Thermofilum adornatum 1505 chromosome, complete genome.
Archaea; Thermoproteota; Thermoprotei; Thermofilales; Thermofilaceae; Thermofilum.
Complete genome sequences of ten hyperthermophilic archaea reveal their metabolic capabilities and possible ecological roles
Submitted (25-FEB-2014) Lab of Molecular Cloning, Centre 'Bioengineering' RAS, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow 117312, Russia
REFSEQ INFORMATION: The reference sequence is identical to\nCP007493.1.\nBacteria available from Dr. E.A. Bonch-Osmolovskaia\n(elizaveta.bo@gmail.com).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 25x\nSequencing Technology :: 454 GS FLX Titanium; ABI 3730\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/09/2023 01:33:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,952\nCDSs (total) :: 1,904\nGenes (coding) :: 1,899\nCDSs (with protein) :: 1,899\nGenes (RNA) :: 48\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 1\nPseudo Genes (total) :: 5\nCDSs (without protein) :: 5\nPseudo Genes (ambiguous residues) :: 0 of 5\nPseudo Genes (frameshifted) :: 1 of 5\nPseudo Genes (incomplete) :: 4 of 5\nPseudo Genes (internal stop) :: 0 of 5\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Submitted as Thermofilum carboxyditrophus 1505 but later determined to be species adornatus
COORDINATES: similar to AA sequence:RefSeq:WP_018193625.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011752351.1
COORDINATES: protein motif:HMM:TIGR00094.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016982.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011752346.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028207.2
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752333.1
COORDINATES: protein motif:HMM:NF010367.0
GO:0003824 - catalytic activity [Evidence IEA]
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: protein motif:HMM:NF011481.0
COORDINATES: similar to AA sequence:RefSeq:WP_011752328.1
COORDINATES: protein motif:HMM:NF017088.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752370.1
COORDINATES: protein motif:HMM:TIGR00451.1
COORDINATES: protein motif:HMM:TIGR00270.2
COORDINATES: protein motif:HMM:TIGR03156.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752376.1
tRNA (cytidine(56)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF014102.2
TFIIB-type zinc ribbon-containing protein
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_011752380.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752382.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF013777.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF024703.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752401.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF023209.2
TFIIB-type zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752403.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752404.1
COORDINATES: protein motif:HMM:NF016219.2
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF019846.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF020014.2
COORDINATES: protein motif:HMM:NF041120.1
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752415.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752417.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752421.1
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: protein motif:HMM:NF012690.2
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000848.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752715.1
COORDINATES: protein motif:HMM:NF012509.2
COORDINATES: similar to AA sequence:RefSeq:WP_018193561.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752726.1
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752711.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752709.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753402.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753399.1
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF004617.0
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752706.1
COORDINATES: protein motif:HMM:TIGR01473.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016352.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752424.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF025092.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752429.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752431.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752432.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752433.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024248.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752440.1
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752443.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011752453.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752465.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014091.2
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752481.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752482.1
COORDINATES: protein motif:HMM:NF014527.2
class I SAM-dependent methyltransferase family protein
type II/IV secretion system ATPase subunit
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752461.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752460.1
COORDINATES: protein motif:HMM:NF019924.2
COORDINATES: protein motif:HMM:NF020660.2
COORDINATES: protein motif:HMM:TIGR00408.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF041097.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006020 - inositol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041098.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752489.1
GO:0047964 - glyoxylate reductase (NAD+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015170.2
COORDINATES: protein motif:HMM:NF020733.2
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012695.2
prenyltransferase/squalene oxidase repeat-containing protein
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752498.1
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:NF013209.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013916.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752504.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752562.1
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00729.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752561.1
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752556.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF013311.2
COORDINATES: protein motif:HMM:NF014605.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752549.1
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752547.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752546.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752544.1
COORDINATES: protein motif:HMM:NF015940.2
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF013979.2
pyruvoyl-dependent arginine decarboxylase
COORDINATES: protein motif:HMM:NF017026.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752542.1
COORDINATES: protein motif:HMM:NF014752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013987.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752528.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752514.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752519.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014048.2
GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752522.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752525.1
COORDINATES: protein motif:HMM:NF021490.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194773.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752568.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752570.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752571.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011752572.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF024808.2
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753466.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752580.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752582.1
