Pyrolobus fumarii 1A, complete sequence.
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.
Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A)
Submitted (03-JUN-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002838.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4089495\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Pyrolobus fumarii 1A, DSM 11204\ncollection_date :: Missing\nlat_lon :: Missing\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Missing\nenvironment :: Deep sea, Hydrothermal vent, Marine\nnum_replicons :: 1\nref_biomaterial :: DSM 11204\nbiotic_relationship :: Free living\ntrophic_level :: Chemolithoautotroph\nrel_to_oxygen :: Aerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi02934\nType Strain :: Yes\nGreengenes ID :: 878\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: Prodigal 1.4, GenePRIMP\nIsolation Site :: Hydrothermally heated black smoker wall at\n the TAG site at the Mid Atlantic Ridge\n (depth 3650 meters)\nCell Shape :: Coccus-shaped\nTemperature Range :: Hyperthermophile\nTemperature Optimum :: 106C\npH :: 5.5\nGram Staining :: Gram-\nDiseases :: None\nPhenotypes :: Barophile\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 00:38:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,005\nCDSs (total) :: 1,953\nGenes (coding) :: 1,947\nCDSs (with protein) :: 1,947\nGenes (RNA) :: 52\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 2\nPseudo Genes (total) :: 6\nCDSs (without protein) :: 6\nPseudo Genes (ambiguous residues) :: 0 of 6\nPseudo Genes (frameshifted) :: 3 of 6\nPseudo Genes (incomplete) :: 3 of 6\nPseudo Genes (internal stop) :: 0 of 6\nCRISPR Arrays :: 7\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_010865779.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014056.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838883.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013658.2
GO:0003824 - catalytic activity [Evidence IEA]
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142683.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF003345.0
COORDINATES: similar to AA sequence:RefSeq:WP_011821254.1
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838408.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822497.1
COORDINATES: similar to AA sequence:RefSeq:WP_013304243.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013129862.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866152.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142604.1
COORDINATES: protein motif:HMM:NF012766.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024581.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303946.1
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822229.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821464.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821372.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: similar to AA sequence:RefSeq:WP_011822590.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562415.1
COORDINATES: similar to AA sequence:RefSeq:WP_012607991.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866573.1
COORDINATES: protein motif:HMM:NF018047.2
lipopolysaccharide kinase InaA family protein
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF013250.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822164.1
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821753.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821451.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018349.2
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013304175.1
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF037920.2
COORDINATES: protein motif:HMM:NF021916.2
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]; GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142446.1
COORDINATES: protein motif:HMM:NF023395.2
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822760.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822011.1
COORDINATES: protein motif:HMM:TIGR01491.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821511.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866077.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822511.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF014774.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822513.1
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: protein motif:HMM:TIGR00052.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014845.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866166.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866167.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822731.1
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822729.1
COORDINATES: protein motif:HMM:NF014419.2
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: similar to AA sequence:RefSeq:WP_010865794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821653.1
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821651.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: protein motif:HMM:NF028302.2
COORDINATES: protein motif:HMM:NF014044.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302613.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF014527.2
COORDINATES: similar to AA sequence:RefSeq:WP_012608734.1
protein-L-isoaspartate O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011822509.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822503.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998544.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822498.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302572.1
COORDINATES: protein motif:HMM:NF013322.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821802.1
COORDINATES: protein motif:HMM:NF033823.0
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
archaemetzincin family Zn-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_011998048.1
COORDINATES: protein motif:HMM:NF012497.2
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014296.2
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014767935.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821761.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822241.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821738.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821573.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821397.1
COORDINATES: protein motif:HMM:NF011161.0
COORDINATES: similar to AA sequence:RefSeq:WP_011821385.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821370.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562195.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017200.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562264.1
class I SAM-dependent methyltransferase family protein
COORDINATES: protein motif:HMM:NF017634.2
COORDINATES: protein motif:HMM:NF006351.0
COORDINATES: protein motif:HMM:NF015940.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822554.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF016164.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302638.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821274.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF016219.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866477.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839589.1
GO:0000398 - mRNA splicing, via spliceosome [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA]
U6 snRNA-associated Sm-like protein LSm6
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014768063.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821201.1
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014736987.1
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF015846.2
preprotein translocase subunit Sec61beta
COORDINATES: protein motif:HMM:NF002621.0
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF014015.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123269.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822794.1
signal recognition particle protein Srp54
COORDINATES: protein motif:HMM:TIGR01213.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_011822792.1
COORDINATES: protein motif:HMM:NF015812.2
COORDINATES: similar to AA sequence:RefSeq:WP_013128903.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011822787.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142504.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142503.1
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0090560 - 2-(3-amino-3-carboxypropyl)histidine synthase activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1/2
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822782.1
exosome complex RNA-binding protein Csl4
COORDINATES: similar to AA sequence:RefSeq:WP_011822781.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822780.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822778.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822777.1
GO:0030337 - DNA polymerase processivity factor activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
proliferating cell nuclear antigen (pcna)
COORDINATES: protein motif:HMM:NF014011.2
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
DNA primase small subunit domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018193911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838940.1
translation initiation factor IF-2 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013128923.1
COORDINATES: protein motif:HMM:NF003114.0
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: protein motif:HMM:NF014079.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF014091.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838924.1
COORDINATES: protein motif:HMM:NF021653.2
COORDINATES: protein motif:HMM:NF014658.2
COORDINATES: protein motif:HMM:TIGR00423.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821568.1
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822703.1
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: protein motif:HMM:NF019876.2
TFIIB-type zinc ribbon-containing protein
COORDINATES: protein motif:HMM:NF012300.2
