Candidatus Rickettsiella viridis strain Ap-RA04 chromosome.
type: Entry
definition: Candidatus Rickettsiella viridis strain Ap-RA04 chromosome.
sequence version: NZ_AP018005.1
sequence date: 2022-12-27
sequence: sequence
division: CON
label: NZ_AP018005.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00069275
keyword: RefSeq
source: Candidatus Rickettsiella viridis
organism: Candidatus Rickettsiella viridis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales; Coxiellaceae; Rickettsiella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP018005.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet assembler v. 1.2.07\nGenome Coverage :: 3000X\nSequencing Technology :: HiSeq 2000\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/27/2022 00:59:29\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,448\nCDSs (total) :: 1,394\nGenes (coding) :: 1,382\nCDSs (with protein) :: 1,382\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 4\nPseudo Genes (total) :: 12\nCDSs (without protein) :: 12\nPseudo Genes (ambiguous residues) :: 0 of 12\nPseudo Genes (frameshifted) :: 3 of 12\nPseudo Genes (incomplete) :: 4 of 12\nPseudo Genes (internal stop) :: 5 of 12\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1579735
topology: linear
so has quality: SO_0000987
location: 1..1579735
location: region:1-1579735:1
RO_0002162: 676208

NZ_AP018005
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00069275
type: BioSample
SIO_000068: biosample

1
title: The genome sequence of Candidatus Rickettsiella viridis
author: Nikoh, N.
author: Tsuchida, T.
author: Yamaguchi, K.
author: Maeda, T.
author: Shigenobu, S.
author: Fukatsu, T.
journal: Unpublished

2
title: Direct Submission
author: Nikoh, N.
author: Tsuchida, T.
author: Yamaguchi, K.
author: Maeda, T.
author: Shigenobu, S.
author: Fukatsu, T.
journal: Submitted (23-MAR-2017) Contact:Naruo Nikoh The Open University of Japan; 2-11 Wakaba, Mihama, Chiba, Chiba 261-8586, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579735:1
position: 1579735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1579735:1:source
so part of: sequence
organism: Candidatus Rickettsiella viridis
mol type: genomic DNA
strain: Ap-RA04
isolation source: haemolymph
host: Acyrthosiphon pisum
country: France: Rennes
collection date: 2008

676208
type: Taxonomy
SIO_000068: taxonomy

DMP02_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dnaA
locus tag: DMP02_RS00005
old locus tag: RVIR1_00010
so part of: sequence
location: 74..1423
location: region:74-1423:1
so has part: feature:74-1423:1:exon
subclass of: SO_0000010

position:74:1
position: 74
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423:1
position: 1423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74-1423:1:exon

DMP02_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dnaA
locus tag: DMP02_RS00005
old locus tag: RVIR1_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035164.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MVSVLATATFVWQKCLDRLQNHISLQDFNTWIRPLQAEHKEDQLVLWAPNQFVLHCVNERFLVHIKQILTQLDDVPPEVILKVGSRANQGAPTLRHTQEVKAPVKSTRLSATHINTNFTFVNFVEGKSNQLARAASVQVAENPGGAYNPLLLYGGVGLGKTHLMHAIGNSILHKNPNAKVLYLHSERFVADMIKALQTNTINDFKTYYRSLDALLIDDIQFFAGKDRSQEEFFHTFNTLLESQQQIVLTCDRYPKEMSGVEERLKSRLGWGLTVAIEPPDLETRVAILISKAEQTKVSLPQEVAFFIGKRIHSNVRELEGVLKRVIAYAQFTGCQITLELVREAIKDVLALQDKLVTVDNIIKTVAEYYKIKVSDLISKRRTSSLARARQIAMALAKELTNHSLPELGRAFGGRDHTTVLHAFRKIQELKKTNTGVAEDFINLLRTLSN
SIO_010081: DMP02_RS00005
subclass of: SO_0000673
so part of: DMP02_RS00005
location: 74..1423
location: region:74-1423:1
so has part: feature:74-1423:1:exon

WP_126322078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74-1423:1:exon

DMP02_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dnaN
locus tag: DMP02_RS00010
old locus tag: RVIR1_00020
so part of: sequence
location: 1433..2581
location: region:1433-2581:1
so has part: feature:1433-2581:1:exon
subclass of: SO_0000010

position:1433:1
position: 1433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581:1
position: 2581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433-2581:1:exon

DMP02_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dnaN
locus tag: DMP02_RS00010
old locus tag: RVIR1_00020
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035780.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MQFTINRKALLKPLQLVTAVIERRQTVPILANVFLNLKDKALSLLGTDMEVELSGRIVLEEAGKEGKTTAPARKLVDICKSLPEESLLKFQQKGDKLILQCGRSRFNLATLPATDFPISEESFSINNKQLTFTLSQKRLRSLIEATNFAMAQQDVRYYLNGMLWELGQGSLRAVATDGHRLATSIKNLISHVMADSQQDDRSLSDNQFIIPRKAVYELSRLLSDDEENEVTILLNNNQLRVTMQDYTFTSKLIDGKFPGYDRVIPQSGDKTLTVDRDLLKSSLMRVGILSNDKHRSICLEMKAKELRIFANNLDQEDAEDVLEVDYSGEAITVAFNINYLIDVLNSLPTGLVRMTLTSTEASVRLESVEESTSIYVIMPMRL
SIO_010081: DMP02_RS00010
subclass of: SO_0000673
so part of: DMP02_RS00010
location: 1433..2581
location: region:1433-2581:1
so has part: feature:1433-2581:1:exon

WP_126322079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433-2581:1:exon

DMP02_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: recF
locus tag: DMP02_RS00015
old locus tag: RVIR1_00030
so part of: sequence
location: 2588..3673
location: region:2588-3673:1
so has part: feature:2588-3673:1:exon
subclass of: SO_0000010

position:2588:1
position: 2588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673:1
position: 3673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2588-3673:1:exon

DMP02_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: recF
locus tag: DMP02_RS00015
old locus tag: RVIR1_00030
inference: COORDINATES: protein motif:HMM:NF000819.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MQVSRLKINQFRNLIDLDLEFSPRFNFIYGPNGSGKSSLLEAIHFLSLGRSFRSALASRAIHYEASQFNLFSVVLGEAFTTTLGLKKTRQGKTKIKIGNNTESIGELAKLLPTQFVNPNSYHLLSGGPKARRQFIDWGVFHVEPHFFSVWQQFQQTLKQRNATLQRQMLADQIKVWNCKLIELSVEITRMREKYLQQLTPLITELISELVDLKELKIDFYQGWDKQFNLEDVLNRSFFRDSSQGYTQYGPQRADLLIKLRGNPVHEVLSRGEQKLLAYALQLAQGLLLKKITNKSCIYLFDDLFAELDAVKQGYLLALLNRLESQVFVTVIEGNLIKVLNNSVNRKTFQVENGEILEECLE
SIO_010081: DMP02_RS00015
subclass of: SO_0000673
so part of: DMP02_RS00015
location: 2588..3673
location: region:2588-3673:1
so has part: feature:2588-3673:1:exon

WP_126322080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2588-3673:1:exon

DMP02_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00020
old locus tag: RVIR1_00040
so part of: sequence
location: 3683..4000
location: region:3683-4000:1
so has part: feature:3683-4000:1:exon
subclass of: SO_0000010

position:3683:1
position: 3683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4000:1
position: 4000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3683-4000:1:exon

DMP02_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00020
old locus tag: RVIR1_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux SMR transporter
translation: MNAWFVLIIAGLFEVGFTTCMKLSEGFTQISYTVGFIIFSCLSLFFLNKALVQIPLGTAYAVWTGIGAFGTALIGMLFFKDPISYLRVFFLMLLIGSILGLKFVR
SIO_010081: DMP02_RS00020
subclass of: SO_0000673
so part of: DMP02_RS00020
location: 3683..4000
location: region:3683-4000:1
so has part: feature:3683-4000:1:exon

WP_126322081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3683-4000:1:exon

DMP02_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00025
old locus tag: RVIR1_00050
so part of: sequence
location: complement(4040..4318)
location: region:4040-4318:-1
so has part: feature:4040-4318:-1:exon
subclass of: SO_0000010

position:4040:-1
position: 4040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4318:-1
position: 4318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4040-4318:-1:exon

DMP02_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00025
old locus tag: RVIR1_00050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFLFLLIAPFLLTACGPPLVFGIPQQQWDQLNQQQRSQVIAGYNKQKVAEAQMAPLTQAVNALSYRNYRYYNYPYYYPYHRNYGFYDFPF
SIO_010081: DMP02_RS00025
subclass of: SO_0000673
so part of: DMP02_RS00025
location: complement(4040..4318)
location: region:4040-4318:-1
so has part: feature:4040-4318:-1:exon

WP_126322082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4040-4318:-1:exon

DMP02_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00030
old locus tag: RVIR1_00060
so part of: sequence
location: complement(4366..5106)
location: region:4366-5106:-1
so has part: feature:4366-5106:-1:exon
subclass of: SO_0000010

position:4366:-1
position: 4366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5106:-1
position: 5106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4366-5106:-1:exon

DMP02_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00030
old locus tag: RVIR1_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MLSIINISAYRFVRLSHDLLAELQIKLKKETQQLGLKGTILLSEEGINLFLAGQREAITEFQEQLNRVPALKNLTFKESLSDFQPFKKMFVKLKKEIIPFGIDAIRPEIRTATSIAPETLKSWFKERPNLVLLDTRNSFEVEFGSFENSLHLELKHFRDFPTAVQKLPDTVKKAPVVTFCTGGIRCEKASAFLLEAGFDEVYQLEGGILNYFEKCGGDHYDGLCFVFDDRKTLTPSLEVFDSTKNP
SIO_010081: DMP02_RS00030
subclass of: SO_0000673
so part of: DMP02_RS00030
location: complement(4366..5106)
location: region:4366-5106:-1
so has part: feature:4366-5106:-1:exon

WP_126322083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4366-5106:-1:exon

DMP02_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00035
old locus tag: RVIR1_00070
so part of: sequence
location: 5312..6685
location: region:5312-6685:1
so has part: feature:5312-6685:1:exon
subclass of: SO_0000010

position:5312:1
position: 5312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6685:1
position: 6685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5312-6685:1:exon

DMP02_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00035
old locus tag: RVIR1_00070
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035396.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase
translation: MAAKNLEEIVSLCKRKGFIFQSGEIYGGLQGVYDYGPLGVELKNNLKAAWWKSNVYERDDVYGLDAAILTQKKIFFYSGHENTFADLMVDCRKCKKRWRLDHLVEGKCENCGSKDLTDPRSFNMMFKTNIGPVADKDSYAYLRPETAQGIFTNFKNVMDSMAPKLPFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEFFVKPGEDEKWQEYWVEQRLEWWKAQGLSPECLKLFKQPQEELAHYAKATSDILYQFPHGFEELEGIANRTDYDLGSHTQGQSDLKISANVAANKDSVAKLSVQDPPGQYFLPYVIEPSAGLDRGVLAVLTDAYTEEKLAGNKERIVLKIKPHLSPVKVAIIPLKRNESAIVEKAQAIKKSIQSLGLGRIAYEDTGNIGKSYRRHDEIGTPLCMTVDFDTVGKSDNTANHDTVTVRDRDSMQQTRVNISSLIDYIKEHF
SIO_010081: DMP02_RS00035
subclass of: SO_0000673
so part of: DMP02_RS00035
location: 5312..6685
location: region:5312-6685:1
so has part: feature:5312-6685:1:exon

WP_126322084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5312-6685:1:exon

DMP02_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00040
old locus tag: RVIR1_00080
so part of: sequence
location: complement(6707..7402)
location: region:6707-7402:-1
so has part: feature:6707-7402:-1:exon
subclass of: SO_0000010

position:6707:-1
position: 6707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7402:-1
position: 7402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6707-7402:-1:exon

DMP02_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00040
old locus tag: RVIR1_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010653164.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YggS family pyridoxal phosphate-dependent enzyme
translation: MPNLIHKHLLQVKTQIIEAEHRFQRLNHSVKLIAVSKSQPIQAIKEAIDAGQFVFGENYAQEAVEKIKQLQGNDLEWHFLGGIQSNKTKLIAENFHWVHSLCAVKTAARLNKYRAVNLQPLNVCIQINLDQEPNKAGIYLEDLTAFAQSLEKLPYLKLRGLMTIPKKRTKFSAQRNSFKKLRLAFIKLQQLGFKIDTLSMGMSDDFVAAIAEESTCVRIGTAIFGRRPSSR
SIO_010081: DMP02_RS00040
subclass of: SO_0000673
so part of: DMP02_RS00040
location: complement(6707..7402)
location: region:6707-7402:-1
so has part: feature:6707-7402:-1:exon

WP_126322085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6707-7402:-1:exon

DMP02_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: acnB
locus tag: DMP02_RS00045
old locus tag: RVIR1_00090
so part of: sequence
location: 7485..10067
location: region:7485-10067:1
so has part: feature:7485-10067:1:exon
subclass of: SO_0000010

position:7485:1
position: 7485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10067:1
position: 10067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7485-10067:1:exon

DMP02_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: acnB
locus tag: DMP02_RS00045
old locus tag: RVIR1_00090
EC number: 4.2.1.3
EC number: 4.2.1.99
inference: COORDINATES: protein motif:HMM:NF006690.0
GO function: GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
translation: MSSTTQFLKAYEQHVQLRVREGIAPLPLSAEQVVELVELLKNPPQDAQGSFLVELLSQRIAPGVDPAAYVKAAFLAALAKGETKSPFIDPIQAVELLGTMLGGYNVPILIELLDHPSLADTAAKQLSHTLLMFDACYDVIEKANAGNLFAKQVIEAWATAAWFTSKVEVSHKITVSVFKVPGEINTDDLSLATEAWSRPDIPLHSLEMLRNRMPEALETINDLKSKGYPVAFVGDVVGTGSSRKSAINSVLWHMGEPIPFVPNKHRGGIILGGKIAPIFRTTAEDSGAFPIEVDVSQLNTGDVIQIYPYEGRITDEQGLEIAQFEVNPSLLDAVRAGGRIPLIIGRSLTDKVCEAMGLPFSNAFYRPKIAQESAKGFTLAQKMVGKACGLVGIRPGTYCEPKISAVGSQDTTGPMTRDELKELACLGFSADLVMQSFCHTAAYPKPVDIETQHSLPDFFSSRGGIVLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPGGSGVVAFAAAMGVMPLTMPESVLVRFTGQIQPGITLRDLVNAIPYVALQRGLLTLASKNKENIFSGRILEIEGLPDLKVEQAFEFADASAERSANGCTVRLNKEPVIEYLNSNISLLKWMIANGYQDTRSLQRRIDAMQNWLLNPMLLEPDTDAEYAEVIDIDLNQITEPLLACPNDPDNIKPLSEVAKTKVDEVFIGSCMTNIGHYRAAGSLLKNVGGHLPSILWIAPPTKMDAHQLMQEGYYAVYGSVGARTEMPGCSLCMGNQARVQDGATVVSTSTRNFPNRMGKGANVYLASAELSAITATLGYLPSAEEYKEKIQFINTMADDLYRYLNFDQMADYQTVSKEVGVLADK
SIO_010081: DMP02_RS00045
subclass of: SO_0000673
so part of: DMP02_RS00045
location: 7485..10067
location: region:7485-10067:1
so has part: feature:7485-10067:1:exon

WP_126322086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7485-10067:1:exon

DMP02_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00050
old locus tag: RVIR1_00100
pseudo: true
so part of: sequence
location: 10114..10479
location: region:10114-10479:1
so has part: feature:10114-10479:1:exon
subclass of: SO_0000010

position:10114:1
position: 10114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10479:1
position: 10479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10114-10479:1:exon

DMP02_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00050
old locus tag: RVIR1_00100
inference: COORDINATES: protein motif:HMM:NF014584.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CrcB family protein
SIO_010081: DMP02_RS00050
subclass of: SO_0000673
so part of: DMP02_RS00050
location: 10114..10479
location: region:10114-10479:1
so has part: feature:10114-10479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10114-10479:1:exon

DMP02_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00055
old locus tag: RVIR1_00110
so part of: sequence
location: 10476..10781
location: region:10476-10781:1
so has part: feature:10476-10781:1:exon
subclass of: SO_0000010

position:10476:1
position: 10476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10781:1
position: 10781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10476-10781:1:exon

DMP02_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00055
old locus tag: RVIR1_00110
inference: COORDINATES: protein motif:HMM:NF014677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF190 domain-containing protein
translation: MKTMDIVVVRIYITEGSHLLNKIVDYLKLEAHIPGMSVFRAINGFGETENSTASLVDLSLSLPLIIEFFTADKGKVEKIVEDLSKFVKPGHIIFWDAKTTG
SIO_010081: DMP02_RS00055
subclass of: SO_0000673
so part of: DMP02_RS00055
location: 10476..10781
location: region:10476-10781:1
so has part: feature:10476-10781:1:exon

WP_172593939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10476-10781:1:exon

DMP02_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00060
old locus tag: RVIR1_00120
so part of: sequence
location: complement(10797..11516)
location: region:10797-11516:-1
so has part: feature:10797-11516:-1:exon
subclass of: SO_0000010

position:10797:-1
position: 10797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11516:-1
position: 11516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10797-11516:-1:exon

DMP02_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00060
old locus tag: RVIR1_00120
inference: COORDINATES: protein motif:HMM:NF012334.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MKSILILGASSSISKACAEIFAARGYLLFLAGRNLLELECLSKDLQIRFKTQVYYSYFDITAFVSHPDFFKKVLETIGSLYGVLMAVGSLDKKYPHTEIIAANFSGAVSILDICADYLASQKKGFIIGLSSVAGDRGRQSNYVYGASKAALTTYLQGLRNSLTSHQVHVLTVKLGLIDTKMTFGGSYPIFLAANPEKTGLKIIKALDKGKESVYIPKIWRIIMLIIRLIPEKIFKYIKI
SIO_010081: DMP02_RS00060
subclass of: SO_0000673
so part of: DMP02_RS00060
location: complement(10797..11516)
location: region:10797-11516:-1
so has part: feature:10797-11516:-1:exon

WP_197720780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10797-11516:-1:exon

DMP02_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00065
old locus tag: RVIR1_00130
so part of: sequence
location: complement(11638..12510)
location: region:11638-12510:-1
so has part: feature:11638-12510:-1:exon
subclass of: SO_0000010

position:11638:-1
position: 11638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12510:-1
position: 12510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11638-12510:-1:exon

DMP02_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00065
old locus tag: RVIR1_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MRITLKQLEVFVAIAKSGNVSHAAKKMFLSQSACSMALATLEEQLEGSIFDRHGKQLFLNERGRSLLPKATTIISQIKELKDMMTENKKDNLSGQLVIGASKTIGNYLLPQLISEFTVEHQNIQIKLEIANTEVILSKLLSFHIDVALIEANCYSEKVNTYPWRKDELVIVASPKNPLSKKKKLTLSDIVNARWLLREASSQTRRKLEEAIGGKIRPFLELDDTEALKQATQAGLGISCLSRVVVGEHLKNNKLIELRTPFLNLSREFHILIHKEKYQSIIISEFLKKCA
SIO_010081: DMP02_RS00065
subclass of: SO_0000673
so part of: DMP02_RS00065
location: complement(11638..12510)
location: region:11638-12510:-1
so has part: feature:11638-12510:-1:exon

WP_126322089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11638-12510:-1:exon

DMP02_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00070
old locus tag: RVIR1_00140
so part of: sequence
location: 12798..13295
location: region:12798-13295:1
so has part: feature:12798-13295:1:exon
subclass of: SO_0000010

position:12798:1
position: 12798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13295:1
position: 13295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12798-13295:1:exon

DMP02_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00070
old locus tag: RVIR1_00140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFKIIIKLMFLLVLLGGSLALNAETLPKNESFVSPGNFSSPRYFYTKCRDSSSLIRNSEEINTASPEIVGGLFACATYTEASLDWFLFSLRGVIGEDALGCYYNTTLKNLSSDELLSSVISFLNLNQVSLDMPGAYTPQIFFKTMLTKYPMPNECRKKVTTKKN
SIO_010081: DMP02_RS00070
subclass of: SO_0000673
so part of: DMP02_RS00070
location: 12798..13295
location: region:12798-13295:1
so has part: feature:12798-13295:1:exon

WP_126322090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12798-13295:1:exon

DMP02_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00075
old locus tag: RVIR1_00150
so part of: sequence
location: complement(13429..13504)
location: region:13429-13504:-1
so has part: feature:13429-13504:-1:exon
subclass of: SO_0000663

position:13429:-1
position: 13429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13504:-1
position: 13504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13429-13504:-1:exon

DMP02_RS00075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS00075
old locus tag: RVIR1_00150
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(13469..13471),aa:Thr,seq:tgt)
SIO_010081: DMP02_RS00075
subclass of: SO_0000673
so part of: DMP02_RS00075
location: complement(13429..13504)
location: region:13429-13504:-1
so has part: feature:13429-13504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13429-13504:-1:exon

DMP02_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00080
old locus tag: RVIR1_00160
so part of: sequence
location: complement(13547..14536)
location: region:13547-14536:-1
so has part: feature:13547-14536:-1:exon
subclass of: SO_0000010

position:13547:-1
position: 13547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14536:-1
position: 14536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13547-14536:-1:exon

DMP02_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00080
old locus tag: RVIR1_00160
EC number: 6.3.4.15
inference: COORDINATES: protein motif:HMM:TIGR00121.1
GO function: GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin--[acetyl-CoA-carboxylase] ligase
translation: MSLLKSTLNLFSDGKFHSEKEISHFLGLPRCIIPDTLQQLLEPSIHFEKIEDKGYRIPGGLELLNEKLIFNELGHANSLLKHLEILNEINSTNTYLLEKKATSKTMAVFAEQQTAGRGQFNRSWLSPGFGKNIALSILYQLPNKPDQLKGLSLVIGIAIVHALQEYGLKEIKLKWPNDIVHHTKKLAGVLIEIKNSSKPGFSSIVIGIGLNLYNPTTSPEAIKQTITDIHSIQKLAPQRNRLAGLLLKNCLITLSEFQIKGFSAFIESWHQLDSLKDKPIRIETAKELQEGIARGVNSQGQLCIDIDGEVHCFSSGEVRILHNYCPENC
SIO_010081: DMP02_RS00080
subclass of: SO_0000673
so part of: DMP02_RS00080
location: complement(13547..14536)
location: region:13547-14536:-1
so has part: feature:13547-14536:-1:exon

WP_126322091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13547-14536:-1:exon

DMP02_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00085
old locus tag: RVIR1_00170
pseudo: true
so part of: sequence
location: complement(14556..>15371)
location: region:14556-15371:-1
so has part: feature:14556-15371:-1:exon
subclass of: SO_0000010

position:14556:-1
position: 14556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15371:-1
position: 15371
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14556-15371:-1:exon

DMP02_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00085
old locus tag: RVIR1_00170
inference: COORDINATES: protein motif:HMM:NF022457.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Kdo hydroxylase family protein
SIO_010081: DMP02_RS00085
subclass of: SO_0000673
so part of: DMP02_RS00085
location: complement(14556..>15371)
location: region:14556-15371:-1
so has part: feature:14556-15371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14556-15371:-1:exon

DMP02_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00090
old locus tag: RVIR1_00180
so part of: sequence
location: complement(15655..17163)
location: region:15655-17163:-1
so has part: feature:15655-17163:-1:exon
subclass of: SO_0000010

position:15655:-1
position: 15655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17163:-1
position: 17163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15655-17163:-1:exon

DMP02_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00090
old locus tag: RVIR1_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011945756.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MSLAIVQTRASTGIKAPAVNVETHISNGLPSLSIVGLAEKEVKESRERVRSAILNSRFEFPIRRITINLAPADLPKQGGRFDLAIALGILAASKQIPNDSLGSYEFIGELGLSGELRPVSAILPFALEAYKANHKIILPADNALEASLSQHTMILPAKNILQICSHLHAKEFLSPYKREFETANTSAIQADLADVFGQLHAKRALEIAASGKHSLLLIGPPGTGKTMLATRLMSLLPPLSDEEALEIATVRSISEKGFKLRDWKSAAFRSPHHTASSIALVGGGSPPRPGEISLAHQGVLFLDELPEFNKQVLESLREPLESGTITISRAARQAEFPANFQLIAAMNPCPCGYLGSITNRCECSTTQIQRYHRKLSGPFLDRIDMQVRVDLIDKNHFLKKLPSETSATVRARVQKARKKQYYDRGILNNNLSGKALEKACKLSKKDQAILEKAFAEFQLSARAYHRILRIARTIADLTGCEQIQNPHLMEALSYRRSLFHSK
SIO_010081: DMP02_RS00090
subclass of: SO_0000673
so part of: DMP02_RS00090
location: complement(15655..17163)
location: region:15655-17163:-1
so has part: feature:15655-17163:-1:exon

WP_126322093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15655-17163:-1:exon

DMP02_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00095
old locus tag: RVIR1_00190
so part of: sequence
location: complement(17239..17511)
location: region:17239-17511:-1
so has part: feature:17239-17511:-1:exon
subclass of: SO_0000010

position:17239:-1
position: 17239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17511:-1
position: 17511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17239-17511:-1:exon

DMP02_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00095
old locus tag: RVIR1_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: accessory factor UbiK family protein
translation: MLDMNFINDIAKQFSDKLPPGAKKFKHDLDKNFRAVVQSMLAKLDLVTREEFNVQKNVLAKTRAKINALAKQLEQLEEHTPKAKLNKKNK
SIO_010081: DMP02_RS00095
subclass of: SO_0000673
so part of: DMP02_RS00095
location: complement(17239..17511)
location: region:17239-17511:-1
so has part: feature:17239-17511:-1:exon

WP_126322094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17239-17511:-1:exon

DMP02_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00100
old locus tag: RVIR1_00200
so part of: sequence
location: complement(17535..19112)
location: region:17535-19112:-1
so has part: feature:17535-19112:-1:exon
subclass of: SO_0000010

position:17535:-1
position: 17535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19112:-1
position: 19112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17535-19112:-1:exon

DMP02_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00100
old locus tag: RVIR1_00200
inference: COORDINATES: protein motif:HMM:NF020022.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aminoglycoside phosphotransferase/ATP-binding protein
translation: MPTNVLIKNLLSNSLYEHPVSQTRLIETHVSWVILTGKYAYKIKKTVDFGFLDFSTLEKRKHFCEEELRLGQQFASEIYLNVVPITGTLDHPQINGTGPILEYAIKMLEFPQENLLSTLLKQGGLTENIIDQLSKLIAEFHQKTPIAAKESRFGQPEEVHAPSKQNFEQIAPLLTNPTDINQLKRLEIWSEQQFKQLQPSLQSRKDHGFIRDCHGDLHLANIIFYKNKPILFDRLEFNEDLRWTDVIADLAFLMMDLTEKKQPGFANQLLNTYLHYTGDYEGLALLPYYLTYRAVVRAKIALFRLKQEKLGDEEKKEIQNDYYNFINLAESYTQPVKPSLIITHGFAGSGKTTVAKECVTHCGAIQINSDIIRKNLFDIPLHGHSNSGLNSGIYTAEATKETYKKLSDLTEIIIKAGFTTLVDATFLQHSQRTCFYSLAKKMQIPFYILHCQVNNTEIEQRIKRRLNNPNSDSEADLTILIEQKKNNEPLTSLEKEHTLLIKDKQILSKNILDKICPRVHFDALS
SIO_010081: DMP02_RS00100
subclass of: SO_0000673
so part of: DMP02_RS00100
location: complement(17535..19112)
location: region:17535-19112:-1
so has part: feature:17535-19112:-1:exon

WP_126322095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17535-19112:-1:exon

