Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Complete genome sequencing of Azospirillum sp. M2T2B2
Submitted (04-JUN-2018) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP029833.1.\nBacteria and source DNA available from KACC.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: FEB-2018\nAssembly Method :: RS HGAP Assembly v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 154.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 03:16:43\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,633\nCDSs (total) :: 5,517\nGenes (coding) :: 5,451\nCDSs (with protein) :: 5,451\nGenes (RNA) :: 116\nrRNAs :: 9, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 10, 10 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 22 of 66\nPseudo Genes (incomplete) :: 52 of 66\nPseudo Genes (internal stop) :: 5 of 66\nPseudo Genes (multiple problems) :: 12 of 66\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014189658.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014189657.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977813.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977814.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189654.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189653.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189652.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189651.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977819.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189647.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014189646.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189644.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189642.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189641.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014189640.1
COORDINATES: similar to AA sequence:RefSeq:WP_020085589.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]; GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189637.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189636.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189635.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197749.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_008877458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189632.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189631.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189630.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189629.1
GO:0016756 - glutathione gamma-glutamylcysteinyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0046938 - phytochelatin biosynthetic process [Evidence IEA]; GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189628.1
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189627.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189625.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189624.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977880.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977881.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189621.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977883.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189619.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977885.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189617.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189616.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_012977889.1
ActR/PrrA/RegA family redox response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_014189609.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
ActS/PrrB/RegB family redox-sensitive histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014189608.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189607.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189606.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189605.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189604.1
manganese efflux pump MntP family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014189603.1
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977899.1
COORDINATES: protein motif:HMM:NF013767.2
GO:0009927 - histidine phosphotransfer kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189598.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189597.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189595.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977910.1
COORDINATES: similar to AA sequence:RefSeq:WP_007795301.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189592.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189591.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189590.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189589.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189588.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189587.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977845.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014189584.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189583.1
COORDINATES: protein motif:HMM:NF012592.2
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977839.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_012977838.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_012977837.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_014198364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189576.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977834.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189574.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008164821.1
D-2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189573.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189572.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189571.1
delta(1)-pyrroline-2-carboxylate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977868.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977867.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189567.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977865.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189565.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977862.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189563.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189561.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189559.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977856.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189556.1
COORDINATES: similar to AA sequence:RefSeq:WP_020183324.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189554.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189551.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189549.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189548.1
COORDINATES: similar to AA sequence:RefSeq:WP_018044181.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977916.1
NahK/ErcS family hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977917.1
GO:0035991 - nitric oxide sensor activity [Evidence IEA]
GO:0046209 - nitric oxide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977918.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183708.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189540.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189539.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012252186.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189537.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189535.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189534.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189533.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189532.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014189531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189529.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189528.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189526.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977926.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189523.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189522.1
GO:0015019 - heparan-alpha-glucosaminide N-acetyltransferase activity [Evidence IEA]
GO:0007041 - lysosomal transport [Evidence IEA]
heparan-alpha-glucosaminide N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189521.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014197174.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_014189518.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189516.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189515.1
GO:0004601 - peroxidase activity [Evidence IEA]; GO:0051920 - peroxiredoxin activity [Evidence IEA]
GO:0006972 - hyperosmotic response [Evidence IEA]; GO:0033194 - response to hydroperoxide [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977801.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189513.1
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189512.1
GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity [Evidence IEA]
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
1,2-phenylacetyl-CoA epoxidase subunit PaaA
COORDINATES: similar to AA sequence:RefSeq:WP_011453779.1
1,2-phenylacetyl-CoA epoxidase subunit PaaB
COORDINATES: similar to AA sequence:RefSeq:WP_014189510.1
1,2-phenylacetyl-CoA epoxidase subunit PaaC
COORDINATES: similar to AA sequence:RefSeq:WP_014189509.1
1,2-phenylacetyl-CoA epoxidase subunit PaaD
COORDINATES: similar to AA sequence:RefSeq:WP_014189508.1
1,2-phenylacetyl-CoA epoxidase subunit PaaE
COORDINATES: similar to AA sequence:RefSeq:WP_014189507.1
phenylacetic acid degradation protein PaaN
COORDINATES: similar to AA sequence:RefSeq:WP_012977791.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
COORDINATES: similar to AA sequence:RefSeq:WP_011746546.1
GO:0008691 - 3-hydroxybutyryl-CoA dehydrogenase activity [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]; GO:0010124 - phenylacetate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010106649.1
hydroxyphenylacetyl-CoA thioesterase PaaI
COORDINATES: similar to AA sequence:RefSeq:WP_014189503.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189502.1
GO:0047475 - phenylacetate-CoA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977787.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189712.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977785.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977784.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189716.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189717.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977780.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010343054.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_014189720.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199987.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189726.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977771.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189728.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977769.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977768.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010337573.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977766.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189732.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977764.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_014189734.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189735.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977761.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189737.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189738.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189739.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977978.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189741.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977980.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_014189743.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189744.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189745.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189746.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977985.1
COORDINATES: similar to AA sequence:RefSeq:WP_007857251.1
GO:0005886 - plasma membrane [Evidence IEA]
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198183.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977988.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011156993.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189753.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977992.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189755.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977994.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189759.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189760.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:YP_002517801.2
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189761.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189762.1
COORDINATES: similar to AA sequence:RefSeq:WP_007685215.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007114061.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189812.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189813.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189814.1
GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO:0018874 - benzoate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977702.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973958.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189819.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189820.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189822.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188047.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012973953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973952.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012973951.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189826.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189827.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189828.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189829.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189830.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189831.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_014189832.1
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
COORDINATES: similar to AA sequence:RefSeq:WP_014239038.1
GO:0030234 - enzyme regulator activity [Evidence IEA]
GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189835.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014189836.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189837.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
zinc ABC transporter permease subunit ZnuB
COORDINATES: similar to AA sequence:RefSeq:WP_014189838.1
GO:0015633 - ABC-type zinc transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006829 - zinc ion transport [Evidence IEA]
zinc ABC transporter ATP-binding protein ZnuC
COORDINATES: similar to AA sequence:RefSeq:WP_014189839.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein ZnuA
COORDINATES: similar to AA sequence:RefSeq:WP_013592781.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS5-like element ISAzba7 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_012977713.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014189841.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189843.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189844.1
GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189845.1
