Pristis pectinata isolate sPriPec2 chromosome 32, sPriPec2.1.pri, whole genome shotgun sequence.
type: Entry
definition: Pristis pectinata isolate sPriPec2 chromosome 32, sPriPec2.1.pri, whole genome shotgun sequence.
sequence version: NC_067436.1
sequence date: 2023-02-26
sequence: sequence
division: CON
label: NC_067436.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA898594
dblink: SAMN12629505
keyword: WGS
keyword: RefSeq
source: Pristis pectinata (smalltooth sawfish)
organism: Pristis pectinata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rhinopristiformes; Pristidae; Pristis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM019886.1.\nAssembly name: sPriPec2.1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/19. The original whole-genome shotgun project has the\naccession WOXU00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 18-NOV-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-11-18; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: sPriPec2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.91x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_009764475.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21749021
topology: linear
so has quality: SO_0000987
location: 1..21749021
location: region:1-21749021:1
RO_0002162: 685728

NC_067436
type: RefSeq
SIO_000068: refseq

PRJNA898594
type: BioProject
SIO_000068: bioproject

SAMN12629505
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21749021:1
position: 21749021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21749021:1:source
so part of: sequence
organism: Pristis pectinata
mol type: genomic DNA
isolate: sPriPec2
chromosome: 32
sex: female
tissue type: blood
dev stage: juvenile
country: USA: Tennessee Reef, Florida
lat lon: 24.766667 N 80.75 W
collection date: 01-Aug-2018
collected by: Bianca Prohaska

685728
type: Taxonomy
SIO_000068: taxonomy

trnap-ugg
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnap-ugg
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(166350..166437)
location: region:166350-166437:-1
so has part: feature:166350-166437:-1:exon
subclass of: SO_0000663

127585380
type: Gene
SIO_000068: ncbigene

position:166350:-1
position: 166350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166437:-1
position: 166437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166350-166437:-1:exon

trnap-ugg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnap-ugg
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(166403..166405),aa:Pro,seq:tgg)
SIO_010081: trnap-ugg
subclass of: SO_0000673
so part of: trnap-ugg
location: complement(join(166350..166385,166402..166437))
location: region:166350-166437:-1
so has part: feature:166402-166437:-1:exon
so has part: feature:166350-166385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166402-166437:-1:exon

position:166402:-1
position: 166402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166350-166385:-1:exon

position:166385:-1
position: 166385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnas-uga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-uga
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 193591..193672
location: region:193591-193672:1
so has part: feature:193591-193672:1:exon
subclass of: SO_0000663

127585364
type: Gene
SIO_000068: ncbigene

position:193591:1
position: 193591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193672:1
position: 193672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193591-193672:1:exon

trnas-uga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-uga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:193624..193626,aa:Ser,seq:tga)
SIO_010081: trnas-uga
subclass of: SO_0000673
so part of: trnas-uga
location: 193591..193672
location: region:193591-193672:1
so has part: feature:193591-193672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193591-193672:1:exon

trnas-cga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-cga
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(200389..200470)
location: region:200389-200470:-1
so has part: feature:200389-200470:-1:exon
subclass of: SO_0000663

127585381
type: Gene
SIO_000068: ncbigene

position:200389:-1
position: 200389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200470:-1
position: 200470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200389-200470:-1:exon

trnas-cga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-cga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(200435..200437),aa:Ser,seq:cga)
SIO_010081: trnas-cga
subclass of: SO_0000673
so part of: trnas-cga
location: complement(200389..200470)
location: region:200389-200470:-1
so has part: feature:200389-200470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200389-200470:-1:exon

trnat-agu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnat-agu
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(225430..225503)
location: region:225430-225503:-1
so has part: feature:225430-225503:-1:exon
subclass of: SO_0000663

127585382
type: Gene
SIO_000068: ncbigene

position:225430:-1
position: 225430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225503:-1
position: 225503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225430-225503:-1:exon

trnat-agu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnat-agu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(225467..225469),aa:Thr,seq:agt)
SIO_010081: trnat-agu
subclass of: SO_0000673
so part of: trnat-agu
location: complement(225430..225503)
location: region:225430-225503:-1
so has part: feature:225430-225503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225430-225503:-1:exon

trnav-cac
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnav-cac
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 259432..259504
location: region:259432-259504:1
so has part: feature:259432-259504:1:exon
subclass of: SO_0000663

127585375
type: Gene
SIO_000068: ncbigene

position:259432:1
position: 259432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259504:1
position: 259504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259432-259504:1:exon

trnav-cac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnav-cac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:259465..259467,aa:Val,seq:cac)
SIO_010081: trnav-cac
subclass of: SO_0000673
so part of: trnav-cac
location: 259432..259504
location: region:259432-259504:1
so has part: feature:259432-259504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259432-259504:1:exon

trnas-cga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-cga
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(267721..267802)
location: region:267721-267802:-1
so has part: feature:267721-267802:-1:exon
subclass of: SO_0000663

127585383
type: Gene
SIO_000068: ncbigene

position:267721:-1
position: 267721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267802:-1
position: 267802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267721-267802:-1:exon

trnas-cga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-cga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(267767..267769),aa:Ser,seq:cga)
SIO_010081: trnas-cga
subclass of: SO_0000673
so part of: trnas-cga
location: complement(267721..267802)
location: region:267721-267802:-1
so has part: feature:267721-267802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267721-267802:-1:exon

trnas-cga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-cga
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 373589..373671
location: region:373589-373671:1
so has part: feature:373589-373671:1:exon
subclass of: SO_0000663

127585386
type: Gene
SIO_000068: ncbigene

position:373589:1
position: 373589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373671:1
position: 373671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373589-373671:1:exon

trnas-cga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-cga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:373622..373624,aa:Ser,seq:cga)
SIO_010081: trnas-cga
subclass of: SO_0000673
so part of: trnas-cga
location: 373589..373671
location: region:373589-373671:1
so has part: feature:373589-373671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373589-373671:1:exon

trnal-caa
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-caa
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(378254..378367)
location: region:378254-378367:-1
so has part: feature:378254-378367:-1:exon
subclass of: SO_0000663

127585384
type: Gene
SIO_000068: ncbigene

position:378254:-1
position: 378254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378367:-1
position: 378367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378254-378367:-1:exon

trnal-caa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-caa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(378331..378333),aa:Leu,seq:caa)
SIO_010081: trnal-caa
subclass of: SO_0000673
so part of: trnal-caa
location: complement(join(378254..378299,378330..378367))
location: region:378254-378367:-1
so has part: feature:378330-378367:-1:exon
so has part: feature:378254-378299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378330-378367:-1:exon

position:378330:-1
position: 378330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378254-378299:-1:exon

position:378299:-1
position: 378299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnas-uga
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-uga
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(378655..378736)
location: region:378655-378736:-1
so has part: feature:378655-378736:-1:exon
subclass of: SO_0000663

127585385
type: Gene
SIO_000068: ncbigene

position:378655:-1
position: 378655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378736:-1
position: 378736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378655-378736:-1:exon

trnas-uga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-uga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(378701..378703),aa:Ser,seq:tga)
SIO_010081: trnas-uga
subclass of: SO_0000673
so part of: trnas-uga
location: complement(378655..378736)
location: region:378655-378736:-1
so has part: feature:378655-378736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378655-378736:-1:exon

trnat-ugu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnat-ugu
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 383073..383146
location: region:383073-383146:1
so has part: feature:383073-383146:1:exon
subclass of: SO_0000663

127585394
type: Gene
SIO_000068: ncbigene

position:383073:1
position: 383073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383146:1
position: 383146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383073-383146:1:exon

trnat-ugu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnat-ugu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:383107..383109,aa:Thr,seq:tgt)
SIO_010081: trnat-ugu
subclass of: SO_0000673
so part of: trnat-ugu
location: 383073..383146
location: region:383073-383146:1
so has part: feature:383073-383146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383073-383146:1:exon

trnal-uag
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-uag
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 412872..412953
location: region:412872-412953:1
so has part: feature:412872-412953:1:exon
subclass of: SO_0000663

127585395
type: Gene
SIO_000068: ncbigene

position:412872:1
position: 412872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412953:1
position: 412953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412872-412953:1:exon

trnal-uag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-uag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:412906..412908,aa:Leu,seq:tag)
SIO_010081: trnal-uag
subclass of: SO_0000673
so part of: trnal-uag
location: 412872..412953
location: region:412872-412953:1
so has part: feature:412872-412953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412872-412953:1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnag-gcc
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(417674..417744)
location: region:417674-417744:-1
so has part: feature:417674-417744:-1:exon
subclass of: SO_0000663

127585387
type: Gene
SIO_000068: ncbigene

position:417674:-1
position: 417674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417744:-1
position: 417744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417674-417744:-1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(417710..417712),aa:Gly,seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: complement(417674..417744)
location: region:417674-417744:-1
so has part: feature:417674-417744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417674-417744:-1:exon

trnai-uau
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnai-uau
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 435723..435816
location: region:435723-435816:1
so has part: feature:435723-435816:1:exon
subclass of: SO_0000663

127585365
type: Gene
SIO_000068: ncbigene

position:435723:1
position: 435723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435816:1
position: 435816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435723-435816:1:exon

trnai-uau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnai-uau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:435757..435759,aa:Ile,seq:tat)
SIO_010081: trnai-uau
subclass of: SO_0000673
so part of: trnai-uau
location: join(435723..435760,435781..435816)
location: region:435723-435816:1
so has part: feature:435723-435760:1:exon
so has part: feature:435781-435816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435723-435760:1:exon

position:435760:1
position: 435760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435781-435816:1:exon

position:435781:1
position: 435781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnai-uau
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnai-uau
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 450484..450577
location: region:450484-450577:1
so has part: feature:450484-450577:1:exon
subclass of: SO_0000663

127585366
type: Gene
SIO_000068: ncbigene

position:450484:1
position: 450484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450577:1
position: 450577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450484-450577:1:exon

trnai-uau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnai-uau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:450518..450520,aa:Ile,seq:tat)
SIO_010081: trnai-uau
subclass of: SO_0000673
so part of: trnai-uau
location: join(450484..450521,450542..450577)
location: region:450484-450577:1
so has part: feature:450484-450521:1:exon
so has part: feature:450542-450577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450484-450521:1:exon

position:450521:1
position: 450521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450542-450577:1:exon

position:450542:1
position: 450542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnal-aag
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-aag
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 456358..456439
location: region:456358-456439:1
so has part: feature:456358-456439:1:exon
subclass of: SO_0000663

127585367
type: Gene
SIO_000068: ncbigene

position:456358:1
position: 456358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456439:1
position: 456439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456358-456439:1:exon

trnal-aag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-aag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:456392..456394,aa:Leu,seq:aag)
SIO_010081: trnal-aag
subclass of: SO_0000673
so part of: trnal-aag
location: 456358..456439
location: region:456358-456439:1
so has part: feature:456358-456439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456358-456439:1:exon

trnat-agu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnat-agu
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(457085..457158)
location: region:457085-457158:-1
so has part: feature:457085-457158:-1:exon
subclass of: SO_0000663

127585388
type: Gene
SIO_000068: ncbigene

position:457085:-1
position: 457085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457158:-1
position: 457158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457085-457158:-1:exon

trnat-agu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnat-agu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(457122..457124),aa:Thr,seq:agt)
SIO_010081: trnat-agu
subclass of: SO_0000673
so part of: trnat-agu
location: complement(457085..457158)
location: region:457085-457158:-1
so has part: feature:457085-457158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457085-457158:-1:exon

trnas-gcu
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnas-gcu
note: transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 461142..461223
location: region:461142-461223:1
so has part: feature:461142-461223:1:exon
subclass of: SO_0000663

127585368
type: Gene
SIO_000068: ncbigene

position:461142:1
position: 461142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461223:1
position: 461223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461142-461223:1:exon

trnas-gcu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnas-gcu
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:461175..461177,aa:Ser,seq:gct)
SIO_010081: trnas-gcu
subclass of: SO_0000673
so part of: trnas-gcu
location: 461142..461223
location: region:461142-461223:1
so has part: feature:461142-461223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461142-461223:1:exon

trnaf-gaa
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnaf-gaa
note: transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(466108..466180)
location: region:466108-466180:-1
so has part: feature:466108-466180:-1:exon
subclass of: SO_0000663

127585389
type: Gene
SIO_000068: ncbigene

position:466108:-1
position: 466108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466180:-1
position: 466180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466108-466180:-1:exon

trnaf-gaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnaf-gaa
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(466145..466147),aa:Phe,seq:gaa)
SIO_010081: trnaf-gaa
subclass of: SO_0000673
so part of: trnaf-gaa
location: complement(466108..466180)
location: region:466108-466180:-1
so has part: feature:466108-466180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466108-466180:-1:exon

trnal-gag
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-gag
note: transfer RNA leucine (anticodon GAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(472313..472394)
location: region:472313-472394:-1
so has part: feature:472313-472394:-1:exon
subclass of: SO_0000663

127585390
type: Gene
SIO_000068: ncbigene

position:472313:-1
position: 472313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472394:-1
position: 472394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472313-472394:-1:exon

trnal-gag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-gag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon GAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(472358..472360),aa:Leu,seq:gag)
SIO_010081: trnal-gag
subclass of: SO_0000673
so part of: trnal-gag
location: complement(472313..472394)
location: region:472313-472394:-1
so has part: feature:472313-472394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472313-472394:-1:exon

trnal-caa
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-caa
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(519083..519165)
location: region:519083-519165:-1
so has part: feature:519083-519165:-1:exon
subclass of: SO_0000663

127585391
type: Gene
SIO_000068: ncbigene

position:519083:-1
position: 519083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519165:-1
position: 519165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519083-519165:-1:exon

trnal-caa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-caa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(519130..519132),aa:Leu,seq:caa)
SIO_010081: trnal-caa
subclass of: SO_0000673
so part of: trnal-caa
location: complement(519083..519165)
location: region:519083-519165:-1
so has part: feature:519083-519165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519083-519165:-1:exon

trnav-cac
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnav-cac
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 598649..598721
location: region:598649-598721:1
so has part: feature:598649-598721:1:exon
subclass of: SO_0000663

127585369
type: Gene
SIO_000068: ncbigene

position:598649:1
position: 598649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598721:1
position: 598721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598649-598721:1:exon

trnav-cac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnav-cac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:598682..598684,aa:Val,seq:cac)
SIO_010081: trnav-cac
subclass of: SO_0000673
so part of: trnav-cac
location: 598649..598721
location: region:598649-598721:1
so has part: feature:598649-598721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598649-598721:1:exon

LOC127585156
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585156
note: nicotinate-nucleotide pyrophosphorylase [carboxylating]-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 609874..615446
location: region:609874-615446:1
so has part: feature:609874-615446:1:exon

127585156
type: Gene
SIO_000068: ncbigene

position:609874:1
position: 609874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615446:1
position: 615446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609874-615446:1:exon

LOC127585156
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127585156
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC127585156
subclass of: SO_0000673
so part of: LOC127585156
location: 609874..610415
location: region:609874-610415:1
so has part: feature:609874-610415:1:exon

position:610415:1
position: 610415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609874-610415:1:exon

LOC127585156
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127585156
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC127585156
subclass of: SO_0000673
so part of: LOC127585156
location: 613710..613841
location: region:613710-613841:1
so has part: feature:613710-613841:1:exon

position:613710:1
position: 613710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613841:1
position: 613841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613710-613841:1:exon

LOC127585156
type: Exon
subclass of: SO_0000147
RO_0002162: 685728
gene: LOC127585156
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC127585156
subclass of: SO_0000673
so part of: LOC127585156
location: 615189..615446
location: region:615189-615446:1
so has part: feature:615189-615446:1:exon

position:615189:1
position: 615189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615189-615446:1:exon

trnal-uaa
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-uaa
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 670543..670656
location: region:670543-670656:1
so has part: feature:670543-670656:1:exon
subclass of: SO_0000663

127585370
type: Gene
SIO_000068: ncbigene

position:670543:1
position: 670543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670656:1
position: 670656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670543-670656:1:exon

trnal-uaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-uaa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:670577..670579,aa:Leu,seq:taa)
SIO_010081: trnal-uaa
subclass of: SO_0000673
so part of: trnal-uaa
location: join(670543..670580,670622..670656)
location: region:670543-670656:1
so has part: feature:670543-670580:1:exon
so has part: feature:670622-670656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670543-670580:1:exon

position:670580:1
position: 670580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670622-670656:1:exon

position:670622:1
position: 670622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnar-acg
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnar-acg
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 698675..698764
location: region:698675-698764:1
so has part: feature:698675-698764:1:exon
subclass of: SO_0000663

127585371
type: Gene
SIO_000068: ncbigene

position:698675:1
position: 698675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698764:1
position: 698764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698675-698764:1:exon

trnar-acg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnar-acg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:698708..698710,aa:Arg,seq:acg)
SIO_010081: trnar-acg
subclass of: SO_0000673
so part of: trnar-acg
location: join(698675..698711,698729..698764)
location: region:698675-698764:1
so has part: feature:698675-698711:1:exon
so has part: feature:698729-698764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698675-698711:1:exon

position:698711:1
position: 698711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698729-698764:1:exon

position:698729:1
position: 698729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnav-uac
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnav-uac
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 780188..780260
location: region:780188-780260:1
so has part: feature:780188-780260:1:exon
subclass of: SO_0000663

127585372
type: Gene
SIO_000068: ncbigene

position:780188:1
position: 780188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780260:1
position: 780260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780188-780260:1:exon

trnav-uac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnav-uac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:780221..780223,aa:Val,seq:tac)
SIO_010081: trnav-uac
subclass of: SO_0000673
so part of: trnav-uac
location: 780188..780260
location: region:780188-780260:1
so has part: feature:780188-780260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780188-780260:1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnah-gug
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 783856..783927
location: region:783856-783927:1
so has part: feature:783856-783927:1:exon
subclass of: SO_0000663

127585373
type: Gene
SIO_000068: ncbigene

position:783856:1
position: 783856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783927:1
position: 783927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783856-783927:1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:783889..783891,aa:His,seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: 783856..783927
location: region:783856-783927:1
so has part: feature:783856-783927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783856-783927:1:exon

trnal-uag
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnal-uag
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 793045..793126
location: region:793045-793126:1
so has part: feature:793045-793126:1:exon
subclass of: SO_0000663

127585374
type: Gene
SIO_000068: ncbigene

position:793045:1
position: 793045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793126:1
position: 793126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793045-793126:1:exon

trnal-uag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnal-uag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:793079..793081,aa:Leu,seq:tag)
SIO_010081: trnal-uag
subclass of: SO_0000673
so part of: trnal-uag
location: 793045..793126
location: region:793045-793126:1
so has part: feature:793045-793126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793045-793126:1:exon

trnav-uac
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: trnav-uac
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 795064..795136
location: region:795064-795136:1
so has part: feature:795064-795136:1:exon
subclass of: SO_0000663

127585376
type: Gene
SIO_000068: ncbigene

position:795064:1
position: 795064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795136:1
position: 795136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795064-795136:1:exon

trnav-uac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 685728
gene: trnav-uac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:795097..795099,aa:Val,seq:tac)
SIO_010081: trnav-uac
subclass of: SO_0000673
so part of: trnav-uac
location: 795064..795136
location: region:795064-795136:1
so has part: feature:795064-795136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795064-795136:1:exon

LOC127585296
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585296
note: C-type lectin domain family 7 member A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961580..979670)
location: region:961580-979670:-1
so has part: feature:961580-979670:-1:exon
subclass of: SO_0000010

127585296
type: Gene
SIO_000068: ncbigene

position:961580:-1
position: 961580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979670:-1
position: 979670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961580-979670:-1:exon

LOC127585296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585296
product: C-type lectin domain family 7 member A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052042645.1
SIO_010081: LOC127585296
subclass of: SO_0000673
so part of: LOC127585296
location: complement(join(961580..961992,974837..974949,976677..976828,977532..977696,978256..978369,979433..979670))
location: region:961580-979670:-1
so has part: feature:979433-979670:-1:exon
so has part: feature:978256-978369:-1:exon
so has part: feature:977532-977696:-1:exon
so has part: feature:976677-976828:-1:exon
so has part: feature:974837-974949:-1:exon
so has part: feature:961580-961992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979433-979670:-1:exon

position:979433:-1
position: 979433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978256-978369:-1:exon

position:978256:-1
position: 978256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978369:-1
position: 978369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977532-977696:-1:exon

position:977532:-1
position: 977532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977696:-1
position: 977696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:976677-976828:-1:exon

position:976677:-1
position: 976677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976828:-1
position: 976828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:974837-974949:-1:exon

position:974837:-1
position: 974837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974949:-1
position: 974949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:961580-961992:-1:exon

position:961992:-1
position: 961992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127585296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 7 member A-like
translation: MRGSKGGSPRGHRQQEEQPAAGEMESQSYDEESELPDLIMDIEDDVLQGQEYEESEVSAETSQDKSRAFFKGLALLGLVLCLVLLALLVYFGATYAGASGKLRTARDSLQNTTEGYLKLQQQVQLREEQFCTQFRNSTEHWLHLFCEKYECPSRICDPGWLLFGRSCFRFLNISRSWDQSREACAELQGHLAIIGSEKVQTFLSEQVKDLSHWIGLTDKVTEGSWVWVDGTKVVDGTTFWANGEPDNAYNRTLRETENCGLLSQRGWADQVCARHFPAICEKSAIRLHLIFQRARRG
SIO_010081: LOC127585296
subclass of: SO_0000673
so part of: LOC127585296
location: complement(join(961812..961992,974837..974949,976677..976828,977532..977696,978256..978369,979433..979601))
location: region:961812-979601:-1
so has part: feature:979433-979601:-1:exon
so has part: feature:978256-978369:-1:exon
so has part: feature:977532-977696:-1:exon
so has part: feature:976677-976828:-1:exon
so has part: feature:974837-974949:-1:exon
so has part: feature:961812-961992:-1:exon

XP_051898605.1
type: Protein
SIO_000068: ncbiprotein

position:961812:-1
position: 961812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979601:-1
position: 979601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979433-979601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978256-978369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977532-977696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:976677-976828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974837-974949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961812-961992:-1:exon

lactb
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: lactb
note: lactamase, beta; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1030692..1093393)
location: region:1030692-1093393:-1
so has part: feature:1030692-1093393:-1:exon
subclass of: SO_0000010

