Pristis pectinata isolate sPriPec2 chromosome 32, sPriPec2.1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rhinopristiformes; Pristidae; Pristis.
REFSEQ INFORMATION: The reference sequence is identical to\nCM019886.1.\nAssembly name: sPriPec2.1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/19. The original whole-genome shotgun project has the\naccession WOXU00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 18-NOV-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-11-18; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: sPriPec2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.91x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_009764475.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon GAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
nicotinate-nucleotide pyrophosphorylase [carboxylating]-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
C-type lectin domain family 7 member A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 7 member A-like
Derived by automated computational analysis using gene prediction method: Gnomon.
lactamase, beta; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
serine beta-lactamase-like protein LACTB, mitochondrial isoform X3
COORDINATES: polyA evidence [ECO:0006239]
serine beta-lactamase-like protein LACTB, mitochondrial isoform X1
serine beta-lactamase-like protein LACTB, mitochondrial isoform X2
vimentin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
tropomyosin 1 (alpha); Derived by automated computational analysis using gene prediction method: Gnomon.
tropomyosin 1 (alpha), transcript variant X16
tropomyosin 1 (alpha), transcript variant X13
tropomyosin 1 (alpha), transcript variant X3
tropomyosin 1 (alpha), transcript variant X1
tropomyosin 1 (alpha), transcript variant X9
tropomyosin 1 (alpha), transcript variant X7
tropomyosin 1 (alpha), transcript variant X12
tropomyosin 1 (alpha), transcript variant X18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
tropomyosin 1 (alpha), transcript variant X17
tropomyosin 1 (alpha), transcript variant X6
tropomyosin 1 (alpha), transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
tropomyosin 1 (alpha), transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
tropomyosin 1 (alpha), transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
tropomyosin 1 (alpha), transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
tropomyosin 1 (alpha), transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
tropomyosin 1 (alpha), transcript variant X4
tropomyosin 1 (alpha), transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
tropomyosin 1 (alpha), transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
talin 2b; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins
translation initiation factor IF-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting 13 homolog C; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting 13 homolog C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 9 Proteins
vacuolar protein sorting 13 homolog C, transcript variant X3
vacuolar protein sorting 13 homolog C, transcript variant X1
intermembrane lipid transfer protein VPS13C isoform X3
intermembrane lipid transfer protein VPS13C isoform X1
intermembrane lipid transfer protein VPS13C isoform X2
maestro heat-like repeat-containing protein family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
maestro heat-like repeat-containing protein family member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized LOC127585159; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585200; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor ROR-alpha A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor ROR-alpha A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins
nuclear receptor ROR-alpha A-like, transcript variant X1
nuclear receptor ROR-alpha A-like isoform X2
nuclear receptor ROR-alpha A-like isoform X1
interactor of little elongator complex ELL subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
interactor of little elongator complex ELL subunit 2, transcript variant X1
interactor of little elongator complex ELL subunit 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
little elongation complex subunit 2 isoform X1
little elongation complex subunit 2 isoform X2
annexin A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
forkhead box B1a; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585199; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIA, 2; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription initiation factor IIA subunit 2
RAB8B, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB8B, member RAS oncogene family, transcript variant X2
RAB8B, member RAS oncogene family, transcript variant X1
carbonic anhydrase XII; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
BPTI/Kunitz domain-containing protein; Derived by automated computational analysis using gene prediction method: Gnomon.
BPTI/Kunitz domain-containing protein, transcript variant X1
BPTI/Kunitz domain-containing protein, transcript variant X2
BPTI/Kunitz domain-containing protein isoform X1
BPTI/Kunitz domain-containing protein isoform X2
ubiquitin specific peptidase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 13 Proteins
ubiquitin specific peptidase 3, transcript variant X2
ubiquitin specific peptidase 3, transcript variant X4
ubiquitin carboxyl-terminal hydrolase 3 isoform X1
ubiquitin carboxyl-terminal hydrolase 3 isoform X4
ubiquitin carboxyl-terminal hydrolase 3 isoform X2
ubiquitin specific peptidase 3, transcript variant X3
ubiquitin carboxyl-terminal hydrolase 3 isoform X3
ubiquitin specific peptidase 3, transcript variant X5
ubiquitin carboxyl-terminal hydrolase 3 isoform X5
F-box and leucine-rich repeat protein 22; Derived by automated computational analysis using gene prediction method: Gnomon.
