Pristis pectinata isolate sPriPec2 chromosome 42, sPriPec2.1.pri, whole genome shotgun sequence.
type: Entry
definition: Pristis pectinata isolate sPriPec2 chromosome 42, sPriPec2.1.pri, whole genome shotgun sequence.
sequence version: NC_067445.1
sequence date: 2023-02-26
sequence: sequence
division: CON
label: NC_067445.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA898594
dblink: SAMN12629505
keyword: WGS
keyword: RefSeq
source: Pristis pectinata (smalltooth sawfish)
organism: Pristis pectinata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rhinopristiformes; Pristidae; Pristis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM019896.1.\nAssembly name: sPriPec2.1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/19. The original whole-genome shotgun project has the\naccession WOXU00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 18-NOV-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-11-18; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: sPriPec2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.91x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_009764475.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 4200876
topology: linear
so has quality: SO_0000987
location: 1..4200876
location: region:1-4200876:1
RO_0002162: 685728

NC_067445
type: RefSeq
SIO_000068: refseq

PRJNA898594
type: BioProject
SIO_000068: bioproject

SAMN12629505
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4200876:1
position: 4200876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4200876:1:source
so part of: sequence
organism: Pristis pectinata
mol type: genomic DNA
isolate: sPriPec2
chromosome: 42
sex: female
tissue type: blood
dev stage: juvenile
country: USA: Tennessee Reef, Florida
lat lon: 24.766667 N 80.75 W
collection date: 01-Aug-2018
collected by: Bianca Prohaska

685728
type: Taxonomy
SIO_000068: taxonomy

LOC127566484
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566484
note: histone H2B 1/2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204578..204949
location: region:204578-204949:1
so has part: feature:204578-204949:1:exon
subclass of: SO_0000010

127566484
type: Gene
SIO_000068: ncbigene

position:204578:1
position: 204578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204949:1
position: 204949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204578-204949:1:exon

LOC127566484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566484
product: histone H2B 1/2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 Proteins
transcript id: XM_052008914.1
SIO_010081: LOC127566484
subclass of: SO_0000673
so part of: LOC127566484
location: 204578..204949
location: region:204578-204949:1
so has part: feature:204578-204949:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204578-204949:1:exon

LOC127566484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B 1/2-like
translation: MPEPAKVSKKGAKKALPKSAGKAAKKSKWARKKSYAIYIYKVMKQVHPDTGISSKAMSIMNSFVNDNFEQIAGEASRLAHYNKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC127566484
subclass of: SO_0000673
so part of: LOC127566484
location: 204578..204949
location: region:204578-204949:1
so has part: feature:204578-204949:1:exon

XP_051864874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204578-204949:1:exon

LOC127566472
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566472
note: histone H2A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 205826..206365
location: region:205826-206365:1
so has part: feature:205826-206365:1:exon

127566472
type: Gene
SIO_000068: ncbigene

position:205826:1
position: 205826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206365:1
position: 206365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205826-206365:1:exon

LOC127566472
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127566472
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 260 Proteins
pseudo: true
SIO_010081: LOC127566472
subclass of: SO_0000673
so part of: LOC127566472
location: 205826..206365
location: region:205826-206365:1
so has part: feature:205826-206365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205826-206365:1:exon

LOC127566483
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566483
note: histone H2B type 1-O-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(207393..207764)
location: region:207393-207764:-1
so has part: feature:207393-207764:-1:exon

127566483
type: Gene
SIO_000068: ncbigene

position:207393:-1
position: 207393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207764:-1
position: 207764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207393-207764:-1:exon

LOC127566483
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127566483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 226 Proteins
pseudo: true
SIO_010081: LOC127566483
subclass of: SO_0000673
so part of: LOC127566483
location: complement(207393..207764)
location: region:207393-207764:-1
so has part: feature:207393-207764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207393-207764:-1:exon

LOC127566473
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566473
note: histone H1.2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 235647..236258
location: region:235647-236258:1
so has part: feature:235647-236258:1:exon
subclass of: SO_0000010

127566473
type: Gene
SIO_000068: ncbigene

position:235647:1
position: 235647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236258:1
position: 236258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235647-236258:1:exon

LOC127566473
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566473
product: histone H1.2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052008904.1
SIO_010081: LOC127566473
subclass of: SO_0000673
so part of: LOC127566473
location: join(235647..236018,236063..236258)
location: region:235647-236258:1
so has part: feature:235647-236018:1:exon
so has part: feature:236063-236258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235647-236018:1:exon

position:236018:1
position: 236018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236063-236258:1:exon

position:236063:1
position: 236063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566473
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566473
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:236073..236075,aa:OTHER)
product: LOW QUALITY PROTEIN: histone H1.2-like
translation: MTETAATEAAPPAAPVAQTKAPKKKNAPARNKAAGPTLDQIVAGCSYKRGMSRVAIKKTLAARSVDVAKRGSQIRLYIKRKVKHGSLLQTRGVGFSGSFKASKDKTSVKLKKGKKPAAKKPKKRTKKXVARKPAAKKAAAKKPATKKTAPKKAKRPKKVAAPKGKVVKKSAKTKQKTAKPRKAAGKKK
SIO_010081: LOC127566473
subclass of: SO_0000673
so part of: LOC127566473
location: join(235647..236018,236063..236258)
location: region:235647-236258:1
so has part: feature:235647-236018:1:exon
so has part: feature:236063-236258:1:exon

XP_051864864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235647-236018:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236063-236258:1:exon

LOC127566485
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566485
note: histone H4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 237042..237355
location: region:237042-237355:1
so has part: feature:237042-237355:1:exon

127566485
type: Gene
SIO_000068: ncbigene

position:237042:1
position: 237042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237355:1
position: 237355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237042-237355:1:exon

LOC127566485
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127566485
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins
pseudo: true
SIO_010081: LOC127566485
subclass of: SO_0000673
so part of: LOC127566485
location: 237042..237355
location: region:237042-237355:1
so has part: feature:237042-237355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237042-237355:1:exon

LOC127566481
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566481
note: histone H3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 238230..238640
location: region:238230-238640:1
so has part: feature:238230-238640:1:exon

127566481
type: Gene
SIO_000068: ncbigene

position:238230:1
position: 238230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238640:1
position: 238640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238230-238640:1:exon

LOC127566481
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127566481
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 253 Proteins
pseudo: true
SIO_010081: LOC127566481
subclass of: SO_0000673
so part of: LOC127566481
location: 238230..238640
location: region:238230-238640:1
so has part: feature:238230-238640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238230-238640:1:exon

LOC127566482
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566482
note: late histone H2A.2.2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 239597..239971
location: region:239597-239971:1
so has part: feature:239597-239971:1:exon

127566482
type: Gene
SIO_000068: ncbigene

position:239597:1
position: 239597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239971:1
position: 239971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239597-239971:1:exon

LOC127566482
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127566482
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 245 Proteins
pseudo: true
SIO_010081: LOC127566482
subclass of: SO_0000673
so part of: LOC127566482
location: 239597..239971
location: region:239597-239971:1
so has part: feature:239597-239971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239597-239971:1:exon

LOC127566486
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566486
note: histone H4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240943..241248)
location: region:240943-241248:-1
so has part: feature:240943-241248:-1:exon
subclass of: SO_0000010

127566486
type: Gene
SIO_000068: ncbigene

position:240943:-1
position: 240943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241248:-1
position: 241248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240943-241248:-1:exon

LOC127566486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566486
product: histone H4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 299 Proteins
transcript id: XM_052008915.1
SIO_010081: LOC127566486
subclass of: SO_0000673
so part of: LOC127566486
location: complement(240943..241248)
location: region:240943-241248:-1
so has part: feature:240943-241248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240943-241248:-1:exon

LOC127566486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4-like
translation: MSGRGKGGKDGAKRHRKVLRDNIQGNTKPAIRRLARRGGVKRISRLIYEETHGVLKVFLENVIRDALTYTEHAKRKTVTAIDVVYALKHQGRTLYGFDG
SIO_010081: LOC127566486
subclass of: SO_0000673
so part of: LOC127566486
location: complement(240943..241242)
location: region:240943-241242:-1
so has part: feature:240943-241242:-1:exon

XP_051864875.1
type: Protein
SIO_000068: ncbiprotein

position:241242:-1
position: 241242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240943-241242:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 408178..408260
location: region:408178-408260:1
so has part: feature:408178-408260:1:exon
subclass of: SO_0000663

127566506
type: Gene
SIO_000068: ncbigene

position:408178:1
position: 408178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408260:1
position: 408260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408178-408260:1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:408212..408214,aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: 408178..408260
location: region:408178-408260:1
so has part: feature:408178-408260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408178-408260:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnan-guu
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 498300..498373
location: region:498300-498373:1
so has part: feature:498300-498373:1:exon
subclass of: SO_0000663

127566518
type: Gene
SIO_000068: ncbigene

position:498300:1
position: 498300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498373:1
position: 498373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498300-498373:1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:498334..498336,aa:Asn,seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: 498300..498373
location: region:498300-498373:1
so has part: feature:498300-498373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498300-498373:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 499115..499186
location: region:499115-499186:1
so has part: feature:499115-499186:1:exon
subclass of: SO_0000663

127566530
type: Gene
SIO_000068: ncbigene

position:499115:1
position: 499115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499186:1
position: 499186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499115-499186:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:499147..499149,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 499115..499186
location: region:499115-499186:1
so has part: feature:499115-499186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499115-499186:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(501477..501549)
location: region:501477-501549:-1
so has part: feature:501477-501549:-1:exon
subclass of: SO_0000663

127566525
type: Gene
SIO_000068: ncbigene

position:501477:-1
position: 501477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501549:-1
position: 501549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501477-501549:-1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(501513..501515),aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: complement(501477..501549)
location: region:501477-501549:-1
so has part: feature:501477-501549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501477-501549:-1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 671470..671541
location: region:671470-671541:1
so has part: feature:671470-671541:1:exon
subclass of: SO_0000663

127566541
type: Gene
SIO_000068: ncbigene

position:671470:1
position: 671470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671541:1
position: 671541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671470-671541:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:671502..671504,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 671470..671541
location: region:671470-671541:1
so has part: feature:671470-671541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671470-671541:1:exon

LOC127566505
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566505
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(706913..707071)
location: region:706913-707071:-1
so has part: feature:706913-707071:-1:exon
subclass of: SO_0000623

127566505
type: Gene
SIO_000068: ncbigene

position:706913:-1
position: 706913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707071:-1
position: 707071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706913-707071:-1:exon

LOC127566505
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: snRNA
gene: LOC127566505
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007955740.1
SIO_010081: LOC127566505
subclass of: SO_0000673
so part of: LOC127566505
location: complement(706913..707071)
location: region:706913-707071:-1
so has part: feature:706913-707071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706913-707071:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(708494..708565)
location: region:708494-708565:-1
so has part: feature:708494-708565:-1:exon
subclass of: SO_0000663

127566526
type: Gene
SIO_000068: ncbigene

position:708494:-1
position: 708494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708565:-1
position: 708565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708494-708565:-1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(708530..708532),aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: complement(708494..708565)
location: region:708494-708565:-1
so has part: feature:708494-708565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708494-708565:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnad-guc
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 709074..709145
location: region:709074-709145:1
so has part: feature:709074-709145:1:exon
subclass of: SO_0000663