COORDINATES: similar to AA sequence:RefSeq:WP_014768138.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302541.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:TIGR00446.1
COORDINATES: protein motif:HMM:NF015610.2
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562793.1
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011822706.1
COORDINATES: protein motif:HMM:TIGR03675.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822708.1
COORDINATES: similar to AA sequence:RefSeq:WP_014736888.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839234.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822711.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866639.1
COORDINATES: similar to AA sequence:RefSeq:WP_013130259.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822714.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822715.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562878.1
NusA-like transcription termination signal-binding factor
COORDINATES: similar to AA sequence:RefSeq:WP_012609037.1
COORDINATES: protein motif:HMM:NF014618.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866632.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143939.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
translation elongation factor EF-1 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013303693.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998494.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010867037.1
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608199.1
formate--phosphoribosylaminoimidazolecarboxamide ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013562356.1
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF014059.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_013304361.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014448.2
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF013334.2
GO:0051604 - protein maturation [Evidence IEA]
hydrogenase/urease maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF008957.0
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822390.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006333.0
COORDINATES: similar to AA sequence:RefSeq:WP_011821622.1
GO:0003711 - transcription elongation factor activity [Evidence IEA]
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:NF015952.2
GTP-dependent dephospho-CoA kinase family protein
COORDINATES: protein motif:HMM:NF021347.2
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_010865600.1
COORDINATES: protein motif:HMM:NF015513.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF014716.2
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_011822017.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF009828.0
COORDINATES: similar to AA sequence:RefSeq:WP_011821980.1
COORDINATES: protein motif:HMM:NF014433.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
TRC40/GET3/ArsA family transport-energizing ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011998168.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0047988 - hydroxyacid-oxoacid transhydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866548.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_011821898.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562275.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: similar to AA sequence:RefSeq:WP_014736885.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822061.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839631.1
COORDINATES: protein motif:HMM:NF017868.2
gamma-glutamylcyclotransferase family protein
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562092.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561638.1
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123488.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123259.1
COORDINATES: protein motif:HMM:NF021560.2
COORDINATES: protein motif:HMM:NF025442.2
COORDINATES: protein motif:HMM:NF025263.2
COORDINATES: protein motif:HMM:NF028105.2
COORDINATES: protein motif:HMM:NF013561.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014027436.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF039803.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026087.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014026425.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026422.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026083.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302793.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010865599.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_013302506.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998679.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012675.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012235.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302766.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142859.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF037435.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821853.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF024601.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998655.1
[LysW]-aminoadipate/[LysW]-glutamate kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014736833.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026095.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821618.1
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822639.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123115.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822056.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822305.1
COORDINATES: protein motif:HMM:NF016364.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822069.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822067.1
COORDINATES: protein motif:HMM:NF013648.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013219.2
protein-tyrosine phosphatase family protein
COORDINATES: protein motif:HMM:TIGR02583.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-A CRISPR-associated protein Cas7/Csa2
COORDINATES: protein motif:HMM:TIGR01874.1
type I-A CRISPR-associated protein Cas5a
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026679.1
dual specificity protein phosphatase family protein
COORDINATES: protein motif:HMM:TIGR01898.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:NF023885.2
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: similar to AA sequence:RefSeq:WP_010865623.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865622.1
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014043.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822545.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: similar to AA sequence:RefSeq:WP_014026303.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303260.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303009.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037100.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865953.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142807.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838630.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015630.2
COORDINATES: protein motif:HMM:NF021162.2
COORDINATES: protein motif:HMM:NF017669.2
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: similar to AA sequence:RefSeq:WP_013143222.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: protein motif:HMM:NF013835.2
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017803.2
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: protein motif:HMM:NF019826.2
COORDINATES: protein motif:HMM:TIGR01596.1
COORDINATES: protein motif:HMM:TIGR02593.1
COORDINATES: protein motif:HMM:NF014018.2
DevR family CRISPR-associated autoregulator
COORDINATES: similar to AA sequence:RefSeq:WP_013303008.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026060.1
COORDINATES: protein motif:HMM:TIGR01550.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014025912.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025884.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821850.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026316.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013143229.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562362.1
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026135.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821644.1
GO:0004809 - tRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanine(10)-N(2))-dimethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011821643.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821797.1
COORDINATES: protein motif:HMM:NF016982.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821871.1
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:NF014703.2
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021571.2
COORDINATES: protein motif:HMM:NF023096.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866511.1
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822110.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822023.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:NF017729.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026740.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026781.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821778.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: similar to AA sequence:RefSeq:WP_013129812.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821329.1
anaerobic ribonucleoside triphosphate reductase
COORDINATES: protein motif:HMM:TIGR00021.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF016330.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011998565.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821839.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194644.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822314.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821626.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822327.1
COORDINATES: protein motif:HMM:NF015947.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821552.1
COORDINATES: protein motif:HMM:NF012936.2
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026773.1