F-box and leucine-rich repeat protein 22
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X2
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X7
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X6
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X5
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X11
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X18
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X4
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X10
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X9
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X15
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X3
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X19
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X17
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X13
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X14
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X12
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X16
probable E3 ubiquitin-protein ligase HERC1 isoform X7
probable E3 ubiquitin-protein ligase HERC1 isoform X1
probable E3 ubiquitin-protein ligase HERC1 isoform X6
probable E3 ubiquitin-protein ligase HERC1 isoform X5
probable E3 ubiquitin-protein ligase HERC1 isoform X11
probable E3 ubiquitin-protein ligase HERC1 isoform X18
probable E3 ubiquitin-protein ligase HERC1 isoform X4
probable E3 ubiquitin-protein ligase HERC1 isoform X10
probable E3 ubiquitin-protein ligase HERC1 isoform X9
probable E3 ubiquitin-protein ligase HERC1 isoform X15
probable E3 ubiquitin-protein ligase HERC1 isoform X3
probable E3 ubiquitin-protein ligase HERC1 isoform X8
probable E3 ubiquitin-protein ligase HERC1 isoform X19
probable E3 ubiquitin-protein ligase HERC1 isoform X17
probable E3 ubiquitin-protein ligase HERC1 isoform X13
probable E3 ubiquitin-protein ligase HERC1 isoform X14
probable E3 ubiquitin-protein ligase HERC1 isoform X12
probable E3 ubiquitin-protein ligase HERC1 isoform X16
probable E3 ubiquitin-protein ligase HERC1 isoform X2
death-associated protein kinase 2b; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
TBC1 domain family, member 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
TBC1 domain family, member 2B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 9 Proteins
TBC1 domain family, member 2B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins
SH2 domain containing 7; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium and integrin binding family member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium and integrin binding family member 2
calcium and integrin-binding family member 2
leucine rich repeat containing 61; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine-rich repeat-containing protein 61
isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha
isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
DnaJ heat shock protein family (Hsp40) member A; Derived by automated computational analysis using gene prediction method: Gnomon.
DnaJ heat shock protein family (Hsp40) member A
SKI8 subunit of superkiller complex; Derived by automated computational analysis using gene prediction method: Gnomon.
SKI8 subunit of superkiller complex protein
cellular retinoic acid binding protein 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
cellular retinoic acid binding protein 1a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
cellular retinoic acid-binding protein 1a
solute carrier family 25 member 44a; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: solute carrier family 25 member 44a
iron-responsive element binding protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
iron-responsive element binding protein 2
iron-responsive element-binding protein 2
hydroxylysine kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: hydroxylysine kinase-like
proteasome 20S subunit alpha 4; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: proteasome subunit alpha type-4
hydroxylysine kinase-like, transcript variant X1
hydroxylysine kinase-like, transcript variant X3
hydroxylysine kinase-like, transcript variant X2
uncharacterized LOC127585309; Derived by automated computational analysis using gene prediction method: Gnomon.
fibrillin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585360; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00004
Derived by automated computational analysis using gene prediction method: cmsearch.
deoxyuridine 5'-triphosphate nucleotidohydrolase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
deoxyuridine 5'-triphosphate nucleotidohydrolase-like
solute carrier family 12 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 12 member 1, transcript variant X1
solute carrier family 12 member 1, transcript variant X2
solute carrier family 12 member 1 isoform X2
solute carrier family 12 member 1 isoform X1
cortexin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
GRAM domain containing 2Aa; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 609-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc finger protein 609-like
thyroid hormone receptor interactor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: activating signal cointegrator 1
PCNA clamp associated factor; Derived by automated computational analysis using gene prediction method: Gnomon.
snurportin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins
protein tyrosine phosphatase non-receptor type 9a; Derived by automated computational analysis using gene prediction method: Gnomon.
protein tyrosine phosphatase non-receptor type 9a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins
tyrosine-protein phosphatase non-receptor type 9
SIN3 transcription regulator family member Aa; Derived by automated computational analysis using gene prediction method: Gnomon.
SIN3 transcription regulator family member Aa, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 25 Proteins
SIN3 transcription regulator family member Aa, transcript variant X1
SIN3 transcription regulator family member Aa
mannosidase, alpha, class 2C, member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
mannosidase, alpha, class 2C, member 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins
mannosidase, alpha, class 2C, member 1, transcript variant X1
uncharacterized LOC127585336; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin-27-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin-27-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins
sorting nexin-27-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
AP-3 complex subunit beta-2; Derived by automated computational analysis using gene prediction method: Gnomon.