127566544
type: Gene
SIO_000068: ncbigene

position:709074:1
position: 709074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709145:1
position: 709145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709074-709145:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:709107..709109,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 709074..709145
location: region:709074-709145:1
so has part: feature:709074-709145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709074-709145:1:exon

LOC127566474
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566474
note: probable G-protein coupled receptor 139; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833758..839672
location: region:833758-839672:1
so has part: feature:833758-839672:1:exon
subclass of: SO_0000010

127566474
type: Gene
SIO_000068: ncbigene

position:833758:1
position: 833758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839672:1
position: 839672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833758-839672:1:exon

LOC127566474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566474
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052008905.1
SIO_010081: LOC127566474
subclass of: SO_0000673
so part of: LOC127566474
location: join(833758..833811,835029..835156,836168..836244,836568..837434,839638..839672)
location: region:833758-839672:1
so has part: feature:833758-833811:1:exon
so has part: feature:835029-835156:1:exon
so has part: feature:836168-836244:1:exon
so has part: feature:836568-837434:1:exon
so has part: feature:839638-839672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833758-833811:1:exon

position:833811:1
position: 833811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835029-835156:1:exon

position:835029:1
position: 835029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835156:1
position: 835156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:836168-836244:1:exon

position:836168:1
position: 836168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836244:1
position: 836244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836568-837434:1:exon

position:836568:1
position: 836568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837434:1
position: 837434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:839638-839672:1:exon

position:839638:1
position: 839638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MYQGQGTLADEPYQDSAQSQHGYTHSIVEVAEGAERMQGDDSWNRLIQPKTFASFAPTPSIFLPVANPIKAIGTALDALRFEARNKFNFTAIVILSRGKCGLSKCITRYLEAMAAADLMLVVVAVIVEQINYIYLFANFLFVTPVCSVILVLRIAISDCSVWLTVVFTLDRYVAICCQKLRKRYCTETTATLVIVTVCAGSCARAIPFYFTVDPWRCVSSAEYLTSPVWRAYQLCDGIVTPVLQICLILLFNTLTVRHIIAANKVRQGLRNNSENQKNAEMDNCRKSIILLFALSANFILLWTPNVVHTMNWQAENYSYTDRYFNTPVYILQQFGYMLQFISTCTNTCFYGLTQRKFREELKNGVKYLFAINGRLLKFVSIVILDQ
SIO_010081: LOC127566474
subclass of: SO_0000673
so part of: LOC127566474
location: join(833758..833811,835029..835156,836168..836244,836568..837434,839638..839672)
location: region:833758-839672:1
so has part: feature:833758-833811:1:exon
so has part: feature:835029-835156:1:exon
so has part: feature:836168-836244:1:exon
so has part: feature:836568-837434:1:exon
so has part: feature:839638-839672:1:exon

XP_051864865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833758-833811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835029-835156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836168-836244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836568-837434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839638-839672:1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 988278..988359
location: region:988278-988359:1
so has part: feature:988278-988359:1:exon
subclass of: SO_0000663

127566508
type: Gene
SIO_000068: ncbigene

position:988278:1
position: 988278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988359:1
position: 988359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988278-988359:1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:988311..988313,aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: 988278..988359
location: region:988278-988359:1
so has part: feature:988278-988359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988278-988359:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnan-guu
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(996740..996813)
location: region:996740-996813:-1
so has part: feature:996740-996813:-1:exon
subclass of: SO_0000663

127566527
type: Gene
SIO_000068: ncbigene

position:996740:-1
position: 996740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996813:-1
position: 996813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996740-996813:-1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(996777..996779),aa:Asn,seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: complement(996740..996813)
location: region:996740-996813:-1
so has part: feature:996740-996813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996740-996813:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(997041..997122)
location: region:997041-997122:-1
so has part: feature:997041-997122:-1:exon
subclass of: SO_0000663

127566528
type: Gene
SIO_000068: ncbigene

position:997041:-1
position: 997041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997122:-1
position: 997122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997041-997122:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(997087..997089),aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(997041..997122)
location: region:997041-997122:-1
so has part: feature:997041-997122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997041-997122:-1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1089206..1089277
location: region:1089206-1089277:1
so has part: feature:1089206-1089277:1:exon
subclass of: SO_0000663

127566509
type: Gene
SIO_000068: ncbigene

position:1089206:1
position: 1089206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089277:1
position: 1089277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089206-1089277:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1089238..1089240,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 1089206..1089277
location: region:1089206-1089277:1
so has part: feature:1089206-1089277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089206-1089277:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1183445..1183516
location: region:1183445-1183516:1
so has part: feature:1183445-1183516:1:exon
subclass of: SO_0000663

127566510
type: Gene
SIO_000068: ncbigene

position:1183445:1
position: 1183445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183516:1
position: 1183516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183445-1183516:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1183477..1183479,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 1183445..1183516
location: region:1183445-1183516:1
so has part: feature:1183445-1183516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183445-1183516:1:exon

LOC127566502
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566502
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1184110..1184270)
location: region:1184110-1184270:-1
so has part: feature:1184110-1184270:-1:exon
subclass of: SO_0000623

127566502
type: Gene
SIO_000068: ncbigene

position:1184110:-1
position: 1184110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184270:-1
position: 1184270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184110-1184270:-1:exon

LOC127566502
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: snRNA
gene: LOC127566502
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007955737.1
SIO_010081: LOC127566502
subclass of: SO_0000673
so part of: LOC127566502
location: complement(1184110..1184270)
location: region:1184110-1184270:-1
so has part: feature:1184110-1184270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184110-1184270:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1185812..1185883)
location: region:1185812-1185883:-1
so has part: feature:1185812-1185883:-1:exon
subclass of: SO_0000663

127566529
type: Gene
SIO_000068: ncbigene

position:1185812:-1
position: 1185812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185883:-1
position: 1185883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185812-1185883:-1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1185848..1185850),aa:Gly, seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: complement(1185812..1185883)
location: region:1185812-1185883:-1
so has part: feature:1185812-1185883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185812-1185883:-1:exon

LOC127566475
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566475
note: probable G-protein coupled receptor 139; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1254377..1256445)
location: region:1254377-1256445:-1
so has part: feature:1254377-1256445:-1:exon
subclass of: SO_0000010

127566475
type: Gene
SIO_000068: ncbigene

position:1254377:-1
position: 1254377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256445:-1
position: 1256445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254377-1256445:-1:exon

LOC127566475
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566475
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052008906.1
SIO_010081: LOC127566475
subclass of: SO_0000673
so part of: LOC127566475
location: complement(join(1254377..1255305,1256376..1256445))
location: region:1254377-1256445:-1
so has part: feature:1256376-1256445:-1:exon
so has part: feature:1254377-1255305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256376-1256445:-1:exon

position:1256376:-1
position: 1256376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1254377-1255305:-1:exon

position:1255305:-1
position: 1255305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MYLPPILQMVHICYPILAVFGLPANVLTIIILSRGNCGLSKCIGAYMMIMAVSDLSVIIINVVLYETLIYRLSHTFLHRTNLLLAIVYLMIVSLELSQWYTVAFTVDRYVTMCCQKFKTKYCRVKTVKILAAVILILLSLEHIPYLFVFQPLRIIGNTSWGIEFRLEAFYSPAYVAFTRLKSFQSLFCVFGLMFLFNGLTVRHILVSSKSRRGFQNQMNENRRDKKMESRRNSIILLFSVSGSFMLLWLPAIVTNFIAGQAMYSDRDYTSPAYIAAQTGALLAHLSSCTNTYIYAATQTKFREELKTLLMSPWTFVLALAKKRAPWNQSFLS
SIO_010081: LOC127566475
subclass of: SO_0000673
so part of: LOC127566475
location: complement(join(1254377..1255305,1256376..1256445))
location: region:1254377-1256445:-1
so has part: feature:1256376-1256445:-1:exon
so has part: feature:1254377-1255305:-1:exon

XP_051864866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1256376-1256445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254377-1255305:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1313876..1313957
location: region:1313876-1313957:1
so has part: feature:1313876-1313957:1:exon
subclass of: SO_0000663

127566511
type: Gene
SIO_000068: ncbigene

position:1313876:1
position: 1313876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313957:1
position: 1313957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313876-1313957:1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1313909..1313911,aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: 1313876..1313957
location: region:1313876-1313957:1
so has part: feature:1313876-1313957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1313876-1313957:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnan-guu
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1314185..1314257
location: region:1314185-1314257:1
so has part: feature:1314185-1314257:1:exon
subclass of: SO_0000663

127566512
type: Gene
SIO_000068: ncbigene

position:1314185:1
position: 1314185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314257:1
position: 1314257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314185-1314257:1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1314218..1314220,aa:Asn,seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: 1314185..1314257
location: region:1314185-1314257:1
so has part: feature:1314185-1314257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1314185-1314257:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnad-guc
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1318146..1318217)
location: region:1318146-1318217:-1
so has part: feature:1318146-1318217:-1:exon
subclass of: SO_0000663

127566531
type: Gene
SIO_000068: ncbigene

position:1318146:-1
position: 1318146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318217:-1
position: 1318217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318146-1318217:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1318182..1318184),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1318146..1318217)
location: region:1318146-1318217:-1
so has part: feature:1318146-1318217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318146-1318217:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1322695..1322776)
location: region:1322695-1322776:-1
so has part: feature:1322695-1322776:-1:exon
subclass of: SO_0000663

127566532
type: Gene
SIO_000068: ncbigene

position:1322695:-1
position: 1322695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322776:-1
position: 1322776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322695-1322776:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1322741..1322743),aa:Ser, seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(1322695..1322776)
location: region:1322695-1322776:-1
so has part: feature:1322695-1322776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1322695-1322776:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1622028..1622099
location: region:1622028-1622099:1
so has part: feature:1622028-1622099:1:exon
subclass of: SO_0000663

127566513
type: Gene
SIO_000068: ncbigene

position:1622028:1
position: 1622028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622099:1
position: 1622099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622028-1622099:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1622061..1622063,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 1622028..1622099
location: region:1622028-1622099:1
so has part: feature:1622028-1622099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1622028-1622099:1:exon

LOC127566504
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566504
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1623608..1623767
location: region:1623608-1623767:1
so has part: feature:1623608-1623767:1:exon
subclass of: SO_0000623

127566504
type: Gene
SIO_000068: ncbigene

position:1623608:1
position: 1623608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623767:1
position: 1623767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623608-1623767:1:exon

LOC127566504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: snRNA
gene: LOC127566504
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007955739.1
SIO_010081: LOC127566504
subclass of: SO_0000673
so part of: LOC127566504
location: 1623608..1623767
location: region:1623608-1623767:1
so has part: feature:1623608-1623767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1623608-1623767:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1624361..1624432)
location: region:1624361-1624432:-1
so has part: feature:1624361-1624432:-1:exon
subclass of: SO_0000663

