Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Complete genome sequencing of Azospirillum sp. M2T2B2
Submitted (04-JUN-2018) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP029832.1.\nBacteria and source DNA available from KACC.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: FEB-2018\nAssembly Method :: RS HGAP Assembly v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 154.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 03:16:43\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,633\nCDSs (total) :: 5,517\nGenes (coding) :: 5,451\nCDSs (with protein) :: 5,451\nGenes (RNA) :: 116\nrRNAs :: 9, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 10, 10 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 22 of 66\nPseudo Genes (incomplete) :: 52 of 66\nPseudo Genes (internal stop) :: 5 of 66\nPseudo Genes (multiple problems) :: 12 of 66\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_076611849.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014189140.1
GO:0003824 - catalytic activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189139.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189138.1
COORDINATES: similar to AA sequence:RefSeq:WP_014328291.1
GO:0019290 - siderophore biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189136.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189135.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189133.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189132.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014189122.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189121.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007737202.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189119.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189118.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189112.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189111.1
GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:1904659 - glucose transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189110.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189109.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_014189108.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189104.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189103.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189102.1
PotD/PotF family extracellular solute-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977020.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197363.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977022.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977023.1
COORDINATES: similar to AA sequence:RefSeq:WP_018321808.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189097.1
COORDINATES: similar to AA sequence:RefSeq:WP_008972110.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010500734.1
GO:0008660 - 1-aminocyclopropane-1-carboxylate deaminase activity [Evidence IEA]
GO:0042217 - 1-aminocyclopropane-1-carboxylate catabolic process [Evidence IEA]
1-aminocyclopropane-1-carboxylate deaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014189093.1
hydroxypyruvate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189087.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189086.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189085.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189084.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189083.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
malate/lactate/ureidoglycolate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189078.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976976.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008386526.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020693807.1
COORDINATES: similar to AA sequence:RefSeq:WP_010668805.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: similar to AA sequence:RefSeq:WP_011767643.1
COORDINATES: similar to AA sequence:RefSeq:WP_013028515.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006497405.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018990105.1
COORDINATES: similar to AA sequence:RefSeq:WP_013028493.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252222.1
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_011313265.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013106510.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013899557.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011800780.1
COORDINATES: protein motif:HMM:NF039988.1
COORDINATES: similar to AA sequence:RefSeq:WP_015435398.1
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: similar to AA sequence:RefSeq:WP_018990117.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013106502.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189066.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189065.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_014242487.1
COORDINATES: similar to AA sequence:RefSeq:WP_015340871.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189062.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189061.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976999.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014189059.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189051.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189048.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189047.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006337059.1
Fe(3+)-hydroxamate ABC transporter permease FhuB
COORDINATES: similar to AA sequence:RefSeq:WP_014189045.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189044.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189043.1
COORDINATES: similar to AA sequence:RefSeq:WP_003529200.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189041.1
GO:0055072 - iron ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930487.1
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011238486.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189040.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189039.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189038.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014189037.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189035.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189034.1
COORDINATES: similar to AA sequence:RefSeq:WP_017338969.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189032.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189030.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189028.1
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189027.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189026.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011515666.1
GO:0016706 - 2-oxoglutarate-dependent dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189024.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189022.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189021.1
siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189020.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189019.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011550814.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189016.1
COORDINATES: similar to AA sequence:RefSeq:WP_017314431.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198414.1
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189010.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973595.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189007.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189006.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189004.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008438345.1
COORDINATES: similar to AA sequence:RefSeq:WP_017245409.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189001.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188994.1
COORDINATES: similar to AA sequence:RefSeq:WP_020102538.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199665.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198261.1
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008346739.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_012273181.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447325.1
COORDINATES: similar to AA sequence:RefSeq:WP_003251112.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188986.1
COORDINATES: similar to AA sequence:RefSeq:WP_003251117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188984.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012051873.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014188981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199242.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001379028.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188976.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188975.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188974.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
HWE histidine kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188973.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188971.1
GO:0016531 - copper chaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188970.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188969.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976002.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188967.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188966.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188965.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188964.1
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014188963.1
quinoprotein relay system zinc metallohydrolase 1
COORDINATES: similar to AA sequence:RefSeq:WP_014188962.1
quinoprotein dehydrogenase-associated SoxYZ-like carrier
COORDINATES: similar to AA sequence:RefSeq:WP_014188961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188960.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188959.1
YVTN family beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188958.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188955.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: similar to AA sequence:RefSeq:WP_014188954.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188951.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188950.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188949.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188948.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188947.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188946.1