COORDINATES: protein motif:HMM:NF002598.0
deoxyuridine 5'-triphosphate nucleotidohydrolase
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF014867.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736744.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF014080.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561761.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838642.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821229.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014002.2
COORDINATES: protein motif:HMM:NF012441.2
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
orotidine 5'-phosphate decarboxylase / HUMPS family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821428.1
COORDINATES: protein motif:HMM:NF014420.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838307.1
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866051.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866050.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF014750.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822201.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303518.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF024258.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123104.1
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: protein motif:HMM:NF012744.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562665.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562667.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866207.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010866518.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_012608007.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822012.1
COORDINATES: protein motif:HMM:NF020132.2
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
thiamine-phosphate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998418.1
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_012608090.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF013920.2
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866187.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821989.1
cystathionine gamma-synthase family protein
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01251.1
GO:0002189 - ribose phosphate diphosphokinase complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303599.1
GO:0019164 - pyruvate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821843.1
pyruvate flavodoxin/ferredoxin oxidoreductase domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821841.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013304228.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821579.1
COORDINATES: similar to AA sequence:RefSeq:WP_014766971.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866496.1
stress response translation initiation inhibitor YciH
COORDINATES: protein motif:HMM:NF015561.2
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021461.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821553.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821790.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821791.1
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303966.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015084.2
biotin/lipoate A/B protein ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012122984.1
COORDINATES: protein motif:HMM:NF024212.2
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012123542.1
GO:0006526 - arginine biosynthetic process [Evidence IEA]; GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
alpha-aminoadipate/glutamate carrier protein LysW/ArgW
COORDINATES: similar to AA sequence:RefSeq:WP_011998093.1
COORDINATES: protein motif:HMM:NF013539.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998339.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011821620.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866184.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822054.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011821495.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012432.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821493.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011821492.1
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012123543.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866387.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013561608.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867067.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026323.1
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: similar to AA sequence:RefSeq:WP_012608058.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303303.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143648.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF024747.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026787.1
COORDINATES: protein motif:HMM:NF024703.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017924.2
COORDINATES: protein motif:HMM:NF018696.2
COORDINATES: protein motif:HMM:TIGR04013.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
TIGR04013 family B12-binding domain/radical SAM domain-containing protein
COORDINATES: protein motif:HMM:NF021235.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024839.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123557.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562324.1
COORDINATES: protein motif:HMM:NF020334.2
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736835.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821267.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_011821266.1
COORDINATES: protein motif:HMM:NF022430.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866599.1
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:NF015181.2
molybdopterin-guanine dinucleotide biosynthesis protein MobB
COORDINATES: similar to AA sequence:RefSeq:WP_011821934.1
COORDINATES: protein motif:HMM:NF013411.2
GO:0070497 - 6-carboxy-5,6,7,8-tetrahydropterin synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142501.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011998414.1
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF012512.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent cysteine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018193760.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866941.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016341.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008193 - tRNA guanylyltransferase activity [Evidence IEA]
tRNA(His) guanylyltransferase Thg1 family protein
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012861.2
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014767344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821732.1
COORDINATES: protein motif:HMM:NF013993.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014013.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123576.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013304372.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839608.1
COORDINATES: protein motif:HMM:NF014033.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0031419 - cobalamin binding [Evidence IEA]; GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009235 - cobalamin metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303583.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822396.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822275.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021490.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866428.1
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: protein motif:HMM:TIGR02751.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013129189.1
COORDINATES: protein motif:HMM:NF014560.2
COORDINATES: protein motif:HMM:NF016816.2
COORDINATES: protein motif:HMM:NF013640.2
COORDINATES: similar to AA sequence:RefSeq:WP_014767469.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_013562208.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: protein motif:HMM:NF021528.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822420.1
COORDINATES: similar to AA sequence:RefSeq:WP_014767668.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012717.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193764.1
GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302771.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001753.0
GO:0017136 - NAD-dependent histone deacetylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561561.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838988.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838990.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822659.1
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012122898.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025910.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025905.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867066.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822605.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866890.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822607.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142510.1
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822271.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608913.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193728.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142380.1
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_013562845.1
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123137.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822679.1
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821731.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123087.1
formate--phosphoribosylaminoimidazolecarboxamide ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011839388.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014737211.1
COORDINATES: protein motif:HMM:NF040647.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011821718.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737213.1
COORDINATES: protein motif:HMM:NF014582.2
