM:TIGR00194.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF018637.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
arsenic metallochaperone ArsD family protein
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_009216164.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_015526294.1
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012451499.1
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: similar to AA sequence:RefSeq:WP_014261860.1
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: protein motif:HMM:TIGR01249.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007493288.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360121.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004621755.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01668.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_013624976.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF003215.0
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_014313255.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014254672.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003541631.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358263.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: similar to AA sequence:RefSeq:WP_006001624.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018085462.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009533513.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019202.2
COORDINATES: protein motif:HMM:NF039179.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_007789146.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006780291.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413465.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515563.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020816274.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017750618.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657420.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:TIGR00054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678407.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF001688.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063907.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: similar to AA sequence:RefSeq:WP_006774069.1
COORDINATES: similar to AA sequence:RefSeq:WP_006570754.1
COORDINATES: protein motif:HMM:NF021075.2
COORDINATES: similar to AA sequence:RefSeq:WP_014183422.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_016146812.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF014707.2
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003512585.1
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: protein motif:HMM:TIGR00665.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004619088.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004626741.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012993404.1
COORDINATES: similar to AA sequence:RefSeq:WP_013270858.1
COORDINATES: protein motif:HMM:TIGR03598.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_009202895.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02493.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: protein motif:HMM:NF004088.0
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003412169.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118085.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003358892.1
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009248534.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_013120770.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014314022.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616519.1
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: similar to AA sequence:RefSeq:WP_015925173.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012101825.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964787.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019190069.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159136.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03974.1
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_005352344.1
COORDINATES: protein motif:HMM:TIGR00739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014313163.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004621756.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_018084361.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_008413475.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013260.2
COORDINATES: similar to AA sequence:RefSeq:WP_020815073.1
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004621286.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359125.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_003512592.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513669.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064035.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF025104.2
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF039834.1
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011989033.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003514587.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: similar to AA sequence:RefSeq:WP_020072193.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_015358788.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012407.2
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: similar to AA sequence:RefSeq:WP_008976928.1
COORDINATES: protein motif:HMM:TIGR03064.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0045184 - establishment of protein localization [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359695.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005934841.1
COORDINATES: similar to AA sequence:RefSeq:WP_015520061.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013239.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009257881.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488313.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257880.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007488315.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488316.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488317.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_003518901.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00426.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014256129.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF014072.2
COORDINATES: similar to AA sequence:RefSeq:WP_012033771.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: similar to AA sequence:RefSeq:WP_012993501.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374662.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358620.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005951070.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
RsmF rRNA methyltransferase first C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016207115.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001898.0
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_003527879.1
COORDINATES: protein motif:HMM:NF008967.0
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009203392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738820.1
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014313684.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009064751.1