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: protein motif:HMM:TIGR00532.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: similar to AA sequence:RefSeq:WP_011752596.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF037640.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752602.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752606.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752638.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011752641.1
COORDINATES: protein motif:HMM:NF039476.1
COORDINATES: protein motif:HMM:NF020581.2
COORDINATES: protein motif:HMM:NF015409.2
COORDINATES: protein motif:HMM:NF016765.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752609.1
COORDINATES: protein motif:HMM:NF012524.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752614.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF003210.0
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752669.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF010248.0
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752672.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752675.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752676.1
COORDINATES: protein motif:HMM:NF020083.2
COORDINATES: protein motif:HMM:NF006813.0
COORDINATES: similar to AA sequence:RefSeq:WP_011752682.1
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:NF003301.0
COORDINATES: protein motif:HMM:NF013843.2
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF021625.2
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
thiamine-phosphate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752695.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752700.1
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752734.1
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752735.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752737.1
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF004729.0
COORDINATES: similar to AA sequence:RefSeq:WP_011752743.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752745.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752746.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_011752747.1
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF004320.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_011752750.1
COORDINATES: protein motif:HMM:TIGR01974.1
COORDINATES: protein motif:HMM:NF012348.2
COORDINATES: protein motif:HMM:NF014068.2
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752754.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752755.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011752757.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_011752758.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF016612.2
neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015769.2
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: protein motif:HMM:NF015570.2
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: protein motif:HMM:TIGR01487.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006920.0
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF010167.0
GO:0015833 - peptide transport [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011753335.1
GO:0004565 - beta-galactosidase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752776.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011752777.1
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_011752784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752785.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752786.1
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF013307.2
COORDINATES: protein motif:HMM:TIGR00384.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752791.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01068.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF015889.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF025109.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752807.1
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753283.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein
COORDINATES: protein motif:HMM:NF014801.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF012441.2
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
orotidine 5'-phosphate decarboxylase / HUMPS family protein
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752820.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752821.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: protein motif:HMM:NF000796.0
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00277.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752826.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752828.1
COORDINATES: protein motif:HMM:NF040396.1
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752832.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752835.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752840.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752849.1
COORDINATES: protein motif:HMM:NF004862.0
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: protein motif:HMM:TIGR01316.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752854.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752855.1
COORDINATES: protein motif:HMM:NF013570.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752857.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752858.1
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:TIGR01978.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752869.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752871.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752872.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752873.1
COORDINATES: protein motif:HMM:TIGR02537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752878.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752880.1
COORDINATES: protein motif:HMM:NF013594.2
zinc finger Ran-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752885.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752886.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753132.1
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752889.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753330.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752890.1
GO:0016984 - ribulose-bisphosphate carboxylase activity [Evidence IEA]
type III ribulose-bisphosphate carboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_011752891.1
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:TIGR01439.1
COORDINATES: protein motif:HMM:NF014723.2
COORDINATES: protein motif:HMM:NF020334.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753034.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF006330.0
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752814.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752813.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752812.1
COORDINATES: protein motif:HMM:NF022932.2
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753315.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015588.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011753312.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753309.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753308.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753307.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:TIGR00427.1
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753296.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753295.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753294.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753291.1
COORDINATES: protein motif:HMM:NF013256.2
GO:0004559 - alpha-mannosidase activity [Evidence IEA]
GO:0006013 - mannose metabolic process [Evidence IEA]
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00785.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_011753275.1
GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753274.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_011753273.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF014101.2
COORDINATES: protein motif:HMM:TIGR00504.1
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753253.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753254.1