127566533
type: Gene
SIO_000068: ncbigene

position:1624361:-1
position: 1624361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624432:-1
position: 1624432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624361-1624432:-1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1624398..1624400),aa:Ala, seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: complement(1624361..1624432)
location: region:1624361-1624432:-1
so has part: feature:1624361-1624432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1624361-1624432:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1756823..1756894
location: region:1756823-1756894:1
so has part: feature:1756823-1756894:1:exon
subclass of: SO_0000663

127566514
type: Gene
SIO_000068: ncbigene

position:1756823:1
position: 1756823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756894:1
position: 1756894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756823-1756894:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1756856..1756858,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 1756823..1756894
location: region:1756823-1756894:1
so has part: feature:1756823-1756894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1756823-1756894:1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1760716..1760797)
location: region:1760716-1760797:-1
so has part: feature:1760716-1760797:-1:exon
subclass of: SO_0000663

127566534
type: Gene
SIO_000068: ncbigene

position:1760716:-1
position: 1760716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760797:-1
position: 1760797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1760716-1760797:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1760762..1760764),aa:Ser, seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(1760716..1760797)
location: region:1760716-1760797:-1
so has part: feature:1760716-1760797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1760716-1760797:-1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1884344..1884415
location: region:1884344-1884415:1
so has part: feature:1884344-1884415:1:exon
subclass of: SO_0000663

127566515
type: Gene
SIO_000068: ncbigene

position:1884344:1
position: 1884344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884415:1
position: 1884415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884344-1884415:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1884376..1884378,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 1884344..1884415
location: region:1884344-1884415:1
so has part: feature:1884344-1884415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1884344-1884415:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1886709..1886780)
location: region:1886709-1886780:-1
so has part: feature:1886709-1886780:-1:exon
subclass of: SO_0000663

127566535
type: Gene
SIO_000068: ncbigene

position:1886709:-1
position: 1886709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886780:-1
position: 1886780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886709-1886780:-1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1886745..1886747),aa:Gly, seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: complement(1886709..1886780)
location: region:1886709-1886780:-1
so has part: feature:1886709-1886780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1886709-1886780:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2011848..2011919
location: region:2011848-2011919:1
so has part: feature:2011848-2011919:1:exon
subclass of: SO_0000663

127566516
type: Gene
SIO_000068: ncbigene

position:2011848:1
position: 2011848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011919:1
position: 2011919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2011848-2011919:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2011881..2011883,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 2011848..2011919
location: region:2011848-2011919:1
so has part: feature:2011848-2011919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2011848-2011919:1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2015829..2015910)
location: region:2015829-2015910:-1
so has part: feature:2015829-2015910:-1:exon
subclass of: SO_0000663

127566536
type: Gene
SIO_000068: ncbigene

position:2015829:-1
position: 2015829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2015910:-1
position: 2015910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2015829-2015910:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2015875..2015877),aa:Ser, seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(2015829..2015910)
location: region:2015829-2015910:-1
so has part: feature:2015829-2015910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2015829-2015910:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2370655..2370726
location: region:2370655-2370726:1
so has part: feature:2370655-2370726:1:exon
subclass of: SO_0000663

127566517
type: Gene
SIO_000068: ncbigene

position:2370655:1
position: 2370655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2370726:1
position: 2370726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370655-2370726:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2370688..2370690,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 2370655..2370726
location: region:2370655-2370726:1
so has part: feature:2370655-2370726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2370655-2370726:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2373012..2373083)
location: region:2373012-2373083:-1
so has part: feature:2373012-2373083:-1:exon
subclass of: SO_0000663

127566537
type: Gene
SIO_000068: ncbigene

position:2373012:-1
position: 2373012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373083:-1
position: 2373083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2373012-2373083:-1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2373049..2373051),aa:Ala, seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: complement(2373012..2373083)
location: region:2373012-2373083:-1
so has part: feature:2373012-2373083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2373012-2373083:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnad-guc
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2494325..2494396)
location: region:2494325-2494396:-1
so has part: feature:2494325-2494396:-1:exon
subclass of: SO_0000663

127566538
type: Gene
SIO_000068: ncbigene

position:2494325:-1
position: 2494325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494396:-1
position: 2494396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494325-2494396:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2494361..2494363),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(2494325..2494396)
location: region:2494325-2494396:-1
so has part: feature:2494325-2494396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494325-2494396:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2494914..2494985
location: region:2494914-2494985:1
so has part: feature:2494914-2494985:1:exon
subclass of: SO_0000663

127566519
type: Gene
SIO_000068: ncbigene

position:2494914:1
position: 2494914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494985:1
position: 2494985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494914-2494985:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2494947..2494949,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 2494914..2494985
location: region:2494914-2494985:1
so has part: feature:2494914-2494985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494914-2494985:1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2498821..2498902)
location: region:2498821-2498902:-1
so has part: feature:2498821-2498902:-1:exon
subclass of: SO_0000663

127566539
type: Gene
SIO_000068: ncbigene

position:2498821:-1
position: 2498821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498902:-1
position: 2498902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2498821-2498902:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2498867..2498869),aa:Ser, seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(2498821..2498902)
location: region:2498821-2498902:-1
so has part: feature:2498821-2498902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2498821-2498902:-1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-ucc
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2724869..2724940
location: region:2724869-2724940:1
so has part: feature:2724869-2724940:1:exon
subclass of: SO_0000663

127566520
type: Gene
SIO_000068: ncbigene

position:2724869:1
position: 2724869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724940:1
position: 2724940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2724869-2724940:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2724902..2724904,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 2724869..2724940
location: region:2724869-2724940:1
so has part: feature:2724869-2724940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2724869-2724940:1:exon

LOC127566503
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566503
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2726482..2726642
location: region:2726482-2726642:1
so has part: feature:2726482-2726642:1:exon
subclass of: SO_0000623

127566503
type: Gene
SIO_000068: ncbigene

position:2726482:1
position: 2726482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726642:1
position: 2726642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2726482-2726642:1:exon

LOC127566503
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: snRNA
gene: LOC127566503
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007955738.1
SIO_010081: LOC127566503
subclass of: SO_0000673
so part of: LOC127566503
location: 2726482..2726642
location: region:2726482-2726642:1
so has part: feature:2726482-2726642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2726482-2726642:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaa-ugc
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2727236..2727307)
location: region:2727236-2727307:-1
so has part: feature:2727236-2727307:-1:exon
subclass of: SO_0000663

127566540
type: Gene
SIO_000068: ncbigene

position:2727236:-1
position: 2727236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727307:-1
position: 2727307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727236-2727307:-1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2727273..2727275),aa:Ala, seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: complement(2727236..2727307)
location: region:2727236-2727307:-1
so has part: feature:2727236-2727307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2727236-2727307:-1:exon

LOC127566476
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566476
note: vasopressin V2 receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2865774..2866634)
location: region:2865774-2866634:-1
so has part: feature:2865774-2866634:-1:exon
subclass of: SO_0000010

127566476
type: Gene
SIO_000068: ncbigene

position:2865774:-1
position: 2865774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866634:-1
position: 2866634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2865774-2866634:-1:exon

LOC127566476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566476
product: vasopressin V2 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_052008907.1
SIO_010081: LOC127566476
subclass of: SO_0000673
so part of: LOC127566476
location: complement(2865774..2866634)
location: region:2865774-2866634:-1
so has part: feature:2865774-2866634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2865774-2866634:-1:exon

LOC127566476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasopressin V2 receptor-like
translation: MMIMAVSDLSVIIINVVLYEILIYRLSHTFLHRTNFLLAIVYLMIVSLELSQWYTVAFTVDRYVTMCCQKFKTKYCRVKTVRILAAVILILLSLEHIPYLFVFQPLRIIGNTSWGIEFRLEAFNSPAYVAFTRLKSFQSLFCVFGLMFLFNGLTVRHILVSSKSRRGFQNQMNENRRDKKMESRRNSIILLFSVSGSFMLLWLPAIVTNFIAGLAMYSDRDYTSPAYIAAQTGALLAHLSSCTNTYIYAATQTKFREELKTLLMSPWTFVLALAKKRAHWNQSFLS
SIO_010081: LOC127566476
subclass of: SO_0000673
so part of: LOC127566476
location: complement(2865774..2866634)
location: region:2865774-2866634:-1
so has part: feature:2865774-2866634:-1:exon

XP_051864867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2865774-2866634:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3406790..3406871
location: region:3406790-3406871:1
so has part: feature:3406790-3406871:1:exon
subclass of: SO_0000663

127566521
type: Gene
SIO_000068: ncbigene

position:3406790:1
position: 3406790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3406871:1
position: 3406871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3406790-3406871:1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3406823..3406825,aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: 3406790..3406871
location: region:3406790-3406871:1
so has part: feature:3406790-3406871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3406790-3406871:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnan-guu
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3407099..3407171
location: region:3407099-3407171:1
so has part: feature:3407099-3407171:1:exon
subclass of: SO_0000663

127566522
type: Gene
SIO_000068: ncbigene

position:3407099:1
position: 3407099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3407171:1
position: 3407171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3407099-3407171:1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3407132..3407134,aa:Asn,seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: 3407099..3407171
location: region:3407099-3407171:1
so has part: feature:3407099-3407171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3407099-3407171:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnad-guc
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3411379..3411450
location: region:3411379-3411450:1
so has part: feature:3411379-3411450:1:exon
subclass of: SO_0000663

127566524
type: Gene
SIO_000068: ncbigene

position:3411379:1
position: 3411379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3411450:1
position: 3411450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3411379-3411450:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3411412..3411414,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 3411379..3411450
location: region:3411379-3411450:1
so has part: feature:3411379-3411450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3411379-3411450:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnan-guu
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3415337..3415410)
location: region:3415337-3415410:-1
so has part: feature:3415337-3415410:-1:exon
subclass of: SO_0000663

127566542
type: Gene
SIO_000068: ncbigene

position:3415337:-1
position: 3415337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415410:-1
position: 3415410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415337-3415410:-1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3415374..3415376),aa:Asn, seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: complement(3415337..3415410)
location: region:3415337-3415410:-1
so has part: feature:3415337-3415410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3415337-3415410:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-aga
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3415638..3415719)
location: region:3415638-3415719:-1
so has part: feature:3415638-3415719:-1:exon
subclass of: SO_0000663

127566543
type: Gene
SIO_000068: ncbigene

position:3415638:-1
position: 3415638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415719:-1
position: 3415719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415638-3415719:-1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3415684..3415686),aa:Ser, seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: complement(3415638..3415719)
location: region:3415638-3415719:-1
so has part: feature:3415638-3415719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3415638-3415719:-1:exon

LOC127566477
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566477
note: C3a anaphylatoxin chemotactic receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3595441..3599152
location: region:3595441-3599152:1
so has part: feature:3595441-3599152:1:exon
subclass of: SO_0000010

127566477
type: Gene
SIO_000068: ncbigene

position:3595441:1
position: 3595441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3599152:1
position: 3599152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3595441-3599152:1:exon