DMP02_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: cfa
locus tag: DMP02_RS00105
old locus tag: RVIR1_00210
so part of: sequence
location: 19230..20372
location: region:19230-20372:1
so has part: feature:19230-20372:1:exon
subclass of: SO_0000010

position:19230:1
position: 19230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20372:1
position: 20372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19230-20372:1:exon

DMP02_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: cfa
locus tag: DMP02_RS00105
old locus tag: RVIR1_00210
EC number: 2.1.1.79
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015444610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclopropane fatty acyl phospholipid synthase
translation: MDLQRAKKCVQELLLEAGITINGKNPSDIQVYNEAFYSRILKDPILGLGETYVAKWWDCEQLDQFFYYLLRAGVEEGIKKNTCFLPYILKTKLLAIFMRSWNLQAKSRAFEVGIRHYDKGNVLYQTMLDKYLTYSCGYWKEAGNLDEAQQAKLALTCEKLQLRPGMQVLDIGCGWGSFCRYAAENYHVSVLGITVSKEQYQYAKDFCSGLSVEIRLVDYRSIQGSFDRVCSIGMFEHVGPKNYLNYMQLIHRCLKKEGLFLLHTIGSNTSQYFPNPWIHKYIFPNGVLPSIQQIGKASEGLFVMEDWHNFGAYYDQTLMAWYANFSENWDSLQKYYDASFYRLWKYYLLACAGAFRARDIQLWQVVFSKGGVIKGYDSIR
SIO_010081: DMP02_RS00105
subclass of: SO_0000673
so part of: DMP02_RS00105
location: 19230..20372
location: region:19230-20372:1
so has part: feature:19230-20372:1:exon

WP_126322096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19230-20372:1:exon

DMP02_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00110
old locus tag: RVIR1_00220
so part of: sequence
location: 20554..21093
location: region:20554-21093:1
so has part: feature:20554-21093:1:exon
subclass of: SO_0000010

position:20554:1
position: 20554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21093:1
position: 21093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20554-21093:1:exon

DMP02_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00110
old locus tag: RVIR1_00220
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035228.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA pyrophosphohydrolase
translation: MIDSEGFRIGVGIIVANDCGQVLWARRIGQHAWQFPQGGMQCDETPEQALFRELYEELGLEDSDVKLLGGTKNWLYYWLPPHLRRSHVQPLCIGQKQKWFLLCLTGDPEKIRFDVTRSPEFDRWRWAPYWYPIRQVITFKRHVYRRALEELSSLLPVGSVQLKRMNKLVDSSTLVEKVE
SIO_010081: DMP02_RS00110
subclass of: SO_0000673
so part of: DMP02_RS00110
location: 20554..21093
location: region:20554-21093:1
so has part: feature:20554-21093:1:exon

WP_126322097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20554-21093:1:exon

DMP02_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ptsP
locus tag: DMP02_RS00115
old locus tag: RVIR1_00230
so part of: sequence
location: 21272..23545
location: region:21272-23545:1
so has part: feature:21272-23545:1:exon
subclass of: SO_0000010

position:21272:1
position: 21272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23545:1
position: 23545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21272-23545:1:exon

DMP02_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ptsP
locus tag: DMP02_RS00115
old locus tag: RVIR1_00230
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003633499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate--protein phosphotransferase
translation: MLKVLRRIVQEVSSAQRFEQALQILVSRVREALHTQSCTVFLLDDKKIYVLLATDGLNPSSVGKVRLTFDQGLVGLIGRTRELINIDNAPEHSDFFYVQGLGEERYKAFLGVPIVHNRALLGVLVVQQEEQRCFDETEEAFLVTMAAQLGGVLAHAEATGEISFKENKEQVQADIIFQGIASAPGISVGQAVVAYPFADLEAVPHKKVKNISAEVSQLKKAFKSARNDIQRLKKHMLSVLPEEEQALFDVYLMILDKASLEKEVIKVIQETQQWAQAALQIVIASHVLQFERVDDDYLRERAADLRDLGRRILMHLQHGQLTPILYPEKTILVGEEVSPSALAEVPEGRLVGIVSVKGSSHSHLSILARSLGIPAITGVENLPVNQLEAQTLIVDGAQGKLIVAPSAPVKQSFIALIEQQREFSDSLEPLRDLPAETLDGYSISLWVNTGLMADANLSLTAGAEGIGLYRTEMPFLIRDCFPAEDEQYGLYRQLLTAFSPRPVVMRTLDIGGDKALPYFPIKEDNPFLGWRGIRVTLDHPEIFLIQIRAMLRANRGLNNLRIMLPMISCVAEADHALRLINQAYEKELSEDPNACKPPIGIMIEVPSAIYQAHALAERVEFLSVGSNDLTQYMLAVDRNNPRVANLYDPFQPSVLQALVQVVEAAHQAQKPVSICGEMASDPLAIPLLLAMGFDALSMNSFSIPRIKSVIRHISFRQAKVLLAQVLKMDNAKTIRDYLGQALASLSLKTLASVEVEA
SIO_010081: DMP02_RS00115
subclass of: SO_0000673
so part of: DMP02_RS00115
location: 21272..23545
location: region:21272-23545:1
so has part: feature:21272-23545:1:exon

WP_126322098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21272-23545:1:exon

DMP02_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00120
old locus tag: RVIR1_00240
so part of: sequence
location: 23556..24902
location: region:23556-24902:1
so has part: feature:23556-24902:1:exon
subclass of: SO_0000010

position:23556:1
position: 23556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24902:1
position: 24902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23556-24902:1:exon

DMP02_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00120
old locus tag: RVIR1_00240
inference: COORDINATES: protein motif:HMM:NF013714.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MNHYNKYQTSFNHYPHQRPQRLSRPESYSELETCTSGGIARGLGGSYGDAALNKDGHVILTERLDRFLEFDEQQGVLCVEAGVSLRKILDLIVPRGWFLPVTPGTSYVTLGGCVAADVHGKNHQRVGSIGQHVVSFTLITAQGEQVQCSPEIHSELFWATIGGMGLTGIIGTVTLKLKPIESAYLLVQHKQTNNLQETFDALSQESSSDEYEVAWLDGLNLPLGRSIIMRARHANLAELPSQQQHAPFIAPPRKTYKLPFYLPNGLLHPTLIKAFNKYYYQQLAKKESPILMSYSDYFYPLDKIVHWPRLYGKRGFLQYQCVIPTESAYTVTKQILETLHAEKHPVYLAVLKRFGKENAAPLSFAMPGFTLALDLPILNQGLFDCLDKLDAMVIEAGGRVYLAKDARLNPEAFRKMYPRYSEWLAVKQQWDPENKLSSGLSRRLEITA
SIO_010081: DMP02_RS00120
subclass of: SO_0000673
so part of: DMP02_RS00120
location: 23556..24902
location: region:23556-24902:1
so has part: feature:23556-24902:1:exon

WP_126322099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23556-24902:1:exon

DMP02_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00125
old locus tag: RVIR1_00250
so part of: sequence
location: complement(24977..25342)
location: region:24977-25342:-1
so has part: feature:24977-25342:-1:exon
subclass of: SO_0000010

position:24977:-1
position: 24977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25342:-1
position: 25342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24977-25342:-1:exon

DMP02_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00125
old locus tag: RVIR1_00250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKYETIKIQLHNKKRCFNTQKNVLKKMKALLNETKIIVNESKNKLDSIVLQEKELAQNDPTHKLQTVVQQRIQYKNQLKQDQSMLNRHQFFILDTKCNIAKIENEITQLKNSLKELRHNL
SIO_010081: DMP02_RS00125
subclass of: SO_0000673
so part of: DMP02_RS00125
location: complement(24977..25342)
location: region:24977-25342:-1
so has part: feature:24977-25342:-1:exon

WP_126322100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24977-25342:-1:exon

DMP02_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00130
old locus tag: RVIR1_00260
so part of: sequence
location: complement(25401..27476)
location: region:25401-27476:-1
so has part: feature:25401-27476:-1:exon
subclass of: SO_0000010

position:25401:-1
position: 25401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27476:-1
position: 27476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25401-27476:-1:exon

DMP02_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00130
old locus tag: RVIR1_00260
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M3 family metallopeptidase
translation: MIHEDGELSGNTAENSNAQNITDTLPQFSRLNPETIVADLKKILKKNREDLPCLLTEITPLDWSLMEQLADLNDCLQRFWSPISHLHAVKQTPELREAYNECLPLLSAYSTELGQNKALYQTIKTLANSNYHFDYAQEKCLHNELRDFHLSGVDLPEKEQKRYRDIQAQLSQLSNQFEENLLDATANWSKLITDKAELQGLPDYVIASAEKAAKDKDLDGYLFTLDYPSYFPVLTHADNRALRETLYKAYITRASEFNDAQYDNGPVLLDILKLRHELSQLLGFANYAQKSLASNKMAKNPEEVIHFLEELLATTRAKAKAERKTLCEFAYVCDKIDTLEPWDSLYYREKLREKNFGISEDALRCYFPVEKVLTGLFGLIHRLFGMHVQEIKNVDVWDPSVRFFAITDAQQQLRGQFYLDIYARPEKREGAWMDDYQSRRRLSDGKIQTPIAFLTCNFSPPIDSTQTALLTHEEVLTLFHEFGHGLQHMLTLIDYEGVSGINGVAWDAVELPSQFLEYFAWEKPVLDLISSHYKTSEPLSDNLIQQMRAARNFQAGLQLLRQLELALFDFRLHAEFEPEKGYPQIQILLDGIRQQIDAFPVIPFNRFQHGFSHIFAGGYAAGYYSYLWAEVLSCDAFYKFLEDGIFNQATGQAFLETILEQGGAIDAVELFKKFRGRAPKIQPFLESLDIK
SIO_010081: DMP02_RS00130
subclass of: SO_0000673
so part of: DMP02_RS00130
location: complement(25401..27476)
location: region:25401-27476:-1
so has part: feature:25401-27476:-1:exon

WP_172593940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25401-27476:-1:exon

DMP02_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00135
old locus tag: RVIR1_00270
so part of: sequence
location: complement(27559..28038)
location: region:27559-28038:-1
so has part: feature:27559-28038:-1:exon
subclass of: SO_0000010

position:27559:-1
position: 27559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28038:-1
position: 28038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27559-28038:-1:exon

DMP02_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00135
old locus tag: RVIR1_00270
inference: COORDINATES: protein motif:HMM:NF014668.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: regulatory protein RecX
translation: MIHEDGELSGNTAKNSSAKSIALNYLSRREYTQLTLQKKLLQKGISAEIIKTVLQQLIQEGLLNDIRFCEAFIANRIRQGYGPVRIIAELRQQGVNEDTIIAQLQQNESVWLDCIAKMLEKKFSSSPENLKEKHRQIHYLQYRGFRLDQIKKCIATNKI
SIO_010081: DMP02_RS00135
subclass of: SO_0000673
so part of: DMP02_RS00135
location: complement(27559..28038)
location: region:27559-28038:-1
so has part: feature:27559-28038:-1:exon

WP_126322101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27559-28038:-1:exon

DMP02_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: recA
locus tag: DMP02_RS00140
old locus tag: RVIR1_00280
so part of: sequence
location: complement(28163..29203)
location: region:28163-29203:-1
so has part: feature:28163-29203:-1:exon
subclass of: SO_0000010

position:28163:-1
position: 28163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29203:-1
position: 29203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28163-29203:-1:exon

DMP02_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: recA
locus tag: DMP02_RS00140
old locus tag: RVIR1_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003632198.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecA
translation: MTEARKKALSIALSQIKKQHGEGAVMRLGDSTQVPVEAISTGSLGLDIALGIGGLPRGRIIEIYGPESSGKTTLTLQTIAECQKKGGIAAFVDAEHALDPIYAGKLGVDLEDLLVSQPDTGEQALEIVDMLVRSNAVDIIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLAGNIKRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKKGDEIIGNETRVKVVKNKVAPPFRQVEFEILYNQGICRLGEIIDLGTSNGLIDKAGAWYSFQGDRIGQGKENVKQFLKDRPEVYKSLETQLRERLINKPVPTIPETAEVEAEIAD
SIO_010081: DMP02_RS00140
subclass of: SO_0000673
so part of: DMP02_RS00140
location: complement(28163..29203)
location: region:28163-29203:-1
so has part: feature:28163-29203:-1:exon

WP_126322102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28163-29203:-1:exon

DMP02_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hldE
locus tag: DMP02_RS00145
old locus tag: RVIR1_00290
so part of: sequence
location: 29296..30732
location: region:29296-30732:1
so has part: feature:29296-30732:1:exon
subclass of: SO_0000010

position:29296:1
position: 29296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30732:1
position: 30732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29296-30732:1:exon

DMP02_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hldE
locus tag: DMP02_RS00145
old locus tag: RVIR1_00290
EC number: 2.7.1.167
EC number: 2.7.7.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034982.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
translation: MKIQVPSFNSIRALVVGDVMLDRYWSGTTSRISPEAPVPIVHVQSIEERPGGAGNVALNMAALGAQVDLISFCGEDQAGDSLEKKLSDAGVDCYLCRMPELPTASKLRVLSLHQQLIRIDFEEPNYQLDYARLKKLFEQRLVHADVVILSDYAKGCLAHVQDLIQCARVANKPVFVDPKRNDFEPYRGATAITPNRLEFEAVVGSCKGEEALLQKGLKLLKSHDFQALLVTRGEEGMTLIRKEQPEIYLPAFAKQVYDVTGAGDTVIACFALSYAATQKDLVQAAQLANIAASIVVGKLGAATVSPAELRRATQMQQFSFHRGVLSEAELKVIVEDAKAHGEQIVMTGGCFDILHAGHVAYLEQAKRLGDRLIVAVNDDASVSHLKGSGRPVNNLEKRMAVLAGLSAVDWVVPFSEATPERLIKSILPDILAKGGDYQLKDLPEAKIVKAYGGQVKLIDMVEGCSTSRIISAIKEGGA
SIO_010081: DMP02_RS00145
subclass of: SO_0000673
so part of: DMP02_RS00145
location: 29296..30732
location: region:29296-30732:1
so has part: feature:29296-30732:1:exon

WP_126322103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29296-30732:1:exon

DMP02_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rfaD
locus tag: DMP02_RS00150
old locus tag: RVIR1_00300
so part of: sequence
location: 30729..31682
location: region:30729-31682:1
so has part: feature:30729-31682:1:exon
subclass of: SO_0000010

position:30729:1
position: 30729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31682:1
position: 31682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30729-31682:1:exon

DMP02_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rfaD
locus tag: DMP02_RS00150
old locus tag: RVIR1_00300
EC number: 5.1.3.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035749.1
GO function: GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-glyceromanno-heptose 6-epimerase
translation: MIIVTGGAGFIGSNLVKQLNVNYPGMPIVIVDDLTQGIKFKNINDCMVADYLDQQNFLEKIKQNKYFPKLKAIFHQGACSTTTEWNGKYMMENNFEYSKVLLHYCLSWKIPFIYASSASVYGMGHIFKEELQYEKPINVYAYSKYLFDQYVRNILPEAKSQIAGLRYFNVYGPRENHKGNMASVVLHADQQLRETGIINLFQGNEGYDDGEQQRDFIYVDDAVDINLWFLKSKKSGIYNAGTGHSESFNALAQAVIDFHGRGEIRYIPFPVSLQGCYQSFTQADLSKLKAIGYAGSFKSLAEGVKAYLSTIHKSITI
SIO_010081: DMP02_RS00150
subclass of: SO_0000673
so part of: DMP02_RS00150
location: 30729..31682
location: region:30729-31682:1
so has part: feature:30729-31682:1:exon

WP_126322104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30729-31682:1:exon

DMP02_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00155
old locus tag: RVIR1_00310
so part of: sequence
location: 31754..32095
location: region:31754-32095:1
so has part: feature:31754-32095:1:exon
subclass of: SO_0000010

position:31754:1
position: 31754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32095:1
position: 32095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31754-32095:1:exon

DMP02_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00155
old locus tag: RVIR1_00310
inference: COORDINATES: protein motif:HMM:TIGR00426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComEA family DNA-binding protein
translation: MGIYPSLLTTLLVSVLGTPALASQSIDTHVHSLAQQSTASLLARNHKEVTASVNINTADTKTLLELKGVGLKRAQTIISDRERNGPFKSVDDLMRVKGIGKKTVDQNHNKITV
SIO_010081: DMP02_RS00155
subclass of: SO_0000673
so part of: DMP02_RS00155
location: 31754..32095
location: region:31754-32095:1
so has part: feature:31754-32095:1:exon

WP_126322105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31754-32095:1:exon

DMP02_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00160
old locus tag: RVIR1_00320
so part of: sequence
location: complement(32155..33198)
location: region:32155-33198:-1
so has part: feature:32155-33198:-1:exon
subclass of: SO_0000010

position:32155:-1
position: 32155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33198:-1
position: 33198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32155-33198:-1:exon

DMP02_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00160
old locus tag: RVIR1_00320
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035869.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I fructose-bisphosphate aldolase
translation: MAVHELEGIILQLAASGKGILAADESQTTIGKRFASLHVESTVENRRSYRELLFTTPGIEAFINGVILHEETLGQRNREGVLFPDLLDEQGILPGIKVDKGLIPLNTKEKITQGLDGLAERLVIYKNLGACFAKWRAVFTISNTLPSSLAIVANAQALARYAYICQDNGFVPIVEPELLIDGNHSLARCAEASEATLHAVFEELHKHQILLKCMILKPSMVIAGNQHMPPSSINEVAHATLKVLQHTVPTDVPSINFLSGGQTPEQATAHLNAMNKLKTAKQPWLLSFSYGRALQEPALKTWNGKAHNVKAAQRAFYKRAKLNAAACKGLYQTTMEAEDKEAELAFV
SIO_010081: DMP02_RS00160
subclass of: SO_0000673
so part of: DMP02_RS00160
location: complement(32155..33198)
location: region:32155-33198:-1
so has part: feature:32155-33198:-1:exon

WP_126322106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32155-33198:-1:exon

DMP02_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00165
old locus tag: RVIR1_00330
so part of: sequence
location: 33507..35402
location: region:33507-35402:1
so has part: feature:33507-35402:1:exon
subclass of: SO_0000010

position:33507:1
position: 33507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35402:1
position: 35402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33507-35402:1:exon

DMP02_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00165
old locus tag: RVIR1_00330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLKTFLKQLLGKMGKDSHAKNLVEKLSVMGLKKYMLFEGNFNKDIKRLYSLGRFPFQPSSWEDLSDEKLDEELWGRLHNLRCFLEAWEDSGLSRDDKKKRHAFKYKKDLAKPIRKKIHEALNIEVINLVEKVLSKAVLAEELKEDTKNSENIVVLNKQLTDIKTDIKRANAKVSGNQLIELTSKCLDTLKTINPDLKVPEGKDIEQRFKKAANAITSFKTLQQKILASLSVSVAIIAALACGFFTGGAIYALIGSALLPGVVIPIVVIVGLIGFAVNARFFSKSLPEFLLKLFNPSRITEFINEEGDLKQFSNLKKYVYLPLAALFSVAVGISFAAFSLVQLSTMLVALPFLAATGPLPIILAVVLAITMTIVMFKAFVEIAPNLSASRLWQSLRTAWKEMSFLKFLSHGITLAVCGIGVFGLFMACHMGVPTLGTIFGGPASIFVFVTSFVGQLPFNVLTVSTFCKVMGNFFLGIPANVKSLFRKEPTQLSEAAKKSPLLNKIASAGRDIITGGAMLINGVANGATLLSGTPLTSKYIAAGAAGALNSISGNLVSSDSDTQERSQADEIAIQKLKGSLESQESESEASKADNALRACLAAELPFFGGCHLPVEQQSISSEQQLSVKMAA
SIO_010081: DMP02_RS00165
subclass of: SO_0000673
so part of: DMP02_RS00165
location: 33507..35402
location: region:33507-35402:1
so has part: feature:33507-35402:1:exon

WP_126322107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33507-35402:1:exon

DMP02_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00170
old locus tag: RVIR1_00340
so part of: sequence
location: 35580..35969
location: region:35580-35969:1
so has part: feature:35580-35969:1:exon
subclass of: SO_0000010

position:35580:1
position: 35580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35969:1
position: 35969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35580-35969:1:exon

DMP02_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00170
old locus tag: RVIR1_00340
inference: COORDINATES: protein motif:HMM:NF015834.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase subunit I
translation: MVISKIQCPLSLMRQIGVAGLITGSIAFFVAGILHRWQFGSSFVLGVFIWAVPSCYFANKLFRNVAKVSSVSLLRIFYKAEIIKLLLSGFFFVMIIKLLSVNIAALVTGYFASQLVFWVRLMMKNKEGI
SIO_010081: DMP02_RS00170
subclass of: SO_0000673
so part of: DMP02_RS00170
location: 35580..35969
location: region:35580-35969:1
so has part: feature:35580-35969:1:exon

WP_126322108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35580-35969:1:exon

DMP02_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: atpB
locus tag: DMP02_RS00175
old locus tag: RVIR1_00350
so part of: sequence
location: 35966..36766
location: region:35966-36766:1
so has part: feature:35966-36766:1:exon
subclass of: SO_0000010

position:35966:1
position: 35966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36766:1
position: 36766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35966-36766:1:exon

DMP02_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: atpB
locus tag: DMP02_RS00175
old locus tag: RVIR1_00350
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010948672.1
GO component: GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit A
translation: MSTQSSADYVQHHLEHLTFNLKTFSFHGQGFWNLNLDTFFLSLVLGIGFLFLFRWVAVSAQAGIPGKIQNFVEILIEFVDKTVKESFQGTSQLIAPLALTIFVWVFLMNFMDLIPVDFLPTTLSLFGITHFRSVPTADPNATFGMSIAVFCLIIYYNLKIKGFKGLGKEMLITPFGPYLFPINIIFRLLEEFVRPISLSLRLFGNLFAGELIFILVALLPWWIQWTFGGVWSIFHILIIVIQAFIFMMLTIVYLSMAHESHAEEAH
SIO_010081: DMP02_RS00175
subclass of: SO_0000673
so part of: DMP02_RS00175
location: 35966..36766
location: region:35966-36766:1
so has part: feature:35966-36766:1:exon

WP_126322109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35966-36766:1:exon

DMP02_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: atpE
locus tag: DMP02_RS00180
old locus tag: RVIR1_00360
so part of: sequence
location: 36801..37103
location: region:36801-37103:1
so has part: feature:36801-37103:1:exon
subclass of: SO_0000010

position:36801:1
position: 36801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37103:1
position: 37103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36801-37103:1:exon

DMP02_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: atpE
locus tag: DMP02_RS00180
old locus tag: RVIR1_00360
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598830.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit C
translation: MEVAQVVANVQGLTAIAAALLVGLAALGTAIGFGILGGKFLEGVARQPELTPMLMLRMFLMAGLVDAFAAISIVMGLYLIFAKNPFLAEVMKLVAKPVAG
SIO_010081: DMP02_RS00180
subclass of: SO_0000673
so part of: DMP02_RS00180
location: 36801..37103
location: region:36801-37103:1
so has part: feature:36801-37103:1:exon

WP_126323455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36801-37103:1:exon

DMP02_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00185
old locus tag: RVIR1_00370
so part of: sequence
location: 37131..37604
location: region:37131-37604:1
so has part: feature:37131-37604:1:exon
subclass of: SO_0000010

position:37131:1
position: 37131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37604:1
position: 37604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37131-37604:1:exon

DMP02_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00185
old locus tag: RVIR1_00370
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035692.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit B
translation: MEINITLVGQLITFAVFVWFTMKFVWPPLLKAMKEREQHIAEGLAAAERGQHALELAQQKVDEQMQQAKQQAAEIIEQASRRANQMAEESKQQIRKENERLLSIAQADIQQEWQTAQEKLRAEAASLATTMVEKILKQALDKREVQQALVKQSLEEI
SIO_010081: DMP02_RS00185
subclass of: SO_0000673
so part of: DMP02_RS00185
location: 37131..37604
location: region:37131-37604:1
so has part: feature:37131-37604:1:exon

WP_126322110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37131-37604:1:exon

DMP02_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00190
old locus tag: RVIR1_00380
so part of: sequence
location: 37683..38267
location: region:37683-38267:1
so has part: feature:37683-38267:1:exon
subclass of: SO_0000010

position:37683:1
position: 37683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38267:1
position: 38267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37683-38267:1:exon

DMP02_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00190
old locus tag: RVIR1_00380
EC number: 7.1.2.2
inference: COORDINATES: protein motif:HMM:NF004402.0
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit delta
translation: MIHEEGELSGNAAENSSAKSISIARPYAKAAFDYAVEEKGLESWSALLSQATLIVKDKAMQVLLKDPRFDKMAAYECLLAACKGWMFSSGENFLKLIALHQRLLVLPEIEQLFGHYIAERANQMTVQAVSAIHLTETEGLALTAVLEKRLQREVKLDYVVDDSLLGGLVVRVGDLVIDSSVRSKLERLRARLVN
SIO_010081: DMP02_RS00190
subclass of: SO_0000673
so part of: DMP02_RS00190
location: 37683..38267
location: region:37683-38267:1
so has part: feature:37683-38267:1:exon

WP_126322111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37683-38267:1:exon

DMP02_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: atpA
locus tag: DMP02_RS00195
old locus tag: RVIR1_00390
so part of: sequence
location: 38284..39828
location: region:38284-39828:1
so has part: feature:38284-39828:1:exon
subclass of: SO_0000010

position:38284:1
position: 38284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39828:1
position: 39828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38284-39828:1:exon

DMP02_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: atpA
locus tag: DMP02_RS00195
old locus tag: RVIR1_00390
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004723422.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit alpha
translation: MQQLTTSEISELIKARIQKFDVSAETRTEGSIVSISDGIVRIYGLNDVMLGEMIEFPDQCYGLALNLERDSVGAVVLGDYEALSEGQTVKCTGRILEVPVGEALLGRVVNALGQAIDGRGPIQTEMSAPIEQIAPGVIWRQSVSQPLQTGILAIDSMVPVGRGQRELIIGDRQTGKTALAIDAIINQKGTGVKCIYVAIGQKASSIAAVVRKLEEHDALKHTIIVSASAADSAAMQFIAPYAGCAMGEYFRDQGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERASRVNAEFVEKATNGRVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGLSVSRVGSAAQTKIIKKLGGGVRLSLAQYRELATFSQFMSDLDEATRKQLERGQRVTEILKQKQYSPFSVGEMAVLLFAADQGYLDDVELTKIVSFSEGLLAYMRAEKADCLAEINKKGDYNQNIIDALQQAITSFKTTQTW
SIO_010081: DMP02_RS00195
subclass of: SO_0000673
so part of: DMP02_RS00195
location: 38284..39828
location: region:38284-39828:1
so has part: feature:38284-39828:1:exon

WP_126322112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38284-39828:1:exon

DMP02_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: atpG
locus tag: DMP02_RS00200
old locus tag: RVIR1_00400
so part of: sequence
location: 39835..40695
location: region:39835-40695:1
so has part: feature:39835-40695:1:exon
subclass of: SO_0000010

position:39835:1
position: 39835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40695:1
position: 40695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39835-40695:1:exon

DMP02_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: atpG
locus tag: DMP02_RS00200
old locus tag: RVIR1_00400
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002555983.1
GO component: GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit gamma
translation: MSFAQEIRGKISSIKGTQKITCAMEMVAASKMRKAQERMTLSRPYAHKMLDVISHIASSHAEYQHPYLQVREVKRAGFLIITTDKGLCGGLNSNLLKMALQQFQACKEKGIAIDLAVIGGKGEAFFKRVGGNIVAHADHLGDAPQLQDLIGVIKVLLDAYKQGELDSLTIIYNEFINTMTQKPKALSLLPIVPPEKSKLNYHWDYLYEPDAKPLLELILTRYIESQVYQSVVENVACEQAARMVAMKSATDNAGELINDLQLAYNKARQASITKELAEIVAGSEAV
SIO_010081: DMP02_RS00200
subclass of: SO_0000673
so part of: DMP02_RS00200
location: 39835..40695
location: region:39835-40695:1
so has part: feature:39835-40695:1:exon