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753259.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753154.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752795.1
COORDINATES: protein motif:HMM:NF014675.2
beta-galactosidase trimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753211.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753210.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753209.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753208.1
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:NF024058.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753053.1
COORDINATES: protein motif:HMM:NF027249.2
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF019540.2
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: protein motif:HMM:NF013226.2
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: protein motif:HMM:NF017729.2
COORDINATES: protein motif:HMM:NF014043.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF021560.2
COORDINATES: protein motif:HMM:NF012483.2
COORDINATES: protein motif:HMM:TIGR01208.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: protein motif:HMM:TIGR01181.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013103.2
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: protein motif:HMM:NF021634.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF020874.2
COORDINATES: protein motif:HMM:NF025017.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014411.2
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR04076.1
COORDINATES: protein motif:HMM:NF039192.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF025442.2
COORDINATES: protein motif:HMM:NF022773.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF013334.2
hydrogenase nickel incorporation protein HypA
COORDINATES: similar to AA sequence:RefSeq:WP_011753351.1
COORDINATES: protein motif:HMM:NF005762.0
COORDINATES: protein motif:HMM:TIGR01897.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753051.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753202.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753195.1
COORDINATES: protein motif:HMM:NF016155.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194595.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: protein motif:HMM:NF018012.2
trimethylamine methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753130.1
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: protein motif:HMM:NF015851.2
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194640.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753075.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753074.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF014671.2
GO:0016783 - sulfurtransferase activity [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_011753066.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753062.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752793.1
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF001097.0
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019009.2
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: protein motif:HMM:NF014100.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753167.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753168.1
COORDINATES: protein motif:HMM:NF027582.2
COORDINATES: protein motif:HMM:TIGR00072.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023096.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_011753182.1
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753178.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753173.1
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753192.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753193.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012925.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF014845.2
COORDINATES: protein motif:HMM:TIGR01702.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: protein motif:HMM:NF012566.2
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF005012.1
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753155.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753092.1
COORDINATES: protein motif:HMM:NF022100.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753159.1
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026297.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752963.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752964.1
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF012306.2
retroviral-like aspartic protease family protein
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753419.1
COORDINATES: protein motif:HMM:NF016364.2
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013995.2
COORDINATES: protein motif:HMM:NF014040.2
COORDINATES: protein motif:HMM:NF024733.2
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
BREX system Lon protease-like protein BrxL
COORDINATES: protein motif:HMM:NF025665.2
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753041.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF017494.2
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: protein motif:HMM:NF006084.0
COORDINATES: protein motif:HMM:NF015882.2
COORDINATES: protein motif:HMM:NF015056.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: protein motif:HMM:NF014074.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF039707.1
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: protein motif:HMM:TIGR00251.3
COORDINATES: similar to AA sequence:RefSeq:WP_011752912.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193414.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752909.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752908.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194360.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011752851.1
COORDINATES: protein motif:HMM:NF039803.1
COORDINATES: protein motif:HMM:NF003296.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752903.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF014029.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752893.1
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: protein motif:HMM:TIGR04053.2
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753038.1
nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF024981.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753200.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753197.1
COORDINATES: protein motif:HMM:TIGR02822.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753230.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753232.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF015232.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753240.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753239.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753238.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011753236.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF024850.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: protein motif:HMM:NF009466.0
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: protein motif:HMM:NF039222.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF024694.2
DNA polymerase ligase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752853.1
COORDINATES: protein motif:HMM:NF024851.2
GO:0018491 - 2-oxobutyrate synthase activity [Evidence IEA]; GO:0047553 - 2-oxoglutarate synthase activity [Evidence IEA]; GO:0019164 - pyruvate synthase activity [Evidence IEA]
2-oxoacid:ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF041171.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: protein motif:HMM:NF009409.0
COORDINATES: similar to AA sequence:RefSeq:WP_011753442.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752917.1
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753044.1
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013250.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF027117.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: similar to AA sequence:RefSeq:WP_011753327.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753328.1