AP-3 complex subunit beta-2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins
AP-3 complex subunit beta-2, transcript variant X3
AP-3 complex subunit beta-2, transcript variant X5
AP-3 complex subunit beta-2, transcript variant X1
AP-3 complex subunit beta-2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
cytoplasmic polyadenylation element-binding protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytoplasmic polyadenylation element-binding protein 1-like, transcript variant X1
cytoplasmic polyadenylation element-binding protein 1-like, transcript variant X2
cytoplasmic polyadenylation element-binding protein 1-like isoform X1
cytoplasmic polyadenylation element-binding protein 1-like isoform X2
cytoplasmic polyadenylation element-binding protein 1-like, transcript variant X3
cytoplasmic polyadenylation element-binding protein 1-like isoform X3
synaptic vesicle glycoprotein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptic vesicle glycoprotein 2, transcript variant X1
synaptic vesicle glycoprotein 2, transcript variant X2
synaptic vesicle glycoprotein 2, transcript variant X3
synaptic vesicle glycoprotein 2, transcript variant X4
synaptic vesicle glycoprotein 2C isoform X1
synaptic vesicle glycoprotein 2C isoform X2
synaptic vesicle glycoprotein 2C isoform X3
uncharacterized protein CFAP97D2; Derived by automated computational analysis using gene prediction method: Gnomon.
40S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585358; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585162; Derived by automated computational analysis using gene prediction method: Gnomon.
casein kinase I-like; Derived by automated computational analysis using gene prediction method: Gnomon.
casein kinase I-like, transcript variant X7
casein kinase I-like, transcript variant X12
casein kinase I-like, transcript variant X1
casein kinase I-like, transcript variant X8
casein kinase I-like, transcript variant X9
casein kinase I-like, transcript variant X11
casein kinase I-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins
casein kinase I-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins
casein kinase I-like, transcript variant X16
casein kinase I-like, transcript variant X2
casein kinase I-like, transcript variant X17
casein kinase I-like, transcript variant X5
casein kinase I-like, transcript variant X6
casein kinase I-like, transcript variant X13
casein kinase I-like, transcript variant X3
casein kinase I-like, transcript variant X4
casein kinase I-like, transcript variant X15
casein kinase I-like, transcript variant X18
casein kinase I-like, transcript variant X19
uncharacterized protein LOC100034462 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein LOC100034462 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
KTI12 chromatin associated homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
SEC11 homolog A, signal peptidase complex subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
SEC11 homolog A, signal peptidase complex subunit
signal peptidase complex catalytic subunit SEC11A
zinc finger protein 592; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 592, transcript variant X2
zinc finger protein 592, transcript variant X3
zinc finger protein 592, transcript variant X1
MALT paracaspase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
mucosa-associated lymphoid tissue lymphoma translocation protein 1
U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00026
solute carrier family 28 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 28 member 1, transcript variant X1
solute carrier family 28 member 1, transcript variant X2
semaphorin-7A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
semaphorin-4D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ornithine decarboxylase antizyme 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2-like
uncharacterized LOC127585346; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585321; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA-binding protein with multiple splicing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA-binding protein with multiple splicing 2
small ubiquitin-related modifier 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nei-like DNA glycosylase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nei-like DNA glycosylase 1, transcript variant X1
nei-like DNA glycosylase 1, transcript variant X2
COMM domain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: COMM domain-containing protein 4
uncharacterized LOC127585163; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC127585163
pneumococcal serine-rich repeat protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pneumococcal serine-rich repeat protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X1
pneumococcal serine-rich repeat protein-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X16
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X4
pneumococcal serine-rich repeat protein-like, transcript variant X3
pneumococcal serine-rich repeat protein-like, transcript variant X13
pneumococcal serine-rich repeat protein-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
pneumococcal serine-rich repeat protein-like, transcript variant X11
pneumococcal serine-rich repeat protein-like, transcript variant X5
pneumococcal serine-rich repeat protein-like, transcript variant X6
pneumococcal serine-rich repeat protein-like, transcript variant X8
pneumococcal serine-rich repeat protein-like, transcript variant X7
pneumococcal serine-rich repeat protein-like, transcript variant X12
pneumococcal serine-rich repeat protein-like, transcript variant X10
pneumococcal serine-rich repeat protein-like isoform X1
pneumococcal serine-rich repeat protein-like isoform X8
pneumococcal serine-rich repeat protein-like isoform X15
pneumococcal serine-rich repeat protein-like isoform X16
pneumococcal serine-rich repeat protein-like isoform X14
pneumococcal serine-rich repeat protein-like isoform X3
pneumococcal serine-rich repeat protein-like isoform X2
pneumococcal serine-rich repeat protein-like isoform X12
pneumococcal serine-rich repeat protein-like isoform X13
pneumococcal serine-rich repeat protein-like isoform X10
pneumococcal serine-rich repeat protein-like isoform X4
pneumococcal serine-rich repeat protein-like isoform X5
pneumococcal serine-rich repeat protein-like isoform X7
pneumococcal serine-rich repeat protein-like isoform X6
pneumococcal serine-rich repeat protein-like isoform X11