127585298
type: Gene
SIO_000068: ncbigene

position:1030692:-1
position: 1030692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093393:-1
position: 1093393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030692-1093393:-1:exon

lactb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: lactb
product: lactamase, beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042651.1
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1030692..1030818,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093393))
location: region:1030692-1093393:-1
so has part: feature:1092977-1093393:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1030692-1030818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093393:-1:exon

position:1092977:-1
position: 1092977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

position:1075506:-1
position: 1075506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075572:-1
position: 1075572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

position:1065668:-1
position: 1065668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065858:-1
position: 1065858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

position:1043646:-1
position: 1043646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043895:-1
position: 1043895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

position:1042689:-1
position: 1042689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042854:-1
position: 1042854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030692-1030818:-1:exon

position:1030818:-1
position: 1030818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lactb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: lactb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine beta-lactamase-like protein LACTB, mitochondrial isoform X3
translation: MSSYPGRLWRTLGWRRPASVAAWPLHRPPLPELQRPCSHWARPGWAWACRRSLGLGVGVGLGIALTLGLSGGDWIPQSECQSQAEVRQRTPAAGTLETARKAGRDLLQRIKDEVGAPGIVVGVAVDGKEVWSEGLGYADVENRVLCKPDTVMRIASISKPLTMTAIAKLWENGKLDFDAPVQKYVPEFPEKEYEGEKVMITTRLLVSHLSGIRHYEKDVQKIREQKEKEKRQRLVEETAEPKTRQNKKEFEHKEYYIKEKFENISKSLKLFENDPLVFKPGSQFLYSTHAWTLLSAVVERASQQNFLQLMVKLFRDLDMLRTVPDENEPIIYNRASRQEWQLKIRITIWRASQESKMRSRKRRERSMGITTT
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1030707..1030818,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093309))
location: region:1030707-1093309:-1
so has part: feature:1092977-1093309:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1030707-1030818:-1:exon

XP_051898611.1
type: Protein
SIO_000068: ncbiprotein

position:1030707:-1
position: 1030707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093309:-1
position: 1093309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030707-1030818:-1:exon

lactb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: lactb
product: lactamase, beta, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042647.1
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1030849..1032960,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093393))
location: region:1030849-1093393:-1
so has part: feature:1092977-1093393:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1030849-1032960:-1:exon

position:1030849:-1
position: 1030849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030849-1032960:-1:exon

position:1032960:-1
position: 1032960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lactb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: lactb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine beta-lactamase-like protein LACTB, mitochondrial isoform X1
translation: MSSYPGRLWRTLGWRRPASVAAWPLHRPPLPELQRPCSHWARPGWAWACRRSLGLGVGVGLGIALTLGLSGGDWIPQSECQSQAEVRQRTPAAGTLETARKAGRDLLQRIKDEVGAPGIVVGVAVDGKEVWSEGLGYADVENRVLCKPDTVMRIASISKPLTMTAIAKLWENGKLDFDAPVQKYVPEFPEKEYEGEKVMITTRLLVSHLSGIRHYEKDVQKIREQKEKEKRQRLVEETAEPKTRQNKKEFEHKEYYIKEKFENISKSLKLFENDPLVFKPGSQFLYSTHAWTLLSAVVERASQQNFLQLMVKLFRDLDMLRTVPDENEPIIYNRARYYVYNEKGRLVNSPYVDCSYKWAGGGFLSTVQDLLKFGNVMLYSYQAGQLRDEHQALLPGYLRPATMRMIWSPVEKTELNWDRDGSYAMGWGVVEQGQEWGQCRQRRRYLSHTGGSVGASSVLVILPRDPPIPSAGPSEAGAPPQGVVIAILCNLQSVSLNATALKIALEFDKVRSLEFSIPTPDADSPMLAGELNTQRAKFQG
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1032345..1032960,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093309))
location: region:1032345-1093309:-1
so has part: feature:1092977-1093309:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1032345-1032960:-1:exon

XP_051898607.1
type: Protein
SIO_000068: ncbiprotein

position:1032345:-1
position: 1032345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1032345-1032960:-1:exon

lactb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: lactb
product: lactamase, beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042650.1
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1035614..1036024,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093393))
location: region:1035614-1093393:-1
so has part: feature:1092977-1093393:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1035614-1036024:-1:exon

position:1035614:-1
position: 1035614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035614-1036024:-1:exon

position:1036024:-1
position: 1036024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lactb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: lactb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine beta-lactamase-like protein LACTB, mitochondrial isoform X2
translation: MSSYPGRLWRTLGWRRPASVAAWPLHRPPLPELQRPCSHWARPGWAWACRRSLGLGVGVGLGIALTLGLSGGDWIPQSECQSQAEVRQRTPAAGTLETARKAGRDLLQRIKDEVGAPGIVVGVAVDGKEVWSEGLGYADVENRVLCKPDTVMRIASISKPLTMTAIAKLWENGKLDFDAPVQKYVPEFPEKEYEGEKVMITTRLLVSHLSGIRHYEKDVQKIREQKEKEKRQRLVEETAEPKTRQNKKEFEHKEYYIKEKFENISKSLKLFENDPLVFKPGSQFLYSTHAWTLLSAVVERASQQNFLQLMVKLFRDLDMLRTVPDENEPIIYNRARSTADAISLALHSALDHLDNRNSCQAAVHRLQIGVQHNHPIPTHRQA
SIO_010081: lactb
subclass of: SO_0000673
so part of: lactb
location: complement(join(1035883..1036024,1042689..1042854,1043646..1043895,1065668..1065858,1075506..1075572,1092977..1093309))
location: region:1035883-1093309:-1
so has part: feature:1092977-1093309:-1:exon
so has part: feature:1075506-1075572:-1:exon
so has part: feature:1065668-1065858:-1:exon
so has part: feature:1043646-1043895:-1:exon
so has part: feature:1042689-1042854:-1:exon
so has part: feature:1035883-1036024:-1:exon

XP_051898610.1
type: Protein
SIO_000068: ncbiprotein

position:1035883:-1
position: 1035883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092977-1093309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075506-1075572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065668-1065858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043646-1043895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042689-1042854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035883-1036024:-1:exon

LOC127585300
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585300
note: vimentin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1087201..1088877)
location: region:1087201-1088877:-1
so has part: feature:1087201-1088877:-1:exon
subclass of: SO_0000010

127585300
type: Gene
SIO_000068: ncbigene

position:1087201:-1
position: 1087201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088877:-1
position: 1088877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087201-1088877:-1:exon

LOC127585300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585300
product: vimentin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_052042652.1
SIO_010081: LOC127585300
subclass of: SO_0000673
so part of: LOC127585300
location: complement(1087201..1088877)
location: region:1087201-1088877:-1
so has part: feature:1087201-1088877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087201-1088877:-1:exon

LOC127585300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vimentin-like
translation: MFSGSRTSSPGSATASSACQERQTEMAACEASDKELQDGMQEGKDQIKELNERFAKYINNTVLNLQRKNKELLAELKKLEKEEFNAAEKAYQKDYQDFQARVDEMQNELVLLKLEKDKLKARLEKECQLKREFDRDFQELKKKYEDSGSGLDKLQCQFKLLEAQLAQLKLVRDQERIYWQQKLDNLQNVEPAESTALDLEQALRNMRQEYEQMARRNKEELARYRHKFEENSVPLQKIKKETECYRNAVTDLRLRDEMHKNHLQEKEREIGRIREYNKALEKKIEAHTADFQALLGVKNALEQELSGYKSLLNQVEKKSRDYSNPACITGPPAKAAEELNKMWC
SIO_010081: LOC127585300
subclass of: SO_0000673
so part of: LOC127585300
location: complement(1087708..1088742)
location: region:1087708-1088742:-1
so has part: feature:1087708-1088742:-1:exon

XP_051898612.1
type: Protein
SIO_000068: ncbiprotein

position:1087708:-1
position: 1087708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088742:-1
position: 1088742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087708-1088742:-1:exon

tpm1
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: tpm1
note: tropomyosin 1 (alpha); Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1114075..1152700)
location: region:1114075-1152700:-1
so has part: feature:1114075-1152700:-1:exon
subclass of: SO_0000010

127585355
type: Gene
SIO_000068: ncbigene

position:1114075:-1
position: 1114075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152700:-1
position: 1152700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114075-1152700:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X16
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042789.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152694))
location: region:1114075-1152694:-1
so has part: feature:1152207-1152694:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1152694:-1
position: 1152694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152694:-1:exon

position:1152207:-1
position: 1152207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

position:1151489:-1
position: 1151489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151614:-1
position: 1151614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

position:1138657:-1
position: 1138657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138790:-1
position: 1138790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

position:1132910:-1
position: 1132910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133027:-1
position: 1133027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

position:1132573:-1
position: 1132573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132643:-1
position: 1132643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

position:1132092:-1
position: 1132092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132167:-1
position: 1132167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

position:1130115:-1
position: 1130115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130177:-1
position: 1130177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

position:1129957:-1
position: 1129957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130026:-1
position: 1130026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1114075-1115367:-1:exon

position:1115367:-1
position: 1115367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042785.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152683))
location: region:1114075-1152683:-1
so has part: feature:1152207-1152683:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1152683:-1
position: 1152683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

position:1151770:-1
position: 1151770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151895:-1
position: 1151895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130919-1130994:-1:exon

position:1130919:-1
position: 1130919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130994:-1
position: 1130994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1114075-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042775.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152676))
location: region:1114075-1152676:-1
so has part: feature:1152207-1152676:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1152676:-1
position: 1152676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1114075-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042773.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152670))
location: region:1114075-1152670:-1
so has part: feature:1152207-1152670:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1152670:-1
position: 1152670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1114075-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042781.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144516))
location: region:1114075-1144516:-1
so has part: feature:1144261-1144516:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1144516:-1
position: 1144516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144516:-1:exon

position:1144261:-1
position: 1144261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114075-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042779.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144508))
location: region:1114075-1144508:-1
so has part: feature:1144261-1144508:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1115367:-1:exon

position:1144508:-1
position: 1144508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114075-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042784.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1114075..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144500))
location: region:1114075-1144500:-1
so has part: feature:1144261-1144500:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1114075-1116118:-1:exon

position:1144500:-1
position: 1144500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114075-1116118:-1:exon

position:1116118:-1
position: 1116118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X16
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152572))
location: region:1115285-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898749.1
type: Protein
SIO_000068: ncbiprotein

position:1115285:-1
position: 1115285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152572:-1
position: 1152572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X1
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1115285-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X3
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1115285-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X13
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152572))
location: region:1115285-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X7
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1115285-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898739.1
type: Protein
SIO_000068: ncbiprotein

position:1144392:-1
position: 1144392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X9
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115285..1115367,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1115285-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115285-1115367:-1:exon

XP_051898741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115285-1115367:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_052042791.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115375..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152700))
location: region:1115375-1152700:-1
so has part: feature:1152207-1152700:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115375-1116118:-1:exon

position:1115375:-1
position: 1115375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115375-1116118:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_052042790.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115375..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152692))
location: region:1115375-1152692:-1
so has part: feature:1152207-1152692:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115375-1116118:-1:exon

position:1152692:-1
position: 1152692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115375-1116118:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_052042778.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115375..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152683))
location: region:1115375-1152683:-1
so has part: feature:1152207-1152683:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115375-1116118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115375-1116118:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_052042777.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115375..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152675))
location: region:1115375-1152675:-1
so has part: feature:1152207-1152675:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115375-1116118:-1:exon

position:1152675:-1
position: 1152675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115375-1116118:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_052042783.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1115375..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144522))
location: region:1115375-1144522:-1
so has part: feature:1144261-1144522:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1115375-1116118:-1:exon

position:1144522:-1
position: 1144522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115375-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X17
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152572))
location: region:1116039-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898750.1
type: Protein
SIO_000068: ncbiprotein

position:1116039:-1
position: 1116039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X18
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1152207..1152572))
location: region:1116039-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X5
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1116039-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X6
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1116039-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X12
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1116039-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X11
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDRLYHQLEQNRLLANELKLALNDLSD
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1116039..1116118,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1116039-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1116039-1116118:-1:exon

XP_051898743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116039-1116118:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_052042786.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128326..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152697))
location: region:1128326-1152697:-1
so has part: feature:1152207-1152697:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128326-1128978:-1:exon

position:1128326:-1
position: 1128326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152697:-1
position: 1152697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128326-1128978:-1:exon

position:1128978:-1
position: 1128978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_052042782.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128329..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144523))
location: region:1128329-1144523:-1
so has part: feature:1144261-1144523:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128329-1128978:-1:exon

position:1128329:-1
position: 1128329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144523:-1
position: 1144523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1128329-1128978:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_052042788.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128331..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152690))
location: region:1128331-1152690:-1
so has part: feature:1152207-1152690:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128331-1128978:-1:exon

position:1128331:-1
position: 1128331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152690:-1
position: 1152690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128331-1128978:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_052042776.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128333..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152685))
location: region:1128333-1152685:-1
so has part: feature:1152207-1152685:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128333-1128978:-1:exon

position:1128333:-1
position: 1128333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152685:-1
position: 1152685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128333-1128978:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
transcript id: XM_052042780.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128335..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144516))
location: region:1128335-1144516:-1
so has part: feature:1144261-1144516:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128335-1128978:-1:exon

position:1128335:-1
position: 1128335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1128335-1128978:-1:exon

tpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tpm1
product: tropomyosin 1 (alpha), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_052042774.1
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128338..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152676))
location: region:1128338-1152676:-1
so has part: feature:1152207-1152676:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128338-1128978:-1:exon

position:1128338:-1
position: 1128338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128338-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X2
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1128896-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898734.1
type: Protein
SIO_000068: ncbiprotein

position:1128896:-1
position: 1128896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128896-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X4
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151770..1151895,1152207..1152572))
location: region:1128896-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128896-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X15
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152572))
location: region:1128896-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128896-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X14
translation: MLEPDCHRVAQAATASKKVLNVLRNSVCPPYEGDISEARAGSGALQPCSGTARALCLPLPCLCTLLSVLAVLSPLCKAPPHTAAMEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQFEDEALQLEKQLRTVEDERDKFLEDFNKAEERQLAAEENAAKLEDELVSLQKKLKQTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1151489..1151614,1151770..1151895,1152207..1152572))
location: region:1128896-1152572:-1
so has part: feature:1152207-1152572:-1:exon
so has part: feature:1151770-1151895:-1:exon
so has part: feature:1151489-1151614:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152207-1152572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151770-1151895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151489-1151614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128896-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X8
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1130919..1130994,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1128896-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1130919-1130994:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130919-1130994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1128896-1128978:-1:exon

tpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X10
translation: MVSAMSVDAVRRKIRSLQDQADVAEEKAERLQREVESERQCREQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSESRARRVEEEVRIMDQTLKSLVAAEGKYSQKEDKYEEEIKVLSDRLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: tpm1
subclass of: SO_0000673
so part of: tpm1
location: complement(join(1128896..1128978,1129957..1130026,1130115..1130177,1132092..1132167,1132573..1132643,1132910..1133027,1138657..1138790,1144261..1144392))
location: region:1128896-1144392:-1
so has part: feature:1144261-1144392:-1:exon
so has part: feature:1138657-1138790:-1:exon
so has part: feature:1132910-1133027:-1:exon
so has part: feature:1132573-1132643:-1:exon
so has part: feature:1132092-1132167:-1:exon
so has part: feature:1130115-1130177:-1:exon
so has part: feature:1129957-1130026:-1:exon
so has part: feature:1128896-1128978:-1:exon

XP_051898742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144261-1144392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138657-1138790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132910-1133027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132573-1132643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130115-1130177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129957-1130026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1128896-1128978:-1:exon

tln2b
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: tln2b
note: talin 2b; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1197994..1444079)
location: region:1197994-1444079:-1
so has part: feature:1197994-1444079:-1:exon
subclass of: SO_0000010

127585184
type: Gene
SIO_000068: ncbigene

position:1197994:-1
position: 1197994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444079:-1
position: 1444079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197994-1444079:-1:exon

tln2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tln2b
product: talin 2b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins
transcript id: XM_052042407.1
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
location: complement(join(1197994..1199747,1201237..1201362,1205591..1205773,1206492..1206554,1206648..1206773,1208369..1208493,1220227..1220332,1220629..1220736,1220828..1221013,1225133..1225249,1225780..1225905,1227068..1227251,1228427..1228593,1230647..1230793,1232277..1232396,1233192..1233293,1234510..1234656,1246057..1246227,1246337..1246438,1250018..1250150,1251713..1251894,1254888..1255028,1255940..1256101,1256200..1256343,1259371..1259493,1259595..1259684,1264983..1265076,1267377..1267516,1272504..1272701,1273766..1273885,1274560..1274768,1276042..1276144,1280214..1280342,1280439..1280573,1286939..1287052,1289660..1289773,1295229..1295357,1304444..1304610,1306002..1306296,1309734..1309901,1310445..1310543,1316924..1317132,1320448..1320556,1321766..1321879,1322191..1322371,1323954..1324030,1329936..1330037,1332210..1332365,1332894..1332998,1334456..1334519,1334903..1335030,1335810..1335952,1338727..1338879,1341977..1342106,1344206..1344303,1345321..1345482,1379339..1379389,1443980..1444079))
location: region:1197994-1444079:-1
so has part: feature:1443980-1444079:-1:exon
so has part: feature:1379339-1379389:-1:exon
so has part: feature:1345321-1345482:-1:exon
so has part: feature:1344206-1344303:-1:exon
so has part: feature:1341977-1342106:-1:exon
so has part: feature:1338727-1338879:-1:exon
so has part: feature:1335810-1335952:-1:exon
so has part: feature:1334903-1335030:-1:exon
so has part: feature:1334456-1334519:-1:exon
so has part: feature:1332894-1332998:-1:exon
so has part: feature:1332210-1332365:-1:exon
so has part: feature:1329936-1330037:-1:exon
so has part: feature:1323954-1324030:-1:exon
so has part: feature:1322191-1322371:-1:exon
so has part: feature:1321766-1321879:-1:exon
so has part: feature:1320448-1320556:-1:exon
so has part: feature:1316924-1317132:-1:exon
so has part: feature:1310445-1310543:-1:exon
so has part: feature:1309734-1309901:-1:exon
so has part: feature:1306002-1306296:-1:exon
so has part: feature:1304444-1304610:-1:exon
so has part: feature:1295229-1295357:-1:exon
so has part: feature:1289660-1289773:-1:exon
so has part: feature:1286939-1287052:-1:exon
so has part: feature:1280439-1280573:-1:exon
so has part: feature:1280214-1280342:-1:exon
so has part: feature:1276042-1276144:-1:exon
so has part: feature:1274560-1274768:-1:exon
so has part: feature:1273766-1273885:-1:exon
so has part: feature:1272504-1272701:-1:exon
so has part: feature:1267377-1267516:-1:exon
so has part: feature:1264983-1265076:-1:exon
so has part: feature:1259595-1259684:-1:exon
so has part: feature:1259371-1259493:-1:exon
so has part: feature:1256200-1256343:-1:exon
so has part: feature:1255940-1256101:-1:exon
so has part: feature:1254888-1255028:-1:exon
so has part: feature:1251713-1251894:-1:exon
so has part: feature:1250018-1250150:-1:exon
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tln2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tln2b
product: talin 2b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins
transcript id: XM_052042408.1
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
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so has part: feature:1225133-1225249:-1:exon
so has part: feature:1220828-1221013:-1:exon
so has part: feature:1220629-1220736:-1:exon
so has part: feature:1220227-1220332:-1:exon
so has part: feature:1208369-1208493:-1:exon
so has part: feature:1206648-1206773:-1:exon
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so has part: feature:1205591-1205773:-1:exon
so has part: feature:1201237-1201362:-1:exon
so has part: feature:1197994-1199747:-1:exon

position:1443978:-1
position: 1443978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443862-1443978:-1:exon

position:1443862:-1
position: 1443862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379339-1379389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345321-1345482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344206-1344303:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341977-1342106:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338727-1338879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1335810-1335952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1334903-1335030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334456-1334519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1332894-1332998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1332210-1332365:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1329936-1330037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323954-1324030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1322191-1322371:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321766-1321879:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320448-1320556:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316924-1317132:-1:exon

urn:…
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SIO_000628: feature:1310445-1310543:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1309734-1309901:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1306002-1306296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1304444-1304610:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1295229-1295357:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1289660-1289773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1286939-1287052:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1280439-1280573:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1280214-1280342:-1:exon

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SIO_000300: 27
SIO_000628: feature:1276042-1276144:-1:exon

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SIO_000628: feature:1274560-1274768:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1273766-1273885:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1272504-1272701:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1267377-1267516:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1264983-1265076:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1259595-1259684:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1259371-1259493:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1256200-1256343:-1:exon

urn:…
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SIO_000628: feature:1255940-1256101:-1:exon

urn:…
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SIO_000628: feature:1254888-1255028:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1251713-1251894:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1250018-1250150:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1246337-1246438:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1246057-1246227:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1234510-1234656:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1233192-1233293:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1232277-1232396:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1230647-1230793:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1228427-1228593:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1227068-1227251:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1225780-1225905:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1225133-1225249:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1220828-1221013:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1220629-1220736:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1220227-1220332:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1208369-1208493:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1206648-1206773:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1206492-1206554:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1205591-1205773:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1201237-1201362:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1197994-1199747:-1:exon

tln2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: tln2b
product: talin 2b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins
transcript id: XM_052042409.1
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
location: complement(join(1197994..1199747,1201237..1201362,1205591..1205773,1206492..1206554,1206648..1206773,1208369..1208493,1220227..1220332,1220629..1220736,1220828..1221013,1225133..1225249,1225780..1225905,1227068..1227251,1228427..1228593,1230647..1230793,1232277..1232396,1233192..1233293,1234510..1234656,1246057..1246227,1246337..1246438,1250018..1250150,1251713..1251894,1254888..1255028,1255940..1256101,1256200..1256343,1259371..1259493,1259595..1259684,1264983..1265076,1267377..1267516,1272504..1272701,1273766..1273885,1274560..1274768,1276042..1276144,1280214..1280342,1280439..1280573,1286939..1287052,1289660..1289773,1295229..1295357,1304444..1304610,1306002..1306296,1309734..1309901,1310445..1310543,1316924..1317132,1320448..1320556,1321766..1321879,1322191..1322371,1323954..1324030,1329936..1330037,1332210..1332365,1332894..1332998,1334456..1334519,1334903..1335030,1335810..1335952,1338727..1338879,1341977..1342106,1344206..1344303,1345321..1345482,1379339..1379389,1431998..1432111))
location: region:1197994-1432111:-1
so has part: feature:1431998-1432111:-1:exon
so has part: feature:1379339-1379389:-1:exon
so has part: feature:1345321-1345482:-1:exon
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so has part: feature:1246337-1246438:-1:exon
so has part: feature:1246057-1246227:-1:exon
so has part: feature:1234510-1234656:-1:exon
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so has part: feature:1232277-1232396:-1:exon
so has part: feature:1230647-1230793:-1:exon
so has part: feature:1228427-1228593:-1:exon
so has part: feature:1227068-1227251:-1:exon
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so has part: feature:1225133-1225249:-1:exon
so has part: feature:1220828-1221013:-1:exon
so has part: feature:1220629-1220736:-1:exon
so has part: feature:1220227-1220332:-1:exon
so has part: feature:1208369-1208493:-1:exon
so has part: feature:1206648-1206773:-1:exon
so has part: feature:1206492-1206554:-1:exon
so has part: feature:1205591-1205773:-1:exon
so has part: feature:1201237-1201362:-1:exon
so has part: feature:1197994-1199747:-1:exon

position:1432111:-1
position: 1432111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431998-1432111:-1:exon

position:1431998:-1
position: 1431998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379339-1379389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345321-1345482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344206-1344303:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341977-1342106:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338727-1338879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1335810-1335952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1334903-1335030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334456-1334519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1332894-1332998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1332210-1332365:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1329936-1330037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323954-1324030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1322191-1322371:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321766-1321879:-1:exon

urn:…
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SIO_000628: feature:1320448-1320556:-1:exon

urn:…
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SIO_000628: feature:1316924-1317132:-1:exon

urn:…
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SIO_000628: feature:1310445-1310543:-1:exon

urn:…
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SIO_000628: feature:1309734-1309901:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1306002-1306296:-1:exon