COORDINATES: protein motif:HMM:NF014710.2
COORDINATES: protein motif:HMM:NF014090.2
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753323.1
COORDINATES: protein motif:HMM:TIGR01685.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753432.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753156.1
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753428.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752637.1
COORDINATES: protein motif:HMM:NF013530.2
SDR family NAD(P)-dependent oxidoreductase
endonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753242.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194644.1
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF013795.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753340.1
COORDINATES: protein motif:HMM:NF041004.1
COORDINATES: protein motif:HMM:NF017686.2
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
GO:0008218 - bioluminescence [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_041589967.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753220.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753221.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753439.1
COORDINATES: protein motif:HMM:NF025034.2
COORDINATES: protein motif:HMM:NF014001.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753438.1
GO:0008184 - glycogen phosphorylase activity [Evidence IEA]
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011753435.1
COORDINATES: protein motif:HMM:NF028222.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753451.1
GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF017200.2
COORDINATES: protein motif:HMM:NF016326.2
COORDINATES: protein motif:HMM:NF024138.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:TIGR01647.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_018193830.1
COORDINATES: protein motif:HMM:NF017941.2
COORDINATES: protein motif:HMM:NF024595.2
COORDINATES: protein motif:HMM:NF019464.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753462.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753464.1
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753468.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753473.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753476.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753477.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011753478.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_011753481.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753482.1
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753265.1
COORDINATES: protein motif:HMM:NF013481.2
twin-arginine translocation signal domain-containing protein
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF017933.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753484.1
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753487.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753488.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753490.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753493.1
COORDINATES: protein motif:HMM:NF016050.2
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: similar to AA sequence:RefSeq:WP_011753499.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751677.1
COORDINATES: similar to AA sequence:RefSeq:WP_011753266.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193700.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751678.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751679.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751680.1
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751685.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751686.1
COORDINATES: protein motif:HMM:NF021350.2
AAA-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751689.1
COORDINATES: protein motif:HMM:NF016874.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751693.1
Lrp/AsnC family transcriptional regulator
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF006230.0
COORDINATES: protein motif:HMM:NF039181.1
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751716.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF016131.2
formate dehydrogenase accessory protein FdhE
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751729.1
COORDINATES: protein motif:HMM:NF022995.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF016443.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751735.1
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751737.1
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: protein motif:HMM:NF021348.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751746.1
TIGR04190 family B12-binding domain/radical SAM domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751748.1
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
TIGR04084 family radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:NF012300.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751756.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011751760.1
COORDINATES: protein motif:HMM:NF039193.1
COORDINATES: protein motif:HMM:NF014079.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751767.1
COORDINATES: protein motif:HMM:TIGR03327.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751769.1
COORDINATES: protein motif:HMM:NF014084.2
COORDINATES: protein motif:HMM:NF033823.0
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
archaemetzincin family Zn-dependent metalloprotease
COORDINATES: protein motif:HMM:NF013934.2
COORDINATES: protein motif:HMM:NF036989.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751778.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751780.1
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751785.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011751786.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751787.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751794.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751795.1
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013143.2
COORDINATES: protein motif:HMM:NF003267.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751804.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751805.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF014713.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751810.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751811.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012239.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751815.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:TIGR00087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751818.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751820.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751821.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751823.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751824.1
delta-60 repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751829.1
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011751831.1
COORDINATES: protein motif:HMM:NF014663.2
COORDINATES: protein motif:HMM:NF013222.2
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751839.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751842.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751843.1
COORDINATES: protein motif:HMM:NF009007.0
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751848.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751849.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751851.1
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751869.1
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751871.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF005049.0
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751886.1
GO:0006325 - chromatin organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751887.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: protein motif:HMM:NF014231.2
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:TIGR03399.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF040950.1
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: protein motif:HMM:TIGR03683.1