pneumococcal serine-rich repeat protein-like isoform X9
mucin-3A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 32 C15orf39 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 32 C15orf39 homolog, transcript variant X2
chromosome 32 C15orf39 homolog, transcript variant X11
chromosome 32 C15orf39 homolog, transcript variant X9
chromosome 32 C15orf39 homolog, transcript variant X1
chromosome 32 C15orf39 homolog, transcript variant X4
chromosome 32 C15orf39 homolog, transcript variant X5
chromosome 32 C15orf39 homolog, transcript variant X6
chromosome 32 C15orf39 homolog, transcript variant X7
chromosome 32 C15orf39 homolog, transcript variant X3
chromosome 32 C15orf39 homolog, transcript variant X8
chromosome 32 C15orf39 homolog, transcript variant X10
uncharacterized protein C15orf39 homolog isoform X1
uncharacterized protein C15orf39 homolog isoform X2
40S ribosomal protein S21-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
LOW QUALITY PROTEIN: 40S ribosomal protein S21-like
uncharacterized LOC127585260; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585261; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585261, transcript variant X2
uncharacterized LOC127585261, transcript variant X1
phosphopantothenoylcysteine decarboxylase; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphopantothenoylcysteine decarboxylase
neuroplastin b; Derived by automated computational analysis using gene prediction method: Gnomon.
CD276 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
inhibitory synaptic factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
inhibitory synaptic factor 1, transcript variant X1
inhibitory synaptic factor 1, transcript variant X2
inhibitory synaptic factor 1, transcript variant X3
U6atac minor spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00619
lysyl oxidase homolog 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 38 Proteins
secretory carrier-associated membrane protein 5; Derived by automated computational analysis using gene prediction method: Gnomon.
secretory carrier-associated membrane protein 5, transcript variant X3
secretory carrier-associated membrane protein 5, transcript variant X1
secretory carrier-associated membrane protein 5, transcript variant X8
secretory carrier-associated membrane protein 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
secretory carrier-associated membrane protein 5, transcript variant X7
secretory carrier-associated membrane protein 5, transcript variant X4
secretory carrier-associated membrane protein 5, transcript variant X6
secretory carrier-associated membrane protein 5, transcript variant X5
secretory carrier-associated membrane protein 5, transcript variant X9
secretory carrier-associated membrane protein 5 isoform X1
secretory carrier-associated membrane protein 5 isoform X2
secretory carrier-associated membrane protein 5 isoform X3
dual oxidase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
REC114 meiotic recombination protein; Derived by automated computational analysis using gene prediction method: Gnomon.
hyperpolarization activated cyclic nucleotide-gated potassium channel 4; Derived by automated computational analysis using gene prediction method: Gnomon.
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
pyruvate kinase M1/2a; Derived by automated computational analysis using gene prediction method: Gnomon.
protein mono-ADP-ribosyltransferase PARP6; Derived by automated computational analysis using gene prediction method: Gnomon.
protein mono-ADP-ribosyltransferase PARP6
CUGBP Elav-like family member 6; Derived by automated computational analysis using gene prediction method: Gnomon.
CUGBP Elav-like family member 6, transcript variant X6
CUGBP Elav-like family member 4 isoform X6
CUGBP Elav-like family member 6, transcript variant X4
CUGBP Elav-like family member 6, transcript variant X3
CUGBP Elav-like family member 6, transcript variant X2
CUGBP Elav-like family member 6, transcript variant X5
CUGBP Elav-like family member 6, transcript variant X1
CUGBP Elav-like family member 4 isoform X5
CUGBP Elav-like family member 4 isoform X4
CUGBP Elav-like family member 4 isoform X3
CUGBP Elav-like family member 4 isoform X2
CUGBP Elav-like family member 4 isoform X1
family with sequence similarity 219 member B; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 219 member B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads
family with sequence similarity 219 member B, transcript variant X3
family with sequence similarity 219 member B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins
cytochrome c oxidase subunit 5A, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome c oxidase subunit 5A, mitochondrial-like, transcript variant X2
cytochrome c oxidase subunit 5A, mitochondrial-like, transcript variant X1
cytochrome c oxidase subunit 5A, mitochondrial-like
ribonuclease P protein subunit p25-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease P protein subunit p25-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
AT-rich interactive domain-containing protein 3B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
AT-rich interactive domain-containing protein 3B-like, transcript variant X2
AT-rich interactive domain-containing protein 3B-like, transcript variant X3
AT-rich interactive domain-containing protein 3B-like isoform X2
AT-rich interactive domain-containing protein 3B-like, transcript variant X1
AT-rich interactive domain-containing protein 3B-like, transcript variant X4
AT-rich interactive domain-containing protein 3B-like, transcript variant X6
AT-rich interactive domain-containing protein 3B-like isoform X1
AT-rich interactive domain-containing protein 3A-like isoform X3
AT-rich interactive domain-containing protein 3B-like, transcript variant X7
AT-rich interactive domain-containing protein 3B-like, transcript variant X5
AT-rich interactive domain-containing protein 3B-like isoform X4
AT-rich interactive domain-containing protein 3B-like isoform X5
uncharacterized LOC127585352; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptotagmin-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
LOW QUALITY PROTEIN: synaptotagmin-4-like
protein lava lamp-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein lava lamp-like, transcript variant X2
protein lava lamp-like, transcript variant X1
enhancer of mRNA decapping 3 homolog (S. cerevisiae); Derived by automated computational analysis using gene prediction method: Gnomon.