short-chain fatty acyl-CoA regulator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977719.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189847.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189848.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189849.1
prephenate/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189850.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_016805482.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189852.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_014189972.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012888.2
GO:0008146 - sulfotransferase activity [Evidence IEA]
sulfotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189268.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189269.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189270.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189271.1
GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189272.1
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189273.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189275.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189276.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973907.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977699.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019644740.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977697.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189282.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189284.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189285.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189286.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189287.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012977690.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189289.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977685.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977684.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189295.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012977682.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014189297.1
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014189298.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189302.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014820165.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189305.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006394036.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012978083.1
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189308.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189309.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189313.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978088.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240867.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978090.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189317.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189320.1
GO:0016853 - isomerase activity [Evidence IEA]
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189321.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
threo-3-hydroxy-L-aspartate ammonia-lyase
COORDINATES: similar to AA sequence:RefSeq:WP_014189322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189323.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189326.1
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189327.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189328.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189329.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012975309.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189331.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016744714.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189333.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012496873.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189335.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189336.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189337.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189339.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978114.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189340.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189341.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189342.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978118.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189344.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189345.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189346.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978122.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978123.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189350.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189351.1
COORDINATES: similar to AA sequence:RefSeq:WP_011567371.1
COORDINATES: similar to AA sequence:RefSeq:WP_008559212.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189354.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189357.1
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978139.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189366.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978144.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978145.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189371.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189372.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977636.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189377.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977639.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189379.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189380.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189381.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189382.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189383.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189384.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189385.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189386.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977647.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189389.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189390.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189391.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189392.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977651.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189395.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189396.1
COORDINATES: protein motif:HMM:NF024858.2
COORDINATES: similar to AA sequence:RefSeq:WP_012977654.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189399.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189400.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189401.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189402.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189403.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189404.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189406.1
COORDINATES: similar to AA sequence:RefSeq:WP_012317416.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189411.1
sodium-dependent bicarbonate transport family permease
COORDINATES: similar to AA sequence:RefSeq:WP_014189412.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189413.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199911.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_014189415.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977668.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189417.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977670.1
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_014189419.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020400367.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020400365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189420.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978082.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978081.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189423.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189424.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189425.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189426.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014189427.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014189430.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189431.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189432.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012978049.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978047.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189436.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189437.1
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189438.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978041.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189440.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189441.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_014249989.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease LivH
COORDINATES: similar to AA sequence:RefSeq:WP_014189445.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189450.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002719894.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189452.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189453.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189455.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189456.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189457.1
TerB family tellurite resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189460.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189461.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189462.1
COORDINATES: similar to AA sequence:RefSeq:WP_011841628.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189464.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189465.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189466.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189471.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189472.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046487 - glyoxylate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189473.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977755.1
GO:0008670 - 2,4-dienoyl-CoA reductase (NADPH) activity [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0033543 - fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway [Evidence IEA]
NADPH-dependent 2,4-dienoyl-CoA reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014189475.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189476.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189477.1
COORDINATES: similar to AA sequence:RefSeq:WP_007601609.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189479.1
COORDINATES: similar to AA sequence:RefSeq:WP_006391382.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240819.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977760.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189481.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189482.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977970.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012977969.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189485.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189486.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189487.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_014892318.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009764478.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189490.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189491.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189492.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0019250 - aerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977959.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189495.1
COORDINATES: similar to AA sequence:RefSeq:WP_010431116.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014189497.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197555.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197554.1
COORDINATES: similar to AA sequence:RefSeq:WP_003508689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019365633.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977953.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012973959.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189710.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189709.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189707.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_014189706.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240775.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_014189704.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189703.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189701.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973970.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189698.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189697.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973973.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973974.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010658681.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0070906 - aspartate:alanine antiporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189694.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster carrier protein ApbC
COORDINATES: similar to AA sequence:RefSeq:WP_012973976.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189692.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973978.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189690.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189689.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189688.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189687.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189686.1
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006410352.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189682.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189681.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189680.1
histidine kinase dimerization/phosphoacceptor domain -containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189679.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189678.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189677.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198307.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189674.1
histidine phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189673.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189672.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189671.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189670.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977934.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012977933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977932.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943938.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977929.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189664.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189663.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189662.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189661.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189660.1
COORDINATES: protein motif:HMM:NF014763.2
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189659.1