COORDINATES: protein motif:HMM:NF003099.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751899.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751900.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751903.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751904.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751905.1
COORDINATES: protein motif:HMM:NF014637.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751907.1
FaeA/PapI family transcriptional regulator
COORDINATES: protein motif:HMM:NF006341.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751909.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751913.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751914.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751915.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751916.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751917.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751919.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751921.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011751922.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: protein motif:HMM:NF012255.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751930.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751932.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751938.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02928.1
COORDINATES: protein motif:HMM:NF003229.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751943.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751944.1
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: protein motif:HMM:NF001617.0
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011751948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751949.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751951.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751952.1
COORDINATES: protein motif:HMM:NF005004.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751954.1
COORDINATES: protein motif:HMM:NF001988.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751956.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751957.1
NusA-like transcription termination signal-binding factor
COORDINATES: similar to AA sequence:RefSeq:WP_011751958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751959.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751961.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751962.1
COORDINATES: protein motif:HMM:NF003211.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF037370.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751965.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751966.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194844.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751969.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751971.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751972.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751973.1
COORDINATES: protein motif:HMM:NF028087.2
COORDINATES: protein motif:HMM:NF016167.2
COORDINATES: protein motif:HMM:NF015960.2
COORDINATES: similar to AA sequence:RefSeq:WP_011751977.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751979.1
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015631.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752234.1
translation initiation factor IF-2 subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_011751981.1
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011751983.1
COORDINATES: protein motif:HMM:TIGR03684.1
COORDINATES: protein motif:HMM:NF014076.2
COORDINATES: protein motif:HMM:TIGR00177.1
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_011751987.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF006399.0
COORDINATES: protein motif:HMM:TIGR01251.1
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00342.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF003326.0
COORDINATES: similar to AA sequence:RefSeq:WP_011751999.1
COORDINATES: protein motif:HMM:TIGR02187.1
COORDINATES: protein motif:HMM:TIGR00021.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF016164.2
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006358.0
anaerobic ribonucleoside triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011752010.1
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF013935.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752016.1
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752022.1
COORDINATES: protein motif:HMM:NF013029.2
COORDINATES: protein motif:HMM:NF015812.2
COORDINATES: protein motif:HMM:NF016787.2
COORDINATES: protein motif:HMM:TIGR01213.2
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_011752029.1
COORDINATES: protein motif:HMM:TIGR00432.2
GO:0016763 - pentosyltransferase activity [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: similar to AA sequence:RefSeq:WP_011752032.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014032.2
GO:0048500 - signal recognition particle [Evidence IEA]
GO:0008312 - 7S RNA binding [Evidence IEA]
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752034.1
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: similar to AA sequence:RefSeq:WP_011752035.1
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: protein motif:HMM:NF006817.0
COORDINATES: protein motif:HMM:NF022908.2
COORDINATES: protein motif:HMM:NF025040.2
GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752039.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752040.1
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: protein motif:HMM:NF021952.2
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF016098.2
COORDINATES: protein motif:HMM:NF010340.0
COORDINATES: protein motif:HMM:NF012600.2
transcription initiation factor IIB family protein
COORDINATES: protein motif:HMM:NF011121.0
functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011752051.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:TIGR00308.1
GO:0004809 - tRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanine(10)-N(2))-dimethyltransferase
COORDINATES: protein motif:HMM:NF013990.2
translation initiation factor IF-2 subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011752058.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0046033 - AMP metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013197.2
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013993.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013994.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752064.1
COORDINATES: protein motif:HMM:NF014474.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752066.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752067.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752069.1
COORDINATES: protein motif:HMM:NF021897.2
OB-fold nucleic acid binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: protein motif:HMM:TIGR00405.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752081.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752082.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752083.1
COORDINATES: protein motif:HMM:NF013621.2
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752088.1
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:NF006333.0
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011752090.1
COORDINATES: protein motif:HMM:NF021421.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752094.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752095.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752096.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752098.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:TIGR03674.1
COORDINATES: protein motif:HMM:TIGR00574.1
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR00293.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001981.1
COORDINATES: protein motif:HMM:NF003114.0
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011752109.1
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:TIGR02175.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752242.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752243.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752244.1