enhancer of mRNA decapping 3 homolog (S. cerevisiae)
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 3
cytochrome P450 1A1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 183 Proteins
collagen and calcium-binding EGF domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
collagen and calcium-binding EGF domain-containing protein 1-like
C-terminal Src kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
C-terminal Src kinase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 35 Proteins
C-terminal Src kinase, transcript variant X4
C-terminal Src kinase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 35 Proteins
C-terminal Src kinase, transcript variant X3
C-terminal Src kinase, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 35 Proteins
protein ERGIC-53-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein ERGIC-53-like, transcript variant X2
protein ERGIC-53-like, transcript variant X1
complexin-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dual oxidase maturation factor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sorbitol dehydrogenase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sorbitol dehydrogenase-like, transcript variant X2
sorbitol dehydrogenase-like, transcript variant X1
sorbitol dehydrogenase-like, transcript variant X3
dual oxidase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
telomere repeat binding bouquet formation protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
telomere repeat binding bouquet formation protein 2
telomere repeats-binding bouquet formation protein 2
cholesterol side-chain cleavage enzyme, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cholesterol side-chain cleavage enzyme, mitochondrial-like
coiled-coil domain containing 33; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain-containing protein 33
uncharacterized LOC127585342; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585342, transcript variant X1
uncharacterized LOC127585342, transcript variant X2
signaling receptor and transporter of retinol STRA6; Derived by automated computational analysis using gene prediction method: Gnomon.
signaling receptor and transporter of retinol STRA6
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: receptor for retinol uptake stra6
immunoglobulin superfamily containing leucine-rich repeat 2; Derived by automated computational analysis using gene prediction method: Gnomon.
immunoglobulin superfamily containing leucine-rich repeat 2, transcript variant X1
immunoglobulin superfamily containing leucine-rich repeat 2, transcript variant X2
immunoglobulin superfamily containing leucine-rich repeat protein 2
stomatin (EPB72)-like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
stomatin (EPB72)-like 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins
stomatin (EPB72)-like 1, transcript variant X2
mannose phosphate isomerase; Derived by automated computational analysis using gene prediction method: Gnomon.
mannose phosphate isomerase, transcript variant X1
mannose phosphate isomerase, transcript variant X2
mannose-6-phosphate isomerase isoform X1
mannose-6-phosphate isomerase isoform X2
secretory carrier membrane protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
secretory carrier-associated membrane protein 2
unc-51 like kinase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
unc-51 like kinase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
unc-51 like kinase 3, transcript variant X1
unc-51 like kinase 3, transcript variant X3
serine/threonine-protein kinase ULK3 isoform X1
serine/threonine-protein kinase ULK3 isoform X2
uncharacterized LOC127585256; Derived by automated computational analysis using gene prediction method: Gnomon.
growth arrest-specific protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
F-box protein 22; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 15 Proteins
pro-neuregulin-4, membrane-bound isoform-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pro-neuregulin-4, membrane-bound isoform-like, transcript variant X1
pro-neuregulin-4, membrane-bound isoform-like isoform X1
pro-neuregulin-4, membrane-bound isoform-like, transcript variant X2
pro-neuregulin-4, membrane-bound isoform-like isoform X2
transmembrane protein 266; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 266, transcript variant X1
transmembrane protein 266, transcript variant X3
transmembrane protein 266, transcript variant X2
electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
electron transfer flavoprotein subunit alpha
electron transfer flavoprotein subunit alpha, mitochondrial
ISL LIM homeobox 2a; Derived by automated computational analysis using gene prediction method: Gnomon.