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998266.1
COORDINATES: protein motif:HMM:NF013226.2
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011821524.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998507.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821727.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821725.1
COORDINATES: similar to AA sequence:RefSeq:WP_013130236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821578.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866817.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142587.1
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838792.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302831.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822052.1
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_013143618.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821697.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822092.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866862.1
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: similar to AA sequence:RefSeq:WP_013143493.1
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: similar to AA sequence:RefSeq:WP_013562393.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143785.1
GO:0006325 - chromatin organization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF017266.2
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822143.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562735.1
COORDINATES: similar to AA sequence:RefSeq:WP_014736908.1
COORDINATES: protein motif:HMM:NF018546.2
A24 family peptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013303914.1
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822132.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822131.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822744.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822734.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822735.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822736.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737056.1
COORDINATES: protein motif:HMM:TIGR00293.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822739.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR00327.1
GO:0006886 - intracellular protein transport [Evidence IEA]
protein translocase SEC61 complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_012123320.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822742.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822743.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839383.1
COORDINATES: protein motif:HMM:NF016199.2
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF014494.2
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821250.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821999.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822610.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821353.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF026098.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303674.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF037142.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822615.1
COORDINATES: protein motif:HMM:NF021421.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123266.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014102.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822294.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867079.1
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF026297.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822298.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998510.1
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_013304023.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010867082.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_011821318.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013303057.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: protein motif:HMM:NF028455.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838742.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839112.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821712.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562867.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998221.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866568.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821708.1
COORDINATES: protein motif:HMM:NF012407.2
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822231.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF013132.2
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF039181.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822284.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822277.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838506.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822041.1
COORDINATES: protein motif:HMM:NF013842.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821580.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821612.1
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821672.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010866257.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821562.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821561.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF015851.2
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011838402.1
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821632.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821320.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998115.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821545.1
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026783.1
COORDINATES: protein motif:HMM:TIGR01512.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998563.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822536.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822723.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143083.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123433.1
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123434.1
COORDINATES: protein motif:HMM:NF014171.2
TrkA C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012472.2
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143173.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143306.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821481.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026010.1
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:NF021521.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821838.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025983.1
COORDINATES: protein motif:HMM:TIGR01439.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142572.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822260.1
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026771.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026732.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865630.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303178.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822673.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302981.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821766.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026704.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821418.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143215.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026685.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026876.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998121.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129881.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
nuclease-related domain-containing protein
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014767198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821833.1
COORDINATES: protein motif:HMM:NF023043.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822753.1
COORDINATES: protein motif:HMM:NF016167.2
COORDINATES: similar to AA sequence:RefSeq:WP_014027374.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026644.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821327.1
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026793.1
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123217.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123218.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006412.0
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011998629.1
4-hydroxyphenylacetate 3-hydroxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821348.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821343.1
COORDINATES: protein motif:HMM:TIGR00384.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: similar to AA sequence:RefSeq:WP_011821611.1
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142901.1
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013129171.1
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839269.1
COORDINATES: protein motif:HMM:NF013916.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865915.1
COORDINATES: protein motif:HMM:NF003218.0
COORDINATES: similar to AA sequence:RefSeq:WP_010865906.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF014076.2
tRNA intron endonuclease catalytic domain-containing protein
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013129663.1
GO:0008452 - RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822119.1
tRNA(Met) cytidine acetyltransferase TmcA
COORDINATES: similar to AA sequence:RefSeq:WP_011821633.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822299.1
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012506.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142645.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866117.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: similar to AA sequence:RefSeq:WP_014766981.1
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014101.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142846.1