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SIO_000628: feature:1304444-1304610:-1:exon

urn:…
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SIO_000628: feature:1295229-1295357:-1:exon

urn:…
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SIO_000628: feature:1289660-1289773:-1:exon

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SIO_000628: feature:1286939-1287052:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1280439-1280573:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1280214-1280342:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1276042-1276144:-1:exon

urn:…
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SIO_000628: feature:1274560-1274768:-1:exon

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SIO_000628: feature:1273766-1273885:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1272504-1272701:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1267377-1267516:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1264983-1265076:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1259595-1259684:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1259371-1259493:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1256200-1256343:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1255940-1256101:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1254888-1255028:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1251713-1251894:-1:exon

urn:…
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SIO_000628: feature:1250018-1250150:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1246337-1246438:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1246057-1246227:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1234510-1234656:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1233192-1233293:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1232277-1232396:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1230647-1230793:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1228427-1228593:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1227068-1227251:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1225780-1225905:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1225133-1225249:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1220828-1221013:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1220629-1220736:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1220227-1220332:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1208369-1208493:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1206648-1206773:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1206492-1206554:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1205591-1205773:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1201237-1201362:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1197994-1199747:-1:exon

tln2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tln2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2
translation: MVALSLKICVRQCNVIKTMQFEPSTVVYDACRIIRERVPEAQTGQASDYGLFLSDEDPRKGIWLESGRTLDYYMLRNGDVLEYKKKQRPQKVRMLDGAVKTVMIDDSKTVGELLVPICSRIGITNYEEYSLIQDIIEEKKDEGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGIQAHIQFGAHVEHKHKAGFLDLKEFLPKEYIKQRNAEKKIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVMQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKSTILQQQFNKTGKIEHASVALPAVMRPGAGGPENFNTGTMPAPQQQILSGQMHRGHMPPLTSAQQALMGTINSSMQAVQQAQSDLTEIDNLPPLGQDMASKVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKMLAALMDDDVGSGQDLLRAARTLAGAVSDLLKAVEPSSGETRQTVLTAAGSIGQASGDLLRHIGESETDERFQDVLMNLAKAVANAAAMLVLKAKNVAQVAEDTILQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLVEAGKLVDRSVEGCVKACQAATDDGELLKQVSAAASVVSQALNDLLQHVRQYASRGEPIGRYDQATDTIMTVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAESDVDNSKKLLAAAKLLADSTARMVEAAKGAAANPENQDQQQKLREAAEGLRVVTNSAAQNAIKKKLINRLENAAKQAAAAATQTIAASQNASSSNKNTAAQQQLVQSCKAVADHIPQLVQGVRGSQADPENLSAQLALIIASQNFLQPGSKMVSSAKAAVPTVTDQAAAMQLGQCAKNLATSLAELRTSVQKAHEACGPMEIDSALQSVQTLRNELQDAKMAAVDGQLKPLPGETLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGIAARETAQALKTLASAARGVAASTDSPPAQSSMLDTARDVMDGSALLIQEAKQTLASPGDAESQQRLAQVAKAVSHSLNNCVNCLPGQKDVDMALKSIGESSKKLLVDSLPPSTKSFQEAQSELNQAAADLNQSAGEVVHASRGTSRQLAAASGKFSEDFDEFLDAGIEMAGQAQTKEGQIQVVGNLKNISMASSKLLLAAKSLSVDPAAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNDPVSDLSYFDCIESVMENSKVLGEAMAGISQKAKTGDLPAFGDSVGIASKALCGLTEAAAQAGYLVGISDPNSQAGHQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENREKCRLATSPLIEAVENLTAFASNPEFVSIPAQIGAEGAQAQEPILSAARSMLDSSSSLIKSARSLAINPKDPPTWSILAGHSRTVSDSIKSLITSIRDKAPGQRECDCSIDNINKCIREIEQASLAAVSQNLPTRDDISLEALQEQMSSTVQEIGHLIDPITTAARGEAAQLGHKVTQLASYFEPLTLASVGVASKVLDHQQQMTVLDQTKTLAESALQMLYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASDIGMVGGMVDAIADAMNRLDEGTPPEPEGSFVDYQTTMVKYSKAIAVTAQEMMSKSVTCPEELGGLASQVTTDYSHLAHQGRLATVTADTEEIGFQIKTRVQDLGHGCIFLVQKAGAVQISPSDSFTKRELIECTRAVTEKVSLVLSALQAGNRGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
location: complement(join(1199619..1199747,1201237..1201362,1205591..1205773,1206492..1206554,1206648..1206773,1208369..1208493,1220227..1220332,1220629..1220736,1220828..1221013,1225133..1225249,1225780..1225905,1227068..1227251,1228427..1228593,1230647..1230793,1232277..1232396,1233192..1233293,1234510..1234656,1246057..1246227,1246337..1246438,1250018..1250150,1251713..1251894,1254888..1255028,1255940..1256101,1256200..1256343,1259371..1259493,1259595..1259684,1264983..1265076,1267377..1267516,1272504..1272701,1273766..1273885,1274560..1274768,1276042..1276144,1280214..1280342,1280439..1280573,1286939..1287052,1289660..1289773,1295229..1295357,1304444..1304610,1306002..1306296,1309734..1309901,1310445..1310543,1316924..1317132,1320448..1320556,1321766..1321879,1322191..1322371,1323954..1324030,1329936..1330037,1332210..1332365,1332894..1332998,1334456..1334519,1334903..1335030,1335810..1335952,1338727..1338879,1341977..1342106,1344206..1344303,1345321..1345456))
location: region:1199619-1345456:-1
so has part: feature:1345321-1345456:-1:exon
so has part: feature:1344206-1344303:-1:exon
so has part: feature:1341977-1342106:-1:exon
so has part: feature:1338727-1338879:-1:exon
so has part: feature:1335810-1335952:-1:exon
so has part: feature:1334903-1335030:-1:exon
so has part: feature:1334456-1334519:-1:exon
so has part: feature:1332894-1332998:-1:exon
so has part: feature:1332210-1332365:-1:exon
so has part: feature:1329936-1330037:-1:exon
so has part: feature:1323954-1324030:-1:exon
so has part: feature:1322191-1322371:-1:exon
so has part: feature:1321766-1321879:-1:exon
so has part: feature:1320448-1320556:-1:exon
so has part: feature:1316924-1317132:-1:exon
so has part: feature:1310445-1310543:-1:exon
so has part: feature:1309734-1309901:-1:exon
so has part: feature:1306002-1306296:-1:exon
so has part: feature:1304444-1304610:-1:exon
so has part: feature:1295229-1295357:-1:exon
so has part: feature:1289660-1289773:-1:exon
so has part: feature:1286939-1287052:-1:exon
so has part: feature:1280439-1280573:-1:exon
so has part: feature:1280214-1280342:-1:exon
so has part: feature:1276042-1276144:-1:exon
so has part: feature:1274560-1274768:-1:exon
so has part: feature:1273766-1273885:-1:exon
so has part: feature:1272504-1272701:-1:exon
so has part: feature:1267377-1267516:-1:exon
so has part: feature:1264983-1265076:-1:exon
so has part: feature:1259595-1259684:-1:exon
so has part: feature:1259371-1259493:-1:exon
so has part: feature:1256200-1256343:-1:exon
so has part: feature:1255940-1256101:-1:exon
so has part: feature:1254888-1255028:-1:exon
so has part: feature:1251713-1251894:-1:exon
so has part: feature:1250018-1250150:-1:exon
so has part: feature:1246337-1246438:-1:exon
so has part: feature:1246057-1246227:-1:exon
so has part: feature:1234510-1234656:-1:exon
so has part: feature:1233192-1233293:-1:exon
so has part: feature:1232277-1232396:-1:exon
so has part: feature:1230647-1230793:-1:exon
so has part: feature:1228427-1228593:-1:exon
so has part: feature:1227068-1227251:-1:exon
so has part: feature:1225780-1225905:-1:exon
so has part: feature:1225133-1225249:-1:exon
so has part: feature:1220828-1221013:-1:exon
so has part: feature:1220629-1220736:-1:exon
so has part: feature:1220227-1220332:-1:exon
so has part: feature:1208369-1208493:-1:exon
so has part: feature:1206648-1206773:-1:exon
so has part: feature:1206492-1206554:-1:exon
so has part: feature:1205591-1205773:-1:exon
so has part: feature:1201237-1201362:-1:exon
so has part: feature:1199619-1199747:-1:exon

XP_051898367.1
type: Protein
SIO_000068: ncbiprotein

position:1199619:-1
position: 1199619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345456:-1
position: 1345456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345321-1345456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344206-1344303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341977-1342106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338727-1338879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335810-1335952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1334903-1335030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334456-1334519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332894-1332998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332210-1332365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1329936-1330037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1323954-1324030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322191-1322371:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321766-1321879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1320448-1320556:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1316924-1317132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310445-1310543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1309734-1309901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1306002-1306296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1304444-1304610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295229-1295357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1289660-1289773:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286939-1287052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1280439-1280573:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1280214-1280342:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1276042-1276144:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1274560-1274768:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1273766-1273885:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1272504-1272701:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1267377-1267516:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1264983-1265076:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1259595-1259684:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1259371-1259493:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1256200-1256343:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1255940-1256101:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1254888-1255028:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1251713-1251894:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1250018-1250150:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1246337-1246438:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1246057-1246227:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1234510-1234656:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1233192-1233293:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1232277-1232396:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1230647-1230793:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1228427-1228593:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1227068-1227251:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1225780-1225905:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1225133-1225249:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1220828-1221013:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1220629-1220736:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1220227-1220332:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1208369-1208493:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1206648-1206773:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1206492-1206554:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1205591-1205773:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1201237-1201362:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1199619-1199747:-1:exon

tln2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tln2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2
translation: MVALSLKICVRQCNVIKTMQFEPSTVVYDACRIIRERVPEAQTGQASDYGLFLSDEDPRKGIWLESGRTLDYYMLRNGDVLEYKKKQRPQKVRMLDGAVKTVMIDDSKTVGELLVPICSRIGITNYEEYSLIQDIIEEKKDEGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGIQAHIQFGAHVEHKHKAGFLDLKEFLPKEYIKQRNAEKKIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVMQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKSTILQQQFNKTGKIEHASVALPAVMRPGAGGPENFNTGTMPAPQQQILSGQMHRGHMPPLTSAQQALMGTINSSMQAVQQAQSDLTEIDNLPPLGQDMASKVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKMLAALMDDDVGSGQDLLRAARTLAGAVSDLLKAVEPSSGETRQTVLTAAGSIGQASGDLLRHIGESETDERFQDVLMNLAKAVANAAAMLVLKAKNVAQVAEDTILQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLVEAGKLVDRSVEGCVKACQAATDDGELLKQVSAAASVVSQALNDLLQHVRQYASRGEPIGRYDQATDTIMTVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAESDVDNSKKLLAAAKLLADSTARMVEAAKGAAANPENQDQQQKLREAAEGLRVVTNSAAQNAIKKKLINRLENAAKQAAAAATQTIAASQNASSSNKNTAAQQQLVQSCKAVADHIPQLVQGVRGSQADPENLSAQLALIIASQNFLQPGSKMVSSAKAAVPTVTDQAAAMQLGQCAKNLATSLAELRTSVQKAHEACGPMEIDSALQSVQTLRNELQDAKMAAVDGQLKPLPGETLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGIAARETAQALKTLASAARGVAASTDSPPAQSSMLDTARDVMDGSALLIQEAKQTLASPGDAESQQRLAQVAKAVSHSLNNCVNCLPGQKDVDMALKSIGESSKKLLVDSLPPSTKSFQEAQSELNQAAADLNQSAGEVVHASRGTSRQLAAASGKFSEDFDEFLDAGIEMAGQAQTKEGQIQVVGNLKNISMASSKLLLAAKSLSVDPAAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNDPVSDLSYFDCIESVMENSKVLGEAMAGISQKAKTGDLPAFGDSVGIASKALCGLTEAAAQAGYLVGISDPNSQAGHQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENREKCRLATSPLIEAVENLTAFASNPEFVSIPAQIGAEGAQAQEPILSAARSMLDSSSSLIKSARSLAINPKDPPTWSILAGHSRTVSDSIKSLITSIRDKAPGQRECDCSIDNINKCIREIEQASLAAVSQNLPTRDDISLEALQEQMSSTVQEIGHLIDPITTAARGEAAQLGHKVTQLASYFEPLTLASVGVASKVLDHQQQMTVLDQTKTLAESALQMLYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASDIGMVGGMVDAIADAMNRLDEGTPPEPEGSFVDYQTTMVKYSKAIAVTAQEMMSKSVTCPEELGGLASQVTTDYSHLAHQGRLATVTADTEEIGFQIKTRVQDLGHGCIFLVQKAGAVQISPSDSFTKRELIECTRAVTEKVSLVLSALQAGNRGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
location: complement(join(1199619..1199747,1201237..1201362,1205591..1205773,1206492..1206554,1206648..1206773,1208369..1208493,1220227..1220332,1220629..1220736,1220828..1221013,1225133..1225249,1225780..1225905,1227068..1227251,1228427..1228593,1230647..1230793,1232277..1232396,1233192..1233293,1234510..1234656,1246057..1246227,1246337..1246438,1250018..1250150,1251713..1251894,1254888..1255028,1255940..1256101,1256200..1256343,1259371..1259493,1259595..1259684,1264983..1265076,1267377..1267516,1272504..1272701,1273766..1273885,1274560..1274768,1276042..1276144,1280214..1280342,1280439..1280573,1286939..1287052,1289660..1289773,1295229..1295357,1304444..1304610,1306002..1306296,1309734..1309901,1310445..1310543,1316924..1317132,1320448..1320556,1321766..1321879,1322191..1322371,1323954..1324030,1329936..1330037,1332210..1332365,1332894..1332998,1334456..1334519,1334903..1335030,1335810..1335952,1338727..1338879,1341977..1342106,1344206..1344303,1345321..1345456))
location: region:1199619-1345456:-1
so has part: feature:1345321-1345456:-1:exon
so has part: feature:1344206-1344303:-1:exon
so has part: feature:1341977-1342106:-1:exon
so has part: feature:1338727-1338879:-1:exon
so has part: feature:1335810-1335952:-1:exon
so has part: feature:1334903-1335030:-1:exon
so has part: feature:1334456-1334519:-1:exon
so has part: feature:1332894-1332998:-1:exon
so has part: feature:1332210-1332365:-1:exon
so has part: feature:1329936-1330037:-1:exon
so has part: feature:1323954-1324030:-1:exon
so has part: feature:1322191-1322371:-1:exon
so has part: feature:1321766-1321879:-1:exon
so has part: feature:1320448-1320556:-1:exon
so has part: feature:1316924-1317132:-1:exon
so has part: feature:1310445-1310543:-1:exon
so has part: feature:1309734-1309901:-1:exon
so has part: feature:1306002-1306296:-1:exon
so has part: feature:1304444-1304610:-1:exon
so has part: feature:1295229-1295357:-1:exon
so has part: feature:1289660-1289773:-1:exon
so has part: feature:1286939-1287052:-1:exon
so has part: feature:1280439-1280573:-1:exon
so has part: feature:1280214-1280342:-1:exon
so has part: feature:1276042-1276144:-1:exon
so has part: feature:1274560-1274768:-1:exon
so has part: feature:1273766-1273885:-1:exon
so has part: feature:1272504-1272701:-1:exon
so has part: feature:1267377-1267516:-1:exon
so has part: feature:1264983-1265076:-1:exon
so has part: feature:1259595-1259684:-1:exon
so has part: feature:1259371-1259493:-1:exon
so has part: feature:1256200-1256343:-1:exon
so has part: feature:1255940-1256101:-1:exon
so has part: feature:1254888-1255028:-1:exon
so has part: feature:1251713-1251894:-1:exon
so has part: feature:1250018-1250150:-1:exon
so has part: feature:1246337-1246438:-1:exon
so has part: feature:1246057-1246227:-1:exon
so has part: feature:1234510-1234656:-1:exon
so has part: feature:1233192-1233293:-1:exon
so has part: feature:1232277-1232396:-1:exon
so has part: feature:1230647-1230793:-1:exon
so has part: feature:1228427-1228593:-1:exon
so has part: feature:1227068-1227251:-1:exon
so has part: feature:1225780-1225905:-1:exon
so has part: feature:1225133-1225249:-1:exon
so has part: feature:1220828-1221013:-1:exon
so has part: feature:1220629-1220736:-1:exon
so has part: feature:1220227-1220332:-1:exon
so has part: feature:1208369-1208493:-1:exon
so has part: feature:1206648-1206773:-1:exon
so has part: feature:1206492-1206554:-1:exon
so has part: feature:1205591-1205773:-1:exon
so has part: feature:1201237-1201362:-1:exon
so has part: feature:1199619-1199747:-1:exon

XP_051898368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1345321-1345456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344206-1344303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341977-1342106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338727-1338879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335810-1335952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1334903-1335030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334456-1334519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332894-1332998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332210-1332365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1329936-1330037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1323954-1324030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322191-1322371:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321766-1321879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1320448-1320556:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1316924-1317132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310445-1310543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1309734-1309901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1306002-1306296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1304444-1304610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295229-1295357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1289660-1289773:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286939-1287052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1280439-1280573:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1280214-1280342:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1276042-1276144:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1274560-1274768:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1273766-1273885:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1272504-1272701:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1267377-1267516:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1264983-1265076:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1259595-1259684:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1259371-1259493:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1256200-1256343:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1255940-1256101:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1254888-1255028:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1251713-1251894:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1250018-1250150:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1246337-1246438:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1246057-1246227:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1234510-1234656:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1233192-1233293:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1232277-1232396:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1230647-1230793:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1228427-1228593:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1227068-1227251:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1225780-1225905:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1225133-1225249:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1220828-1221013:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1220629-1220736:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1220227-1220332:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1208369-1208493:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1206648-1206773:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1206492-1206554:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1205591-1205773:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1201237-1201362:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1199619-1199747:-1:exon

tln2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: tln2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2
translation: MVALSLKICVRQCNVIKTMQFEPSTVVYDACRIIRERVPEAQTGQASDYGLFLSDEDPRKGIWLESGRTLDYYMLRNGDVLEYKKKQRPQKVRMLDGAVKTVMIDDSKTVGELLVPICSRIGITNYEEYSLIQDIIEEKKDEGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGIQAHIQFGAHVEHKHKAGFLDLKEFLPKEYIKQRNAEKKIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVMQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKSTILQQQFNKTGKIEHASVALPAVMRPGAGGPENFNTGTMPAPQQQILSGQMHRGHMPPLTSAQQALMGTINSSMQAVQQAQSDLTEIDNLPPLGQDMASKVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKMLAALMDDDVGSGQDLLRAARTLAGAVSDLLKAVEPSSGETRQTVLTAAGSIGQASGDLLRHIGESETDERFQDVLMNLAKAVANAAAMLVLKAKNVAQVAEDTILQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLVEAGKLVDRSVEGCVKACQAATDDGELLKQVSAAASVVSQALNDLLQHVRQYASRGEPIGRYDQATDTIMTVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAESDVDNSKKLLAAAKLLADSTARMVEAAKGAAANPENQDQQQKLREAAEGLRVVTNSAAQNAIKKKLINRLENAAKQAAAAATQTIAASQNASSSNKNTAAQQQLVQSCKAVADHIPQLVQGVRGSQADPENLSAQLALIIASQNFLQPGSKMVSSAKAAVPTVTDQAAAMQLGQCAKNLATSLAELRTSVQKAHEACGPMEIDSALQSVQTLRNELQDAKMAAVDGQLKPLPGETLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGIAARETAQALKTLASAARGVAASTDSPPAQSSMLDTARDVMDGSALLIQEAKQTLASPGDAESQQRLAQVAKAVSHSLNNCVNCLPGQKDVDMALKSIGESSKKLLVDSLPPSTKSFQEAQSELNQAAADLNQSAGEVVHASRGTSRQLAAASGKFSEDFDEFLDAGIEMAGQAQTKEGQIQVVGNLKNISMASSKLLLAAKSLSVDPAAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNDPVSDLSYFDCIESVMENSKVLGEAMAGISQKAKTGDLPAFGDSVGIASKALCGLTEAAAQAGYLVGISDPNSQAGHQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENREKCRLATSPLIEAVENLTAFASNPEFVSIPAQIGAEGAQAQEPILSAARSMLDSSSSLIKSARSLAINPKDPPTWSILAGHSRTVSDSIKSLITSIRDKAPGQRECDCSIDNINKCIREIEQASLAAVSQNLPTRDDISLEALQEQMSSTVQEIGHLIDPITTAARGEAAQLGHKVTQLASYFEPLTLASVGVASKVLDHQQQMTVLDQTKTLAESALQMLYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASDIGMVGGMVDAIADAMNRLDEGTPPEPEGSFVDYQTTMVKYSKAIAVTAQEMMSKSVTCPEELGGLASQVTTDYSHLAHQGRLATVTADTEEIGFQIKTRVQDLGHGCIFLVQKAGAVQISPSDSFTKRELIECTRAVTEKVSLVLSALQAGNRGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: tln2b
subclass of: SO_0000673
so part of: tln2b
location: complement(join(1199619..1199747,1201237..1201362,1205591..1205773,1206492..1206554,1206648..1206773,1208369..1208493,1220227..1220332,1220629..1220736,1220828..1221013,1225133..1225249,1225780..1225905,1227068..1227251,1228427..1228593,1230647..1230793,1232277..1232396,1233192..1233293,1234510..1234656,1246057..1246227,1246337..1246438,1250018..1250150,1251713..1251894,1254888..1255028,1255940..1256101,1256200..1256343,1259371..1259493,1259595..1259684,1264983..1265076,1267377..1267516,1272504..1272701,1273766..1273885,1274560..1274768,1276042..1276144,1280214..1280342,1280439..1280573,1286939..1287052,1289660..1289773,1295229..1295357,1304444..1304610,1306002..1306296,1309734..1309901,1310445..1310543,1316924..1317132,1320448..1320556,1321766..1321879,1322191..1322371,1323954..1324030,1329936..1330037,1332210..1332365,1332894..1332998,1334456..1334519,1334903..1335030,1335810..1335952,1338727..1338879,1341977..1342106,1344206..1344303,1345321..1345456))
location: region:1199619-1345456:-1
so has part: feature:1345321-1345456:-1:exon
so has part: feature:1344206-1344303:-1:exon
so has part: feature:1341977-1342106:-1:exon
so has part: feature:1338727-1338879:-1:exon
so has part: feature:1335810-1335952:-1:exon
so has part: feature:1334903-1335030:-1:exon
so has part: feature:1334456-1334519:-1:exon
so has part: feature:1332894-1332998:-1:exon
so has part: feature:1332210-1332365:-1:exon
so has part: feature:1329936-1330037:-1:exon
so has part: feature:1323954-1324030:-1:exon
so has part: feature:1322191-1322371:-1:exon
so has part: feature:1321766-1321879:-1:exon
so has part: feature:1320448-1320556:-1:exon
so has part: feature:1316924-1317132:-1:exon
so has part: feature:1310445-1310543:-1:exon
so has part: feature:1309734-1309901:-1:exon
so has part: feature:1306002-1306296:-1:exon
so has part: feature:1304444-1304610:-1:exon
so has part: feature:1295229-1295357:-1:exon
so has part: feature:1289660-1289773:-1:exon
so has part: feature:1286939-1287052:-1:exon
so has part: feature:1280439-1280573:-1:exon
so has part: feature:1280214-1280342:-1:exon
so has part: feature:1276042-1276144:-1:exon
so has part: feature:1274560-1274768:-1:exon
so has part: feature:1273766-1273885:-1:exon
so has part: feature:1272504-1272701:-1:exon
so has part: feature:1267377-1267516:-1:exon
so has part: feature:1264983-1265076:-1:exon
so has part: feature:1259595-1259684:-1:exon
so has part: feature:1259371-1259493:-1:exon
so has part: feature:1256200-1256343:-1:exon
so has part: feature:1255940-1256101:-1:exon
so has part: feature:1254888-1255028:-1:exon
so has part: feature:1251713-1251894:-1:exon
so has part: feature:1250018-1250150:-1:exon
so has part: feature:1246337-1246438:-1:exon
so has part: feature:1246057-1246227:-1:exon
so has part: feature:1234510-1234656:-1:exon
so has part: feature:1233192-1233293:-1:exon
so has part: feature:1232277-1232396:-1:exon
so has part: feature:1230647-1230793:-1:exon
so has part: feature:1228427-1228593:-1:exon
so has part: feature:1227068-1227251:-1:exon
so has part: feature:1225780-1225905:-1:exon
so has part: feature:1225133-1225249:-1:exon
so has part: feature:1220828-1221013:-1:exon
so has part: feature:1220629-1220736:-1:exon
so has part: feature:1220227-1220332:-1:exon
so has part: feature:1208369-1208493:-1:exon
so has part: feature:1206648-1206773:-1:exon
so has part: feature:1206492-1206554:-1:exon
so has part: feature:1205591-1205773:-1:exon
so has part: feature:1201237-1201362:-1:exon
so has part: feature:1199619-1199747:-1:exon