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188945.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014188944.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188943.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188942.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188940.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188939.1
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014188935.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188934.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188932.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197946.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188930.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_014188929.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188928.1
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188926.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975738.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_014188924.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975736.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
hybrid sensor histidine kinase/response regulator
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188922.1
osmoprotectant NAGGN system M42 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_014188921.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012568675.1
N-acetylglutaminylglutamine amidotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014188919.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188918.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188917.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188916.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188915.1
COORDINATES: similar to AA sequence:RefSeq:WP_008961715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188913.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_014188912.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014188909.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975747.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975728.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188906.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975727.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188902.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188901.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188900.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012975721.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_014188898.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188897.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188896.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188895.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014188894.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188893.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188892.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188891.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188890.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188889.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_014188888.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977247.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188886.1
monovalent cation/H+ antiporter subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_014188885.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188884.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_014188883.1
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0016301 - kinase activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188882.1
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188881.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188880.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188879.1
COORDINATES: similar to AA sequence:RefSeq:WP_018098576.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188868.1
COORDINATES: similar to AA sequence:RefSeq:WP_008633111.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976234.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188865.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188864.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188863.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188862.1
glutathione ABC transporter permease GsiC
COORDINATES: similar to AA sequence:RefSeq:WP_014188861.1
glutathione ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188860.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976241.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188858.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012972723.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019400371.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197103.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197104.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188855.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188854.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188853.1
COORDINATES: similar to AA sequence:RefSeq:WP_009028645.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188851.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188850.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188849.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188848.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188847.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188846.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976244.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188840.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241806.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188835.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188834.1
COORDINATES: similar to AA sequence:RefSeq:WP_004260405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347242.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012427977.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188830.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977335.1
COORDINATES: similar to AA sequence:RefSeq:WP_007609454.1
GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006612899.1
GO:0030429 - kynureninase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188824.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188823.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188817.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188816.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188815.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188814.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014188812.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188811.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188809.1
two-component system response regulator BtsR
COORDINATES: similar to AA sequence:RefSeq:WP_014188808.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014426929.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188806.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013804273.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188804.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188803.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188802.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188801.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188800.1
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
GO:0008218 - bioluminescence [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188799.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF017076.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF025684.2
COORDINATES: protein motif:HMM:NF012894.2
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009542992.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250779.1
COORDINATES: similar to AA sequence:RefSeq:WP_016354911.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189144.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189145.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189146.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189147.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_014199770.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199768.1
COORDINATES: similar to AA sequence:RefSeq:WP_019247894.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199766.1
COORDINATES: similar to AA sequence:RefSeq:WP_007767257.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199764.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602334.1
COORDINATES: similar to AA sequence:RefSeq:WP_015316460.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198400.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976803.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976802.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014189157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189159.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189169.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242107.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189181.1
COORDINATES: protein motif:HMM:NF012743.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS5-like element ISAzba7 family transposase
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011970336.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198922.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198921.1
COORDINATES: similar to AA sequence:RefSeq:WP_006222484.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006156573.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010930497.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976843.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189185.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189186.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189187.1
COORDINATES: similar to AA sequence:RefSeq:WP_006392169.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189189.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189190.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189191.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189192.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189193.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189195.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199022.1