WP_126322113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39835-40695:1:exon

DMP02_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: atpD
locus tag: DMP02_RS00205
old locus tag: RVIR1_00410
so part of: sequence
location: 40758..42146
location: region:40758-42146:1
so has part: feature:40758-42146:1:exon
subclass of: SO_0000010

position:40758:1
position: 40758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42146:1
position: 42146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40758-42146:1:exon

DMP02_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: atpD
locus tag: DMP02_RS00205
old locus tag: RVIR1_00410
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035322.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit beta
translation: MKQTESTGNIVEIIGAVVDVQFSRGHVPNIYDALMVDNEGLILEVQQQLGDGIVRTIAMGTSDGLKRGLKVSNTGAPISVPVGKQTLGRIMDVLGQPIDEAGPINEELRLPIHRKAPSFSEQAANEQLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTVAENFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSNSRQLDLLIVGEEHYTVARAVQKTLQRYKELKDIIAILGMDELSEQDKLIVMRARKVQRFLSQPFFVAEIFTGSPGKYVSLKETIRGFKAILNGEYDDVPEQAFYMVGGIDEVATKAKAL
SIO_010081: DMP02_RS00205
subclass of: SO_0000673
so part of: DMP02_RS00205
location: 40758..42146
location: region:40758-42146:1
so has part: feature:40758-42146:1:exon

WP_126322114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40758-42146:1:exon

DMP02_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00210
old locus tag: RVIR1_00420
so part of: sequence
location: 42160..42591
location: region:42160-42591:1
so has part: feature:42160-42591:1:exon
subclass of: SO_0000010

position:42160:1
position: 42160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42591:1
position: 42591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42160-42591:1:exon

DMP02_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00210
old locus tag: RVIR1_00420
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598818.1
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit epsilon
translation: MMKSMQVDIVSAETEIFSGQVAHLVVSGLLGELGIYPGHTQLVTALKPGSVRLVKPDGEDEVLYISGGILEVQPTLITLLADTAVRAADLDEMAALEAKQRAEHALSDKQADIDYAKATIELAQAVAQLQAIAKLKQKATGKR
SIO_010081: DMP02_RS00210
subclass of: SO_0000673
so part of: DMP02_RS00210
location: 42160..42591
location: region:42160-42591:1
so has part: feature:42160-42591:1:exon

WP_126322115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42160-42591:1:exon

DMP02_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: glmU
locus tag: DMP02_RS00215
old locus tag: RVIR1_00430
so part of: sequence
location: 42670..44061
location: region:42670-44061:1
so has part: feature:42670-44061:1:exon
subclass of: SO_0000010

position:42670:1
position: 42670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44061:1
position: 44061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42670-44061:1:exon

DMP02_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: glmU
locus tag: DMP02_RS00215
old locus tag: RVIR1_00430
EC number: 2.3.1.157
EC number: 2.7.7.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034870.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
translation: MKSNKLSHPQKKFLDVIILAAGHGKRMHSNLPKVLHKLAGKPLLQYIVETVSQLNPHAIHVIYGNGGSQVPNYLADLAVTWVKQKEILGTGHAVAQAIPQIKNDENQVLILLGDTPLIHLSTLKKLIANTKPNEIGLITLTTPYPFGLGRILRNAKGEVAQIIEEKEATAVQKKIQEVNSGIFYVPVKLLKQWLPNLKKMNAQGEYYLTDIIEMAVNSKINVVTVSSDIEGETQGINDRVQLAKLERHYQKSQAEKLMLKGLTLHDPNRFDLRGKLTIGKDVVIDINVILEGENTIGANSYIGPNTTLKNVKIGAGVEIKGYCMIEDAIIEDNCIIGPFARIRPGTKLKNNVHIGNFVEIKNSQIQSETKINHLSYIGDAKIGKNVNVGAGTITCNYDGVKKYQTIIEDEVFIGSNAALIAPIRVGKKATIGAGSTLSKEVPAGKLTVSRAETRTISTWKRPK
SIO_010081: DMP02_RS00215
subclass of: SO_0000673
so part of: DMP02_RS00215
location: 42670..44061
location: region:42670-44061:1
so has part: feature:42670-44061:1:exon

WP_126322116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42670-44061:1:exon

DMP02_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00220
old locus tag: RVIR1_00440
so part of: sequence
location: complement(44096..44488)
location: region:44096-44488:-1
so has part: feature:44096-44488:-1:exon
subclass of: SO_0000010

position:44096:-1
position: 44096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44488:-1
position: 44488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44096-44488:-1:exon

DMP02_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00220
old locus tag: RVIR1_00440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFHRLREVSNNNQLLIQQFNQLSQHMLWALEENRNLRREIIGLTRDLSSILLDHINSQQRSLALQQEIAAKTSRITELESHITRLQEKITSLDNQLVRSISRTQIIIPNPTVTTNNANMHSSATNAPNNH
SIO_010081: DMP02_RS00220
subclass of: SO_0000673
so part of: DMP02_RS00220
location: complement(44096..44488)
location: region:44096-44488:-1
so has part: feature:44096-44488:-1:exon

WP_126322117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44096-44488:-1:exon

DMP02_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00225
old locus tag: RVIR1_00450
so part of: sequence
location: complement(44573..45340)
location: region:44573-45340:-1
so has part: feature:44573-45340:-1:exon
subclass of: SO_0000010

position:44573:-1
position: 44573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45340:-1
position: 45340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44573-45340:-1:exon

DMP02_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00225
old locus tag: RVIR1_00450
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MSNCTNNNLVIDKSHASPNVNQRIFSLVLHYTALDLKSSLKALTDPNTQVSAHYLIPEQSISGKRQIFQLVDEKERAWHAGASTWQKRINLNDSSIGIEIVNLGYSDKNGKRLWYPFTDYQIESVIELAKIIIARYQIHPSCIIGHSDIAPGRKVDPGPLFPWKTLYENGIGAWFEEEEELGYNHAHEIDISSLQKNLQAYGYAIEITGTLDKQTRTILQAFQMHFRARDYSGNPDTETFAILENLLKKYFPKIK
SIO_010081: DMP02_RS00225
subclass of: SO_0000673
so part of: DMP02_RS00225
location: complement(44573..45340)
location: region:44573-45340:-1
so has part: feature:44573-45340:-1:exon

WP_126322118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44573-45340:-1:exon

DMP02_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00230
old locus tag: RVIR1_00460
so part of: sequence
location: complement(45349..45804)
location: region:45349-45804:-1
so has part: feature:45349-45804:-1:exon
subclass of: SO_0000010

position:45349:-1
position: 45349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45804:-1
position: 45804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45349-45804:-1:exon

DMP02_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00230
old locus tag: RVIR1_00460
inference: COORDINATES: protein motif:HMM:NF021621.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: host attachment protein
translation: MIWIISLNSSLGHIYSYEPKEHQLTLLESLTNPSAHLKDSDLLTDKPGHYQTMHAAKGAYEAPSDPHEVALARFTRNLADLLKKGLDNHQYKKLILCAPPHVGGALLSNLDKQVEHTLLINIKKNFVESDPSQLIDYLKANWWDIVRSNKL
SIO_010081: DMP02_RS00230
subclass of: SO_0000673
so part of: DMP02_RS00230
location: complement(45349..45804)
location: region:45349-45804:-1
so has part: feature:45349-45804:-1:exon

WP_126322119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45349-45804:-1:exon

DMP02_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpiA
locus tag: DMP02_RS00235
old locus tag: RVIR1_00470
so part of: sequence
location: complement(45853..46518)
location: region:45853-46518:-1
so has part: feature:45853-46518:-1:exon
subclass of: SO_0000010

position:45853:-1
position: 45853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46518:-1
position: 46518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45853-46518:-1:exon

DMP02_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpiA
locus tag: DMP02_RS00235
old locus tag: RVIR1_00470
EC number: 5.3.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005770348.1
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-5-phosphate isomerase RpiA
translation: MMKNQEDLKKASAKAALDYIKMGQVIGLGSGSTVNHFITALASIKSKIEGVVAASVNTEKYLKQHGIPILNLNTAGELALYIDGADEVNPQLQLIKGGGGALTREKIIAAASKHFICIADESKYVGLLGQGALPIEVIPMGRSYVAREIVKLGGFPAYRDNFLTDNGNIILDTQNWDFTDPIRLERLLNNIPGVVCNGLFAQRPADTLLLATDSGVKTTER
SIO_010081: DMP02_RS00235
subclass of: SO_0000673
so part of: DMP02_RS00235
location: complement(45853..46518)
location: region:45853-46518:-1
so has part: feature:45853-46518:-1:exon

WP_197720781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45853-46518:-1:exon

DMP02_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00240
old locus tag: RVIR1_00480
so part of: sequence
location: complement(46635..46844)
location: region:46635-46844:-1
so has part: feature:46635-46844:-1:exon
subclass of: SO_0000010

position:46635:-1
position: 46635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46844:-1
position: 46844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46635-46844:-1:exon

DMP02_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00240
old locus tag: RVIR1_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWTISNQIRYQIIAQYRGSKLMINILGKGLYFMSNARHIFNNPLLLNGFSQEEAALIGYIVGTESGIDS
SIO_010081: DMP02_RS00240
subclass of: SO_0000673
so part of: DMP02_RS00240
location: complement(46635..46844)
location: region:46635-46844:-1
so has part: feature:46635-46844:-1:exon

WP_126322120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46635-46844:-1:exon

DMP02_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00245
old locus tag: RVIR1_00490
so part of: sequence
location: 47643..48320
location: region:47643-48320:1
so has part: feature:47643-48320:1:exon
subclass of: SO_0000010

position:47643:1
position: 47643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48320:1
position: 48320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47643-48320:1:exon

DMP02_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00245
old locus tag: RVIR1_00490
inference: COORDINATES: protein motif:HMM:NF024853.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiol:disulfide interchange protein DsbA/DsbL
translation: MLKLTIRSLALLILSTLLISCGKVSSGKPNSPTDFQAGRDYQVISNSQITPIIGPKEIIEVKEFFNYACPACYHFEPILEKWLAKKPAYVKFERIPIIFQPSWRSLARAYYIAQMLGVERQLTPALFKAIHVDRQDLSDPKLQEAFFIKEGVKQQEFESMASFSPGIDAQLLRSDTLMQEDKIVAAPTLVVDNRYKVDPSLVGGDPARFLQVVDYLIEKVRKGEE
SIO_010081: DMP02_RS00245
subclass of: SO_0000673
so part of: DMP02_RS00245
location: 47643..48320
location: region:47643-48320:1
so has part: feature:47643-48320:1:exon

WP_172593941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47643-48320:1:exon

DMP02_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00250
old locus tag: RVIR1_00500
so part of: sequence
location: 48321..49112
location: region:48321-49112:1
so has part: feature:48321-49112:1:exon
subclass of: SO_0000010

position:48321:1
position: 48321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49112:1
position: 49112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48321-49112:1:exon

DMP02_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00250
old locus tag: RVIR1_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035765.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MDNLVEVRRLSFERNGRTVFSDINLTIPRGKITAIMGPSGCGKTTLLRLIGGQLKPKAGTVQINDRVINNLSRTQLYELRRKIGILFQSGALFTNLNVFENIAFPLREHTQLPDFMIRDIVLMKLESVGLRGTAELMPSQLSGGMARRIALARAIALDPELIMYDEPFTGLDPIALGVIIKLICDLNRALSMTMILVSHDVQEVMRIADYIYLIASGKIIGRGTPEELSMNKNPELEQFLQGLPDGVVPFHYPAVDYIQDLFH
SIO_010081: DMP02_RS00250
subclass of: SO_0000673
so part of: DMP02_RS00250
location: 48321..49112
location: region:48321-49112:1
so has part: feature:48321-49112:1:exon

WP_126322122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48321-49112:1:exon

DMP02_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mlaE
locus tag: DMP02_RS00255
old locus tag: RVIR1_00510
so part of: sequence
location: 49122..49904
location: region:49122-49904:1
so has part: feature:49122-49904:1:exon
subclass of: SO_0000010

position:49122:1
position: 49122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49904:1
position: 49904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49122-49904:1:exon

DMP02_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mlaE
locus tag: DMP02_RS00255
old locus tag: RVIR1_00510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010946578.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance ABC transporter permease subunit MlaE
translation: MTNTLSELGRIGLGLLMGLGRSGLFFLHALYRRPHFRKNFPLLVEQLYFIGVLSLLIIILSGLFIGMVVGLQGYNTLDKFGASQQLGQLVALSVVRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLASMEMMGVDPLRRIIAPRFWAGFISMPLLAIIFSSIAIWGGYLVGVVWLGVDGGTFWGAMQASVDFYDDIVNGIIKSIVFGIVVTWIAVFQGYDTVPTAQGIGRATTRTVVYSSLAVLGLDFILTAVMMGGW
SIO_010081: DMP02_RS00255
subclass of: SO_0000673
so part of: DMP02_RS00255
location: 49122..49904
location: region:49122-49904:1
so has part: feature:49122-49904:1:exon

WP_269471428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49122-49904:1:exon

DMP02_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mlaD
locus tag: DMP02_RS00260
old locus tag: RVIR1_00520
so part of: sequence
location: 49905..50375
location: region:49905-50375:1
so has part: feature:49905-50375:1:exon
subclass of: SO_0000010

position:49905:1
position: 49905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50375:1
position: 50375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49905-50375:1:exon

DMP02_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mlaD
locus tag: DMP02_RS00260
old locus tag: RVIR1_00520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034756.1
GO process: GO:0015914 - phospholipid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipid asymmetry maintenance protein MlaD
translation: MRDRIIEVWVGLFMLCSIIAVLILALKVSGLSNALASNGYTITADFDNIGGLKVRSPVTLAGVRIGQVSSIKLDSTQFKAIVTMQLDAKQQQLPADTSASIQTQGLLGANYISLKPGFDQNFLKNGSVIQDTHPALILEDLIGQLVFSLKNSGGKQ
SIO_010081: DMP02_RS00260
subclass of: SO_0000673
so part of: DMP02_RS00260
location: 49905..50375
location: region:49905-50375:1
so has part: feature:49905-50375:1:exon

WP_126322124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49905-50375:1:exon

DMP02_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00265
old locus tag: RVIR1_00530
so part of: sequence
location: 50372..50974
location: region:50372-50974:1
so has part: feature:50372-50974:1:exon
subclass of: SO_0000010

position:50372:1
position: 50372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50974:1
position: 50974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50372-50974:1:exon

DMP02_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00265
old locus tag: RVIR1_00530
inference: COORDINATES: protein motif:HMM:NF017319.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKKFILFMIGLLVCTAVWAISSPLDLLQTTSNQLIATLQQNQATLKTKPQLVYGIVNQILLPHVDLVSMSERALGRNAWMQASPAQRQAFTQQFTTLLIRTYSSALAQYTDEKIKFDPLRSNFNAASRVQVNSKIIRDSGPAINVSYRLMRVGEQWKLYDFSVDGISLVESFRSQFVQELQQAGIDGLINKLAQHNAQNN
SIO_010081: DMP02_RS00265
subclass of: SO_0000673
so part of: DMP02_RS00265
location: 50372..50974
location: region:50372-50974:1
so has part: feature:50372-50974:1:exon

WP_126322125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50372-50974:1:exon

DMP02_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00270
old locus tag: RVIR1_00540
so part of: sequence
location: 50974..51282
location: region:50974-51282:1
so has part: feature:50974-51282:1:exon
subclass of: SO_0000010

position:51282:1
position: 51282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50974-51282:1:exon

DMP02_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00270
old locus tag: RVIR1_00540
inference: COORDINATES: protein motif:HMM:NF013868.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MNNSSNLFQKRDGAYCLSGELSFDTVPRIWQQSQEALKDKAQSVVFDLAEVTQSDSSGVALLIAWTRSFHRQSRTIHFLHLPKQMLAIIQLAGLKNIVPIKI
SIO_010081: DMP02_RS00270
subclass of: SO_0000673
so part of: DMP02_RS00270
location: 50974..51282
location: region:50974-51282:1
so has part: feature:50974-51282:1:exon

WP_126322126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50974-51282:1:exon

DMP02_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: murA
locus tag: DMP02_RS00275
old locus tag: RVIR1_00550
so part of: sequence
location: 51298..52572
location: region:51298-52572:1
so has part: feature:51298-52572:1:exon
subclass of: SO_0000010

position:51298:1
position: 51298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52572:1
position: 52572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51298-52572:1:exon

DMP02_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: murA
locus tag: DMP02_RS00275
old locus tag: RVIR1_00550
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019235091.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MDKLIIKGGTPLQGEVRISGAKNATLPILAACLLSKEPITLFNVPHLQDVTTMVELLSGMGAQFMIGERMSLEVNARDLIDSYAPYALVRKMRASILVLGALLARCGEAIVSLPGGCAIGTRPVNLHIQGLQAMGVKMSVENGYIKAKAKGRLQGAVIKLDTITVTGTENLMMAATLAKGKTVIKNAAREPEVVDLANFLNSIGANISDAGTDTITIEGVQQLTGGYYRILPDRIEAATYLIATACTRGFIRLKDIKAKHLEAVIYTLREAGTEITIGDHWIELDMRNKRAKAVNVITAPYPAFPTDVQAQIMALNITAEGTGTITETVFENRFMHAQEMRRMGADITLKGNTAVCKGVEKLTGAEVMATDLRASASLVLAGLTAEGETTVNRIYHIDRGYECIEEKLSQLGGKIKRISVSEAP
SIO_010081: DMP02_RS00275
subclass of: SO_0000673
so part of: DMP02_RS00275
location: 51298..52572
location: region:51298-52572:1
so has part: feature:51298-52572:1:exon

WP_172594005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51298-52572:1:exon

DMP02_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00280
old locus tag: RVIR1_00560
so part of: sequence
location: complement(52737..53471)
location: region:52737-53471:-1
so has part: feature:52737-53471:-1:exon
subclass of: SO_0000010

position:52737:-1
position: 52737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53471:-1
position: 53471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52737-53471:-1:exon

DMP02_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00280
old locus tag: RVIR1_00560
inference: COORDINATES: protein motif:HMM:TIGR04305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CADD family putative folate metabolism protein
translation: MTKQIPDNQFNTDSLDNSMQLLDRQLNETHLLRHPLYQAWSAGKLSINDLQNYACQYYHHVDAFPRYISATHSNCHLPQARQVLLENLNDEEGVSTGEPHPTLWLQFSKGLGLCEETVKNSVPTPETKQLIDDFLSLSRSSYAEGLGALYAYERQIPQTAASKIMGLKQFYNIDDQATLKFFRVHLEADVEHSEATKTLMQELPLVEKIKAEKAAKKIAQSVWNMLSGIQAQTIGNIHCEIPVT
SIO_010081: DMP02_RS00280
subclass of: SO_0000673
so part of: DMP02_RS00280
location: complement(52737..53471)
location: region:52737-53471:-1
so has part: feature:52737-53471:-1:exon

WP_197720782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52737-53471:-1:exon

DMP02_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00285
old locus tag: RVIR1_00570
so part of: sequence
location: 53758..54276
location: region:53758-54276:1
so has part: feature:53758-54276:1:exon
subclass of: SO_0000010

position:53758:1
position: 53758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54276:1
position: 54276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53758-54276:1:exon

DMP02_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00285
old locus tag: RVIR1_00570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLNSSLRFAGIVVAILLLTACGGGSGGPGGVGGAGTGTTGTGGGPTTAPPGSGGGGGFPNLGNIAGVTLTGDGGLVLNATALQTLGLQAGVLTPQELARLNVTLPNAGVGVRAITKQGQLIAITGPHGKTFAVPGGPSTLPGTGIRLPSLPSGGNVGGTLKNTLGNVLKH
SIO_010081: DMP02_RS00285
subclass of: SO_0000673
so part of: DMP02_RS00285
location: 53758..54276
location: region:53758-54276:1
so has part: feature:53758-54276:1:exon

WP_126322128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53758-54276:1:exon

DMP02_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00290
old locus tag: RVIR1_00580
so part of: sequence
location: complement(54345..56123)
location: region:54345-56123:-1
so has part: feature:54345-56123:-1:exon
subclass of: SO_0000010

position:54345:-1
position: 54345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56123:-1
position: 56123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54345-56123:-1:exon

DMP02_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00290
old locus tag: RVIR1_00580
inference: COORDINATES: protein motif:HMM:NF015803.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: POTRA domain-containing protein
translation: MNKQSIQGKGNYTKLTLYFLPFLLLIVPLKGFAAVVPSTIVPGQVERQLRNTVPINTEQPSRVVTQATPVAVASTTPIPPSMRTPFILRSVRIIGSSVYSQESLNAFYQPYLNKRISYSELEKIASDITLKYLRDGYILSRAHIPIQNLKSGHVTITIIEAYVTNVSIQGKIHGLENFLNTYSEKIKQSRPLQQKTLQHYTLLLNRLPGVKATLQINPISENSGAQNLIFNIQQKRFSPYAILNNNQSRYLGSQNLFVSANMYSLLQGGDATTVTAATAPFEPRVLQYYYLYEVIPIGVYGDHLDVAADYTQTKPNVLGPPTATGVVGTFDSLAGKVGEITGYYYHPFILQTDEKLEGRLALGYYNSKTTGFNEPVNGPQDVTVRVPTIRAQSVYERTRPKYLDRIEAEISQGFHSLGAAIGPPASNNPSIDYTKLYYYASHIQILPKSFSILIYSMGQYAFNPLIPVEKIPYGGIPFGRAYDPSEIIGDSGIMGGLEIRYNTFPESFSTVQYFTRYDIGKVWNKNVAPAFALNSVYSDASLSAGLRLFLTKDFNLELSVARPLTNPVQAEVLSGKNGKSLRFFFNFSYTPL
SIO_010081: DMP02_RS00290
subclass of: SO_0000673
so part of: DMP02_RS00290
location: complement(54345..56123)
location: region:54345-56123:-1
so has part: feature:54345-56123:-1:exon

WP_126322129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54345-56123:-1:exon

DMP02_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: eda
locus tag: DMP02_RS00295
old locus tag: RVIR1_00590
so part of: sequence
location: complement(56214..56849)
location: region:56214-56849:-1
so has part: feature:56214-56849:-1:exon
subclass of: SO_0000010

position:56214:-1
position: 56214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56849:-1
position: 56849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56214-56849:-1:exon

DMP02_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: eda
locus tag: DMP02_RS00295
old locus tag: RVIR1_00590
EC number: 4.1.2.14
EC number: 4.1.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035729.1
GO function: GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO process: GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MLTLIDILQQSRIIPVIVIDKIEHAIPLANTLVENGFKVLEITLRTDCALEAIKQIANSVPDAILGAGTIITPRQLSEAKAAGAQFAVSPGLSEQLVAETKKEKLAYLPGIATVSEALLAYELGLTALKFFPAEIMGGIKALSALSEVLPSLQFCPTGGINLDNFINYLKLPQVPCIGGTWIAPRALIEKENFTEIALHAKEAQRKLQTIL
SIO_010081: DMP02_RS00295
subclass of: SO_0000673
so part of: DMP02_RS00295
location: complement(56214..56849)
location: region:56214-56849:-1
so has part: feature:56214-56849:-1:exon

WP_126322130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56214-56849:-1:exon

DMP02_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00300
old locus tag: RVIR1_00610
so part of: sequence
location: 57091..58029
location: region:57091-58029:1
so has part: feature:57091-58029:1:exon
subclass of: SO_0000010

position:57091:1
position: 57091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58029:1
position: 58029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57091-58029:1:exon

DMP02_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00300
old locus tag: RVIR1_00610
inference: COORDINATES: protein motif:HMM:NF012515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar kinase
translation: MKQIAVIGEAMLELSHRSDTTLALSFAGDTLNFAIYLRRLLPAESFTIHYVTALGCDSYSDSMLKNWQEEGLNTDLVCRLPNKLPGLYLIRTDEEGERTFYFYRQNSAARELFKSCATLDLEKKLLSMDYLYLTGITLAILDEASREYLWAILEKAKQKGVKIIFDTNYRASLWPDAESARTVIDRTLKWVDVALPTFIDEQSLFGDVTPEACVQRLLKNKIIEIIVKCGAEPVLIATIATQKSVPACSIEKTVDTTGAGDSFNAAYVAARLLDIEPIKAAQWGHQLASMVIAYPGAIIPQEAMPDLRGYYA
SIO_010081: DMP02_RS00300
subclass of: SO_0000673
so part of: DMP02_RS00300
location: 57091..58029
location: region:57091-58029:1
so has part: feature:57091-58029:1:exon

WP_126322131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57091-58029:1:exon

DMP02_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00305
old locus tag: RVIR1_00620
so part of: sequence
location: 58022..59074
location: region:58022-59074:1
so has part: feature:58022-59074:1:exon
subclass of: SO_0000010

position:58022:1
position: 58022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59074:1
position: 59074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58022-59074:1:exon

DMP02_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00305
old locus tag: RVIR1_00620
EC number: 5.1.3.-
inference: COORDINATES: protein motif:HMM:NF008277.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldose epimerase family protein
translation: MPEMFCQPSTFGELPDGQTITQYTLRNPSGMSISVINYGATLISVKVPGLRGTVHELTLGFDHLEEYLNHDFYFGATIGRVTNRIANASFNYQGEEIHLTKNKDFAHHLHGGERGFDKAIWQPEVSIQSDKASVEFKIVSPDGDQGYPGTLEVKTTYSLTLANELKISFEAKTDRVTPVDLTNHAYWNLAGAGQGTVLDHVLQVFADHYVVTDKDLLPTGQIAEVNDTPFDFRQPHHLGERLEEIPIGGYDLCFVLPAMINHHPRLVSQIKEPMSGRTLEVQTTQPGLQFYTGNSLKSYPISGGLTTQRYGAFCMETQNFPGAVNYPQFPSPFLLPGERYYHETIYRLIW
SIO_010081: DMP02_RS00305
subclass of: SO_0000673
so part of: DMP02_RS00305
location: 58022..59074
location: region:58022-59074:1
so has part: feature:58022-59074:1:exon

WP_126322132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58022-59074:1:exon

DMP02_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00310
old locus tag: RVIR1_00630
so part of: sequence
location: 59079..59951
location: region:59079-59951:1
so has part: feature:59079-59951:1:exon
subclass of: SO_0000010

position:59079:1
position: 59079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59951:1
position: 59951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59079-59951:1:exon

DMP02_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00310
old locus tag: RVIR1_00630
EC number: 3.1.1.99
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMP-30/gluconolactonase/LRE family protein
translation: MSNPVVVCEETMLLGESPLWHPEQKCLYWVDIVAATLNRLNINNKSVKKFKMPSQIGSIGWRAKGGLIAALSDRFASIDTETGMAQTLALPLKKPPQDMFNDGKCDRQGRFWAATKDIAEESPVGSLYCLDVEGKAMEMANGFTVGNGIAWNLDNSRMYICDSPARQIYEYEFDPIKGQLGAFQVFAQISPSAGFPDGLTVDSEGYIWSCHWDGWQITRYKPTGEIDSVIPMPIPRPTSCCFGGEDLKTLYVTSASVGLSASILADAPQSGQLFALEIGVKGVPEPAYLG
SIO_010081: DMP02_RS00310
subclass of: SO_0000673
so part of: DMP02_RS00310
location: 59079..59951
location: region:59079-59951:1
so has part: feature:59079-59951:1:exon

WP_126322133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59079-59951:1:exon

