Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Complete genome sequencing of Azospirillum sp. M2T2B2
Submitted (04-JUN-2018) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP029834.1.\nBacteria and source DNA available from KACC.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: FEB-2018\nAssembly Method :: RS HGAP Assembly v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 154.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 03:16:43\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,633\nCDSs (total) :: 5,517\nGenes (coding) :: 5,451\nCDSs (with protein) :: 5,451\nGenes (RNA) :: 116\nrRNAs :: 9, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 10, 10 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 22 of 66\nPseudo Genes (incomplete) :: 52 of 66\nPseudo Genes (internal stop) :: 5 of 66\nPseudo Genes (multiple problems) :: 12 of 66\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014250167.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019461923.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250165.1
COORDINATES: similar to AA sequence:RefSeq:WP_012332430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012605349.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014250162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012778969.1
TIGR04295 family B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250160.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250159.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250156.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978269.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250154.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250153.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_012978272.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_014250151.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_012978274.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250149.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014197874.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250146.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014250145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911384.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978277.1
GO:0043169 - cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250142.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250139.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250138.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014250137.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250136.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250133.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250132.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_014250131.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012978285.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978286.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250128.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250127.1
amino acid--[acyl-carrier-protein] ligase
COORDINATES: similar to AA sequence:RefSeq:WP_014250126.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250125.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250124.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250123.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250122.1
GO:0016813 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250121.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250120.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250119.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250118.1
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014250117.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978299.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272579.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250114.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012978302.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250112.1
COORDINATES: similar to AA sequence:RefSeq:WP_012482329.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250108.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250107.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250106.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250105.1
COORDINATES: similar to AA sequence:RefSeq:WP_019459271.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250104.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978311.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978312.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250101.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978314.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978315.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978316.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250098.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250097.1
COORDINATES: similar to AA sequence:RefSeq:WP_006336017.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250095.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250094.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250092.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250090.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189597.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250088.1
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250087.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978329.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250085.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566635.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250083.1
MlaE family lipid ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012978333.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978334.1
GO:0015914 - phospholipid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250080.1
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250078.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250077.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF016242.2
COORDINATES: similar to AA sequence:RefSeq:WP_012978340.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198608.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250073.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250072.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978349.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978350.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_014250068.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250067.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250066.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014250065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250064.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012978523.1
GO:0008718 - D-amino-acid dehydrogenase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0055130 - D-alanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978522.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250061.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0019516 - lactate oxidation [Evidence IEA]
LutB/LldF family L-lactate oxidation iron-sulfur protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250060.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250059.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250058.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250057.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014250056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250055.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250054.1
GO:0004108 - citrate (Si)-synthase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250053.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250052.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250051.1
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_014250050.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249585.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250049.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250048.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250047.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250046.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250045.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250044.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250043.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_014250042.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250041.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250040.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
Bcr/CflA family multidrug efflux MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014250039.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250038.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250037.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014250036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250035.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250034.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250033.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250032.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250030.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978450.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250026.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250025.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250024.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250022.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250021.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250020.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250017.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978442.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250015.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250014.1
COORDINATES: similar to AA sequence:RefSeq:WP_014752861.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010567825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250011.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250010.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250009.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978434.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
MerR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_014250006.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978429.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250005.1
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0006782 - protoporphyrinogen IX biosynthetic process [Evidence IEA]; GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250004.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250003.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250002.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240049.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_014249999.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249998.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_014249997.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249996.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978418.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249994.1
lipid-A-disaccharide synthase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249993.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249992.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978414.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978413.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249989.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease LivH
COORDINATES: similar to AA sequence:RefSeq:WP_014189441.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_014189440.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978041.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249987.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249986.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249985.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249984.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978406.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249978.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_014249977.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006048735.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249975.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249972.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249971.1
nitric oxide reductase transcriptional regulator NorR
COORDINATES: similar to AA sequence:RefSeq:WP_012978531.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797104.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249948.1
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249947.1
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249946.1
COORDINATES: similar to AA sequence:RefSeq:WP_008972510.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978355.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249942.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012650273.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249940.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249939.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978365.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249936.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249935.1
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249931.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249930.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249929.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249928.1
COORDINATES: protein motif:HMM:NF037279.2
WcbI family polysaccharide biosynthesis putative acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012978373.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008062490.1
ferric reductase-like transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978380.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_014249920.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249919.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_014249918.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249916.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249915.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249914.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249913.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249912.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249910.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249909.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008263 - pyrimidine-specific mismatch base pair DNA N-glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978461.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014249905.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978463.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976156.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014596382.1
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017362037.1
benzoate 1,2-dioxygenase electron transfer component BenC
COORDINATES: similar to AA sequence:RefSeq:WP_004374327.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012113152.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012653234.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]
GO:0019615 - catechol catabolic process, ortho-cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013206109.1
GO:0016159 - muconolactone delta-isomerase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012113150.1
GO:0018850 - chloromuconate cycloisomerase activity [Evidence IEA]; GO:0018849 - muconate cycloisomerase activity [Evidence IEA]
muconate/chloromuconate family cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012976151.1
COORDINATES: similar to AA sequence:RefSeq:WP_010687028.1
COORDINATES: similar to AA sequence:RefSeq:WP_011504894.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013165314.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978267.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014249900.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249899.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978264.1
flagellar type III secretion system protein FlhB
COORDINATES: similar to AA sequence:RefSeq:WP_014249897.1
GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249896.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249893.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978255.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249891.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_011089613.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249889.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249888.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249887.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249886.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249885.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249884.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249883.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249882.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978244.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249880.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249879.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249878.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249877.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249876.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249875.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249874.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_014249873.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249872.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249871.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_012978233.1
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978231.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249866.1
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_014249865.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249864.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249863.1
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_014249862.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_014249861.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978223.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249859.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249858.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249857.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249856.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249855.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249854.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249853.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
flagellar basal body P-ring protein FlgI
COORDINATES: similar to AA sequence:RefSeq:WP_012978215.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249851.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978213.1
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_014189972.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_012978160.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014250244.1
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250243.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250242.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250241.1
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016807.2
GO:0009882 - blue light photoreceptor activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250240.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250237.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250236.1
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250234.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977901.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014250231.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014250225.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250224.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250223.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011388514.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250221.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014250219.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250218.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250217.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: similar to AA sequence:RefSeq:WP_014250216.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250215.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012978154.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250208.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250207.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250206.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250205.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250204.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250203.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009491979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250200.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014528197.1
COORDINATES: similar to AA sequence:RefSeq:WP_018485620.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978505.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250195.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978502.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250192.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250191.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250190.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012042350.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978497.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250186.1
galactofuranose ABC transporter, galactofuranose-binding protein YtfQ
COORDINATES: similar to AA sequence:RefSeq:WP_014250185.1
galactofuranose ABC transporter, ATP-binding protein YtfR
COORDINATES: similar to AA sequence:RefSeq:WP_012978493.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199938.1
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_014250182.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250181.1
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250179.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250178.1
GO:0015414 - ABC-type nitrate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015706 - nitrate transmembrane transport [Evidence IEA]
This model describes the ATP binding subunits of ATP-binding cassette (ABC) transporters for nitrate transport, or for bicarbonate transport, in bacteria and archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
nitrate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250177.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250175.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250174.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250173.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250172.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250171.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014250170.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250169.1
saccharopine dehydrogenase NADP-binding domain-containing protein