XP_051898369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1345321-1345456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344206-1344303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341977-1342106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338727-1338879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335810-1335952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1334903-1335030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334456-1334519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332894-1332998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332210-1332365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1329936-1330037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1323954-1324030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322191-1322371:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321766-1321879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1320448-1320556:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1316924-1317132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310445-1310543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1309734-1309901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1306002-1306296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1304444-1304610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295229-1295357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1289660-1289773:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286939-1287052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1280439-1280573:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1280214-1280342:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1276042-1276144:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1274560-1274768:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1273766-1273885:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1272504-1272701:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1267377-1267516:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1264983-1265076:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1259595-1259684:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1259371-1259493:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1256200-1256343:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1255940-1256101:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1254888-1255028:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1251713-1251894:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1250018-1250150:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1246337-1246438:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1246057-1246227:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1234510-1234656:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1233192-1233293:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1232277-1232396:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1230647-1230793:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1228427-1228593:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1227068-1227251:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1225780-1225905:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1225133-1225249:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1220828-1221013:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1220629-1220736:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1220227-1220332:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1208369-1208493:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1206648-1206773:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1206492-1206554:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1205591-1205773:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1201237-1201362:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1199619-1199747:-1:exon

LOC127585157
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585157
note: translation initiation factor IF-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1443170..1456024
location: region:1443170-1456024:1
so has part: feature:1443170-1456024:1:exon
subclass of: SO_0000010

127585157
type: Gene
SIO_000068: ncbigene

position:1443170:1
position: 1443170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456024:1
position: 1456024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443170-1456024:1:exon

LOC127585157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585157
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052042371.1
SIO_010081: LOC127585157
subclass of: SO_0000673
so part of: LOC127585157
location: join(1443170..1443543,1443816..1444827,1452650..1452807,1455930..1456024)
location: region:1443170-1456024:1
so has part: feature:1443170-1443543:1:exon
so has part: feature:1443816-1444827:1:exon
so has part: feature:1452650-1452807:1:exon
so has part: feature:1455930-1456024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1443170-1443543:1:exon

position:1443543:1
position: 1443543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443816-1444827:1:exon

position:1443816:1
position: 1443816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444827:1
position: 1444827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452650-1452807:1:exon

position:1452650:1
position: 1452650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452807:1
position: 1452807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1455930-1456024:1:exon

position:1455930:1
position: 1455930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127585157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MAASHHPTTRTTNGGQLFPSPAAARPLAPAQPGEGEPRISTRPSDNQLTPRLPSPPYVQPDGAGCAPVPLPHTMPHIHPARSTQPAKLSPAAHSAERERETIISSEDALGNMAAPNLLKPLSGVTNTWKREVTTRSGIAHLHADILHRFFTDQQILQADARVKAEERGSRRPGAPHEHSHWAAGAGSRSLSIPGRAVEGGRGPGPQPPPATLAPAPLRPEKRHHSGTPHSGGERSPSPVLNGGVAVGGSWSRSGFPPNPGGLPAGASRSPHPGGLPFPPPHPPGGSRPGCPTAPPRGLPAGASPPHPGGLPFPPPSPGGRPAPAHLPRGGPGRGVLPHPGVSRPPPAIPRGASRSCPPPPGGVPLLPGGGSWPGRPAPSPGGFCSPRGLPAGVSPLPPRPGPDPSAPSVHGLGCAELGWTSGVTAGGSLPAEIIGLDANGSIVSARGAVCLRPELAPSESTIQATADGALWNKEQTAGGTQWLEQHLWRQRDGRCFRTRLHTGRREHYGYQTGVRSHYTVTGSHELGTSGQ
SIO_010081: LOC127585157
subclass of: SO_0000673
so part of: LOC127585157
location: join(1443170..1443543,1443816..1444827,1452650..1452807,1455930..1455981)
location: region:1443170-1455981:1
so has part: feature:1443170-1443543:1:exon
so has part: feature:1443816-1444827:1:exon
so has part: feature:1452650-1452807:1:exon
so has part: feature:1455930-1455981:1:exon

XP_051898331.1
type: Protein
SIO_000068: ncbiprotein

position:1455981:1
position: 1455981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443170-1443543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443816-1444827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452650-1452807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1455930-1455981:1:exon

vps13c
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: vps13c
note: vacuolar protein sorting 13 homolog C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1527156..1810544
location: region:1527156-1810544:1
so has part: feature:1527156-1810544:1:exon
subclass of: SO_0000010

127585152
type: Gene
SIO_000068: ncbigene

position:1527156:1
position: 1527156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1810544:1
position: 1810544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527156-1810544:1:exon

vps13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: vps13c
product: vacuolar protein sorting 13 homolog C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 9 Proteins
transcript id: XM_052042364.1
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527156..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1794610..1794941)
location: region:1527156-1794941:1
so has part: feature:1527156-1527497:1:exon
so has part: feature:1532571-1532614:1:exon
so has part: feature:1543102-1543144:1:exon
so has part: feature:1549074-1549169:1:exon
so has part: feature:1551815-1551916:1:exon
so has part: feature:1572827-1572936:1:exon
so has part: feature:1573129-1573188:1:exon
so has part: feature:1576879-1576938:1:exon
so has part: feature:1581095-1581175:1:exon
so has part: feature:1583811-1583868:1:exon
so has part: feature:1584689-1584816:1:exon
so has part: feature:1587465-1587571:1:exon
so has part: feature:1592331-1592502:1:exon
so has part: feature:1596836-1596898:1:exon
so has part: feature:1597932-1598061:1:exon
so has part: feature:1606337-1606431:1:exon
so has part: feature:1609642-1609784:1:exon
so has part: feature:1611963-1612155:1:exon
so has part: feature:1613975-1614089:1:exon
so has part: feature:1614224-1614360:1:exon
so has part: feature:1618377-1618506:1:exon
so has part: feature:1619965-1620082:1:exon
so has part: feature:1621665-1621800:1:exon
so has part: feature:1622851-1622929:1:exon
so has part: feature:1625435-1625604:1:exon
so has part: feature:1629849-1630002:1:exon
so has part: feature:1635536-1635615:1:exon
so has part: feature:1636200-1636259:1:exon
so has part: feature:1639787-1639952:1:exon
so has part: feature:1640786-1640893:1:exon
so has part: feature:1644218-1644321:1:exon
so has part: feature:1646200-1646367:1:exon
so has part: feature:1647533-1647837:1:exon
so has part: feature:1650098-1650245:1:exon
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type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:1768163-1768276:1:exon

position:1768163:1
position: 1768163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768276:1
position: 1768276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:1769054-1769193:1:exon

position:1769054:1
position: 1769054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1769193:1
position: 1769193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:1770427-1770508:1:exon

position:1770427:1
position: 1770427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770508:1
position: 1770508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:1771915-1772028:1:exon

position:1771915:1
position: 1771915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772028:1
position: 1772028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:1772123-1772198:1:exon

position:1772123:1
position: 1772123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772198:1
position: 1772198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:1772364-1772527:1:exon

position:1772364:1
position: 1772364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772527:1
position: 1772527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:1777667-1777712:1:exon

position:1777667:1
position: 1777667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777712:1
position: 1777712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:1786869-1786992:1:exon

position:1786869:1
position: 1786869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786992:1
position: 1786992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 79
SIO_000628: feature:1788655-1788769:1:exon

position:1788655:1
position: 1788655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788769:1
position: 1788769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 80
SIO_000628: feature:1794610-1794941:1:exon

position:1794610:1
position: 1794610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: vps13c
product: vacuolar protein sorting 13 homolog C, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042365.1
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527157..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1559830..1559892,1566624..1566683,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1801942..1802033,1803825..1803945,1805410..1805499,1810143..1810544)
location: region:1527157-1810544:1
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so has part: feature:1700065-1700234:1:exon
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so has part: feature:1707118-1707483:1:exon
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so has part: feature:1714428-1714583:1:exon
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so has part: feature:1722809-1722930:1:exon
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so has part: feature:1724916-1725299:1:exon
so has part: feature:1728249-1728353:1:exon
so has part: feature:1729845-1730009:1:exon
so has part: feature:1732391-1732519:1:exon
so has part: feature:1739667-1739800:1:exon
so has part: feature:1744739-1744865:1:exon
so has part: feature:1747782-1748017:1:exon

position:1527157:1
position: 1527157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527157-1527497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532571-1532614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543102-1543144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1549074-1549169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551815-1551916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559830-1559892:1:exon

position:1559830:1
position: 1559830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559892:1
position: 1559892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1566624-1566683:1:exon

position:1566624:1
position: 1566624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566683:1
position: 1566683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1572827-1572936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1573129-1573188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1576879-1576938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1581095-1581175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583811-1583868:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1584689-1584816:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587465-1587571:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1592331-1592502:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1596836-1596898:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1597932-1598061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1606337-1606431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1609642-1609784:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1611963-1612155:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1613975-1614089:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1614224-1614360:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1618377-1618506:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1619965-1620082:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1621665-1621800:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1622851-1622929:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1625435-1625604:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1629849-1630002:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1635536-1635615:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1636200-1636259:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1639787-1639952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1640786-1640893:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1644218-1644321:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1646200-1646367:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1647533-1647837:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1650098-1650245:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1650695-1650803:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1652011-1652156:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1654384-1654540:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1657458-1657537:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1661234-1661293:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1676238-1676394:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1677796-1677909:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1678767-1678870:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1679889-1680056:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1684174-1684478:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1688858-1689005:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1695634-1695781:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1698565-1698698:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1700065-1700234:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1701726-1701958:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1703085-1703317:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1706718-1706810:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1707118-1707483:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1713257-1713346:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1714428-1714583:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1716161-1716425:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1722068-1722228:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1722809-1722930:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1723981-1724278:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1724916-1725299:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1728249-1728353:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1729845-1730009:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1732391-1732519:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1739667-1739800:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1744739-1744865:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1747782-1748017:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1761491-1761635:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1762400-1762534:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1763551-1763632:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1763715-1763784:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1765219-1765330:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1768163-1768276:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1769054-1769193:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1770427-1770508:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1771915-1772028:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1772123-1772198:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1772364-1772527:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1777667-1777712:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1786869-1786992:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1788655-1788769:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1801942-1802033:1:exon

position:1801942:1
position: 1801942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802033:1
position: 1802033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 83
SIO_000628: feature:1803825-1803945:1:exon

position:1803825:1
position: 1803825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803945:1
position: 1803945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 84
SIO_000628: feature:1805410-1805499:1:exon

position:1805410:1
position: 1805410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805499:1
position: 1805499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 85
SIO_000628: feature:1810143-1810544:1:exon

position:1810143:1
position: 1810143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: vps13c
product: vacuolar protein sorting 13 homolog C, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042363.1
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527157..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1801942..1802033,1803825..1803945,1805410..1805499,1810143..1810544)
location: region:1527157-1810544:1
so has part: feature:1527157-1527497:1:exon
so has part: feature:1532571-1532614:1:exon
so has part: feature:1543102-1543144:1:exon
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so has part: feature:1613975-1614089:1:exon
so has part: feature:1614224-1614360:1:exon
so has part: feature:1618377-1618506:1:exon
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so has part: feature:1621665-1621800:1:exon
so has part: feature:1622851-1622929:1:exon
so has part: feature:1625435-1625604:1:exon
so has part: feature:1629849-1630002:1:exon
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so has part: feature:1636200-1636259:1:exon
so has part: feature:1639787-1639952:1:exon
so has part: feature:1640786-1640893:1:exon
so has part: feature:1644218-1644321:1:exon
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so has part: feature:1747782-1748017:1:exon
so has part: feature:1761491-1761635:1:exon
so has part: feature:1762400-1762534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1527157-1527497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532571-1532614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543102-1543144:1:exon

urn:…
SIO_000300: 4
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urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:1573129-1573188:1:exon

urn:…
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SIO_000628: feature:1576879-1576938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1581095-1581175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1583811-1583868:1:exon

urn:…
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SIO_000628: feature:1584689-1584816:1:exon

urn:…
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urn:…
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SIO_000628: feature:1592331-1592502:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1596836-1596898:1:exon

urn:…
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1609642-1609784:1:exon

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SIO_000628: feature:1679889-1680056:1:exon

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SIO_000628: feature:1688858-1689005:1:exon

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SIO_000628: feature:1701726-1701958:1:exon

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SIO_000628: feature:1713257-1713346:1:exon

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SIO_000628: feature:1722809-1722930:1:exon

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SIO_000628: feature:1723981-1724278:1:exon

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SIO_000628: feature:1724916-1725299:1:exon

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SIO_000628: feature:1765219-1765330:1:exon

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SIO_000300: 72
SIO_000628: feature:1769054-1769193:1:exon

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SIO_000628: feature:1770427-1770508:1:exon

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SIO_000628: feature:1771915-1772028:1:exon

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SIO_000628: feature:1772123-1772198:1:exon

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SIO_000300: 77
SIO_000628: feature:1777667-1777712:1:exon

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SIO_000300: 78
SIO_000628: feature:1786869-1786992:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1788655-1788769:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1801942-1802033:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1803825-1803945:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1805410-1805499:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1810143-1810544:1:exon

vps13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: vps13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intermembrane lipid transfer protein VPS13C isoform X3
translation: MVFEALVADLLNRFLGDYVENLDKSQLKLGIWGGNVVLDNLQIKENALNDFDVPFKIKAGQIDKLTLKIPWKNLYSEAVVATLDGLHLLVVPEGSIQYDAEKEEKQLQENKQKELLRIEEALEKAARKGASSGEFLFSLESYVYKDIKPGRKHKKSKKYFKKSAKGRSKGKPKEEKKDSFGEKLATQIIKNLQIKITSIHMRYEDAITDASRPMSVGITLGELSLQTADENWTPCILSDTAKIIYKLVRLDCLCAYWNVNSRLFYQEAREQILVHLKGGIASSSHEPKNYHYIFRPISASAKLCINPSAEAELNSPKINLDMEVQSIDIEMTKPQYLSIIDLLESVNYMVRNVPYRKYKPNVPLHTNASKWWKYAVTGILEVHLRRKYRMWSWDHIKRHRQNLKSYKMAYKNKLTQTKPSEELLKQLQDLEKSLDIFNITLARQQAHVEVIRSGHKMLGKKGKEKQSGGWFSGLWGRKEPKKGEDEDKSVPESINDLLTTEEKTKLYTAIGYSESSHNLILPKEYVAHVISFKLVTTSITIREEPNVPEIVNVQIIDLSASVFQRPGAKGLKVEARLQHWYVTGLKQQDTVPSLLASLGGTDSSLLNVCFEINPEGSNADQLLSVQSQPVELIYDAQTINSLVEFFQTNRGLDLEQLTSATLLKLEKFKEKTATGLSYIIETRKTFDIQINLKPSYLVVPQTGFYNPSSSLLIVDFGSLQLNSIDHADQKAEPSPLSLEEILKRAYEKFDVELRSVQLLFSKPGQDWKSARKQNSSSQHILQPLDVKVQLSRAIVEKDSRIPKFKVSGELPLLHVKITDEKLRSVCQLADSIPLPPSLSSSSSPVRSKMLRVKPEGMFDPGLVAIGSSASLEDSSSLESEEEFCDAKEDADLPGKAAVAAGDAVPSEVQKEDNETPSEELTDLQLKFEVREVVVELARQDSQENPLLVFSVSQLGTEVNIRTFDLTSTSYLKKINFDYCEVPGDRNQKLHLISCADTAGSDLLKVEYIKVDKHSPYFKMNHDATEQVLKVTVSSLNFLLHAKALLSTINFLTTVIPSGDMASTDKDHETKIQNQGQDKGGAAKTVLKSSKELDFKMFAMMDAFNVALCDEKHNIADISVQGLDASILVQSKQTQFFARLRDIVVTDVDSKTLHKKAVSIVGNEVFSFNVTLYPNAIDDENYADMSKVDGKITLRVGCIQIIYLQKFLMSLLNFFDNFQAAKEALSAATAQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSISMNALVADLGLITVQNRFTLIPGKEFSVPPVLDVMDVNLTQLKLSRTMLQTSPSQVDIEILQPINLQLIVQRNLAADWYHDIPSMEIKGDLKTVNVVLSEEDLTVLMKVIEQNLGEGSKTSSTKALKDEGKRKSKDPIEAAKLGKVVASGSSAADQLMEIMKGGVPNDVINVQLNFEIKEVTVELTKKINAQQNPFLVFHVVQLGTETKMRNYDLSATAYLKKIGLNCCEFPDSNNKPLKLISSSDKPGADLLKVQYIKADRNGPHFKSTFDSTEQKMTIAFSSLDLILHSQALLSTVNFMAAVFPSKNVEKDHEAKISTEGHVKETLTKAVPTDATFDIFDLKFSAELGALNIIVCDDKSNIADVKIQGMDASVTMQSKRTEVFARLKDVILTDVGPRTLHKKVISIIGDEVFSFKMVLWRNATEGEAYLDMSNVDGEVALQLGCIQLVYLHKFFKSLMNFFDTFQAAEVALSAATVQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSVSVNAVVADLGLITVRNKFTMISAEECTLPPVVDIMEIQLTQLKLSRTILQKDSIQPDFQILQPVNLLLTIKRNLAVAWYHQIPGIEINGDLKTLSVTVSQDDLRLLLKILLENLGEVADDQSAARENLNKIPEKKIVSPTNLCEASPQGNVDDMHCVESKDKPEPFETLKFDFKFEALSIVLYTKDLKQATGLVERLESSRLGEFRLHLTTASGRMI…
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527398..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1559830..1559892,1566624..1566683,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1801942..1802033,1803825..1803945,1805410..1805499,1810143..1810232)
location: region:1527398-1810232:1
so has part: feature:1527398-1527497:1:exon
so has part: feature:1532571-1532614:1:exon
so has part: feature:1543102-1543144:1:exon
so has part: feature:1549074-1549169:1:exon
so has part: feature:1551815-1551916:1:exon
so has part: feature:1559830-1559892:1:exon
so has part: feature:1566624-1566683:1:exon
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so has part: feature:1576879-1576938:1:exon
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so has part: feature:1613975-1614089:1:exon
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so has part: feature:1618377-1618506:1:exon
so has part: feature:1619965-1620082:1:exon
so has part: feature:1621665-1621800:1:exon
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so has part: feature:1636200-1636259:1:exon
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so has part: feature:1650695-1650803:1:exon
so has part: feature:1652011-1652156:1:exon
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so has part: feature:1657458-1657537:1:exon
so has part: feature:1661234-1661293:1:exon
so has part: feature:1676238-1676394:1:exon
so has part: feature:1677796-1677909:1:exon
so has part: feature:1678767-1678870:1:exon
so has part: feature:1679889-1680056:1:exon
so has part: feature:1684174-1684478:1:exon
so has part: feature:1688858-1689005:1:exon
so has part: feature:1695634-1695781:1:exon
so has part: feature:1698565-1698698:1:exon
so has part: feature:1700065-1700234:1:exon
so has part: feature:1701726-1701958:1:exon
so has part: feature:1703085-1703317:1:exon
so has part: feature:1706718-1706810:1:exon
so has part: feature:1707118-1707483:1:exon
so has part: feature:1713257-1713346:1:exon
so has part: feature:1714428-1714583:1:exon
so has part: feature:1716161-1716425:1:exon
so has part: feature:1722068-1722228:1:exon
so has part: feature:1722809-1722930:1:exon
so has part: feature:1723981-1724278:1:exon
so has part: feature:1724916-1725299:1:exon
so has part: feature:1728249-1728353:1:exon
so has part: feature:1729845-1730009:1:exon
so has part: feature:1732391-1732519:1:exon
so has part: feature:1739667-1739800:1:exon
so has part: feature:1744739-1744865:1:exon

XP_051898325.1
type: Protein
SIO_000068: ncbiprotein

position:1527398:1
position: 1527398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1810232:1
position: 1810232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527398-1527497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532571-1532614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543102-1543144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1549074-1549169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551815-1551916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559830-1559892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1566624-1566683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1572827-1572936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1573129-1573188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1576879-1576938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1581095-1581175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583811-1583868:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1584689-1584816:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587465-1587571:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1592331-1592502:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1596836-1596898:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1597932-1598061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1606337-1606431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1609642-1609784:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1611963-1612155:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1613975-1614089:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1614224-1614360:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1618377-1618506:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1619965-1620082:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1621665-1621800:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1622851-1622929:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1625435-1625604:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1629849-1630002:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1635536-1635615:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1636200-1636259:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1639787-1639952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1640786-1640893:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1644218-1644321:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1646200-1646367:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1647533-1647837:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1650098-1650245:1:exon

urn:…
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SIO_000628: feature:1650695-1650803:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1652011-1652156:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1654384-1654540:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1657458-1657537:1:exon

urn:…
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SIO_000628: feature:1661234-1661293:1:exon