LOC127566477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566477
product: C3a anaphylatoxin chemotactic receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_052008909.1
SIO_010081: LOC127566477
subclass of: SO_0000673
so part of: LOC127566477
location: join(3595441..3595552,3596282..3596326,3598222..3599152)
location: region:3595441-3599152:1
so has part: feature:3595441-3595552:1:exon
so has part: feature:3596282-3596326:1:exon
so has part: feature:3598222-3599152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3595441-3595552:1:exon

position:3595552:1
position: 3595552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3596282-3596326:1:exon

position:3596282:1
position: 3596282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596326:1
position: 3596326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3598222-3599152:1:exon

position:3598222:1
position: 3598222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C3a anaphylatoxin chemotactic receptor-like
translation: MSLSDDLSKSTLGGNFSFNASTSEDSTITWTAPSILAMIIHVLTFLLGVPGNGAVIWVTGFKMKRNINTVCFLNLAVADLTYCLSLPFQMANVKLQVSWDKNFVLWIFFQSAIILNMSASVFLLTLISFCRYLAVTRPTWFRHHLSLSWVRAACFGAWGLAFVMCLPTMLVKQIVPYFQDKTWAVLQITWVVFIFILPIVIMTACYLLICGELHGKKLAKSNKHVRLTMTVVAVFIISWFPYQACGLVRAFSNPPALIWCKIAFSLSSFNSALNPLLYVFTGRNFRQVFRRSLAASLRLAFAEEDQT
SIO_010081: LOC127566477
subclass of: SO_0000673
so part of: LOC127566477
location: 3598229..3599152
location: region:3598229-3599152:1
so has part: feature:3598229-3599152:1:exon

XP_051864869.1
type: Protein
SIO_000068: ncbiprotein

position:3598229:1
position: 3598229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598229-3599152:1:exon

LOC127566499
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566499
note: C3a anaphylatoxin chemotactic receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3609923..3633933)
location: region:3609923-3633933:-1
so has part: feature:3609923-3633933:-1:exon
subclass of: SO_0000010

127566499
type: Gene
SIO_000068: ncbigene

position:3609923:-1
position: 3609923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3633933:-1
position: 3633933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3609923-3633933:-1:exon

LOC127566499
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566499
product: C3a anaphylatoxin chemotactic receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_052008936.1
SIO_010081: LOC127566499
subclass of: SO_0000673
so part of: LOC127566499
location: complement(join(3609923..3611687,3633695..3633933))
location: region:3609923-3633933:-1
so has part: feature:3633695-3633933:-1:exon
so has part: feature:3609923-3611687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3633695-3633933:-1:exon

position:3633695:-1
position: 3633695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3609923-3611687:-1:exon

position:3611687:-1
position: 3611687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566499
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C3a anaphylatoxin chemotactic receptor-like
translation: MSPYEENFEDLYDDTLNYSDGMNSSADYSPEEPEIEQIMSVTLSLIIYALAFLLGVPGNVAVIWVTGFKMKRSVNTVCFLNLAVADLTYCLILPFQMANVALRHVWPTDDVLCKLIPTTTVLNMSASVFLLTLISIDRCLAVTRPIWSQTHRSLPWVRAACFGVWGLAFLMCLPTLLIRKVVTHPDLGLSFCYVNYSGTYFGERTKAVVEITRSLLAFALPFLIMAFCYLLIGCKLQRSKFAKSKKTIRLIAVVVGAFFVCWLPYHACGLAQAFTSSPAALVWDSVAVGLGSLNSALNPLLYMFAGRNFRQVFRRSLTASLLLAFTEEPTDSVCTTRVKTACSVEDSV
SIO_010081: LOC127566499
subclass of: SO_0000673
so part of: LOC127566499
location: complement(3610634..3611680)
location: region:3610634-3611680:-1
so has part: feature:3610634-3611680:-1:exon

XP_051864896.1
type: Protein
SIO_000068: ncbiprotein

position:3610634:-1
position: 3610634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3611680:-1
position: 3611680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610634-3611680:-1:exon

LOC127566478
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566478
note: taste receptor type 2 member 143; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3658922..3659920
location: region:3658922-3659920:1
so has part: feature:3658922-3659920:1:exon
subclass of: SO_0000010

127566478
type: Gene
SIO_000068: ncbigene

position:3658922:1
position: 3658922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3659920:1
position: 3659920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3658922-3659920:1:exon

LOC127566478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566478
product: taste receptor type 2 member 143
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_052008910.1
SIO_010081: LOC127566478
subclass of: SO_0000673
so part of: LOC127566478
location: 3658922..3659920
location: region:3658922-3659920:1
so has part: feature:3658922-3659920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3658922-3659920:1:exon

LOC127566478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 2 member 143
translation: MGWLMEATTVGFFAIFGLIANVFILLTLLPELRQCNAPPADVIVAGLALANMITIAVAILRMAVDFIHIFCELQQKIAESFLTLSHSLSFWISALLCFFYCLKIVSVHRPNAKKLAQIIGRNSRLWIAATALLSCALGALDCYMTNAALTCQYHNGSYHFHSTNGSNTWNRETIEELDMYMNLILGTAFPTVWMSTSCICLITALLQNRRFSLKLTSNVKQHKDHHMRIIAMVICLYLLFLFILFARIIFLFCVISQTSLCSFMMEELFDFTYLYDAFSYAVLNPVIIVCGVCKLRDKMSRFCCRRVTCPQTEGAGPPFVVGSFAGGRGGKP
SIO_010081: LOC127566478
subclass of: SO_0000673
so part of: LOC127566478
location: 3658922..3659920
location: region:3658922-3659920:1
so has part: feature:3658922-3659920:1:exon

XP_051864870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3658922-3659920:1:exon

LOC127566479
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566479
note: C-C chemokine receptor type 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3694377..3695342
location: region:3694377-3695342:1
so has part: feature:3694377-3695342:1:exon
subclass of: SO_0000010

127566479
type: Gene
SIO_000068: ncbigene

position:3694377:1
position: 3694377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695342:1
position: 3695342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3694377-3695342:1:exon

LOC127566479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566479
product: C-C chemokine receptor type 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052008911.1
SIO_010081: LOC127566479
subclass of: SO_0000673
so part of: LOC127566479
location: 3694377..3695342
location: region:3694377-3695342:1
so has part: feature:3694377-3695342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3694377-3695342:1:exon

LOC127566479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 1-like
translation: MSADCMSEVPDLFSFLFTVNLLAIVILSRGKCGLSACTSRYLVAMAAADLLSLIVTVILWRIVVYYFPGTLLEVTPVCSAIGVFFCAVTDCSVWFTVAFSFDRFVAICCNKLKAKYCTVNTATATLATTCALFCIKNVPVYFTLEPEEIIDNIPWRCPRKPGYYTDPGWVAFDWLDKGSTPLFPFALILLLNALTVRHILVASQIRKKLRGQRTEENRSDPEMESRRKSVILLFAVSGNFILLWLPYVINFLYYSIAQVNPDNDTDSTFVFQQVSFMLLTLSCCTNTFIYAATQSKFREQLTNAIKYPVISIGHFIIPRDL
SIO_010081: LOC127566479
subclass of: SO_0000673
so part of: LOC127566479
location: 3694377..3695342
location: region:3694377-3695342:1
so has part: feature:3694377-3695342:1:exon

XP_051864871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3694377-3695342:1:exon

LOC127566488
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566488
note: uncharacterized LOC127566488; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3863069..3870871)
location: region:3863069-3870871:-1
so has part: feature:3863069-3870871:-1:exon
subclass of: SO_0000011

127566488
type: Gene
SIO_000068: ncbigene

position:3863069:-1
position: 3863069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3870871:-1
position: 3870871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863069-3870871:-1:exon

LOC127566488
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: lncRNA
gene: LOC127566488
product: uncharacterized LOC127566488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007955736.1
SIO_010081: LOC127566488
subclass of: SO_0000673
so part of: LOC127566488
location: complement(join(3863069..3864101,3866281..3866386,3870738..3870871))
location: region:3863069-3870871:-1
so has part: feature:3870738-3870871:-1:exon
so has part: feature:3866281-3866386:-1:exon
so has part: feature:3863069-3864101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3870738-3870871:-1:exon

position:3870738:-1
position: 3870738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3866281-3866386:-1:exon

position:3866281:-1
position: 3866281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3866386:-1
position: 3866386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3863069-3864101:-1:exon

position:3864101:-1
position: 3864101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566480
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566480
note: sialoadhesin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3870959..3903726)
location: region:3870959-3903726:-1
so has part: feature:3870959-3903726:-1:exon
subclass of: SO_0000010

127566480
type: Gene
SIO_000068: ncbigene

position:3870959:-1
position: 3870959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3903726:-1
position: 3903726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870959-3903726:-1:exon

LOC127566480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566480
product: sialoadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_052008912.1
SIO_010081: LOC127566480
subclass of: SO_0000673
so part of: LOC127566480
location: complement(join(3870959..3871035,3874849..3875160,3877615..3877875,3879426..3879716,3885641..3885994,3887753..3887834,3894966..3895093,3903553..3903726))
location: region:3870959-3903726:-1
so has part: feature:3903553-3903726:-1:exon
so has part: feature:3894966-3895093:-1:exon
so has part: feature:3887753-3887834:-1:exon
so has part: feature:3885641-3885994:-1:exon
so has part: feature:3879426-3879716:-1:exon
so has part: feature:3877615-3877875:-1:exon
so has part: feature:3874849-3875160:-1:exon
so has part: feature:3870959-3871035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3903553-3903726:-1:exon

position:3903553:-1
position: 3903553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3894966-3895093:-1:exon

position:3894966:-1
position: 3894966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895093:-1
position: 3895093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3887753-3887834:-1:exon

position:3887753:-1
position: 3887753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887834:-1
position: 3887834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3885641-3885994:-1:exon

position:3885641:-1
position: 3885641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885994:-1
position: 3885994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3879426-3879716:-1:exon

position:3879426:-1
position: 3879426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3879716:-1
position: 3879716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3877615-3877875:-1:exon

position:3877615:-1
position: 3877615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3877875:-1
position: 3877875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3874849-3875160:-1:exon

position:3874849:-1
position: 3874849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3875160:-1
position: 3875160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3870959-3871035:-1:exon

position:3871035:-1
position: 3871035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialoadhesin-like
translation: MIRKSVFLLSLLQGVLSEWSLRALPQRAISRSCVVIPCTFDFPSHPHTAIHGAWFKYWYYWKYTVYYSKDPNYAMSNFKGRAKIIGNLGKKDCSLRIDNVRPEDSDVYYFYVELDGFTTHSYTSPIQLQVLEVPDRPEILLPGNLTEGTPVTIVCKAIYTCPENRPSLTWSELPNSTVNVFAENSSGEISSVLAFTPSFVHHSGTVRCTVDYSGTSHRLENSVTLNVTYSPKKTVVQWTLNKDNGISLSCSSEANPNVTHFSWFKTSGGAETELRQYGDTITVACGSEEEAVSFYCRATNAVGSSRSPSVRIPNQREAAILPSSQCTRYPTNVTCHCMVQSCFPVNVSWGFLGRTVQNSETEGGYLTQCVRAGILVTNTLTIRGDNLTLETVSCSVANPRGLPPSQMKLEVVADDGQGHGASSPVEEPAAEVARYTCAPQVVVL
SIO_010081: LOC127566480
subclass of: SO_0000673
so part of: LOC127566480
location: complement(join(3870959..3871035,3874849..3875160,3877615..3877875,3879426..3879716,3885641..3885994,3887753..3887792))
location: region:3870959-3887792:-1
so has part: feature:3887753-3887792:-1:exon
so has part: feature:3885641-3885994:-1:exon
so has part: feature:3879426-3879716:-1:exon
so has part: feature:3877615-3877875:-1:exon
so has part: feature:3874849-3875160:-1:exon
so has part: feature:3870959-3871035:-1:exon