ISL LIM homeobox 2a, transcript variant X2
ISL LIM homeobox 2a, transcript variant X1
insulin gene enhancer protein isl-2a isoform X1
insulin gene enhancer protein isl-2a isoform X2
S-phase cyclin A-associated protein in the ER; Derived by automated computational analysis using gene prediction method: Gnomon.
S-phase cyclin A-associated protein in the ER, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins
S-phase cyclin A-associated protein in the ER, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins
S-phase cyclin A-associated protein in the ER, transcript variant X3
S-phase cyclin A-associated protein in the ER, transcript variant X4
S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2
S phase cyclin A-associated protein in the endoplasmic reticulum isoform X3
S phase cyclin A-associated protein in the endoplasmic reticulum isoform X4
reticulocalbin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
proline-serine-threonine phosphatase interacting protein 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 19 Proteins
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X2
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X3
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X4
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X7
proline-serine-threonine phosphatase-interacting protein 1a isoform X1
proline-serine-threonine phosphatase-interacting protein 1a isoform X2
proline-serine-threonine phosphatase-interacting protein 1a isoform X3
proline-serine-threonine phosphatase-interacting protein 1a isoform X4
proline-serine-threonine phosphatase-interacting protein 1a isoform X5
proline-serine-threonine phosphatase-interacting protein 1a isoform X6
proline-serine-threonine phosphatase-interacting protein 1a isoform X7
tetraspanin-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
high mobility group 20A; Derived by automated computational analysis using gene prediction method: Gnomon.
high mobility group 20A, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins
high mobility group protein 20A isoform X2
high mobility group 20A, transcript variant X4
high mobility group 20A, transcript variant X5
high mobility group 20A, transcript variant X2
high mobility group 20A, transcript variant X3
high mobility group 20A, transcript variant X1
high mobility group protein 20A isoform X1
high mobility group 20A, transcript variant X7
high mobility group protein 20A isoform X3
high mobility group 20A, transcript variant X8
high mobility group protein 20A isoform X4
pseudopodium-enriched atypical kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-like 7a (bone marrow stromal cell-derived); Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-like 7a (bone marrow stromal cell-derived)
neuronal acetylcholine receptor subunit alpha-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neuronal acetylcholine receptor subunit alpha-3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 Proteins
neuronal acetylcholine receptor subunit beta-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neuronal acetylcholine receptor subunit beta-4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 138 Proteins
SH2 domain-containing adapter protein F-like; Derived by automated computational analysis using gene prediction method: Gnomon.
SH2 domain-containing adapter protein F-like, transcript variant X1
SH2 domain-containing adapter protein F-like, transcript variant X2
SH2 domain-containing adapter protein F-like isoform X1
SH2 domain-containing adapter protein F-like isoform X2
family with sequence similarity 169 member B; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 169 member B
pyroglutamyl-peptidase I like; Derived by automated computational analysis using gene prediction method: Gnomon.
insulin-like growth factor 1a receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
insulin-like growth factor 1a receptor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins
insulin-like growth factor 1a receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 72 Proteins
synemin, intermediate filament protein; Derived by automated computational analysis using gene prediction method: Gnomon.
synemin, intermediate filament protein, transcript variant X2
synemin, intermediate filament protein, transcript variant X1
tetratricopeptide repeat domain 23; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 23, transcript variant X2
tetratricopeptide repeat protein 23 isoform X2
tetratricopeptide repeat domain 23, transcript variant X3
tetratricopeptide repeat domain 23, transcript variant X1
tetratricopeptide repeat protein 23 isoform X1
tetratricopeptide repeat protein 23 isoform X3
cocaine- and amphetamine-regulated transcript 3; Derived by automated computational analysis using gene prediction method: Gnomon.