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SIO_000628: feature:1676238-1676394:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1677796-1677909:1:exon

urn:…
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SIO_000628: feature:1678767-1678870:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1679889-1680056:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1684174-1684478:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1688858-1689005:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1695634-1695781:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1698565-1698698:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1700065-1700234:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1701726-1701958:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1703085-1703317:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1706718-1706810:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1707118-1707483:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1713257-1713346:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1714428-1714583:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1716161-1716425:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1722068-1722228:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1722809-1722930:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1723981-1724278:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1724916-1725299:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1728249-1728353:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1729845-1730009:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1732391-1732519:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1739667-1739800:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1744739-1744865:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1747782-1748017:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1761491-1761635:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1762400-1762534:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1763551-1763632:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1763715-1763784:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1765219-1765330:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1768163-1768276:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1769054-1769193:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1770427-1770508:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1771915-1772028:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1772123-1772198:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1772364-1772527:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1777667-1777712:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1786869-1786992:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1788655-1788769:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1801942-1802033:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1803825-1803945:1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1805410-1805499:1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1810143-1810232:1:exon

vps13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: vps13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intermembrane lipid transfer protein VPS13C isoform X1
translation: MVFEALVADLLNRFLGDYVENLDKSQLKLGIWGGNVVLDNLQIKENALNDFDVPFKIKAGQIDKLTLKIPWKNLYSEAVVATLDGLHLLVVPEGSIQYDAEKEEKQLQENKQKELLRIEEALEKAARKGKPKEEKKDSFGEKLATQIIKNLQIKITSIHMRYEDAITDASRPMSVGITLGELSLQTADENWTPCILSDTAKIIYKLVRLDCLCAYWNVNSRLFYQEAREQILVHLKGGIASSSHEPKNYHYIFRPISASAKLCINPSAEAELNSPKINLDMEVQSIDIEMTKPQYLSIIDLLESVNYMVRNVPYRKYKPNVPLHTNASKWWKYAVTGILEVHLRRKYRMWSWDHIKRHRQNLKSYKMAYKNKLTQTKPSEELLKQLQDLEKSLDIFNITLARQQAHVEVIRSGHKMLGKKGKEKQSGGWFSGLWGRKEPKKGEDEDKSVPESINDLLTTEEKTKLYTAIGYSESSHNLILPKEYVAHVISFKLVTTSITIREEPNVPEIVNVQIIDLSASVFQRPGAKGLKVEARLQHWYVTGLKQQDTVPSLLASLGGTDSSLLNVCFEINPEGSNADQLLSVQSQPVELIYDAQTINSLVEFFQTNRGLDLEQLTSATLLKLEKFKEKTATGLSYIIETRKTFDIQINLKPSYLVVPQTGFYNPSSSLLIVDFGSLQLNSIDHADQKAEPSPLSLEEILKRAYEKFDVELRSVQLLFSKPGQDWKSARKQNSSSQHILQPLDVKVQLSRAIVEKDSRIPKFKVSGELPLLHVKITDEKLRSVCQLADSIPLPPSLSSSSSPVRSKMLRVKPEGMFDPGLVAIGSSASLEDSSSLESEEEFCDAKEDADLPGKAAVAAGDAVPSEVQKEDNETPSEELTDLQLKFEVREVVVELARQDSQENPLLVFSVSQLGTEVNIRTFDLTSTSYLKKINFDYCEVPGDRNQKLHLISCADTAGSDLLKVEYIKVDKHSPYFKMNHDATEQVLKVTVSSLNFLLHAKALLSTINFLTTVIPSGDMASTDKDHETKIQNQGQDKGGAAKTVLKSSKELDFKMFAMMDAFNVALCDEKHNIADISVQGLDASILVQSKQTQFFARLRDIVVTDVDSKTLHKKAVSIVGNEVFSFNVTLYPNAIDDENYADMSKVDGKITLRVGCIQIIYLQKFLMSLLNFFDNFQAAKEALSAATAQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSISMNALVADLGLITVQNRFTLIPGKEFSVPPVLDVMDVNLTQLKLSRTMLQTSPSQVDIEILQPINLQLIVQRNLAADWYHDIPSMEIKGDLKTVNVVLSEEDLTVLMKVIEQNLGEGSKTSSTKALKDEGKRKSKDPIEAAKLGKVVASGSSAADQLMEIMKGGVPNDVINVQLNFEIKEVTVELTKKINAQQNPFLVFHVVQLGTETKMRNYDLSATAYLKKIGLNCCEFPDSNNKPLKLISSSDKPGADLLKVQYIKADRNGPHFKSTFDSTEQKMTIAFSSLDLILHSQALLSTVNFMAAVFPSKNVEKDHEAKISTEGHVKETLTKAVPTDATFDIFDLKFSAELGALNIIVCDDKSNIADVKIQGMDASVTMQSKRTEVFARLKDVILTDVGPRTLHKKVISIIGDEVFSFKMVLWRNATEGEAYLDMSNVDGEVALQLGCIQLVYLHKFFKSLMNFFDTFQAAEVALSAATVQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSVSVNAVVADLGLITVRNKFTMISAEECTLPPVVDIMEIQLTQLKLSRTILQKDSIQPDFQILQPVNLLLTIKRNLAVAWYHQIPGIEINGDLKTLSVTVSQDDLRLLLKILLENLGEVADDQSAARENLNKIPEKKIVSPTNLCEASPQGNVDDMHCVESKDKPEPFETLKFDFKFEALSIVLYTKDLKQATGLVERLESSRLGEFRLHLTTASGRMISDGSLMFDMKLTTCTLDDLRQGIEKVTQRMIEKKQGSEENV…
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527398..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1801942..1802033,1803825..1803945,1805410..1805499,1810143..1810232)
location: region:1527398-1810232:1
so has part: feature:1527398-1527497:1:exon
so has part: feature:1532571-1532614:1:exon
so has part: feature:1543102-1543144:1:exon
so has part: feature:1549074-1549169:1:exon
so has part: feature:1551815-1551916:1:exon
so has part: feature:1572827-1572936:1:exon
so has part: feature:1573129-1573188:1:exon
so has part: feature:1576879-1576938:1:exon
so has part: feature:1581095-1581175:1:exon
so has part: feature:1583811-1583868:1:exon
so has part: feature:1584689-1584816:1:exon
so has part: feature:1587465-1587571:1:exon
so has part: feature:1592331-1592502:1:exon
so has part: feature:1596836-1596898:1:exon
so has part: feature:1597932-1598061:1:exon
so has part: feature:1606337-1606431:1:exon
so has part: feature:1609642-1609784:1:exon
so has part: feature:1611963-1612155:1:exon
so has part: feature:1613975-1614089:1:exon
so has part: feature:1614224-1614360:1:exon
so has part: feature:1618377-1618506:1:exon
so has part: feature:1619965-1620082:1:exon
so has part: feature:1621665-1621800:1:exon
so has part: feature:1622851-1622929:1:exon
so has part: feature:1625435-1625604:1:exon
so has part: feature:1629849-1630002:1:exon
so has part: feature:1635536-1635615:1:exon
so has part: feature:1636200-1636259:1:exon
so has part: feature:1639787-1639952:1:exon
so has part: feature:1640786-1640893:1:exon
so has part: feature:1644218-1644321:1:exon
so has part: feature:1646200-1646367:1:exon
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so has part: feature:1650695-1650803:1:exon
so has part: feature:1652011-1652156:1:exon
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so has part: feature:1657458-1657537:1:exon
so has part: feature:1661234-1661293:1:exon
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so has part: feature:1677796-1677909:1:exon
so has part: feature:1678767-1678870:1:exon
so has part: feature:1679889-1680056:1:exon
so has part: feature:1684174-1684478:1:exon
so has part: feature:1688858-1689005:1:exon
so has part: feature:1695634-1695781:1:exon
so has part: feature:1698565-1698698:1:exon
so has part: feature:1700065-1700234:1:exon
so has part: feature:1701726-1701958:1:exon
so has part: feature:1703085-1703317:1:exon
so has part: feature:1706718-1706810:1:exon
so has part: feature:1707118-1707483:1:exon
so has part: feature:1713257-1713346:1:exon
so has part: feature:1714428-1714583:1:exon
so has part: feature:1716161-1716425:1:exon
so has part: feature:1722068-1722228:1:exon
so has part: feature:1722809-1722930:1:exon
so has part: feature:1723981-1724278:1:exon
so has part: feature:1724916-1725299:1:exon
so has part: feature:1728249-1728353:1:exon
so has part: feature:1729845-1730009:1:exon
so has part: feature:1732391-1732519:1:exon
so has part: feature:1739667-1739800:1:exon
so has part: feature:1744739-1744865:1:exon
so has part: feature:1747782-1748017:1:exon
so has part: feature:1761491-1761635:1:exon

XP_051898323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1527398-1527497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532571-1532614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543102-1543144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1549074-1549169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551815-1551916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1572827-1572936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573129-1573188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1576879-1576938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1581095-1581175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1583811-1583868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1584689-1584816:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1587465-1587571:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1592331-1592502:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1596836-1596898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1597932-1598061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1606337-1606431:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1609642-1609784:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1611963-1612155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1613975-1614089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1614224-1614360:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1618377-1618506:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1619965-1620082:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1621665-1621800:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1622851-1622929:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1625435-1625604:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1629849-1630002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1635536-1635615:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1636200-1636259:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1639787-1639952:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1640786-1640893:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1644218-1644321:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1646200-1646367:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1647533-1647837:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1650098-1650245:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1650695-1650803:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1652011-1652156:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1654384-1654540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1657458-1657537:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1661234-1661293:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1676238-1676394:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1677796-1677909:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1678767-1678870:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1679889-1680056:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1684174-1684478:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1688858-1689005:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1695634-1695781:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1698565-1698698:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1700065-1700234:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1701726-1701958:1:exon

urn:…
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urn:…
SIO_000300: 51
SIO_000628: feature:1706718-1706810:1:exon

urn:…
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SIO_000628: feature:1728249-1728353:1:exon

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SIO_000628: feature:1729845-1730009:1:exon

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SIO_000628: feature:1732391-1732519:1:exon

urn:…
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SIO_000628: feature:1739667-1739800:1:exon

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SIO_000628: feature:1744739-1744865:1:exon

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urn:…
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SIO_000628: feature:1765219-1765330:1:exon

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SIO_000628: feature:1768163-1768276:1:exon

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SIO_000628: feature:1769054-1769193:1:exon

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SIO_000628: feature:1770427-1770508:1:exon

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SIO_000628: feature:1771915-1772028:1:exon

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SIO_000628: feature:1772123-1772198:1:exon

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SIO_000628: feature:1772364-1772527:1:exon

urn:…
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SIO_000628: feature:1777667-1777712:1:exon

urn:…
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SIO_000628: feature:1786869-1786992:1:exon

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SIO_000628: feature:1788655-1788769:1:exon

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SIO_000628: feature:1801942-1802033:1:exon

urn:…
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SIO_000628: feature:1803825-1803945:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1805410-1805499:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1810143-1810232:1:exon

vps13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: vps13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intermembrane lipid transfer protein VPS13C isoform X2
translation: MVFEALVADLLNRFLGDYVENLDKSQLKLGIWGGNVVLDNLQIKENALNDFDVPFKIKAGQIDKLTLKIPWKNLYSEAVVATLDGLHLLVVPEGSIQYDAEKEEKQLQENKQKELLRIEEALEKAARKGKPKEEKKDSFGEKLATQIIKNLQIKITSIHMRYEDAITDASRPMSVGITLGELSLQTADENWTPCILSDTAKIIYKLVRLDCLCAYWNVNSRLFYQEAREQILVHLKGGIASSSHEPKNYHYIFRPISASAKLCINPSAEAELNSPKINLDMEVQSIDIEMTKPQYLSIIDLLESVNYMVRNVPYRKYKPNVPLHTNASKWWKYAVTGILEVHLRRKYRMWSWDHIKRHRQNLKSYKMAYKNKLTQTKPSEELLKQLQDLEKSLDIFNITLARQQAHVEVIRSGHKMLGKKGKEKQSGGWFSGLWGRKEPKKGEDEDKSVPESINDLLTTEEKTKLYTAIGYSESSHNLILPKEYVAHVISFKLVTTSITIREEPNVPEIVNVQIIDLSASVFQRPGAKGLKVEARLQHWYVTGLKQQDTVPSLLASLGGTDSSLLNVCFEINPEGSNADQLLSVQSQPVELIYDAQTINSLVEFFQTNRGLDLEQLTSATLLKLEKFKEKTATGLSYIIETRKTFDIQINLKPSYLVVPQTGFYNPSSSLLIVDFGSLQLNSIDHADQKAEPSPLSLEEILKRAYEKFDVELRSVQLLFSKPGQDWKSARKQNSSSQHILQPLDVKVQLSRAIVEKDSRIPKFKVSGELPLLHVKITDEKLRSVCQLADSIPLPPSLSSSSSPVRSKMLRVKPEGMFDPGLVAIGSSASLEDSSSLESEEEFCDAKEDADLPGKAAVAAGDAVPSEVQKEDNETPSEELTDLQLKFEVREVVVELARQDSQENPLLVFSVSQLGTEVNIRTFDLTSTSYLKKINFDYCEVPGDRNQKLHLISCADTAGSDLLKVEYIKVDKHSPYFKMNHDATEQVLKVTVSSLNFLLHAKALLSTINFLTTVIPSGDMASTDKDHETKIQNQGQDKGGAAKTVLKSSKELDFKMFAMMDAFNVALCDEKHNIADISVQGLDASILVQSKQTQFFARLRDIVVTDVDSKTLHKKAVSIVGNEVFSFNVTLYPNAIDDENYADMSKVDGKITLRVGCIQIIYLQKFLMSLLNFFDNFQAAKEALSAATAQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSISMNALVADLGLITVQNRFTLIPGKEFSVPPVLDVMDVNLTQLKLSRTMLQTSPSQVDIEILQPINLQLIVQRNLAADWYHDIPSMEIKGDLKTVNVVLSEEDLTVLMKVIEQNLGEGSKTSSTKALKDEGKRKSKDPIEAAKLGKVVASGSSAADQLMEIMKGGVPNDVINVQLNFEIKEVTVELTKKINAQQNPFLVFHVVQLGTETKMRNYDLSATAYLKKIGLNCCEFPDSNNKPLKLISSSDKPGADLLKVQYIKADRNGPHFKSTFDSTEQKMTIAFSSLDLILHSQALLSTVNFMAAVFPSKNVEKDHEAKISTEGHVKETLTKAVPTDATFDIFDLKFSAELGALNIIVCDDKSNIADVKIQGMDASVTMQSKRTEVFARLKDVILTDVGPRTLHKKVISIIGDEVFSFKMVLWRNATEGEAYLDMSNVDGEVALQLGCIQLVYLHKFFKSLMNFFDTFQAAEVALSAATVQAAEKAASSVKDFAQKSFRLAMDINLKAPVIIIPESSVSVNAVVADLGLITVRNKFTMISAEECTLPPVVDIMEIQLTQLKLSRTILQKDSIQPDFQILQPVNLLLTIKRNLAVAWYHQIPGIEINGDLKTLSVTVSQDDLRLLLKILLENLGEVADDQSAARENLNKIPEKKIVSPTNLCEASPQGNVDDMHCVESKDKPEPFETLKFDFKFEALSIVLYTKDLKQATGLVERLESSRLGEFRLHLTTASGRMISDGSLMFDMKLTTCTLDDLRQGIEKVTQRMIEKKQGSEENV…
SIO_010081: vps13c
subclass of: SO_0000673
so part of: vps13c
location: join(1527398..1527497,1532571..1532614,1543102..1543144,1549074..1549169,1551815..1551916,1572827..1572936,1573129..1573188,1576879..1576938,1581095..1581175,1583811..1583868,1584689..1584816,1587465..1587571,1592331..1592502,1596836..1596898,1597932..1598061,1606337..1606431,1609642..1609784,1611963..1612155,1613975..1614089,1614224..1614360,1618377..1618506,1619965..1620082,1621665..1621800,1622851..1622929,1625435..1625604,1629849..1630002,1635536..1635615,1636200..1636259,1639787..1639952,1640786..1640893,1644218..1644321,1646200..1646367,1647533..1647837,1650098..1650245,1650695..1650803,1652011..1652156,1654384..1654540,1657458..1657537,1661234..1661293,1676238..1676394,1677796..1677909,1678767..1678870,1679889..1680056,1684174..1684478,1688858..1689005,1695634..1695781,1698565..1698698,1700065..1700234,1701726..1701958,1703085..1703317,1706718..1706810,1707118..1707483,1713257..1713346,1714428..1714583,1716161..1716425,1722068..1722228,1722809..1722930,1723981..1724278,1724916..1725299,1728249..1728353,1729845..1730009,1732391..1732519,1739667..1739800,1744739..1744865,1747782..1748017,1761491..1761635,1762400..1762534,1763551..1763632,1763715..1763784,1765219..1765330,1768163..1768276,1769054..1769193,1770427..1770508,1771915..1772028,1772123..1772198,1772364..1772527,1777667..1777712,1786869..1786992,1788655..1788769,1794610..1794624)
location: region:1527398-1794624:1
so has part: feature:1527398-1527497:1:exon
so has part: feature:1532571-1532614:1:exon
so has part: feature:1543102-1543144:1:exon
so has part: feature:1549074-1549169:1:exon
so has part: feature:1551815-1551916:1:exon
so has part: feature:1572827-1572936:1:exon
so has part: feature:1573129-1573188:1:exon
so has part: feature:1576879-1576938:1:exon
so has part: feature:1581095-1581175:1:exon
so has part: feature:1583811-1583868:1:exon
so has part: feature:1584689-1584816:1:exon
so has part: feature:1587465-1587571:1:exon
so has part: feature:1592331-1592502:1:exon
so has part: feature:1596836-1596898:1:exon
so has part: feature:1597932-1598061:1:exon
so has part: feature:1606337-1606431:1:exon
so has part: feature:1609642-1609784:1:exon
so has part: feature:1611963-1612155:1:exon
so has part: feature:1613975-1614089:1:exon
so has part: feature:1614224-1614360:1:exon
so has part: feature:1618377-1618506:1:exon
so has part: feature:1619965-1620082:1:exon
so has part: feature:1621665-1621800:1:exon
so has part: feature:1622851-1622929:1:exon
so has part: feature:1625435-1625604:1:exon
so has part: feature:1629849-1630002:1:exon
so has part: feature:1635536-1635615:1:exon
so has part: feature:1636200-1636259:1:exon
so has part: feature:1639787-1639952:1:exon
so has part: feature:1640786-1640893:1:exon
so has part: feature:1644218-1644321:1:exon
so has part: feature:1646200-1646367:1:exon
so has part: feature:1647533-1647837:1:exon
so has part: feature:1650098-1650245:1:exon
so has part: feature:1650695-1650803:1:exon
so has part: feature:1652011-1652156:1:exon
so has part: feature:1654384-1654540:1:exon
so has part: feature:1657458-1657537:1:exon
so has part: feature:1661234-1661293:1:exon
so has part: feature:1676238-1676394:1:exon
so has part: feature:1677796-1677909:1:exon
so has part: feature:1678767-1678870:1:exon
so has part: feature:1679889-1680056:1:exon
so has part: feature:1684174-1684478:1:exon
so has part: feature:1688858-1689005:1:exon
so has part: feature:1695634-1695781:1:exon
so has part: feature:1698565-1698698:1:exon
so has part: feature:1700065-1700234:1:exon
so has part: feature:1701726-1701958:1:exon
so has part: feature:1703085-1703317:1:exon
so has part: feature:1706718-1706810:1:exon
so has part: feature:1707118-1707483:1:exon
so has part: feature:1713257-1713346:1:exon
so has part: feature:1714428-1714583:1:exon
so has part: feature:1716161-1716425:1:exon
so has part: feature:1722068-1722228:1:exon
so has part: feature:1722809-1722930:1:exon
so has part: feature:1723981-1724278:1:exon
so has part: feature:1724916-1725299:1:exon
so has part: feature:1728249-1728353:1:exon
so has part: feature:1729845-1730009:1:exon
so has part: feature:1732391-1732519:1:exon
so has part: feature:1739667-1739800:1:exon
so has part: feature:1744739-1744865:1:exon
so has part: feature:1747782-1748017:1:exon
so has part: feature:1761491-1761635:1:exon

XP_051898324.1
type: Protein
SIO_000068: ncbiprotein

position:1794624:1
position: 1794624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527398-1527497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532571-1532614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543102-1543144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1549074-1549169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551815-1551916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1572827-1572936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1573129-1573188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1576879-1576938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1581095-1581175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1583811-1583868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1584689-1584816:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1587465-1587571:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1592331-1592502:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1596836-1596898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1597932-1598061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1606337-1606431:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1609642-1609784:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1611963-1612155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1613975-1614089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1614224-1614360:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1618377-1618506:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1619965-1620082:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1621665-1621800:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1622851-1622929:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1625435-1625604:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1629849-1630002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1635536-1635615:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1636200-1636259:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1639787-1639952:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1640786-1640893:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1644218-1644321:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1646200-1646367:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1647533-1647837:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1650098-1650245:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1650695-1650803:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1652011-1652156:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1654384-1654540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1657458-1657537:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1661234-1661293:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1676238-1676394:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1677796-1677909:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1678767-1678870:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1679889-1680056:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1684174-1684478:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1688858-1689005:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1695634-1695781:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1698565-1698698:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1700065-1700234:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1701726-1701958:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1703085-1703317:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1706718-1706810:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1707118-1707483:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1713257-1713346:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1714428-1714583:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1716161-1716425:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1722068-1722228:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1722809-1722930:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1723981-1724278:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1724916-1725299:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1728249-1728353:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1729845-1730009:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1732391-1732519:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1739667-1739800:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1744739-1744865:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1747782-1748017:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1761491-1761635:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1762400-1762534:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1763551-1763632:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1763715-1763784:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1765219-1765330:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1768163-1768276:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1769054-1769193:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1770427-1770508:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1771915-1772028:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1772123-1772198:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1772364-1772527:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1777667-1777712:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1786869-1786992:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1788655-1788769:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1794610-1794624:1:exon

LOC127585158
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585158
note: maestro heat-like repeat-containing protein family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1986548..1991455
location: region:1986548-1991455:1
so has part: feature:1986548-1991455:1:exon
subclass of: SO_0000010

127585158
type: Gene
SIO_000068: ncbigene

position:1986548:1
position: 1986548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991455:1
position: 1991455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1986548-1991455:1:exon

LOC127585158
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585158
product: maestro heat-like repeat-containing protein family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052042373.1
SIO_010081: LOC127585158
subclass of: SO_0000673
so part of: LOC127585158
location: 1986548..1991455
location: region:1986548-1991455:1
so has part: feature:1986548-1991455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1986548-1991455:1:exon