DMP02_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00315
old locus tag: RVIR1_00640
so part of: sequence
location: 60157..61551
location: region:60157-61551:1
so has part: feature:60157-61551:1:exon
subclass of: SO_0000010

position:60157:1
position: 60157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61551:1
position: 61551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60157-61551:1:exon

DMP02_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00315
old locus tag: RVIR1_00640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035617.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar porter family MFS transporter
translation: MLERSNANWMVYAVSVFAALAGLLFGYDTGIISGAILFIKKDFSLSAFQVEMIVSAVLLGALIGSGFSGRLTDLFGRRKVLVFTAITFIIGSLSTALAPSVHWLIIGRIILGVAIGVGSFTAPLYIAEIAPQRIRGLLVSLNQLAITIGIVFSYLINYYFSAQGRWPWMLGLGVVPAAILLLGTLFLPESPRWMVLKGWEHKARTILQRIRGSENIHKEFEEIQQTVKMEKGTHRLLLAKWVRPILFISLGLSFFQQVTGINTIIYYAPTILQIAGFKQAGGAILATLGIGIVNVLFTLIALPLIDKWGRRPLLLLGLSGMFLSLAMMGAAFYFPEFAALRWVAVGSMIIYIASFAISLGPIMWLIISEIFPLNIRGVGASLAISASWGFNMLVALTFLTLIELLGPSHTFWLYAFLCILGGLFVYFMVPETKGCSLEHIEQNLRLGRPSRELGISLRKSMFFE
SIO_010081: DMP02_RS00315
subclass of: SO_0000673
so part of: DMP02_RS00315
location: 60157..61551
location: region:60157-61551:1
so has part: feature:60157-61551:1:exon

WP_126322134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60157-61551:1:exon

DMP02_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00320
old locus tag: RVIR1_00650
so part of: sequence
location: 61601..62389
location: region:61601-62389:1
so has part: feature:61601-62389:1:exon
subclass of: SO_0000010

position:61601:1
position: 61601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62389:1
position: 62389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61601-62389:1:exon

DMP02_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00320
old locus tag: RVIR1_00650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597836.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidoreductase
translation: MLKNKVVLITGSTNGIGAATARRCVEQGAKVMVHGRHEDRAKALVAKLGNDAAHYLIADLADENAYASLVNATIDKFGCLDGLVNNAGIYPRNNIDDASIELCEKVMRINFYAPLLLSKEAVKVFRKRGKGGAIVNIGSMNAHCGQPDLLIYSSSKGALMTMTRNLADSLGPDHVRVNQLNVGWTPTDNEVALKRREGLPDNWQEKIPKVYAPSGRLLSPENVAAHVTFWLSDQSAPVSGVVYEVEQYPIIGRNRLNDLVIT
SIO_010081: DMP02_RS00320
subclass of: SO_0000673
so part of: DMP02_RS00320
location: 61601..62389
location: region:61601-62389:1
so has part: feature:61601-62389:1:exon

WP_126322135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61601-62389:1:exon

DMP02_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00325
old locus tag: RVIR1_00660
so part of: sequence
location: 62444..63652
location: region:62444-63652:1
so has part: feature:62444-63652:1:exon
subclass of: SO_0000010

position:62444:1
position: 62444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63652:1
position: 63652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62444-63652:1:exon

DMP02_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00325
old locus tag: RVIR1_00660
inference: COORDINATES: similar to AA sequence:RefSeq:NP_820268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-galactonate dehydratase family protein
translation: MKIQEAKVFVSCPDRNFVTLKITTDEGVYGVGDATLNGRELAVKAYLEDLIPCLIGRDPAQIEDIWQYFYRGAYWRRGPVTMAAIAAIDMALWDIKGKVLNTPVYNLLGGKSRKGVMVYGHANGKDINDTVKEVGKYIEKGYLAVRAQTGVPGLKDSYGISAKDKMYYEPATKGLPQESEWSTEKYLNYVPKLFKKLREEYGDEVHFLHDSHHRLTPIEAARLGKELEPYHLFWLEDTVPAELQEGFRIIRQHTTTPLAVGEVFNTIWDTHILFTEQLIDYIRMSVVHGGGLTHMKKIAAMAEVYHVKTGCHGPTDVSPITMAAALHFGISINNFGIQEYMRHTDKTNEVFPHAYTFDKGYLYPGDKPGLGVDFDEKLAEKYPYERAYLPVNRKLDGTLFNW
SIO_010081: DMP02_RS00325
subclass of: SO_0000673
so part of: DMP02_RS00325
location: 62444..63652
location: region:62444-63652:1
so has part: feature:62444-63652:1:exon

WP_126322136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62444-63652:1:exon

DMP02_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: htpG
locus tag: DMP02_RS00330
old locus tag: RVIR1_00670
so part of: sequence
location: complement(63698..65599)
location: region:63698-65599:-1
so has part: feature:63698-65599:-1:exon
subclass of: SO_0000010

position:63698:-1
position: 63698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65599:-1
position: 65599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63698-65599:-1:exon

DMP02_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: htpG
locus tag: DMP02_RS00330
old locus tag: RVIR1_00670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035238.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone HtpG
translation: MTVAEKQTLGFQTEVNQLLQLMIHSLYSNKEIFIRELISNASDAVDKLRFKALQNPALQEDAQLKLSIEIDKAKRLLILNDNGIGMSREEVIANLGTIAKSGTKEFLASLTGNKAQDTQLIGQFGVGFYSAFMVAEKITVNTRAAGLPADEAICWESTGDGQYTIEPINKTTPGTEIILHLREGEDEFLENWRLRNIILKYSDHITLPINMKKERPVPETDAQKNESIEEQDIWETVNNATALWTLPKNQIKEDEYKAFYKHVAHDFQDPLAWSHNKVEGKQEYTTLLYVPSQAPFDLWNHEKPRGLKLYVKRVFIMDDAEQFLPRYLRFVKGIVDSNDLPLNISREILQSNKLVDNIRSVVSKRILELLANLAQDQTEQYKQFWNSFGNVLKEGFAEDFNNRDALAKLLRFSSTHLNNAEQIVSLEEYVARMPSTQDKIYYITAENYSSANSSPHLEIFRQKNIEVLLLHDRIDEWLVAHLTEFEGKTLQSIAKDADITGITGEENKEEQKKNEDEFKSLLEQMKEVLGDKVKEVRISQRLTISPACIVNEQNALSNQMRSMLQAAGQSIPASKPILELNPQHRLVQRLKEEQDDARLAEWTHLFLEQSILAEGGHLEDPAAFVKRLNDLLA
SIO_010081: DMP02_RS00330
subclass of: SO_0000673
so part of: DMP02_RS00330
location: complement(63698..65599)
location: region:63698-65599:-1
so has part: feature:63698-65599:-1:exon

WP_126323458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63698-65599:-1:exon

DMP02_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00335
old locus tag: RVIR1_00680
so part of: sequence
location: complement(65858..66391)
location: region:65858-66391:-1
so has part: feature:65858-66391:-1:exon
subclass of: SO_0000010

position:65858:-1
position: 65858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66391:-1
position: 66391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65858-66391:-1:exon

DMP02_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00335
old locus tag: RVIR1_00680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKFIRYCISTTKLKYKSIQRANSHPFFLRIIGQELANKNTVYIVQIVGKNSVFRLCAAELFNDHQLLQGLSPYDLLKILSNSNKKNFHNNNNLIIFPCRAQYKMIAKHYDHSSQQTIFTIEITQATNVIQKQFTALEILNNPLVLEKLSYQETYDLGFTVGSEAILKEVQKLTCLK
SIO_010081: DMP02_RS00335
subclass of: SO_0000673
so part of: DMP02_RS00335
location: complement(65858..66391)
location: region:65858-66391:-1
so has part: feature:65858-66391:-1:exon

WP_126322137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65858-66391:-1:exon

DMP02_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00340
old locus tag: RVIR1_00690
so part of: sequence
location: complement(66423..67184)
location: region:66423-67184:-1
so has part: feature:66423-67184:-1:exon
subclass of: SO_0000010

position:66423:-1
position: 66423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67184:-1
position: 67184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66423-67184:-1:exon

DMP02_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00340
old locus tag: RVIR1_00690
inference: COORDINATES: protein motif:HMM:NF017936.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MQIKYIIAEMQSILDRGDSKAGTKETIENFIQYLNNIAIGERLLSDKIIELLKLTDLSKITSEQGFFREFLKIEDLTGEIDRTGIFYLMKDQQTSCWHSLDTTENWRWIAGCDIIISILSQDKINNVVLNSKNPYLTIKKSTLFGVENNLTVAQDRDNFALVTCECIPGFTPSLYSNPTKEQLEILSFLYKKDDEKRITIEKLIPDVQLKEFNELKKKSITYTPFFSLDTPLNTPEKKGAPQNNVAVKNPLSN
SIO_010081: DMP02_RS00340
subclass of: SO_0000673
so part of: DMP02_RS00340
location: complement(66423..67184)
location: region:66423-67184:-1
so has part: feature:66423-67184:-1:exon

WP_126322138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66423-67184:-1:exon

DMP02_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00345
old locus tag: RVIR1_00700
so part of: sequence
location: complement(67211..67912)
location: region:67211-67912:-1
so has part: feature:67211-67912:-1:exon
subclass of: SO_0000010

position:67211:-1
position: 67211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67912:-1
position: 67912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67211-67912:-1:exon

DMP02_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00345
old locus tag: RVIR1_00700
inference: COORDINATES: protein motif:HMM:TIGR00697.1
GO process: GO:1990397 - queuosine salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: queuosine precursor transporter
translation: MLISKTKSLPTTPSNISYYILILGMVNITISLAADVVAYKLITLGPALLPGAPLIFPLTYIIGDIVAEVYGYIAAKKIIWITLICELFFALSIKLIIHLPSPHFWQYQLAYNAVIDPILRFVLAGILAVVSSSFINIYIISKWKILMKGRHFWLRSLGSSAIGGFILVLVTILFGFTGHIHWSKLTYMVLSVYSVEVFYSLLGVWPASIITGFLKLEEQLDVYDTKTNFNPFK
SIO_010081: DMP02_RS00345
subclass of: SO_0000673
so part of: DMP02_RS00345
location: complement(67211..67912)
location: region:67211-67912:-1
so has part: feature:67211-67912:-1:exon

WP_126322139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67211-67912:-1:exon

DMP02_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00350
old locus tag: RVIR1_00710
so part of: sequence
location: complement(67863..68540)
location: region:67863-68540:-1
so has part: feature:67863-68540:-1:exon
subclass of: SO_0000010

position:67863:-1
position: 67863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68540:-1
position: 68540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67863-68540:-1:exon

DMP02_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00350
old locus tag: RVIR1_00710
inference: COORDINATES: protein motif:HMM:NF024835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSSENKLNDILEYLMKEQRINTQQLHKHTGVSLSTLKRLRLNKENNPTVASLVPIAQYFNISVDQLIGIDPLEKNSRLQNEITVPIIEWENASNPQKDKCKQSFAPLLVTDMALSQHSYALLIKEQQWNNFLPGSLLIVDPHLTPNNRDFLIITEEKLQLPQLYQLLIFKSKLYLKTSDCASEIIPFTDNYKNLGVVIQIRMNYKDNKQHVNIKDEESSYDTQQY
SIO_010081: DMP02_RS00350
subclass of: SO_0000673
so part of: DMP02_RS00350
location: complement(67863..68540)
location: region:67863-68540:-1
so has part: feature:67863-68540:-1:exon

WP_126322140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67863-68540:-1:exon

DMP02_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00355
old locus tag: RVIR1_00720
so part of: sequence
location: 68795..69202
location: region:68795-69202:1
so has part: feature:68795-69202:1:exon
subclass of: SO_0000010

position:68795:1
position: 68795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69202:1
position: 69202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68795-69202:1:exon

DMP02_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00355
old locus tag: RVIR1_00720
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MENKKIFLLVEDDPIIQRVHRAFLEKMGFQVELAATGAQALEMFKSRAYHLIILDGGLPDMQGVEVGRKIRSLERENKTTRKPILLLSAYTSELLKRWCKEAEIDSFLIKPVDYKDLLFTLENYFSKGIFSDRAA
SIO_010081: DMP02_RS00355
subclass of: SO_0000673
so part of: DMP02_RS00355
location: 68795..69202
location: region:68795-69202:1
so has part: feature:68795-69202:1:exon

WP_126322141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68795-69202:1:exon

DMP02_RS07175
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07175
old locus tag: RVIR1_00730
so part of: sequence
location: complement(69447..69617)
location: region:69447-69617:-1
so has part: feature:69447-69617:-1:exon
subclass of: SO_0000010

position:69447:-1
position: 69447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69617:-1
position: 69617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69447-69617:-1:exon

DMP02_RS07175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07175
old locus tag: RVIR1_00730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIDGVLVGVGLAGLELGVAWILACVINHEPASEKKEEGDPSLKFSTGFVNLVNIK
SIO_010081: DMP02_RS07175
subclass of: SO_0000673
so part of: DMP02_RS07175
location: complement(69447..69617)
location: region:69447-69617:-1
so has part: feature:69447-69617:-1:exon

WP_172593942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69447-69617:-1:exon

DMP02_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00360
old locus tag: RVIR1_00740
so part of: sequence
location: complement(69872..71080)
location: region:69872-71080:-1
so has part: feature:69872-71080:-1:exon
subclass of: SO_0000010

position:69872:-1
position: 69872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71080:-1
position: 71080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69872-71080:-1:exon

DMP02_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00360
old locus tag: RVIR1_00740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic amino acid transport family protein
translation: MSNKIDTKFIGGVLLIVGTAVGGGMLALPIATAETGFINSLILMFICWFVMTASAFLVLEVNLWLPANTNIITMARILLGKWGETIAWISYLLLFYSVLAAYMAGGGDFLTGLLTSLGLNIPSWIAIILFTGILSYVVYKGIHYVDYVNRGLMFSKFSIYLLLVLFLIPFISISKLKEGNLAYLTGGATVMITSFTFANIIPSLRTYFHGDVIKLRKVILIGSLIPLVCYLFWDLTIMGILPRGGEHGLIDMLHSRHSTSEFVRQLSYFLNNGFISLLARIFTSICLATSFLASMLGLSDFLADGLRIAKRGKGNILVYAATLLPPLTIVLFYPGAFIGALSYAGIYCAILFIILPTLMAWRGRYSKTPLSQGFKLKGGKPLLLFLGIIGLLFVVFGIQAAL
SIO_010081: DMP02_RS00360
subclass of: SO_0000673
so part of: DMP02_RS00360
location: complement(69872..71080)
location: region:69872-71080:-1
so has part: feature:69872-71080:-1:exon

WP_126322142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69872-71080:-1:exon

DMP02_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00365
old locus tag: RVIR1_00750
so part of: sequence
location: 71511..71903
location: region:71511-71903:1
so has part: feature:71511-71903:1:exon
subclass of: SO_0000010

position:71511:1
position: 71511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71903:1
position: 71903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71511-71903:1:exon

DMP02_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00365
old locus tag: RVIR1_00750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019217382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MKETIVSIYDPAEVEGGLSLTAAASLHIKKMLAKQSDEKSFRLSVKQSGCSGFSYVVDYVKTLNTNDLQFSINDDLVVFVDQASFPYLKGICIDYVQNGLNGSLKFINPNQTAACGCGESFSIEKGKIEG
SIO_010081: DMP02_RS00365
subclass of: SO_0000673
so part of: DMP02_RS00365
location: 71511..71903
location: region:71511-71903:1
so has part: feature:71511-71903:1:exon

WP_126322143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71511-71903:1:exon

DMP02_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00370
old locus tag: RVIR1_00760
so part of: sequence
location: 71916..72185
location: region:71916-72185:1
so has part: feature:71916-72185:1:exon
subclass of: SO_0000010

position:71916:1
position: 71916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72185:1
position: 72185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71916-72185:1:exon

DMP02_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00370
old locus tag: RVIR1_00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011000311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr family phosphocarrier protein
translation: MLRKIITINNKLGLHARASMKWVKIARCFISEITLKCNGKQVDGKSILEVMGLTARQGSPVEVIVKGEDEAAALTVLEKLVTDRFGEEG
SIO_010081: DMP02_RS00370
subclass of: SO_0000673
so part of: DMP02_RS00370
location: 71916..72185
location: region:71916-72185:1
so has part: feature:71916-72185:1:exon

WP_126322144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71916-72185:1:exon

DMP02_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00375
old locus tag: RVIR1_00770
so part of: sequence
location: 72189..73100
location: region:72189-73100:1
so has part: feature:72189-73100:1:exon
subclass of: SO_0000010

position:72189:1
position: 72189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73100:1
position: 73100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72189-73100:1:exon

DMP02_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00375
old locus tag: RVIR1_00770
inference: COORDINATES: protein motif:HMM:NF018963.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1460 domain-containing protein
translation: MPYRCLIFFCLFLISLNSIANVRFTDQTAIQLINLNKENSLQQRIELHSAALLGAPYQAGALGEGLAGEYDRNPLYRFDRFDCETYVDTVMALALAKNFLDFKKKINQIRYKKAQIGFFQRNHFPSLDWIPNNKKNGSIRELSYSIAGQKTRMSTALINRRSWYQHLDIDRIQIPYLSPLEKKTYLDELKKRGNALTNNEKASIAYIPVADVLNDSQLRKRIPTASLVFLVGHDNYLNYRIGTPMNVLHMGFAIWDKGQLYLRMASSRAERVLDVRLQDYLKTYLALDTLKGISIWAIEETSN
SIO_010081: DMP02_RS00375
subclass of: SO_0000673
so part of: DMP02_RS00375
location: 72189..73100
location: region:72189-73100:1
so has part: feature:72189-73100:1:exon

WP_126322145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72189-73100:1:exon

DMP02_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pmbA
locus tag: DMP02_RS00380
old locus tag: RVIR1_00780
so part of: sequence
location: complement(73227..74588)
location: region:73227-74588:-1
so has part: feature:73227-74588:-1:exon
subclass of: SO_0000010

position:73227:-1
position: 73227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74588:-1
position: 74588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73227-74588:-1:exon

DMP02_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pmbA
locus tag: DMP02_RS00380
old locus tag: RVIR1_00780
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035519.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloprotease PmbA
translation: MPNKMDRPVDFVSKQTDYKTLLSEILQMAKKKGASQVEANITHDVGFSVTVRMNEVETIEHNRNKSLGINVYFDQRQGSASSSDFSLAAIENAVEAACHIARFTTEDPFSGLPDAELLAKSPPNLDLHHPWSIDPQNAIELGKDCERSALAIDKRITLSEGVTLSTHQGLYLYANSNNFIGSYPSSRHSLSCSLVAKDKKGMQRDGSYTVSRDPHQLDPTEKLAKKAAEATLKRLNATRLSTCQAPVIFHAEIASSLIGNFLSAISGGNLYRKASFLVNHLGQPIFSDKITIHEQPHLLKGLGSAPFDDEGVTTRNRTLVSNGVLQGYLLSSYSARKLGMQTTGNAGGAHNIVLETSQLSLEDLIKQMDRGLLVTELMGQGVNLVTGDYSRGAVGFWVEHGKIQYPVEEITIAGNLRDMYKNIVGIGNDIDHRSSILTGSILLENMMIAGLAS
SIO_010081: DMP02_RS00380
subclass of: SO_0000673
so part of: DMP02_RS00380
location: complement(73227..74588)
location: region:73227-74588:-1
so has part: feature:73227-74588:-1:exon

WP_197720783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73227-74588:-1:exon

DMP02_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00385
old locus tag: RVIR1_00790
so part of: sequence
location: 74700..75125
location: region:74700-75125:1
so has part: feature:74700-75125:1:exon
subclass of: SO_0000010

position:74700:1
position: 74700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75125:1
position: 75125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74700-75125:1:exon

DMP02_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00385
old locus tag: RVIR1_00790
inference: COORDINATES: protein motif:HMM:NF012790.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MQQFIEFSLRHWELWLAFLVILGFLLTFELHIKLTGASPLSVQQAIFLMNREEAILLDIRDANSFSKEHIAASINIPFSELAQKINQLDSYRERPIIINYSQGQAHHRAARLLKNAGFSKIYQLKGGIMSWKNAALPLAKK
SIO_010081: DMP02_RS00385
subclass of: SO_0000673
so part of: DMP02_RS00385
location: 74700..75125
location: region:74700-75125:1
so has part: feature:74700-75125:1:exon

WP_126322146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74700-75125:1:exon

DMP02_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: grxC
locus tag: DMP02_RS00390
old locus tag: RVIR1_00800
so part of: sequence
location: 75149..75415
location: region:75149-75415:1
so has part: feature:75149-75415:1:exon
subclass of: SO_0000010

position:75149:1
position: 75149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75415:1
position: 75415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75149-75415:1:exon

DMP02_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: grxC
locus tag: DMP02_RS00390
old locus tag: RVIR1_00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011216199.1
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin 3
translation: MSKIVIYTTAVCPYCNNAKQLLAQKRLDYTEVRVDTDPEKMKKMIELSGRRTVPQIFINGKPIGGFDDLSALNASGELDDLLKEGNAS
SIO_010081: DMP02_RS00390
subclass of: SO_0000673
so part of: DMP02_RS00390
location: 75149..75415
location: region:75149-75415:1
so has part: feature:75149-75415:1:exon

WP_126322147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75149-75415:1:exon

DMP02_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: secB
locus tag: DMP02_RS00395
old locus tag: RVIR1_00810
so part of: sequence
location: 75412..75921
location: region:75412-75921:1
so has part: feature:75412-75921:1:exon
subclass of: SO_0000010

position:75412:1
position: 75412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75921:1
position: 75921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75412-75921:1:exon

DMP02_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: secB
locus tag: DMP02_RS00395
old locus tag: RVIR1_00810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034932.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-export chaperone SecB
translation: MTNEQTNNAPPTPEFTIQRVYVKDLSLECPQSPQVFQEEWQPELNLQFAMNTSTVAETIYELILQITVTATSKEKTLFLIEIKQAGLFTLKGFTEEQIQQVLSITCPTILFPYAREAVSDLVGRAGFPPLYLAPVNFEALYMQQMQEQGEKEGGGTSKKANSKNSIITH
SIO_010081: DMP02_RS00395
subclass of: SO_0000673
so part of: DMP02_RS00395
location: 75412..75921
location: region:75412-75921:1
so has part: feature:75412-75921:1:exon

WP_126322148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75412-75921:1:exon

DMP02_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: coaE
locus tag: DMP02_RS00400
old locus tag: RVIR1_00820
so part of: sequence
location: 75928..76611
location: region:75928-76611:1
so has part: feature:75928-76611:1:exon
subclass of: SO_0000010

position:75928:1
position: 75928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76611:1
position: 76611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75928-76611:1:exon

DMP02_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: coaE
locus tag: DMP02_RS00400
old locus tag: RVIR1_00820
EC number: 2.7.1.24
inference: COORDINATES: protein motif:HMM:TIGR00152.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MFAIALTGGIASGKSTVARCFSDLGVMVIDADQIAHEMLCDPEVLQQVIAYFGPSVLSTDKQLHRPSLREIIFSDSKARDFLEQLLHPLIYKQIQASIQTVKSNYCLVVIPLLFEERTTRLLKEKPVSGITVELNRIMLVTASKALQIQRAQQRDQVKKEQIDAILSVQSSVNESFNKADDIIYNKTTLSDLRQSTARFHRMYLAFADAKNIVLEQSAFLRYYLALK
SIO_010081: DMP02_RS00400
subclass of: SO_0000673
so part of: DMP02_RS00400
location: 75928..76611
location: region:75928-76611:1
so has part: feature:75928-76611:1:exon

WP_126322149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75928-76611:1:exon

DMP02_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00405
old locus tag: RVIR1_00830
so part of: sequence
location: 76740..78989
location: region:76740-78989:1
so has part: feature:76740-78989:1:exon
subclass of: SO_0000010

position:76740:1
position: 76740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78989:1
position: 78989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76740-78989:1:exon

DMP02_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00405
old locus tag: RVIR1_00830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKDAIRILKNISSVTLGVTQVIVDGLSSVRQIGDFTSASWAKGASGTASVVEGEIYRKNIFEGLGLFSLLSQKGLSKYLILQALETELSRLKEYEEAFKQRLHCFFTAVKKDREDKGDAEALDEIRLLENSVLEEKEVDNFFSFFETFKEKRFGTSKFIEFSLPEQFKQLQEEFKQLKEIKKQSTCAFLTSYKANKTLLETAESLGLKKPEIEQAEKRLKVLQKMLVERVSDPKKWVFIPGEDINPALLTKLQKELSIGKRRLWPLRLSMLFSASAGLAVGIVTFYTFPAVLTGLGLSLSLTALSAIIWPLAILAAISYGILIYNTMADLIVNETLSKWWRALNAEIGQGHHPLKYAFRVVTKALSQLFIKLAQWFRVKPEENGFVYSLRIILSLLMVSFAVMAALTTGYTAFTQLQSYLSVVVGVIIALPLMISDLTFTLKNSFESIALLSGISLANLTDPIKEGWKKLQEQLARENYFQLTLHLLRLPLELLLSVFKAAIFCLHVIFISVASDRLFSLPCWVTLIFTAGSEFLTDICPIFGKKEAGAGHDHDHGGIISWIAKAVFFVPATILGLLNYLFSQLNRLSSNPEHKLEVLGCWAAIQQEWNQFDIRHLHEEKDVTQEKTDDISQKAELPNQIVLQKAIKICDKQIDRLDHGFFSSKLAKDKKEIFKSCKATFIEACEKGTNVSSIKIDVDKDGILAKHRFFNRDKQTESARQLEKIQYWLAGRSAATSNHNASVLMTAA
SIO_010081: DMP02_RS00405
subclass of: SO_0000673
so part of: DMP02_RS00405
location: 76740..78989
location: region:76740-78989:1
so has part: feature:76740-78989:1:exon

WP_126322150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76740-78989:1:exon

DMP02_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00410
old locus tag: RVIR1_00840
so part of: sequence
location: complement(79095..79922)
location: region:79095-79922:-1
so has part: feature:79095-79922:-1:exon
subclass of: SO_0000010

position:79095:-1
position: 79095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79922:-1
position: 79922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79095-79922:-1:exon

DMP02_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00410
old locus tag: RVIR1_00840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEIQNGVIKNIKALCPDGQRYLEKIENTLNLSKRNGSFDLGFVYTYSESDSSTWGSVKSTLPNKDDFKKLFPSIQKIDRSDRQEKKIPEIVEIIKKDILNTLIALEKNHANKYNAYHKFLVWIAHISKRVSGLLIFGVTTIAIAAVAAAIIFGIGTFAPTAASIVKFISTNAALVASTIVATISLTGISHVISRYILKKRNEALPTVVTTKENCDTITKVLAAGKQEKISRPPTNDLGTLKAPVPSAPYSPGCNDEPANTGPDIKDAFSRAPSR
SIO_010081: DMP02_RS00410
subclass of: SO_0000673
so part of: DMP02_RS00410
location: complement(79095..79922)
location: region:79095-79922:-1
so has part: feature:79095-79922:-1:exon

WP_126322151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79095-79922:-1:exon

DMP02_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00415
old locus tag: RVIR1_00850
so part of: sequence
location: complement(80274..81638)
location: region:80274-81638:-1
so has part: feature:80274-81638:-1:exon
subclass of: SO_0000010

position:80274:-1
position: 80274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81638:-1
position: 81638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80274-81638:-1:exon