COORDINATES: protein motif:HMM:NF013212.2
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_005946661.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_015516565.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039826.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925581.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015523166.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF003678.0
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
phosphatidylserine decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004618764.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014471.2
COORDINATES: similar to AA sequence:RefSeq:WP_019160871.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190226.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064082.1
2-hydroxycarboxylate transporter family protein
COORDINATES: protein motif:HMM:NF013740.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003514124.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF012843.2
GO:0004525 - ribonuclease III activity [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015357986.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518486.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013379189.1
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013977659.1
COORDINATES: protein motif:HMM:NF006395.0
sulfur carrier protein ThiS adenylyltransferase ThiF
COORDINATES: similar to AA sequence:RefSeq:WP_008399776.1
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF014588.2
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013119533.1
COORDINATES: similar to AA sequence:RefSeq:WP_012742463.1
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703718.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517040.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586791.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515871.1
COORDINATES: protein motif:HMM:NF013308.2
COORDINATES: protein motif:HMM:NF013703.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116554.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366079.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021903.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: protein motif:HMM:NF028292.2
COORDINATES: protein motif:HMM:NF039422.1
COORDINATES: similar to AA sequence:RefSeq:WP_020457874.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512867.1
COORDINATES: similar to AA sequence:RefSeq:WP_003542221.1
COORDINATES: similar to AA sequence:RefSeq:WP_007777845.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004626230.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_011721260.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358234.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063710.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200563.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_003512200.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790665.1
COORDINATES: protein motif:HMM:TIGR03994.1
COORDINATES: protein motif:HMM:NF016363.2
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006774746.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531609.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_019160693.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611166.1
COORDINATES: protein motif:HMM:NF024116.2
LPXTG-motif cell wall anchor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009080619.1
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035103.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009256854.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009324348.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491733.1
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_013382519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007881955.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056286.1
COORDINATES: similar to AA sequence:RefSeq:WP_004220517.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008974788.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014262997.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527598.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009262501.1
COORDINATES: similar to AA sequence:RefSeq:WP_005539842.1
COORDINATES: similar to AA sequence:RefSeq:WP_009262502.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517328.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005921560.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_004616301.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_020073193.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
COORDINATES: similar to AA sequence:RefSeq:WP_006571323.1
COORDINATES: similar to AA sequence:RefSeq:WP_008369363.1
COORDINATES: similar to AA sequence:RefSeq:WP_008974911.1
COORDINATES: similar to AA sequence:RefSeq:WP_013495368.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013272618.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006857631.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF015013.2
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: similar to AA sequence:RefSeq:WP_006875313.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_008413411.1
COORDINATES: similar to AA sequence:RefSeq:WP_011197039.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015528269.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003500252.1
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517493.1
COORDINATES: protein motif:HMM:TIGR00631.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00556.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358384.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF010569.0
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014724.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013279.2
GO:0051301 - cell division [Evidence IEA]
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF007033.0
COORDINATES: similar to AA sequence:RefSeq:WP_016323887.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573581.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971692.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022812.2
COORDINATES: similar to AA sequence:RefSeq:WP_013273619.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014355959.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009663490.1
electron transfer flavoprotein subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012101011.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005539176.1
2-hydroxyacyl-CoA dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014116970.1
COORDINATES: similar to AA sequence:RefSeq:WP_009644246.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012993708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273625.1
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003357421.1
COORDINATES: similar to AA sequence:RefSeq:WP_008720087.1
COORDINATES: similar to AA sequence:RefSeq:WP_005424096.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004613698.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_009461405.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01893.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019678047.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190589.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190591.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190592.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190593.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190594.1