XP_051864872.1
type: Protein
SIO_000068: ncbiprotein

position:3887792:-1
position: 3887792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3887753-3887792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3885641-3885994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3879426-3879716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877615-3877875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3874849-3875160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3870959-3871035:-1:exon

ufc1
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: ufc1
note: ubiquitin-fold modifier conjugating enzyme 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3974056..3976493)
location: region:3974056-3976493:-1
so has part: feature:3974056-3976493:-1:exon
subclass of: SO_0000010

127566487
type: Gene
SIO_000068: ncbigene

position:3974056:-1
position: 3974056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3976493:-1
position: 3976493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974056-3976493:-1:exon

ufc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ufc1
product: ubiquitin-fold modifier conjugating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_052008916.1
SIO_010081: ufc1
subclass of: SO_0000673
so part of: ufc1
location: complement(join(3974056..3974967,3976328..3976493))
location: region:3974056-3976493:-1
so has part: feature:3976328-3976493:-1:exon
so has part: feature:3974056-3974967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3976328-3976493:-1:exon

position:3976328:-1
position: 3976328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3974056-3974967:-1:exon

position:3974967:-1
position: 3974967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ufc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ufc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-fold modifier-conjugating enzyme 1
translation: MRPPHPRRRLMADEATRRALSGIPLLRSGAGPRDGERWRQRLKEEFQALIQYVENNKQADNDWFRLESNKDGTR
SIO_010081: ufc1
subclass of: SO_0000673
so part of: ufc1
location: complement(join(3974896..3974967,3976328..3976480))
location: region:3974896-3976480:-1
so has part: feature:3976328-3976480:-1:exon
so has part: feature:3974896-3974967:-1:exon

XP_051864876.1
type: Protein
SIO_000068: ncbiprotein

position:3974896:-1
position: 3974896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3976480:-1
position: 3976480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3976328-3976480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3974896-3974967:-1:exon

LOC127566495
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566495
note: tubulin alpha-1A chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3998958..4001282)
location: region:3998958-4001282:-1
so has part: feature:3998958-4001282:-1:exon
subclass of: SO_0000010

127566495
type: Gene
SIO_000068: ncbigene

position:3998958:-1
position: 3998958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001282:-1
position: 4001282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3998958-4001282:-1:exon

LOC127566495
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566495
product: tubulin alpha-1A chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008930.1
SIO_010081: LOC127566495
subclass of: SO_0000673
so part of: LOC127566495
location: complement(join(3998958..3999342,3999973..4000653,4000800..4000948,4001048..4001282))
location: region:3998958-4001282:-1
so has part: feature:4001048-4001282:-1:exon
so has part: feature:4000800-4000948:-1:exon
so has part: feature:3999973-4000653:-1:exon
so has part: feature:3998958-3999342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4001048-4001282:-1:exon

position:4001048:-1
position: 4001048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4000800-4000948:-1:exon

position:4000800:-1
position: 4000800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4000948:-1
position: 4000948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3999973-4000653:-1:exon

position:3999973:-1
position: 3999973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4000653:-1
position: 4000653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3998958-3999342:-1:exon

position:3999342:-1
position: 3999342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain-like
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMLDNEAIYDVCRRNLDIERPTYTNLNRLLGQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPLISAERAYHEQLSVAEITNACFEPANQMLKCDPRQGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAVAMAWTRMNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDLASLEKDYEEVGVDSADLDKRAEEEE
SIO_010081: LOC127566495
subclass of: SO_0000673
so part of: LOC127566495
location: complement(join(3999046..3999342,3999973..4000653,4000800..4000948,4001048..4001168))
location: region:3999046-4001168:-1
so has part: feature:4001048-4001168:-1:exon
so has part: feature:4000800-4000948:-1:exon
so has part: feature:3999973-4000653:-1:exon
so has part: feature:3999046-3999342:-1:exon

XP_051864890.1
type: Protein
SIO_000068: ncbiprotein

position:3999046:-1
position: 3999046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001168:-1
position: 4001168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001048-4001168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4000800-4000948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3999973-4000653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3999046-3999342:-1:exon

LOC127566498
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566498
note: tubulin alpha-1C chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4013832..4016320
location: region:4013832-4016320:1
so has part: feature:4013832-4016320:1:exon
subclass of: SO_0000010

127566498
type: Gene
SIO_000068: ncbigene

position:4013832:1
position: 4013832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4016320:1
position: 4016320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4013832-4016320:1:exon

LOC127566498
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566498
product: tubulin alpha-1C chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 577 Proteins
transcript id: XM_052008934.1
SIO_010081: LOC127566498
subclass of: SO_0000673
so part of: LOC127566498
location: join(4013832..4014057,4014158..4014306,4014688..4015368,4016024..4016320)
location: region:4013832-4016320:1
so has part: feature:4013832-4014057:1:exon
so has part: feature:4014158-4014306:1:exon
so has part: feature:4014688-4015368:1:exon
so has part: feature:4016024-4016320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4013832-4014057:1:exon

position:4014057:1
position: 4014057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4014158-4014306:1:exon

position:4014158:1
position: 4014158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014306:1
position: 4014306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4014688-4015368:1:exon

position:4014688:1
position: 4014688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4015368:1
position: 4015368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4016024-4016320:1:exon

position:4016024:1
position: 4016024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566498
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1C chain-like
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMVDNEAIYDVCRRNLDIERPTYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPLISAERAYHEQLSVAEITNACFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNASIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISMAWTRLNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYQEVAVDSAELDRKGEEEE
SIO_010081: LOC127566498
subclass of: SO_0000673
so part of: LOC127566498
location: join(4013937..4014057,4014158..4014306,4014688..4015368,4016024..4016320)
location: region:4013937-4016320:1
so has part: feature:4013937-4014057:1:exon
so has part: feature:4014158-4014306:1:exon
so has part: feature:4014688-4015368:1:exon
so has part: feature:4016024-4016320:1:exon

XP_051864894.1
type: Protein
SIO_000068: ncbiprotein

position:4013937:1
position: 4013937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4013937-4014057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4014158-4014306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4014688-4015368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4016024-4016320:1:exon

LOC127566496
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566496
note: tubulin alpha-1C chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4022895..4025400)
location: region:4022895-4025400:-1
so has part: feature:4022895-4025400:-1:exon
subclass of: SO_0000010

127566496
type: Gene
SIO_000068: ncbigene

position:4022895:-1
position: 4022895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025400:-1
position: 4025400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4022895-4025400:-1:exon

LOC127566496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566496
product: tubulin alpha-1C chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 579 Proteins
transcript id: XM_052008931.1
SIO_010081: LOC127566496
subclass of: SO_0000673
so part of: LOC127566496
location: complement(join(4022895..4023208,4023864..4024544,4024926..4025074,4025175..4025400))
location: region:4022895-4025400:-1
so has part: feature:4025175-4025400:-1:exon
so has part: feature:4024926-4025074:-1:exon
so has part: feature:4023864-4024544:-1:exon
so has part: feature:4022895-4023208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4025175-4025400:-1:exon

position:4025175:-1
position: 4025175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4024926-4025074:-1:exon

position:4024926:-1
position: 4024926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025074:-1
position: 4025074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4023864-4024544:-1:exon

position:4023864:-1
position: 4023864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024544:-1
position: 4024544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4022895-4023208:-1:exon

position:4023208:-1
position: 4023208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1C chain-like
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMVDNEAIYDVCRRNLDIERPTYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPLISAEKAYHEQLSVAEITNACFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNASIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISMAWTRLNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYQEVAVDSAELDRKGEEEE
SIO_010081: LOC127566496
subclass of: SO_0000673
so part of: LOC127566496
location: complement(join(4022912..4023208,4023864..4024544,4024926..4025074,4025175..4025295))
location: region:4022912-4025295:-1
so has part: feature:4025175-4025295:-1:exon
so has part: feature:4024926-4025074:-1:exon
so has part: feature:4023864-4024544:-1:exon
so has part: feature:4022912-4023208:-1:exon

XP_051864891.1
type: Protein
SIO_000068: ncbiprotein

position:4022912:-1
position: 4022912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025295:-1
position: 4025295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4025175-4025295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4024926-4025074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4023864-4024544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022912-4023208:-1:exon

LOC127566490
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566490
note: tubulin alpha-1A chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4032781..4035529
location: region:4032781-4035529:1
so has part: feature:4032781-4035529:1:exon
subclass of: SO_0000010

127566490
type: Gene
SIO_000068: ncbigene

position:4032781:1
position: 4032781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4035529:1
position: 4035529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032781-4035529:1:exon

LOC127566490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566490
product: tubulin alpha-1A chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008921.1
SIO_010081: LOC127566490
subclass of: SO_0000673
so part of: LOC127566490
location: join(4032781..4032804,4033220..4033442,4033542..4033690,4033837..4034517,4035146..4035529)
location: region:4032781-4035529:1
so has part: feature:4032781-4032804:1:exon
so has part: feature:4033220-4033442:1:exon
so has part: feature:4033542-4033690:1:exon
so has part: feature:4033837-4034517:1:exon
so has part: feature:4035146-4035529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4032781-4032804:1:exon

position:4032804:1
position: 4032804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4033220-4033442:1:exon

position:4033220:1
position: 4033220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4033442:1
position: 4033442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4033542-4033690:1:exon

position:4033542:1
position: 4033542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4033690:1
position: 4033690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4033837-4034517:1:exon

position:4033837:1
position: 4033837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034517:1
position: 4034517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4035146-4035529:1:exon

position:4035146:1
position: 4035146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain-like
translation: MRECLSIHIGQAGVQLGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMLDNEAIYDVCRRNLDIERPTYTNLNRLLGQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPLISAERAYHEQLSVAEITNSCFEPANQMLKCDPRQGKYMACCMLYRGDVVPKDVNAAIATIKSKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAVAMAWTRMNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDLASLEKDYEEVGVDSADLDKRAEEEE
SIO_010081: LOC127566490
subclass of: SO_0000673
so part of: LOC127566490
location: join(4032802..4032804,4033220..4033442,4033542..4033690,4033837..4034517,4035146..4035442)
location: region:4032802-4035442:1
so has part: feature:4032802-4032804:1:exon
so has part: feature:4033220-4033442:1:exon
so has part: feature:4033542-4033690:1:exon
so has part: feature:4033837-4034517:1:exon
so has part: feature:4035146-4035442:1:exon

XP_051864881.1
type: Protein
SIO_000068: ncbiprotein

position:4032802:1
position: 4032802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4035442:1
position: 4035442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032802-4032804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4033220-4033442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4033542-4033690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4033837-4034517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4035146-4035442:1:exon