cocaine- and amphetamine-regulated transcript 3
cocaine- and amphetamine-regulated transcript protein-like
calicin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin, gamma complex associated protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin, gamma complex associated protein 4, transcript variant X1
tubulin, gamma complex associated protein 4, transcript variant X2
gamma-tubulin complex component 4 isoform X1
gamma-tubulin complex component 4 isoform X2
tumor protein p53 binding protein, 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: TP53-binding protein 1
microtubule-associated protein 1Aa; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule-associated protein 1Aa, transcript variant X2
microtubule-associated protein 1Aa, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins
microtubule-associated protein 1A isoform X2
microtubule-associated protein 1B isoform X1
diphosphoinositol pentakisphosphate kinase 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X3
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X8
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X5
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X1
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X7
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X4
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X10
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X2
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X6
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 isoform X4
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X2
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X5
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 isoform X3
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X1
diphosphoinositol pentakisphosphate kinase 1a, transcript variant X11
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 isoform X7
creatine kinase U-type, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
creatine kinase U-type, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 121 Proteins
creatine kinase U-type, mitochondrial-like, transcript variant X4
creatine kinase U-type, mitochondrial-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 Proteins
creatine kinase U-type, mitochondrial-like, transcript variant X3
creatine kinase U-type, mitochondrial-like, transcript variant X2
creatine kinase U-type, mitochondrial-like
creatine kinase U-type, mitochondrial-like isoform X1
creatine kinase U-type, mitochondrial-like isoform X2
stereocilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein regulator of cytokinesis 1b; Derived by automated computational analysis using gene prediction method: Gnomon.
protein regulator of cytokinesis 1b, transcript variant X4
protein regulator of cytokinesis 1b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins
protein regulator of cytokinesis 1b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 12 Proteins
protein regulator of cytokinesis 1b, transcript variant X1
protein regulator of cytokinesis 1b isoform X2
protein regulator of cytokinesis 1b isoform X1
protein regulator of cytokinesis 1b isoform X4
protein regulator of cytokinesis 1b isoform X3
VPS33B late endosome and lysosome associated; Derived by automated computational analysis using gene prediction method: Gnomon.
VPS33B late endosome and lysosome associated, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
VPS33B late endosome and lysosome associated, transcript variant X2
VPS33B late endosome and lysosome associated, transcript variant X1
VPS33B late endosome and lysosome associated, transcript variant X3
vacuolar protein sorting-associated protein 33B isoform X2
vacuolar protein sorting-associated protein 33B isoform X1
HD domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
neugrin, neurite outgrowth associated; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins
tubulin polyglutamylase TTLL13-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
GDP-D-glucose phosphorylase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium and integrin-binding protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium and integrin-binding protein 1-like, transcript variant X2
calcium and integrin-binding protein 1-like, transcript variant X1
calcium and integrin-binding protein 1-like
RCC1 domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein unc-45 homolog A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
LOW QUALITY PROTEIN: protein unc-45 homolog A-like
protein shisa-like-1; Derived by automated computational analysis using gene prediction method: Gnomon.
mannosidase, alpha, class 2A, member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
mannosidase, alpha, class 2A, member 2, transcript variant X1
mannosidase, alpha, class 2A, member 2, transcript variant X2
FES proto-oncogene, tyrosine kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
FES proto-oncogene, tyrosine kinase, transcript variant X2
FES proto-oncogene, tyrosine kinase, transcript variant X1
tyrosine-protein kinase Fes/Fps isoform X1
tyrosine-protein kinase Fes/Fps isoform X2
furin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine incorporator 4; Derived by automated computational analysis using gene prediction method: Gnomon.
huntingtin interacting protein K; Derived by automated computational analysis using gene prediction method: Gnomon.
microfibril associated protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CREB regulated transcription coactivator 3; Derived by automated computational analysis using gene prediction method: Gnomon.
CREB regulated transcription coactivator 3, transcript variant X4
CREB regulated transcription coactivator 3, transcript variant X2
CREB regulated transcription coactivator 3, transcript variant X3
CREB regulated transcription coactivator 3, transcript variant X1
CREB-regulated transcription coactivator 3 isoform X4
CREB-regulated transcription coactivator 3 isoform X2
CREB-regulated transcription coactivator 3 isoform X3
CREB-regulated transcription coactivator 3 isoform X1
IQ motif containing GTPase activating protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
IQ motif containing GTPase activating protein 1
ras GTPase-activating-like protein IQGAP1
SUMO peptidase family member, NEDD8 specific; Derived by automated computational analysis using gene prediction method: Gnomon.