DMP02_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00415
old locus tag: RVIR1_00850
inference: COORDINATES: protein motif:HMM:TIGR01844.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family outer membrane protein
translation: MRILQARLYQQTPTLIFKLLLGFTLFFAILKPCFATDLVDIYQAAVKNDTVYQAAVSTRLSTREAIPQSVAALLPSINGQANLTSNYQNITQAAPGNPLGVSQFPSRGYSISINQPLLNIGDWLAVKQANNTARQADATLGAAAQSLVYRVANAYFQVLLAQDNLHLAQSEKTANAKQLEQAQERVRVGLDALTTVYEAKAAYDKSIAAEITVQNALRNSQETIRQITGQTYANLNTFKQVLPLLSPQPANVEQWISTATNYNLNLMASRYAMAAARDNIKVKASGHLPSVNLVGSYGRDDGLNIGTTNRNSAVVGLQLNVPLFSGGAVSSNTRKAEYDFQTASANLDNQYRQVIVTTRQKYNDVLADISKIKAERQAIKSAQLSLDSTQESFSAGTRTIVDVLLAQQNLYDAKRNAASDQYTYLLDSLLLKQEAGILKPDDLQQINQWLRKNS
SIO_010081: DMP02_RS00415
subclass of: SO_0000673
so part of: DMP02_RS00415
location: complement(80274..81638)
location: region:80274-81638:-1
so has part: feature:80274-81638:-1:exon

WP_126322152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80274-81638:-1:exon

DMP02_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00420
old locus tag: RVIR1_00860
so part of: sequence
location: 81731..82354
location: region:81731-82354:1
so has part: feature:81731-82354:1:exon
subclass of: SO_0000010

position:81731:1
position: 81731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82354:1
position: 82354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81731-82354:1:exon

DMP02_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00420
old locus tag: RVIR1_00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035108.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MQPNFTSKDVKILEQRRVYQGHFQLDCLKLQYRLFNGGWGKPVFREVFERGDAVAVLLFDPQRDQLVLIEQFRVGTLKKTNNPWLIEIVAGVMDAEESAEQVAKRETKEETGLSLHNLFPISHHWVSPGGSTERIYLFCAQVDSSLAQGIHGLESEGEDIRLHLVPLKEAYNLVNEGKIDNATTIIALLWLQQNEQKVRKAWLTNVD
SIO_010081: DMP02_RS00420
subclass of: SO_0000673
so part of: DMP02_RS00420
location: 81731..82354
location: region:81731-82354:1
so has part: feature:81731-82354:1:exon

WP_126322153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81731-82354:1:exon

DMP02_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: parE
locus tag: DMP02_RS00425
old locus tag: RVIR1_00870
so part of: sequence
location: 82357..84258
location: region:82357-84258:1
so has part: feature:82357-84258:1:exon
subclass of: SO_0000010

position:82357:1
position: 82357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84258:1
position: 84258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82357-84258:1:exon

DMP02_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: parE
locus tag: DMP02_RS00425
old locus tag: RVIR1_00870
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034957.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MKSSSSSKRYTAEAIEVLSGLDPVKRRPGMYTDTSRPNHLAQEVIDNSVDEAVAGYAKHIEVTYYPDNSLEVRDDGRGMPVDIHPEEKVTGVELILTRLHAGGKFNHKNYRYSGGLHGVGVSVVNALSSRLEVMIKRDGFIYQMQFEHGNKKSPLKKLGRTNKAETGTTIHFWPDKPYFDTEKFSVSRLKHSLRAKAVLCPGLHVTFNDKHSNKKEEWFYEEGVISYLKENLRQYDYVPKEPFHGHFAAENEEVDWAVCWLLESGEGLMESYVNLIPTIQGGTHVNGLRTGLLEAMREFCELRDLLPRNLKLAPEDVWEGCHYVLSVKLLEPQFSGQTKERLTSRESASFVSGVIKDAFSLWLNQHVTEGESLAELMIANAQKRLRTSKQVVRKKILSGAVLPGKLADCTQTDLSRTELFLVEGDSAGGSAKQARDRDFQAIMPLRGKILNSWEVASNQLLSSQEIHDITVAVGVDPGSADLTGLRYGKICILADADSDGLHIATLLCGLFLKHFKPLTVQGHVYIAMPPLYRIDIGKEVYYALDDTEKQSILDRLSVEKKKGKISVQRFKGLGEMNPLQLRETTMAPDTRRLVQLTIDGEKETISLMDMLLAKKRAADRKNWLEKKGDRAIV
SIO_010081: DMP02_RS00425
subclass of: SO_0000673
so part of: DMP02_RS00425
location: 82357..84258
location: region:82357-84258:1
so has part: feature:82357-84258:1:exon

WP_126322154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82357-84258:1:exon

DMP02_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00430
old locus tag: RVIR1_00880
so part of: sequence
location: complement(84313..85179)
location: region:84313-85179:-1
so has part: feature:84313-85179:-1:exon
subclass of: SO_0000010

position:84313:-1
position: 84313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85179:-1
position: 85179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84313-85179:-1:exon

DMP02_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00430
old locus tag: RVIR1_00880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEIKNGVIKNIDKLSPESQKYLKELTEDLKLDNKPNQFNIGFLYTYNVRADEKWGDAKEKFKDIKEALKKKFRAIKDVCTKKRQEMEISEVVTRIKDRVLTKIKAKEKKHLESCQSTFNRRRTLANFLKKLTIGIFGTTFFALATTALITNGYISLPVIMPIIMPVVTLAMANPIIVGAALVAIMSTLFLTSWKAVSSKRNAKHALDEAEKQTNGNIDSLDRAMDQSITPTKSPSYTGPAPLQTTHAPTFVVGNRKQNNPPPHNGEDVVDNQGPNDPFYYTLNPLNR
SIO_010081: DMP02_RS00430
subclass of: SO_0000673
so part of: DMP02_RS00430
location: complement(84313..85179)
location: region:84313-85179:-1
so has part: feature:84313-85179:-1:exon

WP_126322155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84313-85179:-1:exon

DMP02_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00435
old locus tag: RVIR1_00890
so part of: sequence
location: 85412..86188
location: region:85412-86188:1
so has part: feature:85412-86188:1:exon
subclass of: SO_0000010

position:85412:1
position: 85412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86188:1
position: 86188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85412-86188:1:exon

DMP02_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00435
old locus tag: RVIR1_00890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNQLKGQDVLYCLFGLLIRQQSYVYLDYSAIDKEITPNRFAGVLESFPVNSFIEKAYASGNLVAKLLVKDLFKNQLKNFNKRVSLDQEQSILIHNLPAILDFLGSFIGLSSGKTVNKLLALVDESTLRDFLIENPEVAKEIVALSVINMFIHTILPLCAELKNTYIGNHALNIFKAYLKQWPLFLRSSPSSLQAFFSALSVSISKSVSNGLTKVVDTGFALAANRPTFFRGIALDGAEKLCQVEAKVAISASVSGPR
SIO_010081: DMP02_RS00435
subclass of: SO_0000673
so part of: DMP02_RS00435
location: 85412..86188
location: region:85412-86188:1
so has part: feature:85412-86188:1:exon

WP_126322156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85412-86188:1:exon

DMP02_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00440
old locus tag: RVIR1_00900
so part of: sequence
location: complement(86166..86783)
location: region:86166-86783:-1
so has part: feature:86166-86783:-1:exon
subclass of: SO_0000010

position:86166:-1
position: 86166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86783:-1
position: 86783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86166-86783:-1:exon

DMP02_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00440
old locus tag: RVIR1_00900
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005772481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MLSVSLHEPTILKSLREETAQLSSSVMQISPEQGQFMALLIELIGAKKTLEIGVYTGYSSLAVALALPDNGQIIACDISTETSAIAKRFWITAGVEQKIDLRLAPALQTLDQLIEQGASNTFDFAFIDADKCNYTHYYERSLALVRPGGLILIDNVLWSGRVADPKNHDKQTEAIRQLNTMIYQDERVNMSLLPLGDGITLVQKR
SIO_010081: DMP02_RS00440
subclass of: SO_0000673
so part of: DMP02_RS00440
location: complement(86166..86783)
location: region:86166-86783:-1
so has part: feature:86166-86783:-1:exon

WP_197720784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86166-86783:-1:exon

DMP02_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00445
old locus tag: RVIR1_00910
so part of: sequence
location: 86951..87026
location: region:86951-87026:1
so has part: feature:86951-87026:1:exon
subclass of: SO_0000663

position:86951:1
position: 86951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87026:1
position: 87026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86951-87026:1:exon

DMP02_RS00445
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS00445
old locus tag: RVIR1_00910
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:86985..86987,aa:Glu,seq:ttc)
SIO_010081: DMP02_RS00445
subclass of: SO_0000673
so part of: DMP02_RS00445
location: 86951..87026
location: region:86951-87026:1
so has part: feature:86951-87026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86951-87026:1:exon

DMP02_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00450
old locus tag: RVIR1_00930
so part of: sequence
location: 87230..87847
location: region:87230-87847:1
so has part: feature:87230-87847:1:exon
subclass of: SO_0000010

position:87230:1
position: 87230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87847:1
position: 87847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87230-87847:1:exon

DMP02_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00450
old locus tag: RVIR1_00930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597801.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MEKEKTFKDLLDGYRLFRQKYTGDNSIMKNLSAQGQNPQFMLVSCCDSRVDPALILQCDPGDLFVVRNIANIVPPYEKDEALHGTSAALEFGIRRLNVRDLILLGHSQCAGIRVLLQNGNLQQNDFITKWVSSIKIPEAELHESKNPDEYAKLGLTSSYENCLTFPWIKEKVDKQELAIHRWFFDIQSGQIFTYSDKYDIYQPLE
SIO_010081: DMP02_RS00450
subclass of: SO_0000673
so part of: DMP02_RS00450
location: 87230..87847
location: region:87230-87847:1
so has part: feature:87230-87847:1:exon

WP_126322158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87230-87847:1:exon

DMP02_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00455
old locus tag: RVIR1_00940
so part of: sequence
location: complement(87874..88608)
location: region:87874-88608:-1
so has part: feature:87874-88608:-1:exon
subclass of: SO_0000010

position:87874:-1
position: 87874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88608:-1
position: 88608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87874-88608:-1:exon

DMP02_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00455
old locus tag: RVIR1_00940
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MPQNIYDNPDFFGEYSQLNRSKRGLEGAPEWPALCAQLPLLKNLNIVDLGCGYGWFCRYAKEQGAAQVLGIDISEKMIEKAKTMPYADSINYRISDMEQLALPQSTFNLVYSSLTLHYIENISELLKNIYDALVPDGHFVFSLEHPIYTAPIQKNPDWIISTDGKKSWPVNHYQQEGERIKNWLGKAVKKQHRTLGTYLNLLIQQGFTLSHVEEWGPSKEQLAAIPELMDERERPMLLLIAAHR
SIO_010081: DMP02_RS00455
subclass of: SO_0000673
so part of: DMP02_RS00455
location: complement(87874..88608)
location: region:87874-88608:-1
so has part: feature:87874-88608:-1:exon

WP_126322159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87874-88608:-1:exon

DMP02_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsxB
locus tag: DMP02_RS00460
old locus tag: RVIR1_00950
so part of: sequence
location: complement(88652..89242)
location: region:88652-89242:-1
so has part: feature:88652-89242:-1:exon
subclass of: SO_0000010

position:88652:-1
position: 88652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89242:-1
position: 89242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88652-89242:-1:exon

DMP02_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsxB
locus tag: DMP02_RS00460
old locus tag: RVIR1_00950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006872540.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit RsxB
translation: MNNLVEQIDGLLPQTQCGQCDYDGCLPYAEAIADGEAINRCPPGGIKTLKALAELLKKDATPFLEGMLKQEKLPATAYIRETECIGCTKCIQACPVDAILGAAKQLHTVLTQECTGCGLCVAPCPVDCIDIISLTTPAYQPKKTRQRFYARKERLANIKMQAIQQQKNEEIINQRTYIEAAIARSKTKKLNVKVTI
SIO_010081: DMP02_RS00460
subclass of: SO_0000673
so part of: DMP02_RS00460
location: complement(88652..89242)
location: region:88652-89242:-1
so has part: feature:88652-89242:-1:exon

WP_126322160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88652-89242:-1:exon

DMP02_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: metG
locus tag: DMP02_RS00465
old locus tag: RVIR1_00960
so part of: sequence
location: complement(89239..90954)
location: region:89239-90954:-1
so has part: feature:89239-90954:-1:exon
subclass of: SO_0000010

position:89239:-1
position: 89239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90954:-1
position: 90954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89239-90954:-1:exon

DMP02_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: metG
locus tag: DMP02_RS00465
old locus tag: RVIR1_00960
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035957.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MIHEDGELSGNTAEDSSAKSILVTTALPYANGSIHLGHLLEHIQADIWVRFQKMLGRNCIFLSGEDAHGTPVMLAAKQRGIEPEELVKLIASEHKADLDAFHISFDNYYTTHSPENKALVELIYARMQAKGDIRTQVINQAYDPEAKMFLPDRYVKGNCPCCKTPDQYGDNCEACGSTYTPLDLIDPKSTLSGATPIAKESEHYFFQLSNYADFLRTWITSEHHLAEEVSNKLLEWFKEGLHDLDISRDTPYFGFKIPGTEDKYFYVWIDAPIGYMACFKNLCKRRPDLNFDEYWTNNEKVALYHFVGKDIINFHAIFWPAILKSADFRTPSGVFVHGYLTVNGQKMSKSRGTFITAQDYRQHLDPEYLRYYFAAKLNKKAEDIDLNLEDFTQRINADLVGKLVNIASRCASFISKRFDYKLSPSCHAPKLVAHFIEKGDEIAQAYENREFSRAIRTIMDLADQANQIIDAEKPWALVKIPEQIERAHAVCSLGLNLFRILMTYLKPVLPVTAEKVETFLNIVPMTWENRQELLCDHTIRSFTPLLQRIQEEAIRAIQNDALTATQNLKIE
SIO_010081: DMP02_RS00465
subclass of: SO_0000673
so part of: DMP02_RS00465
location: complement(89239..90954)
location: region:89239-90954:-1
so has part: feature:89239-90954:-1:exon

WP_126322161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89239-90954:-1:exon

DMP02_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: apbC
locus tag: DMP02_RS00470
old locus tag: RVIR1_00980
so part of: sequence
location: 91243..92064
location: region:91243-92064:1
so has part: feature:91243-92064:1:exon
subclass of: SO_0000010

position:91243:1
position: 91243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92064:1
position: 92064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91243-92064:1:exon

DMP02_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: apbC
locus tag: DMP02_RS00470
old locus tag: RVIR1_00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034990.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster carrier protein ApbC
translation: MLKITDRVKHIIAIASGKGGVGKSTTAVNLALALAAKDGVRVGLLDADIYGPNQPQMLGVNEKPTSKDGKTLEPVHAHGIQSMSIGYLIDINTPMVWRGPMATGALQQLLNDTHWDNLDYLIVDLPPGTGDIQLSLTQKIPLAGAIIVTTPQDIALLDVRKAIGMFSKVKVPLLGVVENMCAHVCSQCGHEEPIFGEGGGERIAKECGVNLLGALPLDSRIRKQADSGKPIFLEDTEGAIANIYRSIADKIVQQLAGQPKGPTRFPKIVIEKK
SIO_010081: DMP02_RS00470
subclass of: SO_0000673
so part of: DMP02_RS00470
location: 91243..92064
location: region:91243-92064:1
so has part: feature:91243-92064:1:exon

WP_126322162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91243-92064:1:exon

DMP02_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dcd
locus tag: DMP02_RS00475
old locus tag: RVIR1_00990
so part of: sequence
location: 92139..92705
location: region:92139-92705:1
so has part: feature:92139-92705:1:exon
subclass of: SO_0000010

position:92139:1
position: 92139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92705:1
position: 92705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92139-92705:1:exon

DMP02_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dcd
locus tag: DMP02_RS00475
old locus tag: RVIR1_00990
EC number: 3.5.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004922407.1
GO function: GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO process: GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCTP deaminase
translation: MSIKSDTWICRMAEEAKMIEPFEPQQIRRNETGRIISYGVSSYGYDVRCANEFHIFTNINSVIVDPKCFPDASFIKVKDDVCIIPPNSFALAHTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWEGQVTLEFSNTTPLPAKIYANEGVAQMLFLESDEVCQVSYRDRQGKYQGQKGVTLPVA
SIO_010081: DMP02_RS00475
subclass of: SO_0000673
so part of: DMP02_RS00475
location: 92139..92705
location: region:92139-92705:1
so has part: feature:92139-92705:1:exon

WP_126322163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92139-92705:1:exon

DMP02_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00480
old locus tag: RVIR1_01000
so part of: sequence
location: complement(92717..94657)
location: region:92717-94657:-1
so has part: feature:92717-94657:-1:exon
subclass of: SO_0000010

position:92717:-1
position: 92717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94657:-1
position: 94657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92717-94657:-1:exon

DMP02_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00480
old locus tag: RVIR1_01000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: right-handed parallel beta-helix repeat-containing protein
translation: MCLTLILFGTTEIAHANFTLPPRLSANGYASNHAVAQTDLLLPLKADSTHNLYVDPSLSYASNNQGELDVGLGYRWIQNKTAILGGYLFGGYSRIDNNARLYVLNPGVEILASRWDAHLNVYFPMGDRHYDAGNSTGAPYFLGHTEQRSLFQADQFVGDGGDVKFSYQFFPNSSWKGYLGSYFFTPPQSENIWGGAAGLEYWLENYLKIIGSYTYDKLHHSTYAVGLGIEFGGTRIHRADPDIEERLTDPVARHLAELGEGSFIPARTNKQFLGTQVLRNNLAFFSQTGGPNNDGNGLILANCTYENPCGPTDFSQMGVNTLNNLLPNTRMYFNGGSYGTPQSDNVVELNLGQSIHSRTSDYSQAATGSARSTFKRELILNGNNTIENIILLAVGDPNNSTGINVAKGTNNQITGSQIGNANNRFSSGIQDSGQNTLLTNNNIFARDFGIEIQNASNSTFSNNQISLDGNTNPIGISINHGNSILIKNTQIQISIQKNTGGTGTSASGISASNSSVNIQGSVIQMQGGSSDGGTLTGVTASNSSTMAIENTQILVKPVTTTNLRGIETSEHAVVNANNITLDIMNSNLSGSTIALITTNSQIIINNSQLNAGGGTATEIVVPLDQGVTINNSICKINGNILNCPSH
SIO_010081: DMP02_RS00480
subclass of: SO_0000673
so part of: DMP02_RS00480
location: complement(92717..94657)
location: region:92717-94657:-1
so has part: feature:92717-94657:-1:exon

WP_126322164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92717-94657:-1:exon

DMP02_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsmA
locus tag: DMP02_RS00485
old locus tag: RVIR1_01010
so part of: sequence
location: complement(94810..95601)
location: region:94810-95601:-1
so has part: feature:94810-95601:-1:exon
subclass of: SO_0000010

position:94810:-1
position: 94810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95601:-1
position: 95601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94810-95601:-1:exon

DMP02_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsmA
locus tag: DMP02_RS00485
old locus tag: RVIR1_01010
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034715.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MSAFQTRKRFGQHFLHESFIIEKIISAIHPKKMDPMLEIGPGMGALTQQLLPLLDRLIVVELDKDLIPLLKKQCAPLGELIIYQADALKFDLRSAGEPNIRWRIVGNLPYNISTPLLFHLLEQVDAIQDMHFMLQKEVVERMVAQPGNAHYGRLSVMIQYYCQVKKLFIVKPGAFNPPPKVDSAVIRLIPYQTPPWQADDPLLFAEIVRAAFSHRRKMLRNNLAQLINVQQFESLKIDPKQRAEQLSVQDYVTLSNFLMNAKQ
SIO_010081: DMP02_RS00485
subclass of: SO_0000673
so part of: DMP02_RS00485
location: complement(94810..95601)
location: region:94810-95601:-1
so has part: feature:94810-95601:-1:exon

WP_126322165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94810-95601:-1:exon

DMP02_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00490
old locus tag: RVIR1_01020
so part of: sequence
location: complement(95618..96766)
location: region:95618-96766:-1
so has part: feature:95618-96766:-1:exon
subclass of: SO_0000010

position:95618:-1
position: 95618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96766:-1
position: 96766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95618-96766:-1:exon

DMP02_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00490
old locus tag: RVIR1_01020
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011946556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoamide acetyltransferase family protein
translation: MTVFYLPDLGEGLPDAEIHEWHIKVGDVVKMDAPMVAMETAKAVVDIPVPFNGKVVKLYGHPGDIIKTGAALIDIESDNKDTASTDKATVVGNLQTSDTIVEELATGIQPSSNGTATAQGIKATPSIRALAKKMQVDLAHCIGTGPAGQITVTDLENATKITTPASPLTKPTEDYEPLRGVRRAMAMAMSKSHQTVVPVTLVDDADIHAWPEKTDVSLRLIRAIMAACQREPRLNAWLDETHLALRQHPHINLGIAMDASEGLFVPVLKNVAQCSAIDLRKKIDEFKVRVKNRSIPPEDLSGATFILSNVGVFAGRYASPLIIPPMVAILAVGRISEAVVAEQGKPAIHKLLPLSLTVDHRAITGGEAARFLSALIRDLQTS
SIO_010081: DMP02_RS00490
subclass of: SO_0000673
so part of: DMP02_RS00490
location: complement(95618..96766)
location: region:95618-96766:-1
so has part: feature:95618-96766:-1:exon

WP_126322166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95618-96766:-1:exon

DMP02_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00495
old locus tag: RVIR1_01030
so part of: sequence
location: complement(96763..97743)
location: region:96763-97743:-1
so has part: feature:96763-97743:-1:exon
subclass of: SO_0000010

position:96763:-1
position: 96763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97743:-1
position: 97743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96763-97743:-1:exon

DMP02_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00495
old locus tag: RVIR1_01030
EC number: 1.2.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005771912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-ketoacid dehydrogenase subunit beta
translation: MTEITLIAAINQALNYEMNADQEVVLLGEDIGINGGVFRATQGLFEKFGADRVLDTPLAESMIAGLSIGMATQGLKPVAEFQFMGFSYPALDQIINHAARFRNRTRGRLSCPLVFRMPYGAGIHAPEHHSESTETLFAHTPGLRVVVPSSPARAYGLLLAAIRDPDPVIFLEPTRLYRLQKQKVADTGEALPLDKSFLLREGKDITLISWGAMLHESLMAADNLLTRGLSADLIDVATLKPLDCDTLLASVEKTGRCVIIHEAARFCGVGAEIAAQLSEKAFLSLKAPIQRVTGYDVTVPYAQLEKQYLPSLTKIINVIDQTLEFT
SIO_010081: DMP02_RS00495
subclass of: SO_0000673
so part of: DMP02_RS00495
location: complement(96763..97743)
location: region:96763-97743:-1
so has part: feature:96763-97743:-1:exon

WP_126322167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96763-97743:-1:exon

DMP02_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pdhA
locus tag: DMP02_RS00500
old locus tag: RVIR1_01040
so part of: sequence
location: complement(97740..98825)
location: region:97740-98825:-1
so has part: feature:97740-98825:-1:exon
subclass of: SO_0000010

position:97740:-1
position: 97740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98825:-1
position: 98825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97740-98825:-1:exon

DMP02_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pdhA
locus tag: DMP02_RS00500
old locus tag: RVIR1_01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035952.1
GO component: GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO function: GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
translation: MSEVASFSIDYTCFLDANGKPTQDLPSFVKKETLLPLYQAMLLTRLFDSKAVTLQRTGKLNTYASTLGQEAISVGIGASMRKEDILCPFYRDYGAQLMRGVKMQEILSFWKGNEWGNHFSECPNDFPICVPIATQVLHAAGVATAFKLRKQARVVVTTCGDGATSEGDFYEALNIAGAWQLPVVFVINNNQWAISTARKAQTHAQTLAQKAIAAGIQGEQVDGNDVVAVRFAVERAAEKARTGKGSSVIEALSYRLSDHTTADDAARYRASEELQHAYKEEPISRLRTYLLDQSYWTEEEDKHFIQQCNLTIENAVNKYLALPKPAITDLFDYHFAQLPADLNEQRIEATALFKLHEMLEL
SIO_010081: DMP02_RS00500
subclass of: SO_0000673
so part of: DMP02_RS00500
location: complement(97740..98825)
location: region:97740-98825:-1
so has part: feature:97740-98825:-1:exon

WP_126322168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97740-98825:-1:exon

DMP02_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00505
old locus tag: RVIR1_01050
so part of: sequence
location: complement(98831..99898)
location: region:98831-99898:-1
so has part: feature:98831-99898:-1:exon
subclass of: SO_0000010

position:98831:-1
position: 98831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99898:-1
position: 99898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98831-99898:-1:exon

DMP02_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00505
old locus tag: RVIR1_01050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035013.1
GO function: GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Glu/Leu/Phe/Val dehydrogenase family protein
translation: MLSNDLLQYAKNLGFGELHFKIDQTKELYAIIGIHSTQRGPALGGCRCIEYVSIDLAIHDVLRLAQGMSYKAAMANLPLGGGKTVLMRPKQLKNRDAYFQTLGRFVNDLKGRYIIAMDSGVVMNDMDNIALETPYVVTTSKHKGDPAPYTALGVLRGIEAAVKFKFQQDTLNGLHVALQGLGHVGYNLANRLHKQGVRLTVCDRDQKLTTHCAKELGATIVKSEDIYAVECDIFSPCALGAILNDESISQLKAAIVAGAANNQLAEPRHASLLKEKGILYAPDYVINAGGLIYAYAEYRNYINKEFVEQHIQAIYDTLLELFQRAHKENKLPHEVADSMAEARLIKPNAHAIIGD
SIO_010081: DMP02_RS00505
subclass of: SO_0000673
so part of: DMP02_RS00505
location: complement(98831..99898)
location: region:98831-99898:-1
so has part: feature:98831-99898:-1:exon

WP_126322169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98831-99898:-1:exon

DMP02_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00510
old locus tag: RVIR1_01060
so part of: sequence
location: complement(100103..101278)
location: region:100103-101278:-1
so has part: feature:100103-101278:-1:exon
subclass of: SO_0000010

position:100103:-1
position: 100103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101278:-1
position: 101278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100103-101278:-1:exon

DMP02_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00510
old locus tag: RVIR1_01060
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035810.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: METYLVGGAVRDQLLGHPIKERDYVVVGATPEQMLAKGFRLVGKDFPVFLHPKTHEEYALARTERKIGPGYKGFSCYAAPDVTLEADLKRRDLTINAIAQTTTGEIIDPYHGQDDIAKRIFRHISPAFIEDPVRILRVARFMASFAHLGFHVAPETMQLMKTMVKAGEVNALVPERVWQEFSLALTKPTPQAFIKTLFDCGALAILFPTLQMLYTDFISASDKQKPNNLATFDCAVKLTSDPQIRFAALLCHLGRELNDTGISSIQHLCKSYRISTAYSSLAIIVARYHLLAHRALELDAETLLSLLEKTDAFRQLARFQQFLLVCEADFHAYSGLNSNPYLQKNRILAALSTAKSISVTALTKQGLEGQILGKKLRQQRIDALSHLIQSS
SIO_010081: DMP02_RS00510
subclass of: SO_0000673
so part of: DMP02_RS00510
location: complement(100103..101278)
location: region:100103-101278:-1
so has part: feature:100103-101278:-1:exon

WP_126322170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100103-101278:-1:exon

DMP02_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00515
old locus tag: RVIR1_01080
so part of: sequence
location: complement(101455..103635)
location: region:101455-103635:-1
so has part: feature:101455-103635:-1:exon
subclass of: SO_0000010

position:101455:-1
position: 101455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103635:-1
position: 103635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101455-103635:-1:exon