LOC127585158
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maestro heat-like repeat-containing protein family member 1
translation: MKVEAWMSAVLGLSPDSSELVRLRMIESFQELGQTKRKRVLLFLHKFLTEHQSLPLLQRTTLLKSIILIVKENTGHLSRPLSKKIILMASVEISKITSVNDAHRETASKLLLTLGSSFTTEVFTELQSMIQRQTPANFYVILTLANLCSENVHSVVPLLKPVLENILCLLHVETCKRMRWVICYALGHLSKSILTYTSDHHLPIRKNPYVSELSSAYDVLFHSWLNSRDPKMTTGVVEAIGQIIYLLPSNKIENELPTLIPVILSLYQKSYSDLSITKGLCGILYTALERNSKMLLSHLENLLITLHRQLCIVMGQPTNSLSECLQNKILCCFQILTSAFVQEITKFLLLQLEVSSEQLQLGALVVLNYLINTVPSSMDGHKSQIMNSMTLSVLRNSNRVKGLLSQLMYTMASHSYLELEGGVELIRFIIEQCALPTGEDRECHKTRKSTEEHGSIVTDREVRSLYERLLEKLTTTLMIDNVLWPLLLEFVIPVRYTNALAAVCSSLAHLGSKKQQAGETEFVLNYEEHANLPNRQALLIRLLAVASSPYEGRGQGAPALSLLWVLGINIHPAAVKVWDKELPNLLQYLQEFSEDDLLQHQWEQKLLQVLSQTLEEIEDEVWIVQLSEVVTKQIHRCHCSPQQKGFLYRCLGIVLQLTQSHEVVKKKLQVMLQIVEHDKDLEREGVATGIGCCAQTHLDITLTVLKNCSKLNIFKKTASFYQIMKDQGSIEIMKVKSTLILCYGYLILHCPKEIILPRIETDILPNILNHFNIKILGMKVQVKDSTMKLSLIKTITLMARVFQHTEGQPAYKLTRKIELLTYMQEFIKAEPTDSVTTYIRKAAMDACACLLMVEPLFVLSDHDELVKLCLHSTFSLPPLEGSESRDKIKRQEIYKETLMSLEDLLRQLLHLDLSPNGLQCLFNFLMIWIESRKNYERENSLMMTLHLLTFYLDTGVINDKVPSHNFVTMIGYIVVRCSDPSLIAREVAVECLYVLLYLQLRLEGFPMDHKDSDVEHLKAIKDGLKDTNFETLYHIYIDLGTVLSNCVPHDQMNTLLLTISEGLTDEQLNGSYVASIVMNVLIEKCGTILTDIPGIIKVLYHQLQLITQPQITRFVTRSISILASQNVLMVLPHLLKYQIPLQTHMDDIWRSLLSDSTLATTSIQYLLNYLKLMYDDNSESQFQEVVLTTHQPLAVVHALHAMICCPGSENAINTLFPQLFTVILLYLSSSVQFCPRDFLRIPKQNKSFTPSDKPGNTDICHYVVEILQAILRCGKCDIANITEENGWDLIKSPGRNHEGIMLLANTMAVCAVPHLISIVEQLIPFLANMQERQRIAVVAFFAELLNHRVVLELSLADTLVGSLLRCLIDTSPTIQGLAVRGLGNTAIGAAQNIEKYTSKLLSVLIAVIHKYWKSNNLMAIEAMLSISKVLDSLQEHFEDSSLIDVALTIEPLFENEHEKLRTSAFKVLGKLIRFGNRERNPVLAEHLHPILISLLLHLNDESSEVITVCKSVLNLMAPSMGSENLSKMFQELSPEDPTLVYEAYLSEVSRHISEDLPDRIICYIMSCAAFFTNPLPEIRENAVTLIGFLMYHGAAEFAVQFSADSVCKEICFLFSDPVKSVRIKAAVATRHLHMY
SIO_010081: LOC127585158
subclass of: SO_0000673
so part of: LOC127585158
location: 1986548..1991455
location: region:1986548-1991455:1
so has part: feature:1986548-1991455:1:exon

XP_051898333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1986548-1991455:1:exon

LOC127585159
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585159
note: uncharacterized LOC127585159; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1993614..2073137
location: region:1993614-2073137:1
so has part: feature:1993614-2073137:1:exon
subclass of: SO_0000010

127585159
type: Gene
SIO_000068: ncbigene

position:1993614:1
position: 1993614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073137:1
position: 2073137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993614-2073137:1:exon

LOC127585159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585159
product: uncharacterized LOC127585159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052042374.1
SIO_010081: LOC127585159
subclass of: SO_0000673
so part of: LOC127585159
location: join(1993614..1993702,2036719..2036820,2037701..2038028,2072612..2073137)
location: region:1993614-2073137:1
so has part: feature:1993614-1993702:1:exon
so has part: feature:2036719-2036820:1:exon
so has part: feature:2037701-2038028:1:exon
so has part: feature:2072612-2073137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993614-1993702:1:exon

position:1993702:1
position: 1993702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2036719-2036820:1:exon

position:2036719:1
position: 2036719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036820:1
position: 2036820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2037701-2038028:1:exon

position:2037701:1
position: 2037701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038028:1
position: 2038028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2072612-2073137:1:exon

position:2072612:1
position: 2072612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127585159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC127585159
translation: MVGMEKMGQNGLFLCCTIPELPSLPTNTVRRMYLDERSVLGRKMELIEVAGTEQWAEWPYFRSVVKDYSCGSFRGRSRRCPRPGSRDDERSVPSACALLPPLPGALRSAARRRRSLSPPQPQPVPGIPPRASPRPPATAAWSPRLPHPRQQTASREAAIRWRPPAATTAPATENKLHRRDMRAPYPQTRMKTLHKHHHCSRVRPSDKLEGQQQANQALERWKLQRLGGRCHSCSGP
SIO_010081: LOC127585159
subclass of: SO_0000673
so part of: LOC127585159
location: join(1993614..1993702,2036719..2036820,2037701..2038028,2072612..2072803)
location: region:1993614-2072803:1
so has part: feature:1993614-1993702:1:exon
so has part: feature:2036719-2036820:1:exon
so has part: feature:2037701-2038028:1:exon
so has part: feature:2072612-2072803:1:exon

XP_051898334.1
type: Protein
SIO_000068: ncbiprotein

position:2072803:1
position: 2072803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993614-1993702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2036719-2036820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2037701-2038028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2072612-2072803:1:exon

LOC127585200
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585200
note: uncharacterized LOC127585200; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2334399..2336175)
location: region:2334399-2336175:-1
so has part: feature:2334399-2336175:-1:exon
subclass of: SO_0000011

127585200
type: Gene
SIO_000068: ncbigene

position:2334399:-1
position: 2334399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336175:-1
position: 2336175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334399-2336175:-1:exon

LOC127585200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: lncRNA
gene: LOC127585200
product: uncharacterized LOC127585200
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007958477.1
SIO_010081: LOC127585200
subclass of: SO_0000673
so part of: LOC127585200
location: complement(join(2334399..2334871,2336024..2336175))
location: region:2334399-2336175:-1
so has part: feature:2336024-2336175:-1:exon
so has part: feature:2334399-2334871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2336024-2336175:-1:exon

position:2336024:-1
position: 2336024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2334399-2334871:-1:exon

position:2334871:-1
position: 2334871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127585189
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585189
note: nuclear receptor ROR-alpha A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2368891..2460889
location: region:2368891-2460889:1
so has part: feature:2368891-2460889:1:exon
subclass of: SO_0000010

127585189
type: Gene
SIO_000068: ncbigene

position:2368891:1
position: 2368891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460889:1
position: 2460889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368891-2460889:1:exon

LOC127585189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585189
product: nuclear receptor ROR-alpha A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins
transcript id: XM_052042421.1
SIO_010081: LOC127585189
subclass of: SO_0000673
so part of: LOC127585189
location: join(2368891..2369038,2431006..2431091,2438461..2438602,2441103..2441489,2444519..2444640,2444722..2444854,2448661..2448768,2450300..2450410,2453221..2453333,2455169..2460889)
location: region:2368891-2460889:1
so has part: feature:2368891-2369038:1:exon
so has part: feature:2431006-2431091:1:exon
so has part: feature:2438461-2438602:1:exon
so has part: feature:2441103-2441489:1:exon
so has part: feature:2444519-2444640:1:exon
so has part: feature:2444722-2444854:1:exon
so has part: feature:2448661-2448768:1:exon
so has part: feature:2450300-2450410:1:exon
so has part: feature:2453221-2453333:1:exon
so has part: feature:2455169-2460889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2368891-2369038:1:exon

position:2369038:1
position: 2369038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2431006-2431091:1:exon

position:2431006:1
position: 2431006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431091:1
position: 2431091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2438461-2438602:1:exon

position:2438461:1
position: 2438461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438602:1
position: 2438602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2441103-2441489:1:exon

position:2441103:1
position: 2441103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441489:1
position: 2441489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2444519-2444640:1:exon

position:2444519:1
position: 2444519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444640:1
position: 2444640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2444722-2444854:1:exon

position:2444722:1
position: 2444722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444854:1
position: 2444854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2448661-2448768:1:exon

position:2448661:1
position: 2448661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448768:1
position: 2448768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2450300-2450410:1:exon

position:2450300:1
position: 2450300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450410:1
position: 2450410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2453221-2453333:1:exon

position:2453221:1
position: 2453221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453333:1
position: 2453333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2455169-2460889:1:exon

position:2455169:1
position: 2455169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127585189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585189
product: nuclear receptor ROR-alpha A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins
transcript id: XM_052042420.1
SIO_010081: LOC127585189
subclass of: SO_0000673
so part of: LOC127585189
location: join(2368897..2369038,2377037..2377154,2431006..2431091,2438461..2438602,2441103..2441489,2444519..2444640,2444722..2444854,2448661..2448768,2450300..2450410,2453221..2453333,2455169..2460889)
location: region:2368897-2460889:1
so has part: feature:2368897-2369038:1:exon
so has part: feature:2377037-2377154:1:exon
so has part: feature:2431006-2431091:1:exon
so has part: feature:2438461-2438602:1:exon
so has part: feature:2441103-2441489:1:exon
so has part: feature:2444519-2444640:1:exon
so has part: feature:2444722-2444854:1:exon
so has part: feature:2448661-2448768:1:exon
so has part: feature:2450300-2450410:1:exon
so has part: feature:2453221-2453333:1:exon
so has part: feature:2455169-2460889:1:exon

position:2368897:1
position: 2368897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368897-2369038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377037-2377154:1:exon

position:2377037:1
position: 2377037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377154:1
position: 2377154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2431006-2431091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2438461-2438602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2441103-2441489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2444519-2444640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2444722-2444854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2448661-2448768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2450300-2450410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2453221-2453333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2455169-2460889:1:exon

LOC127585189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-alpha A-like isoform X2
translation: MMHFLCSAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHAQPPGEAEPLTPPYSSLAELNNDLSNLYMDGQAAEVGKADSAMNNLYLDIQPSPDQSGLDINGIKQEPICEYVTAPDFFPYCSFTDGETSPTASMAELEHLAQNIAKSHIETCQYLQEELQQLMWQTYVREELEIYLNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDSQNNTVYFDGKFAGPDIFKSLGCDDLINSVFETGKSLCALHLVEDEIALFSAYVLISADRLWLQEKIKVEKLQQRIQLALQHLLQKHHREDGILTKLLSKVTTLRALCNRHTEKLSTFKAIHPDIVRVHFPPLYKELFSSEFEQMMPTDG
SIO_010081: LOC127585189
subclass of: SO_0000673
so part of: LOC127585189
location: join(2369008..2369038,2431006..2431091,2438461..2438602,2441103..2441489,2444519..2444640,2444722..2444854,2448661..2448768,2450300..2450410,2453221..2453333,2455169..2455333)
location: region:2369008-2455333:1
so has part: feature:2369008-2369038:1:exon
so has part: feature:2431006-2431091:1:exon
so has part: feature:2438461-2438602:1:exon
so has part: feature:2441103-2441489:1:exon
so has part: feature:2444519-2444640:1:exon
so has part: feature:2444722-2444854:1:exon
so has part: feature:2448661-2448768:1:exon
so has part: feature:2450300-2450410:1:exon
so has part: feature:2453221-2453333:1:exon
so has part: feature:2455169-2455333:1:exon

XP_051898381.1
type: Protein
SIO_000068: ncbiprotein

position:2369008:1
position: 2369008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455333:1
position: 2455333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2369008-2369038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431006-2431091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2438461-2438602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2441103-2441489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2444519-2444640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2444722-2444854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2448661-2448768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2450300-2450410:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2453221-2453333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2455169-2455333:1:exon

LOC127585189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-alpha A-like isoform X1
translation: MEKDKDDPQIKVPIWGKANFNIAGQDLTKVVWEQLRAAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHAQPPGEAEPLTPPYSSLAELNNDLSNLYMDGQAAEVGKADSAMNNLYLDIQPSPDQSGLDINGIKQEPICEYVTAPDFFPYCSFTDGETSPTASMAELEHLAQNIAKSHIETCQYLQEELQQLMWQTYVREELEIYLNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDSQNNTVYFDGKFAGPDIFKSLGCDDLINSVFETGKSLCALHLVEDEIALFSAYVLISADRLWLQEKIKVEKLQQRIQLALQHLLQKHHREDGILTKLLSKVTTLRALCNRHTEKLSTFKAIHPDIVRVHFPPLYKELFSSEFEQMMPTDG
SIO_010081: LOC127585189
subclass of: SO_0000673
so part of: LOC127585189
location: join(2377043..2377154,2431006..2431091,2438461..2438602,2441103..2441489,2444519..2444640,2444722..2444854,2448661..2448768,2450300..2450410,2453221..2453333,2455169..2455333)
location: region:2377043-2455333:1
so has part: feature:2377043-2377154:1:exon
so has part: feature:2431006-2431091:1:exon
so has part: feature:2438461-2438602:1:exon
so has part: feature:2441103-2441489:1:exon
so has part: feature:2444519-2444640:1:exon
so has part: feature:2444722-2444854:1:exon
so has part: feature:2448661-2448768:1:exon
so has part: feature:2450300-2450410:1:exon
so has part: feature:2453221-2453333:1:exon
so has part: feature:2455169-2455333:1:exon

XP_051898380.1
type: Protein
SIO_000068: ncbiprotein

position:2377043:1
position: 2377043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2377043-2377154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431006-2431091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2438461-2438602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2441103-2441489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2444519-2444640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2444722-2444854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2448661-2448768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2450300-2450410:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2453221-2453333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2455169-2455333:1:exon

ice2
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: ice2
note: interactor of little elongator complex ELL subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2472107..2568541
location: region:2472107-2568541:1
so has part: feature:2472107-2568541:1:exon
subclass of: SO_0000010

127585187
type: Gene
SIO_000068: ncbigene

position:2472107:1
position: 2472107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568541:1
position: 2568541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472107-2568541:1:exon

ice2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ice2
product: interactor of little elongator complex ELL subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052042413.1
SIO_010081: ice2
subclass of: SO_0000673
so part of: ice2
location: join(2472107..2472206,2474578..2474860,2477217..2477336,2485387..2485521,2486867..2486986,2490014..2490173,2497962..2498146,2502333..2503290,2504381..2504556,2516434..2516563,2538507..2538591,2543030..2543080,2557133..2557394,2567783..2568541)
location: region:2472107-2568541:1
so has part: feature:2472107-2472206:1:exon
so has part: feature:2474578-2474860:1:exon
so has part: feature:2477217-2477336:1:exon
so has part: feature:2485387-2485521:1:exon
so has part: feature:2486867-2486986:1:exon
so has part: feature:2490014-2490173:1:exon
so has part: feature:2497962-2498146:1:exon
so has part: feature:2502333-2503290:1:exon
so has part: feature:2504381-2504556:1:exon
so has part: feature:2516434-2516563:1:exon
so has part: feature:2538507-2538591:1:exon
so has part: feature:2543030-2543080:1:exon
so has part: feature:2557133-2557394:1:exon
so has part: feature:2567783-2568541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2472107-2472206:1:exon

position:2472206:1
position: 2472206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2474578-2474860:1:exon

position:2474578:1
position: 2474578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474860:1
position: 2474860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2477217-2477336:1:exon

position:2477217:1
position: 2477217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477336:1
position: 2477336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2485387-2485521:1:exon

position:2485387:1
position: 2485387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485521:1
position: 2485521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2486867-2486986:1:exon

position:2486867:1
position: 2486867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486986:1
position: 2486986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2490014-2490173:1:exon

position:2490014:1
position: 2490014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490173:1
position: 2490173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2497962-2498146:1:exon

position:2497962:1
position: 2497962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2498146:1
position: 2498146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2502333-2503290:1:exon

position:2502333:1
position: 2502333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503290:1
position: 2503290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2504381-2504556:1:exon

position:2504381:1
position: 2504381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504556:1
position: 2504556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2516434-2516563:1:exon

position:2516434:1
position: 2516434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516563:1
position: 2516563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2538507-2538591:1:exon

position:2538507:1
position: 2538507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538591:1
position: 2538591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2543030-2543080:1:exon

position:2543030:1
position: 2543030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543080:1
position: 2543080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2557133-2557394:1:exon

position:2557133:1
position: 2557133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557394:1
position: 2557394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2567783-2568541:1:exon

position:2567783:1
position: 2567783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ice2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ice2
product: interactor of little elongator complex ELL subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
transcript id: XM_052042414.1
SIO_010081: ice2
subclass of: SO_0000673
so part of: ice2
location: join(2472107..2472206,2474578..2474860,2477217..2477336,2485387..2485521,2486867..2486986,2490014..2490173,2497962..2498146,2502333..2503290,2504381..2504556,2516434..2516563,2538507..2538591,2543030..2543080,2567783..2567982)
location: region:2472107-2567982:1
so has part: feature:2472107-2472206:1:exon
so has part: feature:2474578-2474860:1:exon
so has part: feature:2477217-2477336:1:exon
so has part: feature:2485387-2485521:1:exon
so has part: feature:2486867-2486986:1:exon
so has part: feature:2490014-2490173:1:exon
so has part: feature:2497962-2498146:1:exon
so has part: feature:2502333-2503290:1:exon
so has part: feature:2504381-2504556:1:exon
so has part: feature:2516434-2516563:1:exon
so has part: feature:2538507-2538591:1:exon
so has part: feature:2543030-2543080:1:exon
so has part: feature:2567783-2567982:1:exon

position:2567982:1
position: 2567982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472107-2472206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2474578-2474860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2477217-2477336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485387-2485521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486867-2486986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2490014-2490173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2497962-2498146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502333-2503290:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2504381-2504556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2516434-2516563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2538507-2538591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543030-2543080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2567783-2567982:1:exon

ice2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ice2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X1
translation: MYNCYSMAPTFLELCEMVSRQTVEISETPSPLEVQQPPKTSLKLESTASASANKTSKGSAAIFPLPEPRVPYPRFSALTERDQRNYVQFMQKFKNMQWATRLQGKVYGHLAQYSELKNTVWSEMPDFMKHLQNVARMCAEDYDVISHDAARYTEEVLQVWNESLKKYPELYTVNEITSIMGGKFIPDLTLQLEKKLLCLGRALYLRVPTIASSNQLTTDYKTITSFTPPSAVRASAFESDISCDVNAEKLSVKYGAKVSLTSRALFTLLNNCGPNYTEPWEIPVHVKTICGEGNKMEKVVFIDSPLPKKELTVREKNLLFYEVPLDLLMSKKNYTAVSNLTLDKPQSSSTSEENVFHSREHQRSVNACGSSDLDFNADFTQLETFGTISSGLTKKPLLKDDAPRACKHALRTKASKSAPVTGDTKDQDLTKTKSPSVLVTKKKIQENQLLSSHSCPNSGRESNALETTDCRRLSISDQQKGDPKKEIRVEGDSETLANDGTDEMAGFKGLESDSDSEEDQLVIDTNFPASNDGCHPVEAAASNVAPILEKLDRQGPEEIIPDTPRSPSPDQNAPTSKKLKSTGLVRKRMASKTLLKEFDPVGQILRMQCKLLKSNPKKPVDQPQATQESSSLCHNPHGQPPLDWNPITIPDSQTSAFGNVPSFLEKTAQNTRTHLLSEELLNCDESASDYTAPSSGNVTYKLFSLSDLLLLVRGSIHKTQIRPRSNKGAGKKHVPVYVLPKLEYQSMYGIEAFTESEICQLWTESLINSNSWFYIGHIDVFTSKLILIDQFPAASIMQKLGSFNPVNSLNLLHHVLRKVTSLPEDRYLLSHSSGDSSITIYRTSHGGKFTRAAYNLHAAHSTLPTIPSTLSVPWVPLDPNVLLPYHIHHGRAPCTFPPRPVDNLQNQKMGVAKSKRDILAQGEAVTTEMKSHPPPGQHSEKQDLTTNKKKNKRKRQGRGKRWREKLKARKAQGKQGQ
SIO_010081: ice2
subclass of: SO_0000673
so part of: ice2
location: join(2472148..2472206,2474578..2474860,2477217..2477336,2485387..2485521,2486867..2486986,2490014..2490173,2497962..2498146,2502333..2503290,2504381..2504556,2516434..2516563,2538507..2538591,2543030..2543080,2557133..2557394,2567783..2567992)
location: region:2472148-2567992:1
so has part: feature:2472148-2472206:1:exon
so has part: feature:2474578-2474860:1:exon
so has part: feature:2477217-2477336:1:exon
so has part: feature:2485387-2485521:1:exon
so has part: feature:2486867-2486986:1:exon
so has part: feature:2490014-2490173:1:exon
so has part: feature:2497962-2498146:1:exon
so has part: feature:2502333-2503290:1:exon
so has part: feature:2504381-2504556:1:exon
so has part: feature:2516434-2516563:1:exon
so has part: feature:2538507-2538591:1:exon
so has part: feature:2543030-2543080:1:exon
so has part: feature:2557133-2557394:1:exon
so has part: feature:2567783-2567992:1:exon