SUMO peptidase family member, NEDD8 specific, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
SUMO peptidase family member, NEDD8 specific, transcript variant X2
SUMO peptidase family member, NEDD8 specific, transcript variant X3
SUMO peptidase family member, NEDD8 specific, transcript variant X1
myosin IXAa; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins
nuclear receptor subfamily 2, group E, member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 2, group E, member 3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
LOW QUALITY PROTEIN: photoreceptor-specific nuclear receptor
leucine rich repeat and Ig domain containing 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine rich repeat and Ig domain containing 1a, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins
leucine rich repeat and Ig domain containing 1a, transcript variant X3
leucine rich repeat and Ig domain containing 1a, transcript variant X8
leucine rich repeat and Ig domain containing 1a, transcript variant X2
leucine rich repeat and Ig domain containing 1a, transcript variant X9
leucine rich repeat and Ig domain containing 1a, transcript variant X5
leucine rich repeat and Ig domain containing 1a, transcript variant X4
leucine rich repeat and Ig domain containing 1a, transcript variant X1
leucine rich repeat and Ig domain containing 1a, transcript variant X10
leucine rich repeat and Ig domain containing 1a, transcript variant X14
leucine rich repeat and Ig domain containing 1a, transcript variant X6
leucine rich repeat and Ig domain containing 1a, transcript variant X11
leucine rich repeat and Ig domain containing 1a, transcript variant X13
leucine rich repeat and Ig domain containing 1a, transcript variant X12
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
uncharacterized LOC127585227; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin 33; Derived by automated computational analysis using gene prediction method: Gnomon.
chondroitin sulfate proteoglycan 4; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase ARIH1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 16 Proteins
Bardet-Biedl syndrome 4; Derived by automated computational analysis using gene prediction method: Gnomon.
Bardet-Biedl syndrome 4, transcript variant X1
Bardet-Biedl syndrome 4, transcript variant X2
Bardet-Biedl syndrome 4 protein isoform X1
Bardet-Biedl syndrome 4 protein isoform X2
neogenin 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
40S ribosomal protein S2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins
ADP-dependent glucokinase; Derived by automated computational analysis using gene prediction method: Gnomon.
ADP-dependent glucokinase, transcript variant X2
ADP-dependent glucokinase, transcript variant X1
ADP-dependent glucokinase, transcript variant X3
ADP-dependent glucokinase, transcript variant X4
small nucleolar RNA U3; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00012
leucine-rich repeat-containing protein 49; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine-rich repeat-containing protein 49, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
leucine-rich repeat-containing protein 49, transcript variant X1
leucine-rich repeat-containing protein 49, transcript variant X3
leucine-rich repeat-containing protein 49 isoform X2
leucine-rich repeat-containing protein 49 isoform X1
leucine-rich repeat-containing protein 49 isoform X3
La ribonucleoprotein 6, translational regulator a; Derived by automated computational analysis using gene prediction method: Gnomon.
La ribonucleoprotein 6, translational regulator a, transcript variant X1
La ribonucleoprotein 6, translational regulator a, transcript variant X2
TM2 domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
TM2 domain containing 3, transcript variant X2
TM2 domain containing 3, transcript variant X1
TM2 domain-containing protein 3 isoform X2
TM2 domain-containing protein 3 isoform X1
tight junction protein 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
tight junction protein 1a, transcript variant X7
tight junction protein 1a, transcript variant X1
tight junction protein 1a, transcript variant X2
tight junction protein 1a, transcript variant X5
tight junction protein 1a, transcript variant X6
tight junction protein 1a, transcript variant X3
tight junction protein 1a, transcript variant X4
family with sequence similarity 189 member A1; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 189 member A1, transcript variant X1
family with sequence similarity 189 member A1, transcript variant X2
amyloid beta (A4) precursor protein-binding, family A, member 2b; Derived by automated computational analysis using gene prediction method: Gnomon.
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X5
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X6
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X4
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X2
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X3
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X1
amyloid-beta A4 precursor protein-binding family A member 2 isoform X2
amyloid-beta A4 precursor protein-binding family A member 2 isoform X3
amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein); Derived by automated computational analysis using gene prediction method: Gnomon.
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
U3 small nucleolar ribonucleoprotein protein MPP10
FANCD2 and FANCI associated nuclease 1; Derived by automated computational analysis using gene prediction method: Gnomon.
myotubularin related protein 10; Derived by automated computational analysis using gene prediction method: Gnomon.
myotubularin related protein 10, transcript variant X2
myotubularin related protein 10, transcript variant X1
transient receptor potential cation channel, subfamily M, member 1a; Derived by automated computational analysis using gene prediction method: Gnomon.
transient receptor potential cation channel, subfamily M, member 1a
transient receptor potential cation channel subfamily M member 1a
OTU deubiquitinase 7A; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
OTU deubiquitinase 7A, transcript variant X3
OTU deubiquitinase 7A, transcript variant X1
OTU domain-containing protein 7A isoform X3
OTU domain-containing protein 7A isoform X1
OTU domain-containing protein 7A isoform X2
uncharacterized LOC127585295; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585315; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127585315, transcript variant X3
uncharacterized LOC127585315, transcript variant X2
uncharacterized LOC127585315, transcript variant X1
uncharacterized protein LOC127585315 isoform X1
uncharacterized protein LOC127585315 isoform X2