DMP02_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00515
old locus tag: RVIR1_01080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSKDLASVWNNLKKIPELKKRNASNTQLNDGTVLPFLVALFKDIYKAYIQCDRNSWNYQISCYNFNGLDTHKAKETLIKQYNDCLYSYSIDKTNPWVIDARDKRFIKIIRKRALENEEKLSIYIDQFLNSELAKKSIPYAKLKKTRQYLYEIATLACFKCCYDNKLLIFENLKYQDAITEFKKLLNEDCRIVQLKISKLKILQKKIANSDLLAVICSENYQKNLAGAATYWEKIESSLNKNTLFKFINTIWNATNSYTTLLRWISFLLIIFSIPFPNFPLILFIAIPSIRYIIFCFTSFTALNKISTFSNVLEIPKKEKILSHIKQEVFNKAQYEKQLSILQNQLLHLDIKIENLYTNLPLQTSKALDTCIEFESSAIYQKLNRVFPKTQFITSLVTKIMSVTLSAYLISWAASIFFNFIGALTLASLISSPLVVGLFILIPTCIFLIRHVIKYQSSKNTYQRTIRTLLKEPCEFSFIDNQGELKTVTLEKWQKFELLRNEIRALELKIKQFRESNQLPQESKKLFLLFNDYLKYNDIYKSNYQDKRQRAIISSSAKIKKFLSRLLSFSVGGFYGFSLGEQIAFESSLGFKNFFSPSPYILFFTPLIIIHGTANFLTYHLNSRQRNLLFFAEHLDSKLQILEYRRKILSYLTAIFKELDSNVINTSCTEKVTDVSTEKQLAYLDLAVKKINSNERRPNCKFFTLPTSSLTPLLINKTDLRPNLTR
SIO_010081: DMP02_RS00515
subclass of: SO_0000673
so part of: DMP02_RS00515
location: complement(101455..103635)
location: region:101455-103635:-1
so has part: feature:101455-103635:-1:exon

WP_126322171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101455-103635:-1:exon

DMP02_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00520
old locus tag: RVIR1_01090
so part of: sequence
location: complement(103743..105665)
location: region:103743-105665:-1
so has part: feature:103743-105665:-1:exon
subclass of: SO_0000010

position:103743:-1
position: 103743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105665:-1
position: 105665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103743-105665:-1:exon

DMP02_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00520
old locus tag: RVIR1_01090
inference: COORDINATES: protein motif:HMM:NF022752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase
translation: MFKKSWLLISSLFFIYSQSWAHELIELKSKVGLFTLNPATLAISLSPIDSSEKIDLTKDDYLFDKVTELKNNSKEAQWNYPNLKMQVKVTVDDEGLKFLLTTNKEQSLQWPNMGLSPLANALIIPEGEGLYIPNHNLFWLKEFKKYPDLSLSMPFWAIQYNVGTISTIMADHDVNTETHVKQKNAQLYLSNTHQFLKRDHFPAYEISIHSTGNSPISPALDYRHLLIEQNKFVSLKQKILENANVNKLLGAFHVWVWGDGKSIDMLRKFDALGIKHLWIGYDATPIKNGFNIDKTYIVTAENMGYLIAPYDSFDNAQNPKTSDSMTSNWPNHLWPKACIRSKNGSLLTGFANRGCYLSAEALRLRESKEKNIAMHLDTMLSKGDNSLFLDCDAAAPLYEDYSKQHPMTRLQDLEDRVERMRYISSTKKLVLGSETGLAWSNAVIAYNNGGFLSFSQAFWPYLKDKKQFGAWWPNTKPTVLFKPYQAPYELMHAAYDPRYRLPLYEAVFHDSVISTDRWELNELKIPTLKKTKALLQNLYNVPPIWVLDKKTLEDNENYFVEYYQFFSPLHQMTGLEPLTEFKWLTTDHLVQQTQLGNRLILTANFSKTTFEGIRPDCIQAQWKEDGSQHLFCPNNYSNKK
SIO_010081: DMP02_RS00520
subclass of: SO_0000673
so part of: DMP02_RS00520
location: complement(103743..105665)
location: region:103743-105665:-1
so has part: feature:103743-105665:-1:exon

WP_126322172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103743-105665:-1:exon

DMP02_RS07285
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07285
old locus tag: RVIR1_01100
pseudo: true
so part of: sequence
location: complement(105761..107224)
location: region:105761-107224:-1
so has part: feature:105761-107224:-1:exon
subclass of: SO_0000010

position:105761:-1
position: 105761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107224:-1
position: 107224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105761-107224:-1:exon

DMP02_RS07285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07285
old locus tag: RVIR1_01100
inference: COORDINATES: protein motif:HMM:NF013646.2
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
SIO_010081: DMP02_RS07285
subclass of: SO_0000673
so part of: DMP02_RS07285
location: complement(105761..107224)
location: region:105761-107224:-1
so has part: feature:105761-107224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105761-107224:-1:exon

DMP02_RS07420
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07420
so part of: sequence
location: complement(107115..107402)
location: region:107115-107402:-1
so has part: feature:107115-107402:-1:exon
subclass of: SO_0000010

position:107115:-1
position: 107115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107402:-1
position: 107402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107115-107402:-1:exon

DMP02_RS07420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07420
inference: COORDINATES: protein motif:HMM:NF013646.2
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
translation: MIHEDGELSGNTAENSSAKSTDVLIIGAGPTGLMMACQLLRFGINFRIIDKQKDRALESRAFAIQAKSMEIFQNLGISAEFLKVARTGMEFAFFY
SIO_010081: DMP02_RS07420
subclass of: SO_0000673
so part of: DMP02_RS07420
location: complement(107115..107402)
location: region:107115-107402:-1
so has part: feature:107115-107402:-1:exon

WP_126322175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107115-107402:-1:exon

DMP02_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: asd
locus tag: DMP02_RS00540
old locus tag: RVIR1_01110
so part of: sequence
location: 107561..108403
location: region:107561-108403:1
so has part: feature:107561-108403:1:exon
subclass of: SO_0000010

position:107561:1
position: 107561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108403:1
position: 108403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107561-108403:1:exon

DMP02_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: asd
locus tag: DMP02_RS00540
old locus tag: RVIR1_01110
EC number: 4.1.1.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597792.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archaetidylserine decarboxylase
translation: MRTLFQSFLPQHGLSRFAGWVAHCKQPWIKNRLIKNFIRDYQVDMSLALKESPNDYSHFNEFFTRALKPEKRPIDSGSEIIVSPVDGCVSQFGDIREGQLLQAKKINYSLQALLGGSMSLASRFQQGKFATFYLSPKDYHRVHSPFVGTLQEMIYVPGRLFSVNTETTEQLSQLFVRNERVICLFSTPIGPMAVILVGAMLVASMSTVWEGVITPAKTRQIRHWHYVENTVSLAKGEELGQFQLGSTVIVLFAANRMQWSDHLALQSKVQFGEGIGRVLS
SIO_010081: DMP02_RS00540
subclass of: SO_0000673
so part of: DMP02_RS00540
location: 107561..108403
location: region:107561-108403:1
so has part: feature:107561-108403:1:exon

WP_126322176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107561-108403:1:exon

DMP02_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00545
old locus tag: RVIR1_01120
so part of: sequence
location: 108476..108691
location: region:108476-108691:1
so has part: feature:108476-108691:1:exon
subclass of: SO_0000010

position:108476:1
position: 108476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108691:1
position: 108691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108476-108691:1:exon

DMP02_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00545
old locus tag: RVIR1_01120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNLQADRLKKDCKDREKAAIFYYVVDLKVNEHEQIKILEFGRGFQSGTSGYNELFGYGRNLPGFFLKAKL
SIO_010081: DMP02_RS00545
subclass of: SO_0000673
so part of: DMP02_RS00545
location: 108476..108691
location: region:108476-108691:1
so has part: feature:108476-108691:1:exon

WP_126322177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108476-108691:1:exon

DMP02_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00550
old locus tag: RVIR1_01130
so part of: sequence
location: 108782..110113
location: region:108782-110113:1
so has part: feature:108782-110113:1:exon
subclass of: SO_0000010

position:108782:1
position: 108782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110113:1
position: 110113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108782-110113:1:exon

DMP02_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00550
old locus tag: RVIR1_01130
inference: COORDINATES: protein motif:HMM:NF024579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNSLTESKHNDFRKLDFYSGIYAGTSIKTAPEHVLALDDDPTLQTILDDKILMHLALPIQAKAYRPKALSFPRQYTSTLAQQICQAIKSDYIVLKIGDSHEGKGVITIQREKLDEILRFLLARDQSELMLRLLPIVANDRFFKLKNRDPLASKAFFSEKIESKLKESYGISMLCYQTWLNSDNPLFLVESYEASKPIKKGNTDYDATMRVLFLILKNEGRYSFQPIGAYWKLPELPMVKKTKKLSCKDHRLSQISSTSKQADLSLEVDPSTLHKVYAHLNLILPIIFKAVQETNYIELIATHLLPAAKDKQECDFFYQMKLANNVGSLGRYEEAISILEVIQKKQPNHYRSYHELAIIYHLQENYEKAITFYTKSLALDPTFAAAYRRRAQSWLALTCYDKARQDIKQALSLAPNDRQTLNVETEIKLKMAPEAVASTSYHFN
SIO_010081: DMP02_RS00550
subclass of: SO_0000673
so part of: DMP02_RS00550
location: 108782..110113
location: region:108782-110113:1
so has part: feature:108782-110113:1:exon

WP_126322178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108782-110113:1:exon

DMP02_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00555
old locus tag: RVIR1_01140
so part of: sequence
location: 110302..110796
location: region:110302-110796:1
so has part: feature:110302-110796:1:exon
subclass of: SO_0000010

position:110302:1
position: 110302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110796:1
position: 110796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110302-110796:1:exon

DMP02_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00555
old locus tag: RVIR1_01140
EC number: 3.1.2.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MITQAAKPVSVSAIHDHTYKIFPNDLNSTETVFGGLIMATLDRVASVVAERHSGKSCVTASVDAMHFLKPAKRGDILIFQASINRSWQTSMEVGVRVLAEDYRTGDRRHMVSAYFTFVATDENGVKTSVPQVIAETEDEKRRYQEAGDRRDRRRQEAEARRSRK
SIO_010081: DMP02_RS00555
subclass of: SO_0000673
so part of: DMP02_RS00555
location: 110302..110796
location: region:110302-110796:1
so has part: feature:110302-110796:1:exon

WP_126322179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110302-110796:1:exon

DMP02_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gloB
locus tag: DMP02_RS00560
old locus tag: RVIR1_01150
so part of: sequence
location: 111014..111790
location: region:111014-111790:1
so has part: feature:111014-111790:1:exon
subclass of: SO_0000010

position:111014:1
position: 111014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111790:1
position: 111790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111014-111790:1:exon

DMP02_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gloB
locus tag: DMP02_RS00560
old locus tag: RVIR1_01150
EC number: 3.1.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035715.1
GO function: GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO process: GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyacylglutathione hydrolase
translation: MAIQVQPILAFKDNYIWCLINDETNHCIIVDPGEAKPVLGFLKRSNLSLDALFITHHHWDHTNGIKAILKDHSAPVFGPAKEKIAGVSNPVDEGDTVELNNWPITFKVLAIPGHTLGHIAYYGDNLLFCGDTLFSAGCGRLFEGTAEQMLDSLNKLSQLPDETQIYCGHEYTLNNLNFAQMLEPNNVHVKEYLERVRELRQKNLPSLPCTLSTERLVNPFLRCDKTEILSRVERHRGKKFDLPAEAFAYLRQWKNNYK
SIO_010081: DMP02_RS00560
subclass of: SO_0000673
so part of: DMP02_RS00560
location: 111014..111790
location: region:111014-111790:1
so has part: feature:111014-111790:1:exon

WP_126322180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111014-111790:1:exon

DMP02_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00565
old locus tag: RVIR1_01160
so part of: sequence
location: 112082..113242
location: region:112082-113242:1
so has part: feature:112082-113242:1:exon
subclass of: SO_0000010

position:112082:1
position: 112082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113242:1
position: 113242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112082-113242:1:exon

DMP02_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00565
old locus tag: RVIR1_01160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNNNNNTNFTRVSDLETFFSGSNWVLEFEDFEVSSQDPVGSGDEVDKGNFKGLYREVEINEDTGEVSRRVIRATKYGRNGDKILEIDLRAVHVGKEKNGELQGAFLLTDPIKNKVNGEKPIEELLIYSHGSISNRGDEGEIVLKKGMPVISFLGPHEAILNIELGCITPYAEVSFEGITLTSEQAKYDFETSGYQAITGAPIRYDAKTGAPLGVIHNYELTKFDSDQLTGDLRHVLDKVTEHMQLQREIAKTCREDGHAYETDPLKLKPGVRFVPLVDTIVIRAKGEMDTSDVIKIAQERGYKKIICNFCRSLAPVSKPHWITNLFLKAGPNKPAPEVYCAKDTKLLEKPIFLSWAEVAKLEYTRIEAAKHEAELLSSFAPRMSR
SIO_010081: DMP02_RS00565
subclass of: SO_0000673
so part of: DMP02_RS00565
location: 112082..113242
location: region:112082-113242:1
so has part: feature:112082-113242:1:exon

WP_126322181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112082-113242:1:exon

DMP02_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00570
old locus tag: RVIR1_01170
so part of: sequence
location: 113383..113748
location: region:113383-113748:1
so has part: feature:113383-113748:1:exon
subclass of: SO_0000010

position:113383:1
position: 113383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113748:1
position: 113748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113383-113748:1:exon

DMP02_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00570
old locus tag: RVIR1_01170
inference: COORDINATES: protein motif:HMM:TIGR00526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MHCQLLLEDIRLDVKLGHSEEERSALQRVLVQVTFGFETIPLVCSTDNLHDTLCYATLVDELQTFCDDRSFKLIEALGYQLYQFIQEKVVATRPEKMTVALRVIKNPPLSTLEQASFSICD
SIO_010081: DMP02_RS00570
subclass of: SO_0000673
so part of: DMP02_RS00570
location: 113383..113748
location: region:113383-113748:1
so has part: feature:113383-113748:1:exon

WP_126322182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113383-113748:1:exon

DMP02_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mutS
locus tag: DMP02_RS00575
old locus tag: RVIR1_01180
so part of: sequence
location: 113845..116433
location: region:113845-116433:1
so has part: feature:113845-116433:1:exon
subclass of: SO_0000010

position:113845:1
position: 113845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116433:1
position: 116433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113845-116433:1:exon

DMP02_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mutS
locus tag: DMP02_RS00575
old locus tag: RVIR1_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035962.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair protein MutS
translation: MKHTIDLSQHTPMMRQYLSIKANYADKLLFYRMGDFYELFYDDAIKAAELLNITLTKRGQSNGQAIPMAGVPFHSVESYLAKLVKQGESVAICEQVSDPISGKGPMERRVTRIITPGTLSDEALLEARQTNFLLALSHKADQFGLAYLDMSSGQFHILQVNNQEALVSELARLSPIELLIDEAFQLDILLSPYKTIRRRPSWEFDLTAATHCLTQQFQTRDLSGFDCQDLPLAIQAAGCLLSYAKATQQTNLFHLQPLRVYRREESVILDATTRRNLELTTNLQGGKSNTLMSIMDKTATPMGGRLLHRWVHSPLLNFGLIQARQTAIQCLLNTQAYLGLHNVLQGIGDIERIIARVGLKSARPRDLEQLRSALASLPDIHNKLGCLPVIKNTSDDLLVSLRNNIKIFPSLFSLLQRAIVENPPVMIREGGVIAKNYHSELDELQTLSENTGQYLVDLEKREREQSGISTLKVGFNRVHGYYIEISRGQAKQVPNHYIRRQTLTNAERFITPELKEFEDKALSARSKALSLEKRLYEELLDKLLVYLTDLQQTANALAQLDVLTCLAERAATLKLVCPHLSADSGIHIKGGRHLVIEQAIDVPFVANDNELTAQKRLLIITGPNMGGKSTYMRQTALICLLAMTGSFVPADSVLIGPLDRIFTRIGAADDLAGGRSTFMVEMTETASILHNATEQSLVIMDEIGRGTSTFDGLALAFACAEYLAKEIKSYTLFATHYFELTELAEKIAGIANCHLTAMEYQDKIVFLYTVNEGPANKSYGLHVAQLAGVPNPVIKRAKEKLLSLEKQAHLLQKPLFSVPPVPEKIMVSPVLELLEHIEPDHLAPKEALEILYRLKSLQGINV
SIO_010081: DMP02_RS00575
subclass of: SO_0000673
so part of: DMP02_RS00575
location: 113845..116433
location: region:113845-116433:1
so has part: feature:113845-116433:1:exon

WP_126322183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113845-116433:1:exon

DMP02_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pssA
locus tag: DMP02_RS00580
old locus tag: RVIR1_01190
so part of: sequence
location: 116430..117287
location: region:116430-117287:1
so has part: feature:116430-117287:1:exon
subclass of: SO_0000010

position:116430:1
position: 116430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117287:1
position: 117287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116430-117287:1:exon

DMP02_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pssA
locus tag: DMP02_RS00580
old locus tag: RVIR1_01190
EC number: 2.7.8.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005769410.1
GO function: GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol--serine O-phosphatidyltransferase
translation: MNKEIFDPNDGFFAFNQSDQAIPRVETDKNTDNENGEGSRQTIYRRRGIYLLPNLFTIAGLFAGFYAIVSAMEGYFSNAAISIFIAMIMDFFDGRVARLTNTQSAFGAELDSLSDMVSFGVAPALVVYSWSLESLGKLGWLAAFVFAAAGALRLARFNTQALVMDKRYFQGLPIPAAAGILASMVWLSVDSGIPGEVVDMTAAVLAILTAILMVSNIRYYSFKEIDLKGRVPFVAILLVVLAFVGISLDPPKILFLLFFCYGISGPILTLWALHKKRSQRKKQHH
SIO_010081: DMP02_RS00580
subclass of: SO_0000673
so part of: DMP02_RS00580
location: 116430..117287
location: region:116430-117287:1
so has part: feature:116430-117287:1:exon

WP_126322184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116430-117287:1:exon

DMP02_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: trpS
locus tag: DMP02_RS00585
old locus tag: RVIR1_01200
so part of: sequence
location: complement(117369..118466)
location: region:117369-118466:-1
so has part: feature:117369-118466:-1:exon
subclass of: SO_0000010

position:117369:-1
position: 117369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118466:-1
position: 118466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117369-118466:-1:exon

DMP02_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: trpS
locus tag: DMP02_RS00585
old locus tag: RVIR1_01200
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035831.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MNHPKPRLLSGDTPTGKLHLGHWVGSLETRLALQESYECYFIIANVHAFTTRAEHPTEIRQNTLDIALDYLAVGFDPKQSSIFIQSEVPAIAELTWFFSMLLSFPRVMRNPTIKDEIRNKNLGDNYPFGFLLYPVGQIADVLAFRPELVPVGEDQVAHLEMARECARRFNQLYCGVDPQTEDKDYVAKGGLFPIIQPKLSRVKRLVGTGAPNSDGVLPKMSKSLNNAIYLSDDADSIAKKIRGMYTDPKRLRASDPGSTENNPLWIFHEAFNPDKKWVEEAEIQYRQGQIGDKVCKEKLVEILVALTQPMRERRRLYENDPGEVLKILQQGTEQANELAEDTLIKAKTAMKQDYFKRQLKLSSLP
SIO_010081: DMP02_RS00585
subclass of: SO_0000673
so part of: DMP02_RS00585
location: complement(117369..118466)
location: region:117369-118466:-1
so has part: feature:117369-118466:-1:exon

WP_126322185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117369-118466:-1:exon

DMP02_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00590
old locus tag: RVIR1_01220
so part of: sequence
location: 118596..119540
location: region:118596-119540:1
so has part: feature:118596-119540:1:exon
subclass of: SO_0000010

position:118596:1
position: 118596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119540:1
position: 119540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118596-119540:1:exon

DMP02_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00590
old locus tag: RVIR1_01220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPSNRLAKKINIVDPLNGVYGYFNDPNFYNESKEDGSTFKVDFPRTSEIELIINGESQIHHKISDSEVDKTNNQNEFIDLLMKQRPELARVIMQELNQSGALFTARILMEGYFFRRAAIESKDKHHHFIIDVANQDEVFVKETIIYRSLSLEPTETALNIIASGNSLEVHGFFSEEEQKKLESYRNSRRVQSKLRSKDDDGAQELVLSEGQPLSLTVQYALRYCEKTGTYEMKVPSKDDITLTVPTELAKRLVFDNKWTIGDKISEFIFKLVDVFKKLVIAKVSERTVTEQSRPDQAKPSEESQASSFAQRM
SIO_010081: DMP02_RS00590
subclass of: SO_0000673
so part of: DMP02_RS00590
location: 118596..119540
location: region:118596-119540:1
so has part: feature:118596-119540:1:exon

WP_126322186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118596-119540:1:exon

DMP02_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00595
old locus tag: RVIR1_01230
so part of: sequence
location: 119614..121185
location: region:119614-121185:1
so has part: feature:119614-121185:1:exon
subclass of: SO_0000010

position:119614:1
position: 119614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121185:1
position: 121185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119614-121185:1:exon

DMP02_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00595
old locus tag: RVIR1_01230
EC number: 4.1.1.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597779.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase
translation: MSSSLDAGTLVSGKSYVDLTVEQLINFAIERKEGVIAANGALSVSTGERTGRSPKDKFIVQEAKTEKDIDWGPVNQPIAEEHFHALWQRAESYAKEVDLFISNLQVGADPDYYLPVKVITQYAWHNLFARQLFIRPENFHGKANKAEWTILSLPGLKTDPRCDGVHSDATLMLHLSERKVLLCGHRYAGEIKKAMFSVLNYLLPASDVLPMHCSANVGKQGDVALFFGLSGTGKTTLSADPERYLIGDDEHGWSENSVFNFEGGCYAKCIDLSKEREPVIWNAIRHGAVMENVVLDPHTLEPDYKDASLTQNTRVAYPLDFISLRVPENRVEQLPSAVIFLTCDLYGVLPPVARLSHEQAAYYFLSGYTALVGSTEVGQTEAIKTTFSTCFGAPFFPRPAKVYAELLIKRLKNSDANVYLVNTGWTGGAYGQGRRFPIPVTRAIIQAILSDEMKTAEYTTLPGFNFAIPKNLKDIDACLLDPRQTWDDIAAYDYKTKELIAKFIDNFKKFEVSKEIRDAGPVL
SIO_010081: DMP02_RS00595
subclass of: SO_0000673
so part of: DMP02_RS00595
location: 119614..121185
location: region:119614-121185:1
so has part: feature:119614-121185:1:exon

WP_126322187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119614-121185:1:exon

DMP02_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: proC
locus tag: DMP02_RS00600
old locus tag: RVIR1_01240
so part of: sequence
location: complement(121244..122101)
location: region:121244-122101:-1
so has part: feature:121244-122101:-1:exon
subclass of: SO_0000010

position:121244:-1
position: 121244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122101:-1
position: 122101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121244-122101:-1:exon

DMP02_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: proC
locus tag: DMP02_RS00600
old locus tag: RVIR1_01240
EC number: 1.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005769923.1
GO function: GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrroline-5-carboxylate reductase
translation: MNSNTVENSSTKNIAFIGAGNMANSLIRGLLNNGYDANNIWASNTNVTLLDHLKKLKIHTSTDNRLVANAADVLVLAVKPQILKEVATEMADLIREKKPLIISLAVGINLKTIHNYLQDASISIIRCMPNTPALLGSGTTGLFPNRHCSSIQKDAAEALFRSVGIVVWCKQEEEIDIVAALSGSGPAYFFLLIEALQNAGTELGLSKETASLLSQKTALGAARMAIESEGKESIEQLRQNVTSRGGTTQAALNVLEQANFRELIKKAMLAAKQRAEALAEEFENQ
SIO_010081: DMP02_RS00600
subclass of: SO_0000673
so part of: DMP02_RS00600
location: complement(121244..122101)
location: region:121244-122101:-1
so has part: feature:121244-122101:-1:exon

WP_232019577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121244-122101:-1:exon

DMP02_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00605
old locus tag: RVIR1_01250
so part of: sequence
location: complement(122117..122794)
location: region:122117-122794:-1
so has part: feature:122117-122794:-1:exon
subclass of: SO_0000010

position:122117:-1
position: 122117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122794:-1
position: 122794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122117-122794:-1:exon

DMP02_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00605
old locus tag: RVIR1_01250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MKAMILAAGRGSRMRPLTDEIPKPLLPIANKPFIVHQLLKLADAGLKDIVINVSYRAKQIIDALGNGHHYGVNLEYSFEPSALETGGGICQALPFLGEDPFLVISADIWTEYPLEKLSQHKLGSAQAHLILVDNPNFHPKGDFHLLPNKLLDLNGFPKFTFANLGIYHPDLFKDCKPQTFPLSDIFHKRINEKKITGEHYRGSWFNVGTLSELTRLDSYLKQENK
SIO_010081: DMP02_RS00605
subclass of: SO_0000673
so part of: DMP02_RS00605
location: complement(122117..122794)
location: region:122117-122794:-1
so has part: feature:122117-122794:-1:exon

WP_126322188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122117-122794:-1:exon

DMP02_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00610
old locus tag: RVIR1_01260
so part of: sequence
location: complement(122799..123797)
location: region:122799-123797:-1
so has part: feature:122799-123797:-1:exon
subclass of: SO_0000010

position:122799:-1
position: 122799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123797:-1
position: 123797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122799-123797:-1:exon

DMP02_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00610
old locus tag: RVIR1_01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphotransferase
translation: MPTATNKLNTLKSWLETACSLRDFELQPLVNEASFRQYFRVQMNNNSHIVMFAPPDKEDITAFISIAKDFTGQGINAPEILNYHLEQGLILLSDLGNDLYLNLLNTETADGLYTRALAVIPQIQACEPKLANHQPLGLFDEKFIRTELNLFPDWFLSKHLKLNITAQFSASLEKIFQLLITSALKQPRVCVHRDYHSRNLLLIDKKKVGILDFQDAIYGPITYDAVSLLRDAYIDWPEPHVEKWALNFRDMLLPKHSLSSEEFIRWFDLIGVQRHLKVLGIFARLCYRDNKPQYLASTDRLLRYLQQVCEKYPELIELKHLLPNIHNKLSET
SIO_010081: DMP02_RS00610
subclass of: SO_0000673
so part of: DMP02_RS00610
location: complement(122799..123797)
location: region:122799-123797:-1
so has part: feature:122799-123797:-1:exon

WP_126322189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122799-123797:-1:exon

DMP02_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dapA
locus tag: DMP02_RS00615
old locus tag: RVIR1_01270
so part of: sequence
location: 124005..124880
location: region:124005-124880:1
so has part: feature:124005-124880:1:exon
subclass of: SO_0000010

position:124005:1
position: 124005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124880:1
position: 124880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124005-124880:1:exon

DMP02_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dapA
locus tag: DMP02_RS00615
old locus tag: RVIR1_01270
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034661.1
GO function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate synthase
translation: MFHGSMVALLTPMRENGDIDYLCLRHLVDWHVAQGTDAILVMGTTGEPATLSAEEKENVIKTVVEQVHGRIPVIAGTGTNSTQSSIDQTRKAMEIGVQACLLVTPYYNCPTQEGLYQHYRSIAEKVPIPQILYNIPKRTGVDLLPETVSRLAGIANIVGIKEGRPACAKAIIEYCGTNIDIYSGDDNAALEIIRLGGKGVVSVLANLLPKAVHELCETARNADWDKEEALEQQLRPFYGDLFVETNPIPVKWLAAEHKLIPTPHLRLPLTTLSSEQQTNLKPLLNRLTTFT
SIO_010081: DMP02_RS00615
subclass of: SO_0000673
so part of: DMP02_RS00615
location: 124005..124880
location: region:124005-124880:1
so has part: feature:124005-124880:1:exon

WP_126322190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124005-124880:1:exon