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014766829.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608476.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822525.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123517.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123518.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822522.1
molybdopterin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF014112.2
choice-of-anchor V domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822531.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822670.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123099.1
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:TIGR00259.1
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014060.2
COORDINATES: protein motif:HMM:NF003372.0
COORDINATES: protein motif:HMM:NF002281.0
COORDINATES: protein motif:HMM:NF037131.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821232.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF016765.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866799.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302768.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011822330.1
COORDINATES: protein motif:HMM:NF013895.2
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821456.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998713.1
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838799.1
COORDINATES: protein motif:HMM:NF016842.2
GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043023 - ribosomal large subunit binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302760.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF014726.2
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: similar to AA sequence:RefSeq:WP_011822529.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822006.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_011822005.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822004.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014641.2
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0006782 - protoporphyrinogen IX biosynthetic process [Evidence IEA]; GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010867041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608189.1
phosphoribosylformylglycinamidine synthase I
COORDINATES: similar to AA sequence:RefSeq:WP_012608190.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:NF025304.2
COORDINATES: protein motif:HMM:NF012444.2
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: protein motif:HMM:NF015889.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737731.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839498.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821587.1
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838760.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_011839525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013304037.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129965.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822374.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865975.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821638.1
GO:0046128 - purine ribonucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017373.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839568.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013129271.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303684.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822649.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866759.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866401.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561684.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013303495.1
COORDINATES: protein motif:HMM:NF021607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821309.1
COORDINATES: protein motif:HMM:TIGR01978.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF024912.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998443.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561715.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014767013.1
COORDINATES: similar to AA sequence:RefSeq:WP_013304027.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF013168.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013304030.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822100.1
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821647.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821655.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821625.1
translation initiation factor IF-2 subunit gamma
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821930.1
COORDINATES: protein motif:HMM:NF012673.2
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01487.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822689.1
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015411.2
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013887.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
3-dehydroquinate synthase family protein
COORDINATES: protein motif:HMM:NF012670.2
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014234.2
bifunctional chorismate mutase/prephenate dehydrogenase
COORDINATES: protein motif:HMM:TIGR03992.1
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF015018.2
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: similar to AA sequence:RefSeq:WP_014738040.1
COORDINATES: protein motif:HMM:NF015418.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822411.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
HTH-type transcriptional regulator Lrs14
COORDINATES: protein motif:HMM:TIGR00310.1
ZPR1 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866696.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822407.1
GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [Evidence IEA]
digeranylgeranylglycerophospholipid reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011822406.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822402.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF002291.0
nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822400.1
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822399.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822414.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822415.1
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821450.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00857.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021903.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194445.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011821302.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866519.1
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123527.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822356.1
COORDINATES: protein motif:HMM:NF014565.2
GO:0004576 - oligosaccharyl transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822360.1
COORDINATES: similar to AA sequence:RefSeq:WP_013130044.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866654.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF001199.0
COORDINATES: similar to AA sequence:RefSeq:WP_011822351.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142802.1
COORDINATES: protein motif:HMM:TIGR01475.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822592.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123368.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822343.1
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866903.1
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142616.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866412.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865618.1
COORDINATES: protein motif:HMM:NF021370.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838850.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822389.1
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821657.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608969.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821253.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143420.1
COORDINATES: protein motif:HMM:NF015692.2
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866648.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
hydroxymethylglutaryl-CoA reductase (NADPH)
COORDINATES: similar to AA sequence:RefSeq:WP_013562576.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020899.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821909.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013129522.1
phosphopantothenate/pantothenate synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_011821312.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821602.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822276.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866914.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017017.2
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998642.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143383.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821236.1
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_014736838.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736841.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF020733.2
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822162.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822149.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: similar to AA sequence:RefSeq:WP_012608194.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011821674.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_011821599.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822435.1
COORDINATES: protein motif:HMM:NF020083.2
COORDINATES: protein motif:HMM:NF010367.0
COORDINATES: similar to AA sequence:RefSeq:WP_011822556.1
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF015640.2
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013143739.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822441.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143726.1