COORDINATES: similar to AA sequence:RefSeq:WP_014605721.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189213.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977124.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189214.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189215.1
COORDINATES: similar to AA sequence:RefSeq:WP_009763763.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189217.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189218.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189219.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252274.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019013754.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012976540.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189223.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015614 - ABC-type D-xylose transporter activity [Evidence IEA]; GO:0033222 - xylose binding [Evidence IEA]
GO:0015753 - D-xylose transmembrane transport [Evidence IEA]
D-xylose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189224.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189225.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976545.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189227.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189230.1
GO:0042597 - periplasmic space [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976549.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189235.1
COORDINATES: similar to AA sequence:RefSeq:WP_008833766.1
COORDINATES: similar to AA sequence:RefSeq:WP_012061271.1
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: protein motif:HMM:NF016838.2
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
DmsC/YnfH family molybdoenzyme membrane anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013098282.1
DMSO/selenate family reductase complex B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012907497.1
DMSO/selenate family reductase complex A subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014199622.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199620.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199619.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_014199615.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199614.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199613.1
COORDINATES: protein motif:HMM:NF005089.0
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199612.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199611.1
COORDINATES: similar to AA sequence:RefSeq:WP_008617019.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000065514.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272579.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247912.1
COORDINATES: similar to AA sequence:RefSeq:WP_013165986.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase, NapE protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189257.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189258.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189259.1
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014189260.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014189261.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189262.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189263.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014765098.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189266.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189267.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_014189972.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
IS256-like element ISAli6 family transposase
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018273699.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973655.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199526.1
DDE-type integrase/transposase/recombinase
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012455954.1
COORDINATES: similar to AA sequence:RefSeq:WP_007669744.1
COORDINATES: similar to AA sequence:RefSeq:WP_018231775.1
COORDINATES: similar to AA sequence:RefSeq:WP_012455949.1
COORDINATES: protein motif:HMM:NF014289.2
GO:0018822 - nitrile hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012253286.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611663.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249967.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012417708.1
COORDINATES: protein motif:HMM:NF017088.2
GO:0042314 - bacteriochlorophyll binding [Evidence IEA]
GO:0019684 - photosynthesis, light reaction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006022878.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343877.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017486921.1
COORDINATES: similar to AA sequence:RefSeq:WP_020088037.1
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011644635.1
COORDINATES: protein motif:HMM:TIGR00684.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
nitrate reductase molybdenum cofactor assembly chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_011803899.1
respiratory nitrate reductase subunit gamma
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: similar to AA sequence:RefSeq:WP_013704621.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012973404.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973405.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973406.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973407.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012973408.1
COORDINATES: protein motif:HMM:NF028178.2
COORDINATES: protein motif:HMM:NF025181.2
COORDINATES: similar to AA sequence:RefSeq:WP_010913673.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611132.1
COORDINATES: similar to AA sequence:RefSeq:WP_019403783.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014995660.1
COORDINATES: similar to AA sequence:RefSeq:WP_018900979.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945828.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_018270423.1
COORDINATES: similar to AA sequence:RefSeq:WP_008956829.1
COORDINATES: similar to AA sequence:RefSeq:WP_009816048.1
COORDINATES: similar to AA sequence:RefSeq:WP_003459778.1
COORDINATES: similar to AA sequence:RefSeq:WP_018900984.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005850054.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008945468.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200176.1
COORDINATES: similar to AA sequence:RefSeq:WP_014132906.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014200186.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200185.1
COORDINATES: similar to AA sequence:RefSeq:WP_007876704.1
COORDINATES: similar to AA sequence:RefSeq:WP_013233344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493407.1
COORDINATES: similar to AA sequence:RefSeq:WP_003081511.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200180.1
COORDINATES: similar to AA sequence:RefSeq:WP_003081504.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200178.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248685.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248798.1
COORDINATES: similar to AA sequence:RefSeq:WP_004855916.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611219.1
COORDINATES: similar to AA sequence:RefSeq:WP_015276111.1
COORDINATES: similar to AA sequence:RefSeq:WP_019403102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013722246.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945267.1
GO:0008718 - D-amino-acid dehydrogenase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0055130 - D-alanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018390583.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549807.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_017777812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011658418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012649223.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974371.1
indolepyruvate ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003510098.1
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: similar to AA sequence:RefSeq:WP_012226942.1
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF017658.2
COORDINATES: similar to AA sequence:RefSeq:WP_014199591.1
GO:0019213 - deacetylase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
amidohydrolase/deacetylase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_017156069.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199597.1
COORDINATES: similar to AA sequence:RefSeq:WP_008140616.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199599.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199600.1
COORDINATES: similar to AA sequence:RefSeq:WP_018263879.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199602.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199603.1
COORDINATES: similar to AA sequence:RefSeq:WP_018389521.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011440979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199606.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199607.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199608.1
COORDINATES: similar to AA sequence:RefSeq:WP_006642351.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF012548.2
COORDINATES: similar to AA sequence:RefSeq:WP_020185340.1
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188530.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188796.1
COORDINATES: protein motif:HMM:NF021554.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189142.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197413.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975506.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975507.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975508.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975509.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976760.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018590.2
COORDINATES: similar to AA sequence:RefSeq:WP_010872619.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.