DMP02_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00620
old locus tag: RVIR1_01290
so part of: sequence
location: 125281..125371
location: region:125281-125371:1
so has part: feature:125281-125371:1:exon
subclass of: SO_0000663

position:125281:1
position: 125281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125371:1
position: 125371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125281-125371:1:exon

DMP02_RS00620
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS00620
old locus tag: RVIR1_01290
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:125316..125318,aa:Ser,seq:cga)
SIO_010081: DMP02_RS00620
subclass of: SO_0000673
so part of: DMP02_RS00620
location: 125281..125371
location: region:125281-125371:1
so has part: feature:125281-125371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125281-125371:1:exon

DMP02_RS07290
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07290
so part of: sequence
location: complement(125386..125727)
location: region:125386-125727:-1
so has part: feature:125386-125727:-1:exon
subclass of: SO_0000010

position:125386:-1
position: 125386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125727:-1
position: 125727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125386-125727:-1:exon

DMP02_RS07290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07290
inference: COORDINATES: protein motif:HMM:TIGR02258.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2'-5' RNA ligase family protein
translation: MLLHNIRFFPSPTAPRAIAADIIPTAELFELAYYLEEVARSLGFSPETKPYLPHLTLGRIVHHHTSNIREELKLNASAMLVDKIVLFDSKKTEYNQIYTSLASIPFQTATATV
SIO_010081: DMP02_RS07290
subclass of: SO_0000673
so part of: DMP02_RS07290
location: complement(125386..125727)
location: region:125386-125727:-1
so has part: feature:125386-125727:-1:exon

WP_232019648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125386-125727:-1:exon

DMP02_RS07295
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07295
so part of: sequence
location: complement(125622..125966)
location: region:125622-125966:-1
so has part: feature:125622-125966:-1:exon
subclass of: SO_0000010

position:125622:-1
position: 125622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125966:-1
position: 125966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125622-125966:-1:exon

DMP02_RS07295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07295
inference: COORDINATES: protein motif:HMM:NF014849.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2'-5' RNA ligase family protein
translation: MSTHDPLRLFFAIELNKELRDALSKLIDELKHEPWGNRVRWVHPDNLHVTLRFLGPAEPSLIAALAEGTHKAIKKLSLFYCYYIIFVSSRPPRHLVLLRLISFLLRSFLSWPIT
SIO_010081: DMP02_RS07295
subclass of: SO_0000673
so part of: DMP02_RS07295
location: complement(125622..125966)
location: region:125622-125966:-1
so has part: feature:125622-125966:-1:exon

WP_232019578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125622-125966:-1:exon

DMP02_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00630
old locus tag: RVIR1_01310
so part of: sequence
location: 126267..127646
location: region:126267-127646:1
so has part: feature:126267-127646:1:exon
subclass of: SO_0000010

position:126267:1
position: 126267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127646:1
position: 127646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126267-127646:1:exon

DMP02_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00630
old locus tag: RVIR1_01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome ubiquinol oxidase subunit I
translation: MIIDTTLLSRAQFGFTIGFHILFPTLNIGLALFLSIMEGLWLKTGKPVYLKICQFWTKIFALTFGMGVVSGIVLAYELGTNFGPFIHIAGGVLGALFAYEVLSAFFLEAGFLGVMLFGWDKVSPKLHYTATLLVMLGTTISAFWILAANSWMQTPAGFHVEAGKYVVDNWWAVIFNPSMLPSFFHMLMASYLTTCFAVAGVSAWYLLKQQHIELAKTCFSFALGAAIILAPVQILLGDMVGLKVQKYQPLKTAAIEANWQTQKGAPLILFAIPDVKHAKNLYEISIPKLASLINTHHWDGTLIGLKSVPAKDRPVIESTFWMFRVMVGIGLLFFLVALIALWLTIRGRLFHYRSFYRFCVAIAPLGFLSTIAGWVTTESGRQPWIAYHLIRTSQGASTVPMHQVVISLILLVTVYGIVFSFYLFYLFKVIRKGPAPLPHESITDVITESPFKYMAPEVK
SIO_010081: DMP02_RS00630
subclass of: SO_0000673
so part of: DMP02_RS00630
location: 126267..127646
location: region:126267-127646:1
so has part: feature:126267-127646:1:exon

WP_126322191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126267-127646:1:exon

DMP02_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: cydB
locus tag: DMP02_RS00635
old locus tag: RVIR1_01320
so part of: sequence
location: 127647..128642
location: region:127647-128642:1
so has part: feature:127647-128642:1:exon
subclass of: SO_0000010

position:127647:1
position: 127647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128642:1
position: 128642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127647-128642:1:exon

DMP02_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: cydB
locus tag: DMP02_RS00635
old locus tag: RVIR1_01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035947.1
GO function: GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome d ubiquinol oxidase subunit II
translation: MLLILTWAVIISFIIMMYVLLDGFDLGIGILFPWIKHGQYRDIMMSTVLPVWDGNETWLVFGAAALYGAFPLAYSVLLPTLYIPIMILLVSLIFRGVAFEFRFKAQRSQFVWDIAFAAGSTVAAFIQGVILGTFVKGYGSHLPLSHAAYQWLTPFSVFTGLAVVCGYALLGATWLIVKTEGKLQDQLYKAAKILLGLVTFFLVGVSFWTPFIEPRVVKIWFTAPKFYYLSVLPLLTLVMVLYNFYCLYNRKKERAPFVLTMGLFICSYIGFCISAWPYIIPHAVSVWDAAAAPSTLKFTLVGTAILLPILLIYTLYSYHVFRGKVKEFIHY
SIO_010081: DMP02_RS00635
subclass of: SO_0000673
so part of: DMP02_RS00635
location: 127647..128642
location: region:127647-128642:1
so has part: feature:127647-128642:1:exon

WP_126322192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127647-128642:1:exon

DMP02_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00640
old locus tag: RVIR1_01330
so part of: sequence
location: complement(128833..129909)
location: region:128833-129909:-1
so has part: feature:128833-129909:-1:exon
subclass of: SO_0000010

position:128833:-1
position: 128833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129909:-1
position: 129909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128833-129909:-1:exon

DMP02_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00640
old locus tag: RVIR1_01330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDEETVKINESILTLLDDIKIYLSAVQRHPLDEIYAKIPAALLQTNVNNVKLEFVPPRSLALNCALEDLNTTLKKETLGIFGLSLDEFLNSIKAIQDTNSNITLKEAIEKTITASHKRFSEDQLSLVTLLYTQLYEKVRLLNPTNSKEEIFARLNNRFHNHFKNTSGDDSNKLTSAYYDFINAYQGKKAGFFSIFGNEKDDLAPYNITKKLIENSNSELTAYLNIIHTIKKIPAYLRDQSAASHLTDMLKHQSNLYFSTLLKINSSESTEETKRDARMKAFQDFRANSSRQIENYKENHPEESTRAKIFLNKLLWFITKLIPFVNKEKIMMFRDPEKASSLLLENIDRETTRIAPAA
SIO_010081: DMP02_RS00640
subclass of: SO_0000673
so part of: DMP02_RS00640
location: complement(128833..129909)
location: region:128833-129909:-1
so has part: feature:128833-129909:-1:exon

WP_126322193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128833-129909:-1:exon

DMP02_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: def
locus tag: DMP02_RS00645
old locus tag: RVIR1_01340
so part of: sequence
location: 130125..130634
location: region:130125-130634:1
so has part: feature:130125-130634:1:exon
subclass of: SO_0000010

position:130125:1
position: 130125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130634:1
position: 130634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130125-130634:1:exon

DMP02_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: def
locus tag: DMP02_RS00645
old locus tag: RVIR1_01340
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000114998.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MAIRSIIHLPDPRLRAPTEAITLFDAALQQLIDDMFETMYAAKGIGLAAPQIAINQKLAVIDVSNDKSSTLCLINPKIVESRGEALMEEGCLSVPGVYDKAPRALWVKLSALDRHGKPYELEAEDLLAHCIQHEVDHLNGKLFLDYLSPLKRQLARKKLEKIKKRQGNA
SIO_010081: DMP02_RS00645
subclass of: SO_0000673
so part of: DMP02_RS00645
location: 130125..130634
location: region:130125-130634:1
so has part: feature:130125-130634:1:exon

WP_126322194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130125-130634:1:exon

DMP02_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: fmt
locus tag: DMP02_RS00650
old locus tag: RVIR1_01350
so part of: sequence
location: 130631..131578
location: region:130631-131578:1
so has part: feature:130631-131578:1:exon
subclass of: SO_0000010

position:130631:1
position: 130631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131578:1
position: 131578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130631-131578:1:exon

DMP02_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: fmt
locus tag: DMP02_RS00650
old locus tag: RVIR1_01350
EC number: 2.1.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035318.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MNIIFAGTPEFALPSLQALLELGHQVVAVYTQPDRPKGRGRHLLMSPIKQLALEKNLPVCQPITLRNVDEQKKLAAWKADLMVVVAYGLILPQAVLAIPPLGCINVHASLLPRWRGAAPIQRAILAGDEETGISIMQMDEGLDTGQVLQEVSCKIEQADTSQTLQDRLAKLGAQALVTSLNNIEQGNYQLKPQDNHGSTYAKKIDKAEAEIDWSQNADVIARMIRAFNPKPVAYTFLGALLLRIWSAKVLDQASNNPPGTILQVGEQGIDVMTGRGSLRLLQLQLPGGRCLPASALLHSKSHLFNVGALLGQKHE
SIO_010081: DMP02_RS00650
subclass of: SO_0000673
so part of: DMP02_RS00650
location: 130631..131578
location: region:130631-131578:1
so has part: feature:130631-131578:1:exon

WP_126322195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130631-131578:1:exon

DMP02_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsmB
locus tag: DMP02_RS00655
old locus tag: RVIR1_01360
so part of: sequence
location: 131571..132872
location: region:131571-132872:1
so has part: feature:131571-132872:1:exon
subclass of: SO_0000010

position:131571:1
position: 131571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132872:1
position: 132872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131571-132872:1:exon

DMP02_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsmB
locus tag: DMP02_RS00655
old locus tag: RVIR1_01360
EC number: 2.1.1.176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597763.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
translation: MNNPRALAAQIIARVLGGDSLTEAFAEGIPNTVESRDRGFIQELCYGVIRWYEPLRQVCSYLLKKPLNANDRDIYGLLLIGLYQFIYLKTAAHAAVHETVQAAKDLKKNWAAALINGVLRSFQRQQTGLLKKLPKEAHYAHPRWLMKKLRQAWPKDWQGIIEANNQAPPMSLRINRLKISRDDYLPKLQAKALEATLSALSDVGIILNETCNVYGLPGFSEGEVSIQDTAAQLAAFLLMLEPKQSVLDACAAPGGKFAHILETQPDLQTAVALDQDKTRLSKVEENLSRLRLMRDGVKLVCIKAQTFKASWQGEQFDRILLDAPCSGTGVIRRHPDIKLLRREEDIDKLAQQQLELLFSLWPLLKPGGILLYATCSVLPEENQSVLQRFLLQQSDAHEHMIDEKWGTACEVGRQIFPQIHGTDGFYYARLQKK
SIO_010081: DMP02_RS00655
subclass of: SO_0000673
so part of: DMP02_RS00655
location: 131571..132872
location: region:131571-132872:1
so has part: feature:131571-132872:1:exon

WP_126322196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131571-132872:1:exon

DMP02_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00660
old locus tag: RVIR1_01370
so part of: sequence
location: 132905..133438
location: region:132905-133438:1
so has part: feature:132905-133438:1:exon
subclass of: SO_0000010

position:132905:1
position: 132905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133438:1
position: 133438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132905-133438:1:exon

DMP02_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00660
old locus tag: RVIR1_01370
inference: COORDINATES: protein motif:HMM:NF012894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MIKIKSSCFCGLMLLNLFLLSACATTSTQQNDSLHAAKIEKNKPSAKKKKQLPPALIQVIQSPDRLRVVLYSDVCFQSNGRLTMECSKQLLGAMKTMKQYGDGAIQVVGYTDDIYDPQTANELSQRQADAVVAFLWSHGIGSRRLQATGFGSHDPIASNRSVKASAANRRVEITLVK
SIO_010081: DMP02_RS00660
subclass of: SO_0000673
so part of: DMP02_RS00660
location: 132905..133438
location: region:132905-133438:1
so has part: feature:132905-133438:1:exon

WP_172593945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132905-133438:1:exon

DMP02_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00665
old locus tag: RVIR1_01380
so part of: sequence
location: complement(133530..134429)
location: region:133530-134429:-1
so has part: feature:133530-134429:-1:exon
subclass of: SO_0000010

position:133530:-1
position: 133530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134429:-1
position: 134429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133530-134429:-1:exon

DMP02_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00665
old locus tag: RVIR1_01380
inference: COORDINATES: protein motif:HMM:NF022441.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2807 domain-containing protein
translation: MKPLIYCLLPILSYFSMPVTAQTLSTPLVRKNVVVPAFSALAIQGPVNVTIDTSQTNPSIPALQIFGDPKTVSAVTWKIKNHTLYLDTKWTYRPHRGDRLTIKVNTTPAQLTQIEFNSNGRLVGQGLTGSLSLISRGNGSITLCTNKLDLKSLVTHGENNISLYHINSTDLTIQGENAGKIKIEGNVALHAINLTGNGTLLAHWVNSPYVKINASGKEKIFLAGVTNTLDAHLSEKSQLFAKQLRAENGFVETKNQAHAKVTVKQKLSALAQDNSTIYYSKSVEFLNTFTKNAGLVLSN
SIO_010081: DMP02_RS00665
subclass of: SO_0000673
so part of: DMP02_RS00665
location: complement(133530..134429)
location: region:133530-134429:-1
so has part: feature:133530-134429:-1:exon

WP_126322198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133530-134429:-1:exon

DMP02_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: argS
locus tag: DMP02_RS00670
old locus tag: RVIR1_01390
so part of: sequence
location: 134600..136360
location: region:134600-136360:1
so has part: feature:134600-136360:1:exon
subclass of: SO_0000010

position:134600:1
position: 134600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136360:1
position: 136360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134600-136360:1:exon

DMP02_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: argS
locus tag: DMP02_RS00670
old locus tag: RVIR1_01390
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035040.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MKPIIQQEIKTALAAAEVSSLSSLTIQVDYARDKLHGDFSSNIALLLAKSLKKQPCQLAEQIAAHIDCSKATSIIEKVEIAGPGFINFFLKKTAWYPIIDRVLTQAEHFGVSDIGKDEPLLVEFVSANPTGPLHVGHGRGAAYGDSLVRLLKTVGYQAHAEYYVNDAGRQMDILATSVWLRYLEACEEKFVFPSNAYRGAYIHGIVEQLLKKYGKQFYKPALSVFADIPADEPQGGDKEVYIDALILKAKALLGADDYQKLFDMSLNAILDDIKEDLTGFRVNFDNWFSENSLFKTGVVDKTIERLKKNGHTYEASGALWFKSTVFGDDKDRVLIRENGQATYFAADAAYRLSILEDRGFKKIVNILGSDHHGYIARILAVIQALGYPAASLTALLVQFAVLYRGDKKIQMSTRSGEFVTLRELREEVGSDAARFFYVLRRAEQHMDFDLDLAKEQSNANPVYYVQYAYARICSVMRQLKVKQLNWDKAIGTDSLAQLKEEQEIDLLVLLNRYPEMLEQAANNYEPHQIAHYLRDLAQVFHAYYNQHVFLVEAEDLRNARLNLIAATQQVIKNGLDLLGVETMEVM
SIO_010081: DMP02_RS00670
subclass of: SO_0000673
so part of: DMP02_RS00670
location: 134600..136360
location: region:134600-136360:1
so has part: feature:134600-136360:1:exon

WP_126322199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134600-136360:1:exon

DMP02_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00675
old locus tag: RVIR1_01400
so part of: sequence
location: 136360..137013
location: region:136360-137013:1
so has part: feature:136360-137013:1:exon
subclass of: SO_0000010

position:137013:1
position: 137013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136360-137013:1:exon

DMP02_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00675
old locus tag: RVIR1_01400
inference: COORDINATES: protein motif:HMM:NF016895.2
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MAKDYAKYATYQKVRANRSRFWAVLGLVLVLFALALGLFFFKAHNKQQIAQQAEDKLKQKILEAPAPKPPEPKFDFYNILPQGNLTLSSPSPEAVSTMTEEASVSSSLKKPLDGLLSTTPEQVAIAEAKKQLDQEMSQISNEAYSLILGNFQDVSQAEQYQAQALLKGFPVQSKVVNVDGGVSYQLFMGPYTLAIASQQQKHLNAAGMQAALLKVKP
SIO_010081: DMP02_RS00675
subclass of: SO_0000673
so part of: DMP02_RS00675
location: 136360..137013
location: region:136360-137013:1
so has part: feature:136360-137013:1:exon

WP_126322200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136360-137013:1:exon

DMP02_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hslV
locus tag: DMP02_RS00680
old locus tag: RVIR1_01410
so part of: sequence
location: 137126..137683
location: region:137126-137683:1
so has part: feature:137126-137683:1:exon
subclass of: SO_0000010

position:137126:1
position: 137126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137683:1
position: 137683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137126-137683:1:exon

DMP02_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hslV
locus tag: DMP02_RS00680
old locus tag: RVIR1_01410
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035209.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MQALHGTTILLVRRKDKVVIGGDGQVTLGNAIVLKGNARKVRKLFNDHVLVGFAGATADAFTLLDLFEKKLHKHQGNLERASLELAKDWRSDRVLRRLEAMLAVADKKESFLLSGTGDVIRPEHDSIAIGSGGAYAQSAALALLQNTKLSARDIVERSLKIAADICVFTNHQRTIEEIDSTSTKK
SIO_010081: DMP02_RS00680
subclass of: SO_0000673
so part of: DMP02_RS00680
location: 137126..137683
location: region:137126-137683:1
so has part: feature:137126-137683:1:exon

WP_126322201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137126-137683:1:exon

DMP02_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hslU
locus tag: DMP02_RS00685
old locus tag: RVIR1_01420
so part of: sequence
location: 137870..139204
location: region:137870-139204:1
so has part: feature:137870-139204:1:exon
subclass of: SO_0000010

position:137870:1
position: 137870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139204:1
position: 139204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137870-139204:1:exon

DMP02_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hslU
locus tag: DMP02_RS00685
old locus tag: RVIR1_01420
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011213230.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease ATPase subunit HslU
translation: MDMTPNQIVQELNRYIIGQNDAKRAIAIALRNRKRRMLLTPELRDEVTPKNILMIGPSGVGKTEIGRRAAKITACPFLKVEATKFTEVGYIGRDVDSIPRDLVDSAFKHLREEEITRLQPQVLEAAENKVLDFFVPSVRTTDTDVGELKKKEKSVARRVFRQKLREGSLDDKEIDIELAALPVGVEIMGPPGMEEMTSQLQNMLQNIGTSRSKTRRMKVKDALPAIQKEEAGKLLNEEEIKRRAIEWVEQYGIVFIDEIDKVCRRGEMNGADVSREGVQRDLLPLIEGCTVSTKYGMVRTDHILFIAAGAFHLAKPSDLVPELQGRLPIRVELKALTAEDFELILAKPQTSLIAQYKALLHTEELLLNFEASAIKRIAEVSYEVNEKTENIGARRLYTVMERLLEEISFGATDYKDKSINIDVAYVNQHLADLANDEDRSHYIL
SIO_010081: DMP02_RS00685
subclass of: SO_0000673
so part of: DMP02_RS00685
location: 137870..139204
location: region:137870-139204:1
so has part: feature:137870-139204:1:exon

WP_126323461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137870-139204:1:exon

DMP02_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00690
old locus tag: RVIR1_01430
so part of: sequence
location: 139208..139570
location: region:139208-139570:1
so has part: feature:139208-139570:1:exon
subclass of: SO_0000010

position:139208:1
position: 139208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139570:1
position: 139570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139208-139570:1:exon

DMP02_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00690
old locus tag: RVIR1_01430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF971 domain-containing protein
translation: MNSPTPIDIKLLQKTKVVEIQFDNGEKFVLPCEYLRVFSPSADVKGHGQSEGKLVPGKKEINIINIEPVGHYAVKLLFDDGHNTGLYTWETLYDLAVHQEIYWQRYLQRLEVANEKRESR
SIO_010081: DMP02_RS00690
subclass of: SO_0000673
so part of: DMP02_RS00690
location: 139208..139570
location: region:139208-139570:1
so has part: feature:139208-139570:1:exon

WP_126322202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139208-139570:1:exon

DMP02_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00695
old locus tag: RVIR1_01440
so part of: sequence
location: complement(139600..139887)
location: region:139600-139887:-1
so has part: feature:139600-139887:-1:exon
subclass of: SO_0000010

position:139600:-1
position: 139600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139887:-1
position: 139887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139600-139887:-1:exon

DMP02_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00695
old locus tag: RVIR1_01440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVETAVFDTLAYANRLKKVGVPETQAETHAQLLSEAVVSKVITSQYLDTKLAEVMAKIDVRVAELKTKLIRWVLGAAIAQTSIILSCMKLIKLIH
SIO_010081: DMP02_RS00695
subclass of: SO_0000673
so part of: DMP02_RS00695
location: complement(139600..139887)
location: region:139600-139887:-1
so has part: feature:139600-139887:-1:exon

WP_126322203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139600-139887:-1:exon

DMP02_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: tyrS
locus tag: DMP02_RS00700
old locus tag: RVIR1_01450
so part of: sequence
location: complement(139946..141163)
location: region:139946-141163:-1
so has part: feature:139946-141163:-1:exon
subclass of: SO_0000010

position:139946:-1
position: 139946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141163:-1
position: 141163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139946-141163:-1:exon

DMP02_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: tyrS
locus tag: DMP02_RS00700
old locus tag: RVIR1_01450
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015444785.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MTTDALGIIQRGTTEILVEDELKKKLALGKPLQIKAGFDPTAPDLHLGHTVLINKMRQLQDLGHEVVFLIGDFTGLIGDPSGKSTTRPPLTVEEVAANAKTYQQQFNKILDSTKTQLRFNSEWLSKLSVTELIKLASTYTVARMLERDDFHKRYHNHQAIAIHEFLYPLLQGYDSVVLKTDIELGGNDQKFNLLMGRELQKHFQLSPQIVIMMPLLEGLDGVKKMSKSLNNYIGINEPAGEMFGKIMSISDKLMWRYFELLSLKKSMANIQQMQQEAEQGANPRQFKVELALEIVARFHDKTAAETAYQEFEQRFKSGAIPTDIKTITLTIDADSLSISNVLKQAGLAPSTSEALRSISAGAVKIDSVKIEDPKLTLQANTTHIYQVGKRRFAKVTILQNLACKK
SIO_010081: DMP02_RS00700
subclass of: SO_0000673
so part of: DMP02_RS00700
location: complement(139946..141163)
location: region:139946-141163:-1
so has part: feature:139946-141163:-1:exon

WP_126322204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139946-141163:-1:exon

DMP02_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsmI
locus tag: DMP02_RS00705
old locus tag: RVIR1_01460
so part of: sequence
location: complement(141153..142010)
location: region:141153-142010:-1
so has part: feature:141153-142010:-1:exon
subclass of: SO_0000010

position:141153:-1
position: 141153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142010:-1
position: 142010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141153-142010:-1:exon

DMP02_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsmI
locus tag: DMP02_RS00705
old locus tag: RVIR1_01460
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005770442.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MLKTPALYIVATPIGNLGDMSTRAIETLKSVDYIAAEDTRHSHKLLVHFGIDTPVLSLHEHNESECSEKLLEKLLNKGQRIALISDAGTPLISDPGYRLVKKVRQHKIPVIPIPGPCALITALSASGLNCEQFIFEGFLPEKKIARQKKLDALRYETRTLIFYEAPHRILNLIEDMLAIFGAQRRVVLARELTKSFETIHEGNLEELIIWLNNDKNQQRGEFVVLTEGNKPSLQHSELEIQRILKLLLDELPIKQAAALAAKITHGKKNKLYAQALALTGKNHDN
SIO_010081: DMP02_RS00705
subclass of: SO_0000673
so part of: DMP02_RS00705
location: complement(141153..142010)
location: region:141153-142010:-1
so has part: feature:141153-142010:-1:exon

WP_126322205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141153-142010:-1:exon

DMP02_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00710
old locus tag: RVIR1_01470
so part of: sequence
location: 142091..143452
location: region:142091-143452:1
so has part: feature:142091-143452:1:exon
subclass of: SO_0000010

position:142091:1
position: 142091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143452:1
position: 143452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142091-143452:1:exon

DMP02_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00710
old locus tag: RVIR1_01470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034965.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid permease
translation: MAEQAKQQKLGLWMLTALVAGNMVGSGIFLLPASLAEYGSISLLSWIVTAGGALLIALVFAKLGTVMPRIGGPYAYCREAFGDFVGFQMAYNYWIALWVGNAAIAVALTGYLSFFFPFLSKNAALSCCVSIGLVWLMTFINLWGVRHAGIFQLLTTILKLIPLLLIALVGIFYIHPHYLADFNLTGKSNFTAFSSAATLTLWSFIGLESASVPAGHVENPTRNIPRATILGVLIATGVYILSSIAVMGSMPLSQLAHSNAPYADAARLMFGPIGSIVVAMGAVISCLGALNGWILLQGQIPLAAAQDKLFPPIFAERSANGTPVVGLVISSVLITVLLLMTLSHSLVKQFTIIILLATLASLIPYFLTTMSELVIFLKYPALFKNGKKLLGSVIIAILAGVYSFWAIIGSGEQTVFYGTLLLLSSVPVYVWMKWRAPVDEINLNTGEQPLPLP
SIO_010081: DMP02_RS00710
subclass of: SO_0000673
so part of: DMP02_RS00710
location: 142091..143452
location: region:142091-143452:1
so has part: feature:142091-143452:1:exon

WP_172593946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142091-143452:1:exon

DMP02_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00715
old locus tag: RVIR1_01480
so part of: sequence
location: 143462..146461
location: region:143462-146461:1
so has part: feature:143462-146461:1:exon
subclass of: SO_0000010

position:143462:1
position: 143462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146461:1
position: 146461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143462-146461:1:exon

DMP02_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00715
old locus tag: RVIR1_01480
inference: COORDINATES: protein motif:HMM:NF013117.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel
translation: MYKLIVLLVFLFGGFSTTAFAELPNQSPLLTSAQQQLIAEQTRSRLLAKKLQGLQDEQKNLYAQPITQKSLDRLDLMITMAKADLESINLTLQTTQQSTDLILDSIRNVPGKWQNLDRNVPATQAQQANLQQYVQERRGLFKLQQQRIKTLQQSREIIQQTLAFFEEWRSDLQRKYQLQEQTNREQSLDGLAARLDQEQKKWVVRLNQWNEELKKAEATGFLNNASYDQIEFNIFEAEERNNLLETELNTAKIANKLQVLENAFNQKLPLSTLSNLQHQIENINDQTQVSTNLLQKKLKFLQNYTQLVDKDLKGEGVNLVQDKAQLAVLKSISTGYQTLLLKTKQLQERVKTQQISVAQQLKLQLANRQGLPGWNLGAWIALGKTIGQIPALTLEKLASFYDPIMSKLELVSGWQWLIGMIGFLLWFALWLKLRRFLAVDRVRLQQRSRGFFSAQTVIVVLQLLQRHLTGIMLLAALIGLLFLLNIPLKLFFLIISVSVVCLGFSIVIQLAHILLLENTTDESGHDVKLYYRLRTTLLIGGIITLATILVNQLPVNYEVQDLFGRLFMFFLLVVALVLMKGWEVVPTLLEPYIENKHAYLKRIIRWLSFLIPFSLLTNALIGLVGYVELAWAIAHYQGLFLIALTAYLLLRGLLDELIRWASEQCIRRFRNGWLWSQALLKPFHQILKLALLLLSIMGLFELYGWGDRVPIINTNVSKLLGTKLFDITNTVAVTGLTVVQLAVLVVILIWIAHWSREFAYRWLFVHTKDLGLRNSLSIFTQYTLIAIGITIGLNILGLTWANISLIFGLFSLGVGLGLRDLFNNFFTGIFLLLERPVKVGDWVTIGNYDGQVSHIGARSITVTTDDRQELLVPNADIFSKNFINWTHRDSVVRALVTVKSNRNDNPNRIRDIILEVLATVPKILTNPKPEVYFKEIDKVLLEFKVEYYVDLNHISSRSGVRSQFLFSLWERFSSEGILPPEAPHDVHIAGKIDLQPSRG
SIO_010081: DMP02_RS00715
subclass of: SO_0000673
so part of: DMP02_RS00715
location: 143462..146461
location: region:143462-146461:1
so has part: feature:143462-146461:1:exon