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752246.1
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF011463.0
COORDINATES: similar to AA sequence:RefSeq:WP_011752126.1
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: similar to AA sequence:RefSeq:WP_011752123.1
COORDINATES: protein motif:HMM:NF013450.2
COORDINATES: protein motif:HMM:NF015946.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752135.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: similar to AA sequence:RefSeq:WP_011752136.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752137.1
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752144.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194122.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752146.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752147.1
COORDINATES: protein motif:HMM:TIGR00323.1
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: protein motif:HMM:NF018444.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752153.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752249.1
COORDINATES: similar to AA sequence:RefSeq:WP_020269088.1
COORDINATES: protein motif:HMM:NF003219.0
COORDINATES: protein motif:HMM:TIGR00012.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752159.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752158.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752157.1
COORDINATES: protein motif:HMM:NF015952.2
GO:0016301 - kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019876.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752247.1
COORDINATES: protein motif:HMM:NF016842.2
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752130.1
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752115.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03665.1
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752186.1
COORDINATES: protein motif:HMM:NF020031.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194193.1
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752190.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF034126.3
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:NF021368.2
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF011470.1
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752113.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752182.1
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752181.1
COORDINATES: protein motif:HMM:NF002096.0
stress response translation initiation inhibitor YciH
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752174.1
signal recognition particle receptor subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011752173.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752172.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752171.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752169.1
COORDINATES: protein motif:HMM:NF017704.2
DNA replication complex GINS family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752167.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752165.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752254.1
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011752253.1
COORDINATES: protein motif:HMM:NF003181.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
exosome complex RNA-binding protein Rrp4
COORDINATES: similar to AA sequence:RefSeq:WP_011752251.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752163.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011752201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752207.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751725.1
COORDINATES: protein motif:HMM:NF024988.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF016232.2
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF039417.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752210.1
acetyl ornithine aminotransferase family protein
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752212.1
COORDINATES: protein motif:HMM:NF013974.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752214.1
GO:0019164 - pyruvate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021370.2
COORDINATES: protein motif:HMM:TIGR00050.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752256.1
COORDINATES: protein motif:HMM:NF015018.2
COORDINATES: protein motif:HMM:TIGR01884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752217.1
COORDINATES: protein motif:HMM:NF021475.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752219.1
COORDINATES: protein motif:HMM:TIGR00456.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752233.1
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: protein motif:HMM:NF015545.2
COORDINATES: protein motif:HMM:NF015428.2
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752237.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752238.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194642.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752258.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752261.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752262.1
COORDINATES: protein motif:HMM:NF024924.2
COORDINATES: protein motif:HMM:NF001199.0
COORDINATES: similar to AA sequence:RefSeq:WP_011752268.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752269.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752273.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF012899.2
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752279.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752280.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752282.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752284.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01578.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011752286.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752287.1
COORDINATES: protein motif:HMM:TIGR00324.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752289.1
COORDINATES: protein motif:HMM:NF014011.2
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752293.1
GO:0030337 - DNA polymerase processivity factor activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
proliferating cell nuclear antigen (pcna)
COORDINATES: protein motif:HMM:TIGR01384.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752295.1
COORDINATES: protein motif:HMM:NF013372.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752297.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021513.2
COORDINATES: protein motif:HMM:NF016984.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752301.1
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: protein motif:HMM:NF015846.2
preprotein translocase subunit Sec61beta
COORDINATES: protein motif:HMM:NF014565.2
GO:0004576 - oligosaccharyl transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011753500.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752309.1
translation initiation factor IF-2 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011752310.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752311.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752314.1
translation elongation factor EF-1 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011752315.1
COORDINATES: protein motif:HMM:TIGR00310.1
ZPR1 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF001647.0
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011752320.1
COORDINATES: protein motif:HMM:NF014030.2
GO:0016272 - prefoldin complex [Evidence IEA]
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011752325.1
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02128.1
bifunctional phosphoglucose/phosphomannose isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011752360.1
COORDINATES: similar to AA sequence:RefSeq:WP_011752361.1
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752359.1
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: similar to AA sequence:RefSeq:WP_011752357.1
COORDINATES: protein motif:HMM:TIGR00522.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: protein motif:HMM:NF014099.2
COORDINATES: protein motif:HMM:TIGR00501.1