XP_051898373.1
type: Protein
SIO_000068: ncbiprotein

position:2472148:1
position: 2472148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567992:1
position: 2567992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472148-2472206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2474578-2474860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2477217-2477336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485387-2485521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486867-2486986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2490014-2490173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2497962-2498146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502333-2503290:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2504381-2504556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2516434-2516563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2538507-2538591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543030-2543080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2557133-2557394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567783-2567992:1:exon

ice2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ice2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X2
translation: MYNCYSMAPTFLELCEMVSRQTVEISETPSPLEVQQPPKTSLKLESTASASANKTSKGSAAIFPLPEPRVPYPRFSALTERDQRNYVQFMQKFKNMQWATRLQGKVYGHLAQYSELKNTVWSEMPDFMKHLQNVARMCAEDYDVISHDAARYTEEVLQVWNESLKKYPELYTVNEITSIMGGKFIPDLTLQLEKKLLCLGRALYLRVPTIASSNQLTTDYKTITSFTPPSAVRASAFESDISCDVNAEKLSVKYGAKVSLTSRALFTLLNNCGPNYTEPWEIPVHVKTICGEGNKMEKVVFIDSPLPKKELTVREKNLLFYEVPLDLLMSKKNYTAVSNLTLDKPQSSSTSEENVFHSREHQRSVNACGSSDLDFNADFTQLETFGTISSGLTKKPLLKDDAPRACKHALRTKASKSAPVTGDTKDQDLTKTKSPSVLVTKKKIQENQLLSSHSCPNSGRESNALETTDCRRLSISDQQKGDPKKEIRVEGDSETLANDGTDEMAGFKGLESDSDSEEDQLVIDTNFPASNDGCHPVEAAASNVAPILEKLDRQGPEEIIPDTPRSPSPDQNAPTSKKLKSTGLVRKRMASKTLLKEFDPVGQILRMQCKLLKSNPKKPVDQPQATQESSSLCHNPHGQPPLDWNPITIPDSQTSAFGNVPSFLEKTAQNTRTHLLSEELLNCDESASDYTAPSSGNVTYKLFSLSDLLLLVRGSIHKTQIRPRSNKGAGKKHVPVYVLPKLEYQSMYGIEAFTESEICQLWTESLINSNSWFYIGHIDVFTSKLILIDQFPAASIMQKLGSFNPVNSLNLLHHVLRKVTRWVWQNQRETFLPKERQLPRK
SIO_010081: ice2
subclass of: SO_0000673
so part of: ice2
location: join(2472148..2472206,2474578..2474860,2477217..2477336,2485387..2485521,2486867..2486986,2490014..2490173,2497962..2498146,2502333..2503290,2504381..2504556,2516434..2516563,2538507..2538591,2543030..2543080,2567783..2567846)
location: region:2472148-2567846:1
so has part: feature:2472148-2472206:1:exon
so has part: feature:2474578-2474860:1:exon
so has part: feature:2477217-2477336:1:exon
so has part: feature:2485387-2485521:1:exon
so has part: feature:2486867-2486986:1:exon
so has part: feature:2490014-2490173:1:exon
so has part: feature:2497962-2498146:1:exon
so has part: feature:2502333-2503290:1:exon
so has part: feature:2504381-2504556:1:exon
so has part: feature:2516434-2516563:1:exon
so has part: feature:2538507-2538591:1:exon
so has part: feature:2543030-2543080:1:exon
so has part: feature:2567783-2567846:1:exon

XP_051898374.1
type: Protein
SIO_000068: ncbiprotein

position:2567846:1
position: 2567846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472148-2472206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2474578-2474860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2477217-2477336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485387-2485521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486867-2486986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2490014-2490173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2497962-2498146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502333-2503290:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2504381-2504556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2516434-2516563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2538507-2538591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543030-2543080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2567783-2567846:1:exon

LOC127585192
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585192
note: annexin A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2577981..2609997
location: region:2577981-2609997:1
so has part: feature:2577981-2609997:1:exon
subclass of: SO_0000010

127585192
type: Gene
SIO_000068: ncbigene

position:2577981:1
position: 2577981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609997:1
position: 2609997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2577981-2609997:1:exon

LOC127585192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: LOC127585192
product: annexin A2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042423.1
SIO_010081: LOC127585192
subclass of: SO_0000673
so part of: LOC127585192
location: join(2577981..2578076,2583149..2583216,2591580..2591667,2592784..2592878,2593941..2594054,2597331..2597421,2599182..2599261,2599792..2599851,2600760..2600853,2604546..2604641,2606921..2606979,2607394..2607513,2609505..2609997)
location: region:2577981-2609997:1
so has part: feature:2577981-2578076:1:exon
so has part: feature:2583149-2583216:1:exon
so has part: feature:2591580-2591667:1:exon
so has part: feature:2592784-2592878:1:exon
so has part: feature:2593941-2594054:1:exon
so has part: feature:2597331-2597421:1:exon
so has part: feature:2599182-2599261:1:exon
so has part: feature:2599792-2599851:1:exon
so has part: feature:2600760-2600853:1:exon
so has part: feature:2604546-2604641:1:exon
so has part: feature:2606921-2606979:1:exon
so has part: feature:2607394-2607513:1:exon
so has part: feature:2609505-2609997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2577981-2578076:1:exon

position:2578076:1
position: 2578076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2583149-2583216:1:exon

position:2583149:1
position: 2583149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2583216:1
position: 2583216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2591580-2591667:1:exon

position:2591580:1
position: 2591580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591667:1
position: 2591667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2592784-2592878:1:exon

position:2592784:1
position: 2592784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2592878:1
position: 2592878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2593941-2594054:1:exon

position:2593941:1
position: 2593941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594054:1
position: 2594054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2597331-2597421:1:exon

position:2597331:1
position: 2597331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597421:1
position: 2597421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2599182-2599261:1:exon

position:2599182:1
position: 2599182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2599261:1
position: 2599261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2599792-2599851:1:exon

position:2599792:1
position: 2599792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2599851:1
position: 2599851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2600760-2600853:1:exon

position:2600760:1
position: 2600760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2600853:1
position: 2600853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2604546-2604641:1:exon

position:2604546:1
position: 2604546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2604641:1
position: 2604641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2606921-2606979:1:exon

position:2606921:1
position: 2606921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606979:1
position: 2606979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2607394-2607513:1:exon

position:2607394:1
position: 2607394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2607513:1
position: 2607513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2609505-2609997:1:exon

position:2609505:1
position: 2609505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127585192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: LOC127585192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2-like
translation: MAKIRDLLAEVCLGGDEISAGATVKPFPNFVADSDAAVLLRAIETKGIDEHTIIDVLTSRSNAQRQDIAFAFERLGKKKLEDVLNSVLKEPLKAVILGLLKTPAKYDATEMKKAVKGMGTNEATLIEILCSRSNREIKEMNKVYEELFKKSMLSDIKDDTSGDFSKLLCALAKGNRSEPSNVEDYSLIDSDAQTLNEAVQQKKGMDTAKWISILTERSVPHLKRVFQRYNSYSPKTVSESIKEDLSKDLRCNLLALVQCIQSTPEFFADKLSPITKGDLKRDVLTRIMVSRCEIDLLSIRKEFKKKTGKSLHQCIKAATKDDYERVLLALCGGDD
SIO_010081: LOC127585192
subclass of: SO_0000673
so part of: LOC127585192
location: join(2583166..2583216,2591580..2591667,2592784..2592878,2593941..2594054,2597331..2597421,2599182..2599261,2599792..2599851,2600760..2600853,2604546..2604641,2606921..2606979,2607394..2607513,2609505..2609564)
location: region:2583166-2609564:1
so has part: feature:2583166-2583216:1:exon
so has part: feature:2591580-2591667:1:exon
so has part: feature:2592784-2592878:1:exon
so has part: feature:2593941-2594054:1:exon
so has part: feature:2597331-2597421:1:exon
so has part: feature:2599182-2599261:1:exon
so has part: feature:2599792-2599851:1:exon
so has part: feature:2600760-2600853:1:exon
so has part: feature:2604546-2604641:1:exon
so has part: feature:2606921-2606979:1:exon
so has part: feature:2607394-2607513:1:exon
so has part: feature:2609505-2609564:1:exon

XP_051898383.1
type: Protein
SIO_000068: ncbiprotein

position:2583166:1
position: 2583166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609564:1
position: 2609564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583166-2583216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2591580-2591667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2592784-2592878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2593941-2594054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2597331-2597421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2599182-2599261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2599792-2599851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2600760-2600853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2604546-2604641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606921-2606979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2607394-2607513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2609505-2609564:1:exon

foxb1a
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: foxb1a
note: forkhead box B1a; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3028490..3030162)
location: region:3028490-3030162:-1
so has part: feature:3028490-3030162:-1:exon
subclass of: SO_0000010

127585193
type: Gene
SIO_000068: ncbigene

position:3028490:-1
position: 3028490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3030162:-1
position: 3030162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028490-3030162:-1:exon

foxb1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: foxb1a
product: forkhead box B1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_052042425.1
SIO_010081: foxb1a
subclass of: SO_0000673
so part of: foxb1a
location: complement(3028490..3030162)
location: region:3028490-3030162:-1
so has part: feature:3028490-3030162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3028490-3030162:-1:exon

foxb1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: foxb1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein B1a
translation: MMPRPGRNTYSDQKPPYSYISLTAMAIQSSPDKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKRFKVMKADHLAVSKQSDATHYLQQQAKLRLSALAVSGTHLPQIPSYNMGVSQSTSFKHPFAIENIIAREYKNVMSSGLAFSAVQPMHAGYPMHSVGSPIGTAWPHMYSTSVMDTAPPLSVPSSDYSAYGVPIKPLCHGGQTLPAIPVPIKPSPATVPALPALPAPISAILSNSPATLSPTSPQIGNGQRSPSPSPGDTLTSAGAALQSVAVH
SIO_010081: foxb1a
subclass of: SO_0000673
so part of: foxb1a
location: complement(3028898..3029860)
location: region:3028898-3029860:-1
so has part: feature:3028898-3029860:-1:exon

XP_051898385.1
type: Protein
SIO_000068: ncbiprotein

position:3028898:-1
position: 3028898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029860:-1
position: 3029860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028898-3029860:-1:exon

LOC127585199
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: LOC127585199
note: uncharacterized LOC127585199; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3106464..3122305)
location: region:3106464-3122305:-1
so has part: feature:3106464-3122305:-1:exon
subclass of: SO_0000011

127585199
type: Gene
SIO_000068: ncbigene

position:3106464:-1
position: 3106464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122305:-1
position: 3122305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3106464-3122305:-1:exon

LOC127585199
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 685728
nc RNA class: lncRNA
gene: LOC127585199
product: uncharacterized LOC127585199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007958476.1
SIO_010081: LOC127585199
subclass of: SO_0000673
so part of: LOC127585199
location: complement(join(3106464..3108616,3116160..3116651,3122157..3122305))
location: region:3106464-3122305:-1
so has part: feature:3122157-3122305:-1:exon
so has part: feature:3116160-3116651:-1:exon
so has part: feature:3106464-3108616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3122157-3122305:-1:exon

position:3122157:-1
position: 3122157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3116160-3116651:-1:exon

position:3116160:-1
position: 3116160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116651:-1
position: 3116651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3106464-3108616:-1:exon

position:3108616:-1
position: 3108616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gtf2a2
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: gtf2a2
note: general transcription factor IIA, 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3152428..3175364)
location: region:3152428-3175364:-1
so has part: feature:3152428-3175364:-1:exon
subclass of: SO_0000010

127585198
type: Gene
SIO_000068: ncbigene

position:3152428:-1
position: 3152428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175364:-1
position: 3175364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152428-3175364:-1:exon

gtf2a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: gtf2a2
product: general transcription factor IIA, 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042431.1
SIO_010081: gtf2a2
subclass of: SO_0000673
so part of: gtf2a2
location: complement(join(3152428..3152702,3168797..3168923,3173915..3174019,3175237..3175364))
location: region:3152428-3175364:-1
so has part: feature:3175237-3175364:-1:exon
so has part: feature:3173915-3174019:-1:exon
so has part: feature:3168797-3168923:-1:exon
so has part: feature:3152428-3152702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3175237-3175364:-1:exon

position:3175237:-1
position: 3175237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3173915-3174019:-1:exon

position:3173915:-1
position: 3173915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174019:-1
position: 3174019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3168797-3168923:-1:exon

position:3168797:-1
position: 3168797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168923:-1
position: 3168923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3152428-3152702:-1:exon

position:3152702:-1
position: 3152702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gtf2a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: gtf2a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor IIA subunit 2
translation: MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINNALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNTGSNAAE
SIO_010081: gtf2a2
subclass of: SO_0000673
so part of: gtf2a2
location: complement(join(3152677..3152702,3168797..3168923,3173915..3174019,3175237..3175308))
location: region:3152677-3175308:-1
so has part: feature:3175237-3175308:-1:exon
so has part: feature:3173915-3174019:-1:exon
so has part: feature:3168797-3168923:-1:exon
so has part: feature:3152677-3152702:-1:exon

XP_051898391.1
type: Protein
SIO_000068: ncbiprotein

position:3152677:-1
position: 3152677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175308:-1
position: 3175308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3175237-3175308:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3173915-3174019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168797-3168923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3152677-3152702:-1:exon

rab8b
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: rab8b
note: RAB8B, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3175410..3274737
location: region:3175410-3274737:1
so has part: feature:3175410-3274737:1:exon
subclass of: SO_0000010

127585197
type: Gene
SIO_000068: ncbigene

position:3175410:1
position: 3175410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274737:1
position: 3274737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3175410-3274737:1:exon

rab8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: rab8b
product: RAB8B, member RAS oncogene family, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042430.1
SIO_010081: rab8b
subclass of: SO_0000673
so part of: rab8b
location: join(3175410..3175474,3258289..3258349,3261861..3261921,3262986..3263063,3267197..3267286,3267369..3267434,3269494..3269544,3271939..3274737)
location: region:3175410-3274737:1
so has part: feature:3175410-3175474:1:exon
so has part: feature:3258289-3258349:1:exon
so has part: feature:3261861-3261921:1:exon
so has part: feature:3262986-3263063:1:exon
so has part: feature:3267197-3267286:1:exon
so has part: feature:3267369-3267434:1:exon
so has part: feature:3269494-3269544:1:exon
so has part: feature:3271939-3274737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3175410-3175474:1:exon

position:3175474:1
position: 3175474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3258289-3258349:1:exon

position:3258289:1
position: 3258289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258349:1
position: 3258349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3261861-3261921:1:exon

position:3261861:1
position: 3261861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3261921:1
position: 3261921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3262986-3263063:1:exon

position:3262986:1
position: 3262986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3263063:1
position: 3263063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3267197-3267286:1:exon

position:3267197:1
position: 3267197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3267286:1
position: 3267286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3267369-3267434:1:exon

position:3267369:1
position: 3267369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3267434:1
position: 3267434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3269494-3269544:1:exon

position:3269494:1
position: 3269494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3269544:1
position: 3269544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271939-3274737:1:exon

position:3271939:1
position: 3271939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rab8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: rab8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B isoform X2
translation: MGSVWEPRGLLFLGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNRKMNENSPPGGSGQVKITAKNQSKKTSFFRCTLL
SIO_010081: rab8b
subclass of: SO_0000673
so part of: rab8b
location: join(3175435..3175474,3258289..3258349,3261861..3261921,3262986..3263063,3267197..3267286,3267369..3267434,3269494..3269544,3271939..3272034)
location: region:3175435-3272034:1
so has part: feature:3175435-3175474:1:exon
so has part: feature:3258289-3258349:1:exon
so has part: feature:3261861-3261921:1:exon
so has part: feature:3262986-3263063:1:exon
so has part: feature:3267197-3267286:1:exon
so has part: feature:3267369-3267434:1:exon
so has part: feature:3269494-3269544:1:exon
so has part: feature:3271939-3272034:1:exon

XP_051898390.1
type: Protein
SIO_000068: ncbiprotein

position:3175435:1
position: 3175435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3272034:1
position: 3272034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3175435-3175474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3258289-3258349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3261861-3261921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3262986-3263063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267197-3267286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267369-3267434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269494-3269544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271939-3272034:1:exon

rab8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: rab8b
product: RAB8B, member RAS oncogene family, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042429.1
SIO_010081: rab8b
subclass of: SO_0000673
so part of: rab8b
location: join(3218503..3218738,3258289..3258349,3261861..3261921,3262986..3263063,3267197..3267286,3267369..3267434,3269494..3269544,3271939..3274737)
location: region:3218503-3274737:1
so has part: feature:3218503-3218738:1:exon
so has part: feature:3258289-3258349:1:exon
so has part: feature:3261861-3261921:1:exon
so has part: feature:3262986-3263063:1:exon
so has part: feature:3267197-3267286:1:exon
so has part: feature:3267369-3267434:1:exon
so has part: feature:3269494-3269544:1:exon
so has part: feature:3271939-3274737:1:exon

position:3218503:1
position: 3218503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218503-3218738:1:exon

position:3218738:1
position: 3218738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3258289-3258349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3261861-3261921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3262986-3263063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267197-3267286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267369-3267434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269494-3269544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271939-3274737:1:exon

rab8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: rab8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B isoform X1
translation: MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNRKMNENSPPGGSGQVKITAKNQSKKTSFFRCTLL
SIO_010081: rab8b
subclass of: SO_0000673
so part of: rab8b
location: join(3218615..3218738,3258289..3258349,3261861..3261921,3262986..3263063,3267197..3267286,3267369..3267434,3269494..3269544,3271939..3272034)
location: region:3218615-3272034:1
so has part: feature:3218615-3218738:1:exon
so has part: feature:3258289-3258349:1:exon
so has part: feature:3261861-3261921:1:exon
so has part: feature:3262986-3263063:1:exon
so has part: feature:3267197-3267286:1:exon
so has part: feature:3267369-3267434:1:exon
so has part: feature:3269494-3269544:1:exon
so has part: feature:3271939-3272034:1:exon

XP_051898389.1
type: Protein
SIO_000068: ncbiprotein

position:3218615:1
position: 3218615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218615-3218738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3258289-3258349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3261861-3261921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3262986-3263063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267197-3267286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267369-3267434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269494-3269544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271939-3272034:1:exon

ca12
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: ca12
note: carbonic anhydrase XII; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3292409..3342932)
location: region:3292409-3342932:-1
so has part: feature:3292409-3342932:-1:exon
subclass of: SO_0000010

127585191
type: Gene
SIO_000068: ncbigene

position:3292409:-1
position: 3292409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342932:-1
position: 3342932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3292409-3342932:-1:exon

ca12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: ca12
product: carbonic anhydrase XII
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_052042422.1
SIO_010081: ca12
subclass of: SO_0000673
so part of: ca12
location: complement(join(3292409..3293397,3295170..3295251,3297637..3297669,3305989..3306112,3307645..3307802,3309452..3309515,3309612..3309707,3319594..3319736,3323765..3323944,3341746..3341766,3342773..3342932))
location: region:3292409-3342932:-1
so has part: feature:3342773-3342932:-1:exon
so has part: feature:3341746-3341766:-1:exon
so has part: feature:3323765-3323944:-1:exon
so has part: feature:3319594-3319736:-1:exon
so has part: feature:3309612-3309707:-1:exon
so has part: feature:3309452-3309515:-1:exon
so has part: feature:3307645-3307802:-1:exon
so has part: feature:3305989-3306112:-1:exon
so has part: feature:3297637-3297669:-1:exon
so has part: feature:3295170-3295251:-1:exon
so has part: feature:3292409-3293397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3342773-3342932:-1:exon

position:3342773:-1
position: 3342773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3341746-3341766:-1:exon

position:3341746:-1
position: 3341746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341766:-1
position: 3341766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3323765-3323944:-1:exon

position:3323765:-1
position: 3323765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323944:-1
position: 3323944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3319594-3319736:-1:exon

position:3319594:-1
position: 3319594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3319736:-1
position: 3319736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3309612-3309707:-1:exon

position:3309612:-1
position: 3309612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3309707:-1
position: 3309707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3309452-3309515:-1:exon

position:3309452:-1
position: 3309452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3309515:-1
position: 3309515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3307645-3307802:-1:exon

position:3307645:-1
position: 3307645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3307802:-1
position: 3307802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3305989-3306112:-1:exon

position:3305989:-1
position: 3305989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306112:-1
position: 3306112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3297637-3297669:-1:exon

position:3297637:-1
position: 3297637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3297669:-1
position: 3297669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3295170-3295251:-1:exon

position:3295170:-1
position: 3295170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3295251:-1
position: 3295251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3292409-3293397:-1:exon

position:3293397:-1
position: 3293397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ca12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: ca12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 12
translation: MALSRGAFLMLLLGISCRQRAGADSAWSYTGPQGEDHWASSYPYCGDVQQSPIDFHSGIFTYSPALEPIQLMGYNLSATQKLSLTNDGHAVKVSLPPTMHIISMSHRYTAVQLHLHWGSETDPVGSEHTISGRHYPSEMHIVHYNSEKYENASVAQDKVDGLAVLGILIQIGPFNAAYNHIFQHLKEIQHKDEEILIPGFNINDLLPRQLYEYFRYNGSLTTPPCYPSVQWTVFREPVQISSEQLLELESDLYFSNTTEKNQMGMVNNYRHVQELGEREVLISFPEAVNAGHTLTPGGVLIIALCCVLCIVSAFSLTVFFLKKRARKTTETRGVIYTAASAEDGPSEA
SIO_010081: ca12
subclass of: SO_0000673
so part of: ca12
location: complement(join(3293322..3293397,3295170..3295251,3297637..3297669,3305989..3306112,3307645..3307802,3309452..3309515,3309612..3309707,3319594..3319736,3323765..3323944,3341746..3341766,3342773..3342842))
location: region:3293322-3342842:-1
so has part: feature:3342773-3342842:-1:exon
so has part: feature:3341746-3341766:-1:exon
so has part: feature:3323765-3323944:-1:exon
so has part: feature:3319594-3319736:-1:exon
so has part: feature:3309612-3309707:-1:exon
so has part: feature:3309452-3309515:-1:exon
so has part: feature:3307645-3307802:-1:exon
so has part: feature:3305989-3306112:-1:exon
so has part: feature:3297637-3297669:-1:exon
so has part: feature:3295170-3295251:-1:exon
so has part: feature:3293322-3293397:-1:exon

XP_051898382.1
type: Protein
SIO_000068: ncbiprotein

position:3293322:-1
position: 3293322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342842:-1
position: 3342842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3342773-3342842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3341746-3341766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3323765-3323944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3319594-3319736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3309612-3309707:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309452-3309515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3307645-3307802:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3305989-3306112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3297637-3297669:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3295170-3295251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3293322-3293397:-1:exon

si:dkeyp-73b11.8
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: si:dkeyp-73b11.8
note: BPTI/Kunitz domain-containing protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3343315..3392981
location: region:3343315-3392981:1
so has part: feature:3343315-3392981:1:exon
subclass of: SO_0000010