LOC127566489
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566489
note: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4038174..4062443
location: region:4038174-4062443:1
so has part: feature:4038174-4062443:1:exon
subclass of: SO_0000010

127566489
type: Gene
SIO_000068: ncbigene

position:4038174:1
position: 4038174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062443:1
position: 4062443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038174-4062443:1:exon

LOC127566489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566489
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008917.1
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4038174..4038258,4041166..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4062443)
location: region:4038174-4062443:1
so has part: feature:4038174-4038258:1:exon
so has part: feature:4041166-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4062443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4038174-4038258:1:exon

position:4038258:1
position: 4038258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4041166-4041347:1:exon

position:4041166:1
position: 4041166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041347:1
position: 4041347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4044177-4044368:1:exon

position:4044177:1
position: 4044177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4044368:1
position: 4044368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4045019-4045147:1:exon

position:4045019:1
position: 4045019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4045147:1
position: 4045147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4046395-4046614:1:exon

position:4046395:1
position: 4046395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046614:1
position: 4046614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4049069-4049253:1:exon

position:4049069:1
position: 4049069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049253:1
position: 4049253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4050091-4050270:1:exon

position:4050091:1
position: 4050091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050270:1
position: 4050270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4052732-4052896:1:exon

position:4052732:1
position: 4052732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052896:1
position: 4052896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4054855-4055123:1:exon

position:4054855:1
position: 4054855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4055123:1
position: 4055123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4056291-4056453:1:exon

position:4056291:1
position: 4056291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056453:1
position: 4056453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4060292-4062443:1:exon

position:4060292:1
position: 4060292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566489
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008918.1
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4038201..4038258,4040290..4040434,4041166..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4062443)
location: region:4038201-4062443:1
so has part: feature:4038201-4038258:1:exon
so has part: feature:4040290-4040434:1:exon
so has part: feature:4041166-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4062443:1:exon

position:4038201:1
position: 4038201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038201-4038258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4040290-4040434:1:exon

position:4040290:1
position: 4040290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4040434:1
position: 4040434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4041166-4041347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4044177-4044368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045019-4045147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4046395-4046614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4049069-4049253:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4050091-4050270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4052732-4052896:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4054855-4055123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4056291-4056453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4060292-4062443:1:exon

LOC127566489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566489
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008920.1
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4038374..4038493,4040290..4040434,4041166..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4062443)
location: region:4038374-4062443:1
so has part: feature:4038374-4038493:1:exon
so has part: feature:4040290-4040434:1:exon
so has part: feature:4041166-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4062443:1:exon

position:4038374:1
position: 4038374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038374-4038493:1:exon

position:4038493:1
position: 4038493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4040290-4040434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4041166-4041347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4044177-4044368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045019-4045147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4046395-4046614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4049069-4049253:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4050091-4050270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4052732-4052896:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4054855-4055123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4056291-4056453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4060292-4062443:1:exon

LOC127566489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like
translation: MGFFVHSCPFLLRVPRIFLQKAGASLAVYAQRCPVMSRGLATSVINLRCVKAKEPAGAGAFTQPLLTSAEAMVRFSGQDLLSIAANCPFVELEVKRGLSKVIRKASLAVQEDVTDTSSQQERPRRAEIPGWQTDLDTKDQDSASTVCDGNNSVTHLLQDNMNRENAFDYDGFFERKIKEKKGDHTYRVFKTVNRKTEEYPFAEHYSEPPAEKRDVSVWCSNDYLGMSSHPRVLKAITETVKQFGAGAGGTRNISGTSKFHVDLEMELAGLHRKDAALLFSSCFVGNDSTLFTLARLLPGCEIYSDAGNHASMIQGIRNSGAPKYVFRHNDVQHLEQLLSESDPKTPKIVAFETVHSMDGAICPLEEMCDVAHRYGAITFVDEVHAVGLYGAHGAGIGERDGVLHKLDIVSGTLGKAFGCVGGYIASTAALVDTVRSYAAGFIFTTALPPMVLAGALESVRTLQGDEGRLLRRTHQRNVKYMRRLLMDAGLPVINCPSHIIPIRVGDAAKNTEVCNVMLSRYGIYVQAINYPTVPRGEELLRLAPSPHHQPRMMDYFVDCLVGTWKDLGLPTQHLSPTACSFCQRPLHFELMTEWERSYFGGAEGQYITACA
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4041179..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4060455)
location: region:4041179-4060455:1
so has part: feature:4041179-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4060455:1:exon

XP_051864877.1
type: Protein
SIO_000068: ncbiprotein

position:4041179:1
position: 4041179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4060455:1
position: 4060455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041179-4041347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4044177-4044368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045019-4045147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4046395-4046614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4049069-4049253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4050091-4050270:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052732-4052896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054855-4055123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4056291-4056453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060292-4060455:1:exon

LOC127566489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like
translation: MGFFVHSCPFLLRVPRIFLQKAGASLAVYAQRCPVMSRGLATSVINLRCVKAKEPAGAGAFTQPLLTSAEAMVRFSGQDLLSIAANCPFVELEVKRGLSKVIRKASLAVQEDVTDTSSQQERPRRAEIPGWQTDLDTKDQDSASTVCDGNNSVTHLLQDNMNRENAFDYDGFFERKIKEKKGDHTYRVFKTVNRKTEEYPFAEHYSEPPAEKRDVSVWCSNDYLGMSSHPRVLKAITETVKQFGAGAGGTRNISGTSKFHVDLEMELAGLHRKDAALLFSSCFVGNDSTLFTLARLLPGCEIYSDAGNHASMIQGIRNSGAPKYVFRHNDVQHLEQLLSESDPKTPKIVAFETVHSMDGAICPLEEMCDVAHRYGAITFVDEVHAVGLYGAHGAGIGERDGVLHKLDIVSGTLGKAFGCVGGYIASTAALVDTVRSYAAGFIFTTALPPMVLAGALESVRTLQGDEGRLLRRTHQRNVKYMRRLLMDAGLPVINCPSHIIPIRVGDAAKNTEVCNVMLSRYGIYVQAINYPTVPRGEELLRLAPSPHHQPRMMDYFVDCLVGTWKDLGLPTQHLSPTACSFCQRPLHFELMTEWERSYFGGAEGQYITACA
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4041179..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4060455)
location: region:4041179-4060455:1
so has part: feature:4041179-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4060455:1:exon

XP_051864878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4041179-4041347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4044177-4044368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045019-4045147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4046395-4046614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4049069-4049253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4050091-4050270:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052732-4052896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054855-4055123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4056291-4056453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060292-4060455:1:exon

LOC127566489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like
translation: MGFFVHSCPFLLRVPRIFLQKAGASLAVYAQRCPVMSRGLATSVINLRCVKAKEPAGAGAFTQPLLTSAEAMVRFSGQDLLSIAANCPFVELEVKRGLSKVIRKASLAVQEDVTDTSSQQERPRRAEIPGWQTDLDTKDQDSASTVCDGNNSVTHLLQDNMNRENAFDYDGFFERKIKEKKGDHTYRVFKTVNRKTEEYPFAEHYSEPPAEKRDVSVWCSNDYLGMSSHPRVLKAITETVKQFGAGAGGTRNISGTSKFHVDLEMELAGLHRKDAALLFSSCFVGNDSTLFTLARLLPGCEIYSDAGNHASMIQGIRNSGAPKYVFRHNDVQHLEQLLSESDPKTPKIVAFETVHSMDGAICPLEEMCDVAHRYGAITFVDEVHAVGLYGAHGAGIGERDGVLHKLDIVSGTLGKAFGCVGGYIASTAALVDTVRSYAAGFIFTTALPPMVLAGALESVRTLQGDEGRLLRRTHQRNVKYMRRLLMDAGLPVINCPSHIIPIRVGDAAKNTEVCNVMLSRYGIYVQAINYPTVPRGEELLRLAPSPHHQPRMMDYFVDCLVGTWKDLGLPTQHLSPTACSFCQRPLHFELMTEWERSYFGGAEGQYITACA
SIO_010081: LOC127566489
subclass of: SO_0000673
so part of: LOC127566489
location: join(4041179..4041347,4044177..4044368,4045019..4045147,4046395..4046614,4049069..4049253,4050091..4050270,4052732..4052896,4054855..4055123,4056291..4056453,4060292..4060455)
location: region:4041179-4060455:1
so has part: feature:4041179-4041347:1:exon
so has part: feature:4044177-4044368:1:exon
so has part: feature:4045019-4045147:1:exon
so has part: feature:4046395-4046614:1:exon
so has part: feature:4049069-4049253:1:exon
so has part: feature:4050091-4050270:1:exon
so has part: feature:4052732-4052896:1:exon
so has part: feature:4054855-4055123:1:exon
so has part: feature:4056291-4056453:1:exon
so has part: feature:4060292-4060455:1:exon

XP_051864880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4041179-4041347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4044177-4044368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045019-4045147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4046395-4046614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4049069-4049253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4050091-4050270:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052732-4052896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054855-4055123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4056291-4056453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060292-4060455:1:exon

ccdc115
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: ccdc115
note: coiled-coil domain containing 115; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4062748..4074022)
location: region:4062748-4074022:-1
so has part: feature:4062748-4074022:-1:exon
subclass of: SO_0000010

127566493
type: Gene
SIO_000068: ncbigene

position:4062748:-1
position: 4062748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074022:-1
position: 4074022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4062748-4074022:-1:exon

ccdc115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ccdc115
product: coiled-coil domain containing 115, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008925.1
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4062748..4063612,4064748..4064954,4070221..4070357,4071535..4071638,4073531..4074022))
location: region:4062748-4074022:-1
so has part: feature:4073531-4074022:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4062748-4063612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4073531-4074022:-1:exon

position:4073531:-1
position: 4073531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

position:4071535:-1
position: 4071535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071638:-1
position: 4071638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

position:4070221:-1
position: 4070221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070357:-1
position: 4070357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

position:4064748:-1
position: 4064748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064954:-1
position: 4064954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4062748-4063612:-1:exon

position:4063612:-1
position: 4063612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccdc115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ccdc115
product: coiled-coil domain containing 115, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008926.1
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4062748..4063612,4064748..4064954,4070221..4070357,4071535..4071638,4073045..4073495))
location: region:4062748-4073495:-1
so has part: feature:4073045-4073495:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4062748-4063612:-1:exon

position:4073495:-1
position: 4073495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073045-4073495:-1:exon

position:4073045:-1
position: 4073045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4062748-4063612:-1:exon

ccdc115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ccdc115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115 isoform X1
translation: MMKRGEEAARLLVQSQPGGGEIGGEESYWCSRPSITEEAPVIGQTGGKLACDWCEEPSVTSRRRGGRPALSEAAAMGSEAGPESLCERLDEQLLRYLEEMEQLNDRRDQLERLMEQGWFLLSKARYSMGNKRVSALQYGPEMVPLARVDVSQEDDGHYSFRVERVDSGDVQTVGAVVDESLEMEEIGPKEWEGSPLVRRRRPRGSGEEGQKAPPADGLVGGSRASTKDGRRVAQQGATLPAQEPLNWFGILVPQSLRLAQASFKEVVKLAAEVATLHSRLASTKKQYQDLLQQKQTLVGPQEG
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4063497..4063612,4064748..4064954,4070221..4070357,4071535..4071638,4073531..4073878))
location: region:4063497-4073878:-1
so has part: feature:4073531-4073878:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4063497-4063612:-1:exon