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: similar to AA sequence:RefSeq:WP_014737003.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865700.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822449.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865583.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123110.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822453.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822454.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998625.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013985.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822457.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123548.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302660.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143717.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143716.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839323.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822464.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129730.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839328.1
COORDINATES: similar to AA sequence:RefSeq:WP_048061861.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608820.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839331.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822472.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143705.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822475.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822476.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822477.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: similar to AA sequence:RefSeq:WP_013562670.1
COORDINATES: protein motif:HMM:NF002068.0
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123127.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF025087.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821213.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR00768.1
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839041.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838592.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866503.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821244.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822037.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822262.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000014 - single-stranded DNA endodeoxyribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006813.0
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822266.1
COORDINATES: protein motif:HMM:NF004419.0
COORDINATES: protein motif:HMM:NF021562.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822424.1
GO:0016279 - protein-lysine N-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562805.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF012687.2
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838448.1
COORDINATES: protein motif:HMM:NF040854.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302734.1
COORDINATES: protein motif:HMM:NF012783.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822429.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006328.0
COORDINATES: similar to AA sequence:RefSeq:WP_011822432.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822553.1
COORDINATES: protein motif:HMM:NF001747.0
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821581.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821746.1
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011821747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821748.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
exosome complex RNA-binding protein Rrp4
COORDINATES: similar to AA sequence:RefSeq:WP_011998246.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821750.1
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821751.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822072.1
COORDINATES: similar to AA sequence:RefSeq:WP_013128997.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF001975.0
COORDINATES: similar to AA sequence:RefSeq:WP_011998671.1
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821665.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: similar to AA sequence:RefSeq:WP_011822584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822585.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866175.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_010866186.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562345.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015232.2
COORDINATES: similar to AA sequence:RefSeq:WP_013143328.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821769.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821770.1
COORDINATES: protein motif:HMM:NF012600.2
transcription initiation factor IIB family protein
COORDINATES: protein motif:HMM:NF016308.2
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822013.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562418.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737707.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822009.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822010.1
COORDINATES: protein motif:HMM:NF040121.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142855.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822113.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822300.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123088.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01687.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303274.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822179.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822166.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866859.1
functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011821224.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562775.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822583.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011821210.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866067.1
COORDINATES: protein motif:HMM:NF013567.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822065.1
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822302.1
DNA polymerase beta domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013304146.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822243.1
proteasome assembly chaperone family protein
COORDINATES: protein motif:HMM:TIGR03188.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303673.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821594.1
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822000.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129870.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821805.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608999.1
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014443.2
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: similar to AA sequence:RefSeq:WP_014737969.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF016352.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:TIGR01972.1
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF012709.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012609016.1
COORDINATES: protein motif:HMM:TIGR01920.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014737449.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822043.1
COORDINATES: protein motif:HMM:NF012797.2
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822059.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821636.1
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123126.1
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011822247.1
translation initiation factor IF-2 subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011822434.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821854.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025877.1
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821540.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822685.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF021006.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562548.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821682.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865756.1
COORDINATES: protein motif:HMM:NF013847.2
COORDINATES: protein motif:HMM:NF016166.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822073.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_011822074.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822075.1
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_014736714.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303638.1
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822082.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998187.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822084.1
COORDINATES: similar to AA sequence:RefSeq:WP_014768109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822546.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839392.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822246.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821585.1
COORDINATES: protein motif:HMM:TIGR00055.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_011821374.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821291.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821292.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865900.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865896.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821705.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821706.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027504.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123389.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821605.1
GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014706.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF013183.2
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821298.1
signal recognition particle protein Srp19
COORDINATES: similar to AA sequence:RefSeq:WP_011822152.1
COORDINATES: protein motif:HMM:NF016312.2
GO:0051499 - D-aminoacyl-tRNA deacylase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821953.1