127585195
type: Gene
SIO_000068: ncbigene

position:3343315:1
position: 3343315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3392981:1
position: 3392981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343315-3392981:1:exon

si:dkeyp-73b11.8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: si:dkeyp-73b11.8
product: BPTI/Kunitz domain-containing protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052042427.1
SIO_010081: si:dkeyp-73b11.8
subclass of: SO_0000673
so part of: si:dkeyp-73b11.8
location: join(3343315..3343497,3358055..3358135,3359914..3360152,3379061..3379252,3383293..3383466,3385175..3385219,3390428..3390515,3392882..3392981)
location: region:3343315-3392981:1
so has part: feature:3343315-3343497:1:exon
so has part: feature:3358055-3358135:1:exon
so has part: feature:3359914-3360152:1:exon
so has part: feature:3379061-3379252:1:exon
so has part: feature:3383293-3383466:1:exon
so has part: feature:3385175-3385219:1:exon
so has part: feature:3390428-3390515:1:exon
so has part: feature:3392882-3392981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343315-3343497:1:exon

position:3343497:1
position: 3343497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3358055-3358135:1:exon

position:3358055:1
position: 3358055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3358135:1
position: 3358135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3359914-3360152:1:exon

position:3359914:1
position: 3359914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360152:1
position: 3360152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3379061-3379252:1:exon

position:3379061:1
position: 3379061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379252:1
position: 3379252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3383293-3383466:1:exon

position:3383293:1
position: 3383293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3383466:1
position: 3383466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3385175-3385219:1:exon

position:3385175:1
position: 3385175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385219:1
position: 3385219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3390428-3390515:1:exon

position:3390428:1
position: 3390428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390515:1
position: 3390515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3392882-3392981:1:exon

position:3392882:1
position: 3392882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkeyp-73b11.8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: si:dkeyp-73b11.8
product: BPTI/Kunitz domain-containing protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052042428.1
SIO_010081: si:dkeyp-73b11.8
subclass of: SO_0000673
so part of: si:dkeyp-73b11.8
location: join(3343315..3343497,3358055..3358135,3359914..3360152,3379061..3379252,3383293..3383466,3385175..3385219,3392882..3392906)
location: region:3343315-3392906:1
so has part: feature:3343315-3343497:1:exon
so has part: feature:3358055-3358135:1:exon
so has part: feature:3359914-3360152:1:exon
so has part: feature:3379061-3379252:1:exon
so has part: feature:3383293-3383466:1:exon
so has part: feature:3385175-3385219:1:exon
so has part: feature:3392882-3392906:1:exon

position:3392906:1
position: 3392906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343315-3343497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3358055-3358135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3359914-3360152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3379061-3379252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3383293-3383466:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3385175-3385219:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3392882-3392906:1:exon

si:dkeyp-73b11.8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: si:dkeyp-73b11.8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BPTI/Kunitz domain-containing protein isoform X1
translation: MQNRHCVTQSLGLLVVHFMVLSLGQKPEACNLPVDEGQMGDNPSVNFYYNINTDRCNIFAYRGAGGNANRFATDKSCMRNCSDHADEIYPEGVQACLLPKDQGECKGRHLMFYFDLAKKKCKSFLYGGCGGNGNRFLLSGRCNEFCASWMGGAPGEADDESEVDEGLAVGLGMGCAVVVTFIVALAVFFTQRVKREQKPVRKNLEEPLTKGIEMK
SIO_010081: si:dkeyp-73b11.8
subclass of: SO_0000673
so part of: si:dkeyp-73b11.8
location: join(3360068..3360152,3379061..3379252,3383293..3383466,3385175..3385219,3390428..3390515,3392882..3392945)
location: region:3360068-3392945:1
so has part: feature:3360068-3360152:1:exon
so has part: feature:3379061-3379252:1:exon
so has part: feature:3383293-3383466:1:exon
so has part: feature:3385175-3385219:1:exon
so has part: feature:3390428-3390515:1:exon
so has part: feature:3392882-3392945:1:exon

XP_051898387.1
type: Protein
SIO_000068: ncbiprotein

position:3360068:1
position: 3360068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3392945:1
position: 3392945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3360068-3360152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3379061-3379252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3383293-3383466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385175-3385219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390428-3390515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3392882-3392945:1:exon

si:dkeyp-73b11.8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: si:dkeyp-73b11.8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BPTI/Kunitz domain-containing protein isoform X2
translation: MQNRHCVTQSLGLLVVHFMVLSLGQKPEACNLPVDEGQMGDNPSVNFYYNINTDRCNIFAYRGAGGNANRFATDKSCMRNCSDHADEIYPEGVQACLLPKDQGECKGRHLMFYFDLAKKKCKSFLYGGCGGNGNRFLLSGRCNEFCASWMGGAPGEADDESEVDEGNRSQ
SIO_010081: si:dkeyp-73b11.8
subclass of: SO_0000673
so part of: si:dkeyp-73b11.8
location: join(3360068..3360152,3379061..3379252,3383293..3383466,3385175..3385219,3392882..3392898)
location: region:3360068-3392898:1
so has part: feature:3360068-3360152:1:exon
so has part: feature:3379061-3379252:1:exon
so has part: feature:3383293-3383466:1:exon
so has part: feature:3385175-3385219:1:exon
so has part: feature:3392882-3392898:1:exon

XP_051898388.1
type: Protein
SIO_000068: ncbiprotein

position:3392898:1
position: 3392898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3360068-3360152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3379061-3379252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3383293-3383466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385175-3385219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3392882-3392898:1:exon

usp3
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: usp3
note: ubiquitin specific peptidase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3410062..3484012
location: region:3410062-3484012:1
so has part: feature:3410062-3484012:1:exon
subclass of: SO_0000010

127585188
type: Gene
SIO_000068: ncbigene

position:3410062:1
position: 3410062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484012:1
position: 3484012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410062-3484012:1:exon

usp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: usp3
product: ubiquitin specific peptidase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 13 Proteins
transcript id: XM_052042415.1
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410062..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3484012)
location: region:3410062-3484012:1
so has part: feature:3410062-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3484012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3410062-3410607:1:exon

position:3410607:1
position: 3410607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

position:3417595:1
position: 3417595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3417655:1
position: 3417655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

position:3421082:1
position: 3421082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3421219:1
position: 3421219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

position:3428076:1
position: 3428076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428159:1
position: 3428159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3454757-3454838:1:exon

position:3454757:1
position: 3454757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3454838:1
position: 3454838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3455771-3455853:1:exon

position:3455771:1
position: 3455771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3455853:1
position: 3455853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3460574-3460687:1:exon

position:3460574:1
position: 3460574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460687:1
position: 3460687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3461388-3461501:1:exon

position:3461388:1
position: 3461388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461501:1
position: 3461501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3462646-3462792:1:exon

position:3462646:1
position: 3462646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462792:1
position: 3462792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3462963-3463069:1:exon

position:3462963:1
position: 3462963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463069:1
position: 3463069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3463149-3463229:1:exon

position:3463149:1
position: 3463149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463229:1
position: 3463229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3469352-3469470:1:exon

position:3469352:1
position: 3469352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3469470:1
position: 3469470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3470030-3470143:1:exon

position:3470030:1
position: 3470030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470143:1
position: 3470143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3475212-3475279:1:exon

position:3475212:1
position: 3475212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475279:1
position: 3475279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3482132-3484012:1:exon

position:3482132:1
position: 3482132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

usp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: usp3
product: ubiquitin specific peptidase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042416.1
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410141..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3476130..3476208)
location: region:3410141-3476208:1
so has part: feature:3410141-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3476130-3476208:1:exon

position:3410141:1
position: 3410141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476208:1
position: 3476208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410141-3410607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3476130-3476208:1:exon

position:3476130:1
position: 3476130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

usp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: usp3
product: ubiquitin specific peptidase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042418.1
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410148..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3483978)
location: region:3410148-3483978:1
so has part: feature:3410148-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3483978:1:exon

position:3410148:1
position: 3410148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3483978:1
position: 3483978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410148-3410607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3482132-3483978:1:exon

usp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: usp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X1
translation: MECPHLATSVCIVPDSTKFPNGSPSSWCCAVCRSNKSPWVCLMCSSVHCGRYVNGHAKKHYEDSQIHSNNVKKSEKHEKEKLQHAVCMDCSSYSTYCYRCDDFVVNDTKMGLVQRVREHLQNLENSAFSADRHCKRKLMESSSMNNKYLKLNGGTSAICATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRSGKTAGRRTYHTRSQGDNSVSLVEEFRKTLCALWQGSQTAFCPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQRSYNGMTTSFILPDSSSISSSSKCCINGVSTVVTNIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQDNGPVCTLRDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKIDTYVEFPLRGLDMKCFLLEPENSGPECCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETVVKAKAYILFYVERHTKSGSGTKL
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410517..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3482300)
location: region:3410517-3482300:1
so has part: feature:3410517-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3482300:1:exon

XP_051898375.1
type: Protein
SIO_000068: ncbiprotein

position:3410517:1
position: 3410517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3482300:1
position: 3482300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410517-3410607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3482132-3482300:1:exon

usp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: usp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X4
translation: MECPHLATSVCIVPDSTKFPNGSPSSWCCAVCRSNKSPWVCLMCSSVHCGRYVNGHAKKHYEDSQIHSNNVKKSEKHEKEKLQHAVCMDCSSYSTYCYRCDDFVVNDTKMGLVQRVREHLQNLENNIQQFCCYFKELPAVELRSGKTAGRRTYHTRSQGDNSVSLVEEFRKTLCALWQGSQTAFCPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQRSYNGMTTSFILPDSSSISSSSKCCINGVSTVVTNIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQDNGPVCTLRDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKIDTYVEFPLRGLDMKCFLLEPENSGPECCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETVVKAKAYILFYVERHTKSGSGTKL
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410517..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3482300)
location: region:3410517-3482300:1
so has part: feature:3410517-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3482300:1:exon

XP_051898378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3410517-3410607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3482132-3482300:1:exon

usp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: usp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X2
translation: MECPHLATSVCIVPDSTKFPNGSPSSWCCAVCRSNKSPWVCLMCSSVHCGRYVNGHAKKHYEDSQIHSNNVKKSEKHEKEKLQHAVCMDCSSYSTYCYRCDDFVVNDTKMGLVQRVREHLQNLENSAFSADRHCKRKLMESSSMNNKYLKLNGGTSAICATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRSGKTAGRRTYHTRSQGDNSVSLVEEFRKTLCALWQGSQTAFCPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQRSYNGMTTSFILPDSSSISSSSKCCINGVSTVVTNIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQDNGPVCTLRDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKIDTYVEFPLRGLDMKCFLLEPENSGPECCLYDLAAVVVHHGSGTNVFTCWPVHSRCQSCGGAR
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410517..3410607,3417595..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3476130..3476193)
location: region:3410517-3476193:1
so has part: feature:3410517-3410607:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3476130-3476193:1:exon

XP_051898376.1
type: Protein
SIO_000068: ncbiprotein

position:3476193:1
position: 3476193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410517-3410607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3476130-3476193:1:exon

usp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: usp3
product: ubiquitin specific peptidase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042417.1
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3410873..3411147,3417595..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3483978)
location: region:3410873-3483978:1
so has part: feature:3410873-3411147:1:exon
so has part: feature:3417595-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3483978:1:exon

position:3410873:1
position: 3410873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410873-3411147:1:exon

position:3411147:1
position: 3411147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3417595-3417655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3482132-3483978:1:exon

usp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: usp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X3
translation: MCSSVHCGRYVNGHAKKHYEDSQIHSNNVKKSEKHEKEKLQHAVCMDCSSYSTYCYRCDDFVVNDTKMGLVQRVREHLQNLENSAFSADRHCKRKLMESSSMNNKYLKLNGGTSAICATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRSGKTAGRRTYHTRSQGDNSVSLVEEFRKTLCALWQGSQTAFCPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQRSYNGMTTSFILPDSSSISSSSKCCINGVSTVVTNIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQDNGPVCTLRDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKIDTYVEFPLRGLDMKCFLLEPENSGPECCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETVVKAKAYILFYVERHTKSGSGTKL
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3417630..3417655,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3482300)
location: region:3417630-3482300:1
so has part: feature:3417630-3417655:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3482300:1:exon

XP_051898377.1
type: Protein
SIO_000068: ncbiprotein

position:3417630:1
position: 3417630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417630-3417655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3482132-3482300:1:exon

usp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: usp3
product: ubiquitin specific peptidase 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052042419.1
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3419466..3419594,3421082..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3483978)
location: region:3419466-3483978:1
so has part: feature:3419466-3419594:1:exon
so has part: feature:3421082-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3483978:1:exon

position:3419466:1
position: 3419466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419466-3419594:1:exon

position:3419594:1
position: 3419594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3421082-3421219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3482132-3483978:1:exon

usp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: usp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X5
translation: MDCSSYSTYCYRCDDFVVNDTKMGLVQRVREHLQNLENSAFSADRHCKRKLMESSSMNNKYLKLNGGTSAICATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRSGKTAGRRTYHTRSQGDNSVSLVEEFRKTLCALWQGSQTAFCPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQRSYNGMTTSFILPDSSSISSSSKCCINGVSTVVTNIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQDNGPVCTLRDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKIDTYVEFPLRGLDMKCFLLEPENSGPECCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETVVKAKAYILFYVERHTKSGSGTKL
SIO_010081: usp3
subclass of: SO_0000673
so part of: usp3
location: join(3421191..3421219,3428076..3428159,3454757..3454838,3455771..3455853,3460574..3460687,3461388..3461501,3462646..3462792,3462963..3463069,3463149..3463229,3469352..3469470,3470030..3470143,3475212..3475279,3482132..3482300)
location: region:3421191-3482300:1
so has part: feature:3421191-3421219:1:exon
so has part: feature:3428076-3428159:1:exon
so has part: feature:3454757-3454838:1:exon
so has part: feature:3455771-3455853:1:exon
so has part: feature:3460574-3460687:1:exon
so has part: feature:3461388-3461501:1:exon
so has part: feature:3462646-3462792:1:exon
so has part: feature:3462963-3463069:1:exon
so has part: feature:3463149-3463229:1:exon
so has part: feature:3469352-3469470:1:exon
so has part: feature:3470030-3470143:1:exon
so has part: feature:3475212-3475279:1:exon
so has part: feature:3482132-3482300:1:exon

XP_051898379.1
type: Protein
SIO_000068: ncbiprotein

position:3421191:1
position: 3421191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3421191-3421219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3428076-3428159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3454757-3454838:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3455771-3455853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3460574-3460687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461388-3461501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462646-3462792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462963-3463069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3463149-3463229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3469352-3469470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3470030-3470143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3475212-3475279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3482132-3482300:1:exon

fbxl22
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: fbxl22
note: F-box and leucine-rich repeat protein 22; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3492558..3508482
location: region:3492558-3508482:1
so has part: feature:3492558-3508482:1:exon
subclass of: SO_0000010

127585194
type: Gene
SIO_000068: ncbigene

position:3492558:1
position: 3492558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3508482:1
position: 3508482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492558-3508482:1:exon

fbxl22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: fbxl22
product: F-box and leucine-rich repeat protein 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_052042426.1
SIO_010081: fbxl22
subclass of: SO_0000673
so part of: fbxl22
location: join(3492558..3493175,3505485..3508482)
location: region:3492558-3508482:1
so has part: feature:3492558-3493175:1:exon
so has part: feature:3505485-3508482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3492558-3493175:1:exon

position:3493175:1
position: 3493175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3505485-3508482:1:exon

position:3505485:1
position: 3505485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fbxl22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 685728
gene: fbxl22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box and leucine-rich protein 22
translation: MQLTDLNRECLLHIFSFLDKENRKSVSRTCQVLREVFHDPALWTLLCFSSLSELKKDNFLLSPALRSLSIHWHSSRVKVCNIEDWAKSSFQRDICGHHRTLVNSFLAEVSNRCPNLLSLTLSGCGHLTDGYITQILEKCTKLNTLKLENCARLTDKTLEAVAIYGSNLRTLHVDFCRNITQEGLDRICETCPSLSLSAEHSATMIPDQPDKCDSLGKGVKKRLLW
SIO_010081: fbxl22
subclass of: SO_0000673
so part of: fbxl22
location: join(3492841..3493175,3505485..3505827)
location: region:3492841-3505827:1
so has part: feature:3492841-3493175:1:exon
so has part: feature:3505485-3505827:1:exon

XP_051898386.1
type: Protein
SIO_000068: ncbiprotein

position:3492841:1
position: 3492841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505827:1
position: 3505827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492841-3493175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3505485-3505827:1:exon

herc1
type: Gene
subclass of: SO_0000704
RO_0002162: 685728
gene: herc1
note: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3518405..3797108)
location: region:3518405-3797108:-1
so has part: feature:3518405-3797108:-1:exon
subclass of: SO_0000010

127585135
type: Gene
SIO_000068: ncbigene

position:3518405:-1
position: 3518405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797108:-1
position: 3797108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3518405-3797108:-1:exon

herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042323.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
location: complement(join(3518405..3519068,3521837..3522142,3525591..3525743,3526294..3526546,3529733..3529809,3530122..3530287,3530424..3530593,3530700..3530869,3531885..3532023,3533180..3533349,3536495..3536597,3536818..3536940,3543701..3543856,3544605..3544786,3544906..3545044,3546402..3546527,3546610..3546675,3547664..3547957,3548078..3548251,3550782..3550883,3552139..3552285,3553197..3553317,3562960..3563159,3565720..3565850,3568069..3568269,3568434..3568567,3575859..3575986,3577810..3578066,3578479..3578692,3579968..3580235,3586911..3587085,3588955..3589155,3591361..3591413,3595963..3596231,3598367..3598587,3598963..3599084,3603366..3603594,3606264..3606380,3609176..3609336,3610819..3611017,3613999..3614795,3616809..3617323,3620335..3620418,3621592..3621831,3621971..3622147,3630460..3630570,3630813..3630919,3633615..3633770,3635471..3635643,3638480..3638717,3641196..3641316,3645125..3645340,3646245..3646513,3647549..3647614,3648252..3648303,3654876..3654996,3656989..3657310,3658939..3659110,3663665..3663785,3665108..3665222,3667658..3667831,3670747..3670968,3671179..3671370,3714132..3714264,3714356..3714508,3721269..3721484,3722729..3722854,3727796..3727961,3729031..3729165,3729253..3729424,3734788..3734932,3736881..3737008,3739470..3739613,3758267..3758363,3758609..3758920,3762241..3762435,3762717..3762812,3768268..3769223,3796945..3797108))
location: region:3518405-3797108:-1
so has part: feature:3796945-3797108:-1:exon
so has part: feature:3768268-3769223:-1:exon
so has part: feature:3762717-3762812:-1:exon
so has part: feature:3762241-3762435:-1:exon
so has part: feature:3758609-3758920:-1:exon
so has part: feature:3758267-3758363:-1:exon
so has part: feature:3739470-3739613:-1:exon
so has part: feature:3736881-3737008:-1:exon
so has part: feature:3734788-3734932:-1:exon
so has part: feature:3729253-3729424:-1:exon
so has part: feature:3729031-3729165:-1:exon
so has part: feature:3727796-3727961:-1:exon
so has part: feature:3722729-3722854:-1:exon
so has part: feature:3721269-3721484:-1:exon
so has part: feature:3714356-3714508:-1:exon
so has part: feature:3714132-3714264:-1:exon
so has part: feature:3671179-3671370:-1:exon
so has part: feature:3670747-3670968:-1:exon
so has part: feature:3667658-3667831:-1:exon
so has part: feature:3665108-3665222:-1:exon
so has part: feature:3663665-3663785:-1:exon
so has part: feature:3658939-3659110:-1:exon
so has part: feature:3656989-3657310:-1:exon
so has part: feature:3654876-3654996:-1:exon
so has part: feature:3648252-3648303:-1:exon
so has part: feature:3647549-3647614:-1:exon
so has part: feature:3646245-3646513:-1:exon
so has part: feature:3645125-3645340:-1:exon
so has part: feature:3641196-3641316:-1:exon
so has part: feature:3638480-3638717:-1:exon
so has part: feature:3635471-3635643:-1:exon
so has part: feature:3633615-3633770:-1:exon
so has part: feature:3630813-3630919:-1:exon
so has part: feature:3630460-3630570:-1:exon
so has part: feature:3621971-3622147:-1:exon
so has part: feature:3621592-3621831:-1:exon
so has part: feature:3620335-3620418:-1:exon
so has part: feature:3616809-3617323:-1:exon
so has part: feature:3613999-3614795:-1:exon
so has part: feature:3610819-3611017:-1:exon
so has part: feature:3609176-3609336:-1:exon
so has part: feature:3606264-3606380:-1:exon
so has part: feature:3603366-3603594:-1:exon
so has part: feature:3598963-3599084:-1:exon
so has part: feature:3598367-3598587:-1:exon
so has part: feature:3595963-3596231:-1:exon
so has part: feature:3591361-3591413:-1:exon
so has part: feature:3588955-3589155:-1:exon
so has part: feature:3586911-3587085:-1:exon
so has part: feature:3579968-3580235:-1:exon
so has part: feature:3578479-3578692:-1:exon
so has part: feature:3577810-3578066:-1:exon
so has part: feature:3575859-3575986:-1:exon
so has part: feature:3568434-3568567:-1:exon
so has part: feature:3568069-3568269:-1:exon
so has part: feature:3565720-3565850:-1:exon
so has part: feature:3562960-3563159:-1:exon
so has part: feature:3553197-3553317:-1:exon
so has part: feature:3552139-3552285:-1:exon
so has part: feature:3550782-3550883:-1:exon
so has part: feature:3548078-3548251:-1:exon
so has part: feature:3547664-3547957:-1:exon
so has part: feature:3546610-3546675:-1:exon
so has part: feature:3546402-3546527:-1:exon
so has part: feature:3544906-3545044:-1:exon
so has part: feature:3544605-3544786:-1:exon
so has part: feature:3543701-3543856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3796945-3797108:-1:exon

position:3796945:-1
position: 3796945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3768268-3769223:-1:exon

position:3768268:-1
position: 3768268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3769223:-1
position: 3769223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3762717-3762812:-1:exon

position:3762717:-1
position: 3762717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3762812:-1
position: 3762812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3762241-3762435:-1:exon

position:3762241:-1
position: 3762241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3762435:-1
position: 3762435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3758609-3758920:-1:exon

position:3758609:-1
position: 3758609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758920:-1
position: 3758920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3758267-3758363:-1:exon

position:3758267:-1
position: 3758267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758363:-1
position: 3758363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3739470-3739613:-1:exon

position:3739470:-1
position: 3739470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739613:-1
position: 3739613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3736881-3737008:-1:exon

position:3736881:-1
position: 3736881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3737008:-1
position: 3737008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3734788-3734932:-1:exon

position:3734788:-1
position: 3734788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3734932:-1
position: 3734932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3729253-3729424:-1:exon

position:3729253:-1
position: 3729253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3729424:-1
position: 3729424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3729031-3729165:-1:exon

position:3729031:-1
position: 3729031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3729165:-1
position: 3729165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3727796-3727961:-1:exon

position:3727796:-1
position: 3727796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727961:-1
position: 3727961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3722729-3722854:-1:exon

position:3722729:-1
position: 3722729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3722854:-1
position: 3722854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3721269-3721484:-1:exon

position:3721269:-1
position: 3721269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721484:-1
position: 3721484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3714356-3714508:-1:exon

position:3714356:-1
position: 3714356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714508:-1
position: 3714508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3714132-3714264:-1:exon

position:3714132:-1
position: 3714132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714264:-1
position: 3714264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3671179-3671370:-1:exon

position:3671179:-1
position: 3671179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671370:-1
position: 3671370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3670747-3670968:-1:exon

position:3670747:-1
position: 3670747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042328.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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location: region:3518405-3797072:-1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042322.1
SIO_010081: herc1
subclass of: SO_0000673
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042327.1
SIO_010081: herc1
subclass of: SO_0000673
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042326.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042332.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X18
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042340.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042325.1
SIO_010081: herc1
subclass of: SO_0000673
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042331.1
SIO_010081: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042330.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X15
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042337.1
SIO_010081: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042324.1
SIO_010081: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042329.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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herc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 685728
gene: herc1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X19
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052042341.1
SIO_010081: herc1
subclass of: SO_0000673
so part of: herc1
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