XP_051864885.1
type: Protein
SIO_000068: ncbiprotein

position:4063497:-1
position: 4063497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073878:-1
position: 4073878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073531-4073878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063497-4063612:-1:exon

ccdc115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ccdc115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115 isoform X2
translation: MGSTNRSPPLTPPSEGSTNRSPPLTPPSEGSTNRSPPLTPPSEGSTNRSPPLTPPSEGSTNRSPPLTPPSEGSTNRSPPLTPQSGWFLLSKARYSMGNKRVSALQYGPEMVPLARVDVSQEDDGHYSFRVERVDSGDVQTVGAVVDESLEMEEIGPKEWEGSPLVRRRRPRGSGEEGQKAPPADGLVGGSRASTKDGRRVAQQGATLPAQEPLNWFGILVPQSLRLAQASFKEVVKLAAEVATLHSRLASTKKQYQDLLQQKQTLVGPQEG
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4063497..4063612,4064748..4064954,4070221..4070357,4071535..4071638,4073045..4073296))
location: region:4063497-4073296:-1
so has part: feature:4073045-4073296:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4063497-4063612:-1:exon

XP_051864886.1
type: Protein
SIO_000068: ncbiprotein

position:4073296:-1
position: 4073296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073045-4073296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063497-4063612:-1:exon

ccdc115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ccdc115
product: coiled-coil domain containing 115, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052008927.1
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4063667..4064161,4064748..4064954,4070221..4070357,4071535..4071638,4073531..4074022))
location: region:4063667-4074022:-1
so has part: feature:4073531-4074022:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4063667-4064161:-1:exon

position:4063667:-1
position: 4063667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073531-4074022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063667-4064161:-1:exon

position:4064161:-1
position: 4064161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccdc115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ccdc115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115 isoform X3
translation: MMKRGEEAARLLVQSQPGGGEIGGEESYWCSRPSITEEAPVIGQTGGKLACDWCEEPSVTSRRRGGRPALSEAAAMGSEAGPESLCERLDEQLLRYLEEMEQLNDRRDQLERLMEQGWFLLSKARYSMGNKRVSALQYGPEMVPLARVDVSQEDDGHYSFRVERVDSGDVQTVGAVVDESLEMEEIGPKEWEGSPLVRRRRPRGSGEEGQKAPPADGLVGGSRASTKDGRRVAQQGATLPAQEPLNWFGILVPQSLRLAQASFKED
SIO_010081: ccdc115
subclass of: SO_0000673
so part of: ccdc115
location: complement(join(4064157..4064161,4064748..4064954,4070221..4070357,4071535..4071638,4073531..4073878))
location: region:4064157-4073878:-1
so has part: feature:4073531-4073878:-1:exon
so has part: feature:4071535-4071638:-1:exon
so has part: feature:4070221-4070357:-1:exon
so has part: feature:4064748-4064954:-1:exon
so has part: feature:4064157-4064161:-1:exon

XP_051864887.1
type: Protein
SIO_000068: ncbiprotein

position:4064157:-1
position: 4064157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073531-4073878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071535-4071638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4070221-4070357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064748-4064954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4064157-4064161:-1:exon

imp4
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: imp4
note: IMP U3 small nucleolar ribonucleoprotein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4074061..4095393
location: region:4074061-4095393:1
so has part: feature:4074061-4095393:1:exon
subclass of: SO_0000010

127566494
type: Gene
SIO_000068: ncbigene

position:4074061:1
position: 4074061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4095393:1
position: 4095393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074061-4095393:1:exon

imp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: imp4
product: IMP U3 small nucleolar ribonucleoprotein 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008929.1
SIO_010081: imp4
subclass of: SO_0000673
so part of: imp4
location: join(4074061..4074206,4078167..4078275,4079306..4079389,4082870..4082979,4084581..4084713,4086276..4086430,4088441..4088535,4091688..4091761,4095099..4095393)
location: region:4074061-4095393:1
so has part: feature:4074061-4074206:1:exon
so has part: feature:4078167-4078275:1:exon
so has part: feature:4079306-4079389:1:exon
so has part: feature:4082870-4082979:1:exon
so has part: feature:4084581-4084713:1:exon
so has part: feature:4086276-4086430:1:exon
so has part: feature:4088441-4088535:1:exon
so has part: feature:4091688-4091761:1:exon
so has part: feature:4095099-4095393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4074061-4074206:1:exon

position:4074206:1
position: 4074206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4078167-4078275:1:exon

position:4078167:1
position: 4078167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4078275:1
position: 4078275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4079306-4079389:1:exon

position:4079306:1
position: 4079306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079389:1
position: 4079389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4082870-4082979:1:exon

position:4082870:1
position: 4082870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4082979:1
position: 4082979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4084581-4084713:1:exon

position:4084581:1
position: 4084581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4084713:1
position: 4084713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4086276-4086430:1:exon

position:4086276:1
position: 4086276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086430:1
position: 4086430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4088441-4088535:1:exon

position:4088441:1
position: 4088441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088535:1
position: 4088535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4091688-4091761:1:exon

position:4091688:1
position: 4091688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4091761:1
position: 4091761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4095099-4095393:1:exon

position:4095099:1
position: 4095099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

imp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: imp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar ribonucleoprotein protein IMP4
translation: MLRRQARLRREYLYRKAQEDKLRSIEEKKQKLKSALDENKLIPTELRREALELQKATEYDDGGGQGVSSQMDDEYKWAGVEDPKVMITTSRDPSSKLKQFVKEVKLIFPNSQRMNRGKHDIEALVTACKANAVTDLVIVHEHRGVPDGLVVCHLPFGPTAYFALSNVVMRHDIPRIGTMSEAYPHLIFHNFSSRLGQRVSSILKYLFPVPKEDSKRVITFANQDDYISFRHHVYRKVDHKNIELSEVGPRFEMKLYQIKLGTLENEKTSETEWCWHPYTNTAKKKRYLSIE
SIO_010081: imp4
subclass of: SO_0000673
so part of: imp4
location: join(4074204..4074206,4078167..4078275,4079306..4079389,4082870..4082979,4084581..4084713,4086276..4086430,4088441..4088535,4091688..4091761,4095099..4095211)
location: region:4074204-4095211:1
so has part: feature:4074204-4074206:1:exon
so has part: feature:4078167-4078275:1:exon
so has part: feature:4079306-4079389:1:exon
so has part: feature:4082870-4082979:1:exon
so has part: feature:4084581-4084713:1:exon
so has part: feature:4086276-4086430:1:exon
so has part: feature:4088441-4088535:1:exon
so has part: feature:4091688-4091761:1:exon
so has part: feature:4095099-4095211:1:exon

XP_051864889.1
type: Protein
SIO_000068: ncbiprotein

position:4074204:1
position: 4074204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4095211:1
position: 4095211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074204-4074206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4078167-4078275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4079306-4079389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4082870-4082979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4084581-4084713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086276-4086430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4088441-4088535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4091688-4091761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4095099-4095211:1:exon

LOC127566491
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566491
note: tubulin alpha-3 chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4112624..4142453
location: region:4112624-4142453:1
so has part: feature:4112624-4142453:1:exon
subclass of: SO_0000010

127566491
type: Gene
SIO_000068: ncbigene

position:4112624:1
position: 4112624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4142453:1
position: 4142453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112624-4142453:1:exon

LOC127566491
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566491
product: tubulin alpha-3 chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 133 Proteins
transcript id: XM_052008922.1
SIO_010081: LOC127566491
subclass of: SO_0000673
so part of: LOC127566491
location: join(4112624..4112644,4112843..4113065,4114057..4114205,4116542..4117222,4142154..4142453)
location: region:4112624-4142453:1
so has part: feature:4112624-4112644:1:exon
so has part: feature:4112843-4113065:1:exon
so has part: feature:4114057-4114205:1:exon
so has part: feature:4116542-4117222:1:exon
so has part: feature:4142154-4142453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4112624-4112644:1:exon

position:4112644:1
position: 4112644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4112843-4113065:1:exon

position:4112843:1
position: 4112843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4113065:1
position: 4113065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4114057-4114205:1:exon

position:4114057:1
position: 4114057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4114205:1
position: 4114205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4116542-4117222:1:exon

position:4116542:1
position: 4116542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117222:1
position: 4117222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4142154-4142453:1:exon

position:4142154:1
position: 4142154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566491
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-3 chain-like isoform X1
translation: MNQVVKKRECISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHIPRAVFMDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMFDNEAVYDICRRNLDIERPTYTNLNRLLGQMVSSITASLRFDGALNVDLLEFQTNLVPYPRIHFPLLCYAPLISAEKAYHEQLSVAEITNSCFEPANQTVKCDPRQGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAVAMAWTRMNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDLASLEKDYEEVGVDSAELDKAAEEGEE
SIO_010081: LOC127566491
subclass of: SO_0000673
so part of: LOC127566491
location: join(4112624..4112644,4112843..4113065,4114057..4114205,4116542..4117222,4142154..4142453)
location: region:4112624-4142453:1
so has part: feature:4112624-4112644:1:exon
so has part: feature:4112843-4113065:1:exon
so has part: feature:4114057-4114205:1:exon
so has part: feature:4116542-4117222:1:exon
so has part: feature:4142154-4142453:1:exon

XP_051864882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4112624-4112644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4112843-4113065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4114057-4114205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4116542-4117222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4142154-4142453:1:exon

LOC127566491
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566491
product: tubulin alpha-3 chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 447 Proteins
transcript id: XM_052008923.1
SIO_010081: LOC127566491
subclass of: SO_0000673
so part of: LOC127566491
location: join(4112897..4113065,4114057..4114205,4116542..4117222,4121937..4122233)
location: region:4112897-4122233:1
so has part: feature:4112897-4113065:1:exon
so has part: feature:4114057-4114205:1:exon
so has part: feature:4116542-4117222:1:exon
so has part: feature:4121937-4122233:1:exon

position:4112897:1
position: 4112897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4122233:1
position: 4122233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112897-4113065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114057-4114205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4116542-4117222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4121937-4122233:1:exon

position:4121937:1
position: 4121937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566491
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-3 chain-like isoform X2
translation: MPSDKTIGGGDDSFNTFFSETGAGKHIPRAVFMDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMFDNEAVYDICRRNLDIERPTYTNLNRLLGQMVSSITASLRFDGALNVDLLEFQTNLVPYPRIHFPLLCYAPLISAEKAYHEQLSVAEITNSCFEPANQTVKCDPRQGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISMAWTRLNLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDLASLEKDYEEVAIDSSDLDRKVEEEE
SIO_010081: LOC127566491
subclass of: SO_0000673
so part of: LOC127566491
location: join(4112945..4113065,4114057..4114205,4116542..4117222,4121937..4122233)
location: region:4112945-4122233:1
so has part: feature:4112945-4113065:1:exon
so has part: feature:4114057-4114205:1:exon
so has part: feature:4116542-4117222:1:exon
so has part: feature:4121937-4122233:1:exon