COORDINATES: protein motif:HMM:TIGR01076.1
COORDINATES: similar to AA sequence:RefSeq:WP_005838384.1
COORDINATES: protein motif:HMM:NF021219.2
COORDINATES: similar to AA sequence:RefSeq:WP_003366352.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_005365981.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524870.1
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_004628945.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589924.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004846467.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008707305.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200674.1
COORDINATES: similar to AA sequence:RefSeq:WP_007489140.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF006732.0
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012994150.1
COORDINATES: protein motif:HMM:NF025919.2
COORDINATES: similar to AA sequence:RefSeq:WP_002596446.1
COORDINATES: similar to AA sequence:RefSeq:WP_002606602.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: similar to AA sequence:RefSeq:WP_006001672.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364223.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994111.1
COORDINATES: protein motif:HMM:NF025792.2
COORDINATES: similar to AA sequence:RefSeq:WP_007488859.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981833.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488862.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016279113.1
COORDINATES: similar to AA sequence:RefSeq:WP_009220195.1
COORDINATES: similar to AA sequence:RefSeq:WP_006905792.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488871.1
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009663476.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_006875288.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_011196981.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099127.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF026171.2
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_020073716.1
GO:0002953 - 5'-deoxynucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_009242838.1
COORDINATES: similar to AA sequence:RefSeq:WP_007047393.1
COORDINATES: similar to AA sequence:RefSeq:WP_006728951.1
COORDINATES: similar to AA sequence:RefSeq:WP_009644016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009662615.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014018033.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF025017.2
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_016147084.1
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013119158.1
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515852.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:TIGR01525.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040326.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014255614.1
U32 family peptidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908419.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016146326.1
COORDINATES: similar to AA sequence:RefSeq:WP_004622625.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_019190683.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993834.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_004619907.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012739127.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059231.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005805855.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
folate family ECF transporter S component
COORDINATES: protein motif:HMM:NF019585.2
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: similar to AA sequence:RefSeq:WP_003437587.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_015515423.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF024248.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009266597.1
COORDINATES: similar to AA sequence:RefSeq:WP_005999201.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005999200.1
COORDINATES: similar to AA sequence:RefSeq:WP_009060348.1
UDP-N-acetylglucosamine pyrophosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_005356508.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926241.1
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007706308.1
COORDINATES: similar to AA sequence:RefSeq:WP_007706305.1
COORDINATES: similar to AA sequence:RefSeq:WP_007706302.1
COORDINATES: similar to AA sequence:RefSeq:WP_002572023.1
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512912.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007719464.1
COORDINATES: protein motif:HMM:TIGR00519.1
GO:0004067 - asparaginase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003409645.1
COORDINATES: protein motif:HMM:NF005088.0
COORDINATES: similar to AA sequence:RefSeq:WP_010963823.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_015533681.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993884.1
COORDINATES: similar to AA sequence:RefSeq:WP_003509354.1
COORDINATES: similar to AA sequence:RefSeq:WP_017751122.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019213617.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007488622.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358758.1
COORDINATES: protein motif:HMM:NF011442.0
putative manganese-dependent inorganic diphosphatase
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_002571963.1
COORDINATES: protein motif:HMM:NF012970.2
serine-type D-Ala-D-Ala carboxypeptidase
COORDINATES: protein motif:HMM:NF025037.2
COORDINATES: protein motif:HMM:TIGR02185.1
COORDINATES: similar to AA sequence:RefSeq:WP_009259806.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597387.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147444.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597385.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597384.1
COORDINATES: similar to AA sequence:RefSeq:WP_016323673.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_019213828.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_011196160.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01979.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01994.1
GO:0005198 - structural molecule activity [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01980.1
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: similar to AA sequence:RefSeq:WP_003490141.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531342.1
COORDINATES: similar to AA sequence:RefSeq:WP_007859017.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019189936.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004451060.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525694.1
fused N-dimethylarginine dimethylaminohydrolase/saccharopine dehydrogenase domain-containing protein
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: protein motif:HMM:NF002528.0
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008411979.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004602593.1