XP_051864883.1
type: Protein
SIO_000068: ncbiprotein

position:4112945:1
position: 4112945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112945-4113065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114057-4114205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4116542-4117222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4121937-4122233:1:exon

LOC127566497
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566497
note: tubulin alpha-1B chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4130934..4134191)
location: region:4130934-4134191:-1
so has part: feature:4130934-4134191:-1:exon
subclass of: SO_0000010

127566497
type: Gene
SIO_000068: ncbigene

position:4130934:-1
position: 4130934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4134191:-1
position: 4134191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130934-4134191:-1:exon

LOC127566497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566497
product: tubulin alpha-1B chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 552 Proteins
transcript id: XM_052008933.1
SIO_010081: LOC127566497
subclass of: SO_0000673
so part of: LOC127566497
location: complement(join(4130934..4131233,4131909..4132589,4133788..4133936,4134036..4134191))
location: region:4130934-4134191:-1
so has part: feature:4134036-4134191:-1:exon
so has part: feature:4133788-4133936:-1:exon
so has part: feature:4131909-4132589:-1:exon
so has part: feature:4130934-4131233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4134036-4134191:-1:exon

position:4134036:-1
position: 4134036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4133788-4133936:-1:exon

position:4133788:-1
position: 4133788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133936:-1
position: 4133936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4131909-4132589:-1:exon

position:4131909:-1
position: 4131909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132589:-1
position: 4132589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4130934-4131233:-1:exon

position:4131233:-1
position: 4131233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1B chain-like
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEIVDLVLDRIRKVADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSVLVTHCTLEHSDCAFMVDNEAIYDVCRRNLDIERPTYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPLISAEKAYHEQLSVAEITNACFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNASIATIKSKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISMAWTRLDLKFDKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYQEVAVDSAELDKAAEEGEE
SIO_010081: LOC127566497
subclass of: SO_0000673
so part of: LOC127566497
location: complement(join(4130934..4131233,4131909..4132589,4133788..4133936,4134036..4134156))
location: region:4130934-4134156:-1
so has part: feature:4134036-4134156:-1:exon
so has part: feature:4133788-4133936:-1:exon
so has part: feature:4131909-4132589:-1:exon
so has part: feature:4130934-4131233:-1:exon

XP_051864893.1
type: Protein
SIO_000068: ncbiprotein

position:4134156:-1
position: 4134156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4134036-4134156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4133788-4133936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4131909-4132589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4130934-4131233:-1:exon

LOC127566501
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566501
note: uncharacterized LOC127566501; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4139727..4141879
location: region:4139727-4141879:1
so has part: feature:4139727-4141879:1:exon
subclass of: SO_0000010

127566501
type: Gene
SIO_000068: ncbigene

position:4139727:1
position: 4139727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141879:1
position: 4141879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139727-4141879:1:exon

LOC127566501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566501
product: uncharacterized LOC127566501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_052008938.1
SIO_010081: LOC127566501
subclass of: SO_0000673
so part of: LOC127566501
location: join(4139727..4139800,4140994..4141216,4141316..4141464,4141763..4141879)
location: region:4139727-4141879:1
so has part: feature:4139727-4139800:1:exon
so has part: feature:4140994-4141216:1:exon
so has part: feature:4141316-4141464:1:exon
so has part: feature:4141763-4141879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4139727-4139800:1:exon

position:4139800:1
position: 4139800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4140994-4141216:1:exon

position:4140994:1
position: 4140994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141216:1
position: 4141216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4141316-4141464:1:exon

position:4141316:1
position: 4141316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141464:1
position: 4141464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4141763-4141879:1:exon

position:4141763:1
position: 4141763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127566501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC127566501
translation: MRECISVHVGQAGCQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSIGKEVVDLVLDRIRKLADQCTGLQGLEGRRRGVVRLLCSETVGMQRAEWPHSAR
SIO_010081: LOC127566501
subclass of: SO_0000673
so part of: LOC127566501
location: join(4139798..4139800,4140994..4141216,4141316..4141464,4141763..4141879)
location: region:4139798-4141879:1
so has part: feature:4139798-4139800:1:exon
so has part: feature:4140994-4141216:1:exon
so has part: feature:4141316-4141464:1:exon
so has part: feature:4141763-4141879:1:exon

XP_051864898.1
type: Protein
SIO_000068: ncbiprotein

position:4139798:1
position: 4139798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139798-4139800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4140994-4141216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4141316-4141464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4141763-4141879:1:exon

LOC127566492
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566492
note: microphthalmia-associated transcription factor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4152716..4172287)
location: region:4152716-4172287:-1
so has part: feature:4152716-4172287:-1:exon
subclass of: SO_0000010

127566492
type: Gene
SIO_000068: ncbigene

position:4152716:-1
position: 4152716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4172287:-1
position: 4172287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4152716-4172287:-1:exon

LOC127566492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566492
product: microphthalmia-associated transcription factor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 Proteins
transcript id: XM_052008924.1
SIO_010081: LOC127566492
subclass of: SO_0000673
so part of: LOC127566492
location: complement(join(4152716..4153316,4153443..4153590,4155640..4155715,4156418..4156474,4156773..4156887,4157348..4157443,4158336..4158560,4160499..4160733,4169127..4169243,4172218..4172287))
location: region:4152716-4172287:-1
so has part: feature:4172218-4172287:-1:exon
so has part: feature:4169127-4169243:-1:exon
so has part: feature:4160499-4160733:-1:exon
so has part: feature:4158336-4158560:-1:exon
so has part: feature:4157348-4157443:-1:exon
so has part: feature:4156773-4156887:-1:exon
so has part: feature:4156418-4156474:-1:exon
so has part: feature:4155640-4155715:-1:exon
so has part: feature:4153443-4153590:-1:exon
so has part: feature:4152716-4153316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4172218-4172287:-1:exon

position:4172218:-1
position: 4172218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4169127-4169243:-1:exon

position:4169127:-1
position: 4169127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4169243:-1
position: 4169243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4160499-4160733:-1:exon

position:4160499:-1
position: 4160499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160733:-1
position: 4160733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4158336-4158560:-1:exon

position:4158336:-1
position: 4158336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4158560:-1
position: 4158560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4157348-4157443:-1:exon

position:4157348:-1
position: 4157348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157443:-1
position: 4157443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4156773-4156887:-1:exon

position:4156773:-1
position: 4156773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4156887:-1
position: 4156887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4156418-4156474:-1:exon

position:4156418:-1
position: 4156418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4156474:-1
position: 4156474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4155640-4155715:-1:exon

position:4155640:-1
position: 4155640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155715:-1
position: 4155715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4153443-4153590:-1:exon

position:4153443:-1
position: 4153443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4153590:-1
position: 4153590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4152716-4153316:-1:exon

position:4153316:-1
position: 4153316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microphthalmia-associated transcription factor-like
translation: MTSRVLLRQQLMREQAQEQERREQQAAAQREQERASPSQSRAIAVAGPLGLPAKAQVPMEILKVQTHLENPTKYHIQQSQRQQVKQYLSTTLGSKAASQALAAPLSPGPLEQAAPSAAGAAPSSPMVLLNVGSNPETEMDDVIDEIISLESSYNDDGLGLLDCQLQMPNTLPVSGNLLNVYTNQSLTNATITVSNSCPAKLPNTKESTDADVKAFIKERQKKDNHNLIERRRRFNINDRIKELGAMIPKSNDPEARWNKGTILKASVDYIRKLQKESSRSKELESRQRKLEHANRALLLRIQELEIQARVHGLSLTSPSGLSTAQLTAQVIKQEVPGPDYLLSGGSQAGAEAGPAYDLDLDLGLGLGPGLEPLAELPYPLKLDSGLGDVLMEDSLSPVGACDPLLSSFSPGASKTSSRRSSFSMEEEPGS
SIO_010081: LOC127566492
subclass of: SO_0000673
so part of: LOC127566492
location: complement(join(4152930..4153316,4153443..4153590,4155640..4155715,4156418..4156474,4156773..4156887,4157348..4157443,4158336..4158560,4160499..4160687))
location: region:4152930-4160687:-1
so has part: feature:4160499-4160687:-1:exon
so has part: feature:4158336-4158560:-1:exon
so has part: feature:4157348-4157443:-1:exon
so has part: feature:4156773-4156887:-1:exon
so has part: feature:4156418-4156474:-1:exon
so has part: feature:4155640-4155715:-1:exon
so has part: feature:4153443-4153590:-1:exon
so has part: feature:4152930-4153316:-1:exon

XP_051864884.1
type: Protein
SIO_000068: ncbiprotein

position:4152930:-1
position: 4152930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160687:-1
position: 4160687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4160499-4160687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158336-4158560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4157348-4157443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4156773-4156887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4156418-4156474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4155640-4155715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4153443-4153590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152930-4153316:-1:exon

LOC127566500
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127566500
note: PRA1 family protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4186390..4190991)
location: region:4186390-4190991:-1
so has part: feature:4186390-4190991:-1:exon
subclass of: SO_0000010

127566500
type: Gene
SIO_000068: ncbigene

position:4186390:-1
position: 4186390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190991:-1
position: 4190991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4186390-4190991:-1:exon

LOC127566500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127566500
product: PRA1 family protein 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052008937.1
SIO_010081: LOC127566500
subclass of: SO_0000673
so part of: LOC127566500
location: complement(join(4186390..4186998,4187797..4188014,4190766..4190991))
location: region:4186390-4190991:-1
so has part: feature:4190766-4190991:-1:exon
so has part: feature:4187797-4188014:-1:exon
so has part: feature:4186390-4186998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4190766-4190991:-1:exon

position:4190766:-1
position: 4190766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4187797-4188014:-1:exon

position:4187797:-1
position: 4187797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188014:-1
position: 4188014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4186390-4186998:-1:exon

position:4186998:-1
position: 4186998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127566500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127566500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRA1 family protein 2-like
translation: MARNAEVQLPPFRTLDDFLCSSARFSLPDLKDPLRWNNRVINNLLYYQTNYLATVAGILLLVGYMEPLQTVLGGAVVSLCFLGFVWSAENKAVVRRLRRNHPTLCMVGLLGASYCLLSVLGGVAVFLFGITFPMLLIVLHASLRLRNLKNKLENKIESIGLKRTPMGILLEALGQEQEAGS
SIO_010081: LOC127566500
subclass of: SO_0000673
so part of: LOC127566500
location: complement(join(4186859..4186998,4187797..4188014,4190766..4190953))
location: region:4186859-4190953:-1
so has part: feature:4190766-4190953:-1:exon
so has part: feature:4187797-4188014:-1:exon
so has part: feature:4186859-4186998:-1:exon

XP_051864897.1
type: Protein
SIO_000068: ncbiprotein

position:4186859:-1
position: 4186859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190953:-1
position: 4190953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190766-4190953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4187797-4188014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186859-4186998:-1:exon