COORDINATES: similar to AA sequence:RefSeq:WP_015540874.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925507.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00065.1
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015359823.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_009664067.1
COORDINATES: protein motif:HMM:NF021348.2
COORDINATES: similar to AA sequence:RefSeq:WP_012198574.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01891.1
COORDINATES: protein motif:HMM:NF014116.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
carbohydrate binding domain-containing protein
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF039504.1
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: similar to AA sequence:RefSeq:WP_015566487.1
COORDINATES: similar to AA sequence:RefSeq:WP_010167833.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:NF014026.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002594142.1
COORDINATES: protein motif:HMM:NF018305.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274818.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535576.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274816.1
COORDINATES: protein motif:HMM:NF012162.2
thioester-forming surface-anchored protein
COORDINATES: similar to AA sequence:RefSeq:WP_005612153.1
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: similar to AA sequence:RefSeq:WP_012200164.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320380.1
COORDINATES: similar to AA sequence:RefSeq:WP_009215304.1
COORDINATES: protein motif:HMM:NF014080.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361816.1
COORDINATES: similar to AA sequence:RefSeq:WP_009266986.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019678379.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009218818.1
COORDINATES: similar to AA sequence:RefSeq:WP_008751459.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160214.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_006570645.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_006876641.1
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: similar to AA sequence:RefSeq:WP_003461039.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012344652.1
TetR-like C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019189396.1
COORDINATES: similar to AA sequence:RefSeq:WP_008977276.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019214833.1
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: protein motif:HMM:NF013915.2
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF012879.2
COORDINATES: protein motif:HMM:TIGR00083.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012634901.1
COORDINATES: protein motif:HMM:NF013417.2
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: similar to AA sequence:RefSeq:WP_013625563.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517368.1
COORDINATES: protein motif:HMM:NF025745.2
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_009066059.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066022.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066002.1
COORDINATES: protein motif:HMM:NF021587.2
COORDINATES: protein motif:HMM:NF022101.2
COORDINATES: protein motif:HMM:NF015213.2
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009532734.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006599319.1
COORDINATES: similar to AA sequence:RefSeq:WP_003423620.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: similar to AA sequence:RefSeq:WP_008755060.1
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF022743.2
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004619838.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_003460611.1
DNA-directed RNA polymerase subunit beta
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_005942920.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_007884766.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199903.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_004082173.1
COORDINATES: similar to AA sequence:RefSeq:WP_015561474.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994104.1
COORDINATES: similar to AA sequence:RefSeq:WP_016805738.1
COORDINATES: similar to AA sequence:RefSeq:WP_009994320.1
COORDINATES: similar to AA sequence:RefSeq:WP_019261837.1
COORDINATES: similar to AA sequence:RefSeq:WP_009429499.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994112.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994113.1
COORDINATES: similar to AA sequence:RefSeq:WP_012992759.1
COORDINATES: similar to AA sequence:RefSeq:WP_009663880.1
COORDINATES: similar to AA sequence:RefSeq:WP_019261399.1
COORDINATES: similar to AA sequence:RefSeq:WP_004128514.1
COORDINATES: similar to AA sequence:RefSeq:WP_004111744.1
COORDINATES: similar to AA sequence:RefSeq:WP_019213881.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535065.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837021.1
COORDINATES: similar to AA sequence:RefSeq:WP_019189329.1
COORDINATES: similar to AA sequence:RefSeq:WP_019189328.1
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004120547.1
COORDINATES: similar to AA sequence:RefSeq:WP_004136319.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: similar to AA sequence:RefSeq:WP_008755092.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634151.1
COORDINATES: similar to AA sequence:RefSeq:WP_019213739.1
COORDINATES: similar to AA sequence:RefSeq:WP_009428128.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034765.1
COORDINATES: similar to AA sequence:RefSeq:WP_000488165.1
COORDINATES: similar to AA sequence:RefSeq:WP_001114254.1
COORDINATES: similar to AA sequence:RefSeq:WP_007392010.1
COORDINATES: similar to AA sequence:RefSeq:WP_000792450.1
COORDINATES: similar to AA sequence:RefSeq:WP_006733062.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994158.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512622.1
COORDINATES: protein motif:HMM:NF021388.2
COORDINATES: similar to AA sequence:RefSeq:WP_009429361.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819974.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005398208.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222554.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993757.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_019214271.1
COORDINATES: similar to AA sequence:RefSeq:WP_016729340.1
COORDINATES: similar to AA sequence:RefSeq:WP_006566223.1
COORDINATES: similar to AA sequence:RefSeq:WP_003001432.1
COORDINATES: similar to AA sequence:RefSeq:WP_004602056.1
COORDINATES: similar to AA sequence:RefSeq:WP_004111719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994159.1
COORDINATES: similar to AA sequence:RefSeq:WP_004111702.1
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: similar to AA sequence:RefSeq:WP_019595454.1
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_015945002.1
COORDINATES: protein motif:HMM:NF014443.2
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_009298677.1
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:TIGR01353.1
GO:0008832 - dGTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: similar to AA sequence:RefSeq:WP_004614009.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004607736.1
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: protein motif:HMM:NF014602.2