WP_126322206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143462-146461:1:exon

DMP02_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00720
old locus tag: RVIR1_01490
so part of: sequence
location: 146543..147661
location: region:146543-147661:1
so has part: feature:146543-147661:1:exon
subclass of: SO_0000010

position:146543:1
position: 146543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147661:1
position: 147661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146543-147661:1:exon

DMP02_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00720
old locus tag: RVIR1_01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013101202.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MIHEDGELSGNADKSLSAKSILFTGGGSAGHVTPSFSLIQMLKNKGATIFYVGSKEGIERSLVAALNIPYYAVTTGKLRRYWSWQNFLTPFQLVFGVMQSFLLCRRLKPNIIFSKGGFVALPVVIAAWLNRIPVVIHESDLTPGLANRLSFPFAKFICVTFPVSAKYFKNKDKILVTGVPIRESLYQGDRNKGLRFCGFNEEKPVLLIMAGGLGSVDINNMVRRLLVPLTSKFQVIHLCGKGKLDDHFSNIPDYKQFEYLHEELADVLASADLVISRAGATSIYELIALKKPHILLPLSKQASRGDQIKNADYFAQQGLSTVLYAEAFSDEKFLRAIFDCYANLEAIKNKLANFKHLDSSRLIVDKLVALSK
SIO_010081: DMP02_RS00720
subclass of: SO_0000673
so part of: DMP02_RS00720
location: 146543..147661
location: region:146543-147661:1
so has part: feature:146543-147661:1:exon

WP_126322207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146543-147661:1:exon

DMP02_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00725
old locus tag: RVIR1_01500
so part of: sequence
location: complement(147679..148353)
location: region:147679-148353:-1
so has part: feature:147679-148353:-1:exon
subclass of: SO_0000010

position:147679:-1
position: 147679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148353:-1
position: 148353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147679-148353:-1:exon

DMP02_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00725
old locus tag: RVIR1_01500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFHYPQINNSKKPRDGINLSNYLYTNQINTPFGNLSLKYLHVIMRVDWINVKIKSLFDSFYQTRQGFSGISTSGFEELEHQLITEELMYWLRKIADELISLTYIQYTDPTGLTINKLKFDRIGAILQEPSHSFSQFFKDHLPILEKLNEVSNIYKHSFINTAHGQISELEPTIIAFNLKRNDLKNAPEYYTQTLRIFIENYNKFYIDITARLKNNTYSNYQIR
SIO_010081: DMP02_RS00725
subclass of: SO_0000673
so part of: DMP02_RS00725
location: complement(147679..148353)
location: region:147679-148353:-1
so has part: feature:147679-148353:-1:exon

WP_126322208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147679-148353:-1:exon

DMP02_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00730
old locus tag: RVIR1_01510
so part of: sequence
location: complement(148397..150820)
location: region:148397-150820:-1
so has part: feature:148397-150820:-1:exon
subclass of: SO_0000010

position:148397:-1
position: 148397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150820:-1
position: 150820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148397-150820:-1:exon

DMP02_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00730
old locus tag: RVIR1_01510
inference: COORDINATES: protein motif:HMM:NF016260.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translocation/assembly module TamB domain-containing protein
translation: MTIKKISSLRWIALYSITLLFLSITYLFLTTQKGLEIASQLTQQCLPGTLKITELNGRLLGPIEIKDLSYKDTNTTLTISSVQFDWHWSALLHGQFSIGSLSINKLILAIKEQEQQKDSAASKTTIDDFQLPTFFKHIHINSMEIKQSVLRYGANTLSLDGSLHKQWNFNWQLTIPQLEALLSDSKGQLFLQGKINGNYSSPHFYLSSLKTNLSYLDWQLNQVQGSFDLDSLDSKKWLLELKAVQLKNNTFSLSPIHISLNGNLQPFSLQGNLSSFKIVRKEENTVTHNLNIPSSQITAKLSSEGLAATLITDPTVVDHLSAHIQLPHYKYALEINPKQIINANIQLTLKNLNYFSTFIPALKNPQGSLNTQLNLSGLLFSPSINGELNLKNGSTQIPLLGLYLKKMNLVFHTDKNVLQGAGRLDSGTGTLTLQSKTQLNQPQFPSLINLKGNNLEISHTKEYKITASPELQIQANTQHIEATGLIVFPKASIKINENSFNGIELSNDVVFVTHKKETTSLPFTYKNNIKLQLGNDIQFSYQGLRTKITGNLDIHQESDHPILATGVLSLTEGEYTYYGQSLKLQPHSLLSFANSPIDHPNIDVTANKSVWILPKISTGNNSSTPGSKLGSSSFISSALQTTQPIQATVGVRLQGYLENPKITLYANPANAISSQLEMLSYLVTGQPSDQLSAASMQLLIGAATQAGGEKTGVGHMINKAQKKMGIDQLTIGANPIFNPNTNKLQQNTSLIIGKSFSPRLNISYSLELLDPISVLQINYLLNKNFSLQSTNSNFANGIDLLYKVERN
SIO_010081: DMP02_RS00730
subclass of: SO_0000673
so part of: DMP02_RS00730
location: complement(148397..150820)
location: region:148397-150820:-1
so has part: feature:148397-150820:-1:exon

WP_126322209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148397-150820:-1:exon

DMP02_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00735
old locus tag: RVIR1_01520
so part of: sequence
location: complement(150817..152553)
location: region:150817-152553:-1
so has part: feature:150817-152553:-1:exon
subclass of: SO_0000010

position:150817:-1
position: 150817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152553:-1
position: 152553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150817-152553:-1:exon

DMP02_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00735
old locus tag: RVIR1_01520
inference: COORDINATES: protein motif:HMM:NF013283.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor
translation: MIKKRKFIIAILAISGALYALKGSADSSSPLAVYQIHGLEPALTTLVKARLAHSLEALTPPLTANIIQAWNAQHAPVEIQQALAPYGYFKPSIHSKLLYQNKTWQAIYTINPGPLLKITQLKASIQGEGANNAALKRLMDQLPIHQGDSFLSECYEQTKQKLLSTAIAEGYLSAYFSQHRVLINRQSYIANIDLVLDTGPRYYFGPINFEQTILKDSLLRRYVPFKPGDPYSSDRLLKLQDNLNRSGYFQRISINDLTSQKQNQQIPILFKLTPRPSQQYTAGIGYSTDVGIRGTLGWESRYLNQFGHKLSIVSQLSKIQNSLQTTYIIPGKQPNTDNYTINFAIVRKQLPQVDRTTQQIGLGNTHQWKGWQRNLFLNYQIERFNYIDRPSATAHLLTPGITFSRSQFDNPLYALHGYRLNLRVQGADKNLLSSASFLQTQLQTKYILSWNKNSRVILRSDLGYTITPNPTNFPPSLLFYAGGSQSVRGYDYQALGPGRYLMVGSAEYQHKIVNNFYGATFFDMGNAVNNFPINLQKGTGIGIVWISPLGPMQLTLAKALDLPNRPLRLQFSMGVDLL
SIO_010081: DMP02_RS00735
subclass of: SO_0000673
so part of: DMP02_RS00735
location: complement(150817..152553)
location: region:150817-152553:-1
so has part: feature:150817-152553:-1:exon

WP_126322210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150817-152553:-1:exon

DMP02_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00740
old locus tag: RVIR1_01530
so part of: sequence
location: complement(152714..153850)
location: region:152714-153850:-1
so has part: feature:152714-153850:-1:exon
subclass of: SO_0000010

position:152714:-1
position: 152714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153850:-1
position: 153850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152714-153850:-1:exon

DMP02_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00740
old locus tag: RVIR1_01530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVRKKYLEKISLFSHSIQAGFFSIIFTFTSNIGGIRIIFERGLHAILFPIAITPDAIASLIALLSFGKAKNKNLGKTFDLIYVPTKAALVFTAVFAGLSVTIVNSLFLTVISSGIIYHTGLGLYNAYQWWKTPENSASHLKLKNLYKNNTINNGISSLIGIIILTGVITTLIFNPLLSAPILAIAGIGTAVMLMLTTTYGVYRHFKQPTIPRPLSLIDSTTPLLANTTESAIPELTGYYYRKFRSEKLSGDNFEEDRAYLLTEIENKKADLDSQIAHSRNKRREFFWPEELKRQAKRAFLQDIFEKLSEFSPKLNNTEFINAINSILSDVQAEAFQSFFRAKSDVGDIVDAIKAFVNLYKDISCELPSKDLHPNNSY
SIO_010081: DMP02_RS00740
subclass of: SO_0000673
so part of: DMP02_RS00740
location: complement(152714..153850)
location: region:152714-153850:-1
so has part: feature:152714-153850:-1:exon

WP_126322211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152714-153850:-1:exon

DMP02_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00745
old locus tag: RVIR1_01540
so part of: sequence
location: 154056..155270
location: region:154056-155270:1
so has part: feature:154056-155270:1:exon
subclass of: SO_0000010

position:154056:1
position: 154056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155270:1
position: 155270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154056-155270:1:exon

DMP02_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00745
old locus tag: RVIR1_01540
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase family protein
translation: MFKIRSFTPLITGLILTLFMPMVKADPIIPITAPGTINTAPQQPTLTPIPPNINAKAYLLMDAYSGSILASGNIDERVSPASLTKMMTSYVISMALKEGRIHPEELVTISEAAWKTGGSKMFVKVGDKVPVSQLMQGIIVDSGNDACVAMAEYVAGSQEAFVSLMNQAAARLGMNHTHFMDVDGLPDANHYSTARDMGILARALILDFPEDYKWYSQKWFSYNGIKQPNRNRLLWRDANVDGIKTGHTNEAGFCLAASGLKNNMRLITIVMGAPSDEMRAQDSQKLLTYGFRFFESQKLYSANTKLATPRVWFGKNSQVNVGLARDLYATLPTGQNKTPTTKMVFTSHLIAPIKKGDVVGQINVVFNDKPIATVPLVALENLPKGGVWRSLVDHTSLWFHKAKA
SIO_010081: DMP02_RS00745
subclass of: SO_0000673
so part of: DMP02_RS00745
location: 154056..155270
location: region:154056-155270:1
so has part: feature:154056-155270:1:exon

WP_126322212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154056-155270:1:exon

DMP02_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00750
old locus tag: RVIR1_01560
so part of: sequence
location: 155476..156366
location: region:155476-156366:1
so has part: feature:155476-156366:1:exon
subclass of: SO_0000010

position:155476:1
position: 155476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156366:1
position: 156366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155476-156366:1:exon

DMP02_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00750
old locus tag: RVIR1_01560
EC number: 2.3.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MILFNGLRAAIAAILYLINLIILFVPLAILGLFCYLFPLKIWQRKCKCWMEHLPVYWIKGNYLIQELTTSIKWEVKGLDKLSYNEWYLLISNHQSWADILVLQRIFNQKIPPLKFFLKRELLWTLPFASWACWLLGFPFMHRYSKKVLAKHPELKNKDVEATKRACIRFKAIPTTVANFIEGTRFSEKKRQSQQSPYQYLLRPKSTGIGFSLAVLGDFFHKILNVTIIYPPKKSGLFHFLSGDIKKITVEIEAIPITSDWIGDYQNDRQFRASFQRKLNYLWEQKDELIKRTQARY
SIO_010081: DMP02_RS00750
subclass of: SO_0000673
so part of: DMP02_RS00750
location: 155476..156366
location: region:155476-156366:1
so has part: feature:155476-156366:1:exon

WP_126322213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155476-156366:1:exon

DMP02_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hemC
locus tag: DMP02_RS00755
old locus tag: RVIR1_01570
so part of: sequence
location: 156436..157374
location: region:156436-157374:1
so has part: feature:156436-157374:1:exon
subclass of: SO_0000010

position:156436:1
position: 156436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157374:1
position: 157374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156436-157374:1:exon

DMP02_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hemC
locus tag: DMP02_RS00755
old locus tag: RVIR1_01570
EC number: 2.5.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597727.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylbilane synthase
translation: MTARKHLRIATRKSPLAYWQANAVKMQLEKHYPFMRIELFPLVTEGDRYLETSLNKLGGKGLFVKELEKALLNGDADIAVHSMKDVPMDLAKGLKLTAICEREDVRDVLISTSGENIKQLPSGSNVGSSSLRRQSQLMALRPDLTVQVLRGNIGTRLEKLAAGEYDAIILAAAGLIRLQKTSCISEYLEPSYFLPAPGQGALGIESRSDDNELLSLMAILNHKSTYDCVSAERALSRQLAGSCQVPIAAYAECLPNEQLRLQGLVAKPDGSLLIRVEKHGSVNEVEKLGITAARELLAQGADRILQDLSWSS
SIO_010081: DMP02_RS00755
subclass of: SO_0000673
so part of: DMP02_RS00755
location: 156436..157374
location: region:156436-157374:1
so has part: feature:156436-157374:1:exon

WP_126322214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156436-157374:1:exon

DMP02_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00760
old locus tag: RVIR1_01580
so part of: sequence
location: complement(157360..159312)
location: region:157360-159312:-1
so has part: feature:157360-159312:-1:exon
subclass of: SO_0000010

position:157360:-1
position: 157360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159312:-1
position: 159312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157360-159312:-1:exon

DMP02_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00760
old locus tag: RVIR1_01580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDSTANIYQKSRAEAISAVDSIQATPLHNVNVIAGSAAGSNDPLYLYDTINASRYAATWDGLIAGGAIVSAAIGVYVAAYRDIRNREKTSHFFYFRRLLESKKEGEIFTLMGESKYDYKLLAAAAHFYSPDISKFVRYKRQFFCWGRKKEELKYLQNFLNGKNKKETLATLFQAIIDKVVIFLNKENTLDGARFECKSHSYSIELTKNYAEKMFSAHKNSLNEITIKPNPSLGKKIMAAVGSASFIYWLVGFGFYLFPVAIVLGIALPPLMIAMACLAWQLGYSMGEPTQNISDINTKNQQKTLFERRIIECSKRQAFIKHNALPVVDFKGSQLHSDLQKTLNKPRFSKVHAALHGFVGGCFYPFFATWLFGDLFKLITGLIIGTSITGPAAPAIFGTIFMVIAGATLLAGIGYGIYCAIHAVKNHNKKFEELSIKIKHLEETNSKVADLSLQTYDRFLRRFSLEEPYWTRIKRGLNRVWEAIKHIGIGSLVFRLVIWGSIAALTSLTLSAPVFITCIVVFAALAAVCSYYAYEAHSKEKQAENVLEHLDYSQQINENKFSSVATNGRVLPQEAKNNKQHPTPDKPCEQPVRAAMTDIDKESNPTLKNPRIARWESPRAPIISLLYPSSSDKNKTMTDSTPTEKVSARP
SIO_010081: DMP02_RS00760
subclass of: SO_0000673
so part of: DMP02_RS00760
location: complement(157360..159312)
location: region:157360-159312:-1
so has part: feature:157360-159312:-1:exon

WP_126322215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157360-159312:-1:exon

DMP02_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: nth
locus tag: DMP02_RS00765
old locus tag: RVIR1_01590
so part of: sequence
location: complement(159575..160216)
location: region:159575-160216:-1
so has part: feature:159575-160216:-1:exon
subclass of: SO_0000010

position:159575:-1
position: 159575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160216:-1
position: 160216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159575-160216:-1:exon

DMP02_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: nth
locus tag: DMP02_RS00765
old locus tag: RVIR1_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035237.1
GO function: GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III
translation: MNAKKRLAIFQRFNKQNPHPQTELVYRSPFELLIAVILSAQATDKSVNRATKTLFAAASTPEAIAALGLEGLKKHIKSIGLYNTKAKNIINTCEILLKQYKGKVPEKRELLEKLPGVGRKTANVVLNTVFDQPTVAVDTHIFRVCNRTGLAKEKTPLAVEKTLLKTIPKPYLKNAHHWLVLHGRYTCLARKPKCPECIIQDLCEYPKRFENEK
SIO_010081: DMP02_RS00765
subclass of: SO_0000673
so part of: DMP02_RS00765
location: complement(159575..160216)
location: region:159575-160216:-1
so has part: feature:159575-160216:-1:exon

WP_126322216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159575-160216:-1:exon

DMP02_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00770
old locus tag: RVIR1_01600
so part of: sequence
location: complement(160218..160865)
location: region:160218-160865:-1
so has part: feature:160218-160865:-1:exon
subclass of: SO_0000010

position:160218:-1
position: 160218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160865:-1
position: 160865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160218-160865:-1:exon

DMP02_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00770
old locus tag: RVIR1_01600
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S24 family peptidase
translation: MKNRSMSTILKGLMAELGINESELARRTGIGQPVVHRICSGETDNPKVATLSPIATFFAISISQLIGDEPLPIDRIPGTFNPDAQGWRQIPLLDWEQILAWPNLNKKSGPLPTVSTDIELSQHAYAVAVRDTTMEPRFPEGTVLLIDPDLKPNNLDFSIIHIDGHDLPNFKQVLIDGEHTILKPLNTDFKTLLLNKPHKFLGVMVQSRMDFKKRK
SIO_010081: DMP02_RS00770
subclass of: SO_0000673
so part of: DMP02_RS00770
location: complement(160218..160865)
location: region:160218-160865:-1
so has part: feature:160218-160865:-1:exon

WP_126322217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160218-160865:-1:exon

DMP02_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpsO
locus tag: DMP02_RS00775
old locus tag: RVIR1_01610
so part of: sequence
location: 161077..161334
location: region:161077-161334:1
so has part: feature:161077-161334:1:exon
subclass of: SO_0000010

position:161077:1
position: 161077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161334:1
position: 161334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161077-161334:1:exon

DMP02_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpsO
locus tag: DMP02_RS00775
old locus tag: RVIR1_01610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034835.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MLAKSEIMAKYQRCPGDTGSPEVQVALLSGAIEQLNGHFQAHKKDNHSRQGLLKKVALRRKLLKYLKKVDLQRYMSLIKQLGLRG
SIO_010081: DMP02_RS00775
subclass of: SO_0000673
so part of: DMP02_RS00775
location: 161077..161334
location: region:161077-161334:1
so has part: feature:161077-161334:1:exon

WP_126322218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161077-161334:1:exon

DMP02_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pnp
locus tag: DMP02_RS00780
old locus tag: RVIR1_01620
so part of: sequence
location: 161433..163568
location: region:161433-163568:1
so has part: feature:161433-163568:1:exon
subclass of: SO_0000010

position:161433:1
position: 161433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163568:1
position: 163568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161433-163568:1:exon

DMP02_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pnp
locus tag: DMP02_RS00780
old locus tag: RVIR1_01620
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597721.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MLNPIKKEFQFGAHMMSIETGAIARQATSSVLVTLEGTTVLVAVVGRKQAGETTDFFPLNVHYQERSYAAGRVPGGYFKREGRPTEKEILTSRLIDRPIRPLFPEGFHNEVQVVATVLSSNPEINADIPAMIGASAALALSGLPFKGPIGAARVGYAQGEYLLNPTFKQLETSDLDLVVAGTENAVLMVESQAAELSEEIMLGAVLFGQQQMQVAIQAIKALVQEAGKTAWDWQPSARLDAALEQAMTQAFEPSIIEAYQIPEKLDRKAKLDELREAMTQRYLDEEKGINAKAIQGLFASLEKKIVRHRILDGLARIDGRDKTTVRPITVQPGLLPRTHGSVLFTRGETQAIVVATLGTDRDAQIIEALDGEARETFMLHYNFPPYSVGETGQVGSPKRREIGHGNLAKRALRAVLPSETDFPYVLRVVSEITESNGSSSMATVCGASIALMDAAVPLKKHVAGIAMGLIKEKDRFAVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIKIDGITKEILEIALGQAKEGRLHILGIMEKALPGARVEVSPYAPRITTLKINPDKIRDLIGKGGATIRSITEETGTLIDISDDGIVRISTSDLEACQNAIERIKKVTAEVEVGVIYEGPVVKLTDFGAFVNVLPGRDGLVHISQISNDRVENVSDVLKEGQIVKVKVLEIDRQGRIRLTMKENELETVNETANETENEIQS
SIO_010081: DMP02_RS00780
subclass of: SO_0000673
so part of: DMP02_RS00780
location: 161433..163568
location: region:161433-163568:1
so has part: feature:161433-163568:1:exon

WP_197720786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161433-163568:1:exon

DMP02_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00785
old locus tag: RVIR1_01630
so part of: sequence
location: 163696..164061
location: region:163696-164061:1
so has part: feature:163696-164061:1:exon
subclass of: SO_0000010

position:163696:1
position: 163696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164061:1
position: 164061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163696-164061:1:exon

DMP02_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00785
old locus tag: RVIR1_01630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018576622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MQHTSGFLNLVADAKSRITEISISDLADKLIKVPFYLIDVRELDEYKQGAIPNAIHLSKGTIERDIERLIPDNAADIVVYCSGGFRSCLVADNLQKMGYQHVASLTGGVRAWLEAGYPLAT
SIO_010081: DMP02_RS00785
subclass of: SO_0000673
so part of: DMP02_RS00785
location: 163696..164061
location: region:163696-164061:1
so has part: feature:163696-164061:1:exon

WP_126323464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163696-164061:1:exon

DMP02_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00790
old locus tag: RVIR1_01640
so part of: sequence
location: 164099..164185
location: region:164099-164185:1
so has part: feature:164099-164185:1:exon
subclass of: SO_0000663

position:164099:1
position: 164099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164185:1
position: 164185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164099-164185:1:exon

DMP02_RS00790
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS00790
old locus tag: RVIR1_01640
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:164133..164135,aa:Leu,seq:cag)
SIO_010081: DMP02_RS00790
subclass of: SO_0000673
so part of: DMP02_RS00790
location: 164099..164185
location: region:164099-164185:1
so has part: feature:164099-164185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164099-164185:1:exon

DMP02_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00795
old locus tag: RVIR1_01650
so part of: sequence
location: 164615..165769
location: region:164615-165769:1
so has part: feature:164615-165769:1:exon
subclass of: SO_0000010

position:164615:1
position: 164615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165769:1
position: 165769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164615-165769:1:exon

DMP02_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00795
old locus tag: RVIR1_01650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKEFFFDKESNEIIENCIRRHKEIKSEIYHRNESKQLKNSVELAENISDISINDIIKMLIAIKYDPDLRTMSISLSRRSQLFDKLILMKSNDKNPWVLRVHIYPVVDMREGFVTNLGTKADSESFVHFHRWQLTSKFITGGFLNSQYEVLKTGNLETSFQEYELVATKDAGAEGRKAVWRGVGYPQKKASDIYQQGDHVHYPIEIPHRVDTSAAGLFGKTITLAHTGESQKKTSTFYLKKESEGDVVDNLCYSEKEFDSAVDTTITTLQLILLNQELINFGFKRFGHANSLETELLPTIAMCELEENFKEKGDDSNLIADTINKHTDKMDKHSLKNLIARSQEVLMNQGLFKRTIADIHNPEMQEAIANRGNNQVPRHVLGQI
SIO_010081: DMP02_RS00795
subclass of: SO_0000673
so part of: DMP02_RS00795
location: 164615..165769
location: region:164615-165769:1
so has part: feature:164615-165769:1:exon

WP_126322219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164615-165769:1:exon

DMP02_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00800
old locus tag: RVIR1_01660
so part of: sequence
location: 165945..167021
location: region:165945-167021:1
so has part: feature:165945-167021:1:exon
subclass of: SO_0000010

position:165945:1
position: 165945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167021:1
position: 167021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165945-167021:1:exon

DMP02_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00800
old locus tag: RVIR1_01660
inference: COORDINATES: protein motif:HMM:NF013355.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSVSSPLYDIRKTFEENFSDPPFSLITPPSRSWPPKAQWKQFLGFSLASNIGAAACAVTTGKGIALLARLGFDVLTYKTIRRHATPSHPLPNIVYLAKETVLSEWDLDKPLYTQENPLPAEKIAISNSFGNGCLEPEIIIQDIAFAKNSLSEGQVLIVSVYGEGESLEAIATEFAETALFAQQAGADIIELNLSCPNLLKAGEPIYKDVEVVNKIISRVLSRVGNRSVLLVKIGLVSDTAVLGKILAAIAKAGARGVSAINSISMRVLDQTQQPAFGKRIFSGVSGYPIYALALQFINKISQINKEQKLNLAILGMGGITLPEHFNAFFNAGADVALSATGMMWNPYLASQYHQQMQ
SIO_010081: DMP02_RS00800
subclass of: SO_0000673
so part of: DMP02_RS00800
location: 165945..167021
location: region:165945-167021:1
so has part: feature:165945-167021:1:exon

WP_126322220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165945-167021:1:exon

DMP02_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: carA
locus tag: DMP02_RS00805
old locus tag: RVIR1_01670
so part of: sequence
location: 167021..168073
location: region:167021-168073:1
so has part: feature:167021-168073:1:exon
subclass of: SO_0000010

position:168073:1
position: 168073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167021-168073:1:exon

DMP02_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: carA
locus tag: DMP02_RS00805
old locus tag: RVIR1_01670
EC number: 6.3.5.5
inference: COORDINATES: protein motif:HMM:NF009475.0
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MKTLIPTRLLLKTGESFAGFSPDSQINNQTGEVIFNTGMVGYVESLTDPSYAGQILCFTYPLIGNYGVSAPGTWESAKIQVKGVVMSELAPFYSSDSAQCSLLAWLEEQKIPYMTGVDTRALTHCLREKGVIPGIMTSSVKDPKEFIEFDTIDWVKQVTISEPIYYGKHGKKIIVVDCGMKENILRCLLQYPLQIKRVPYDYDYSQEDYDGVFISNGPGDPILCQKTVTILQKVLAKKKPCFGICLGTQLMALAVGAKTYKLVFGHRSQNQPCIYLPTERCYLTSQNHGYAVDEKTLPADWKILFRNLNDQSVAGIEHTEHPFFSVQFHPEAAPGPMDTQWLFERFYRTL
SIO_010081: DMP02_RS00805
subclass of: SO_0000673
so part of: DMP02_RS00805
location: 167021..168073
location: region:167021-168073:1
so has part: feature:167021-168073:1:exon

WP_126322221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167021-168073:1:exon

DMP02_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: carB
locus tag: DMP02_RS00810
old locus tag: RVIR1_01680
so part of: sequence
location: 168081..171272
location: region:168081-171272:1
so has part: feature:168081-171272:1:exon
subclass of: SO_0000010

position:168081:1
position: 168081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171272:1
position: 171272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168081-171272:1:exon

DMP02_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: carB
locus tag: DMP02_RS00810
old locus tag: RVIR1_01680
EC number: 6.3.5.5
inference: COORDINATES: protein motif:HMM:NF009455.0
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
translation: MKKQFKGKKILILGSGGLRIGQAGEFDYSGSQAIKALKQENIKTVLINPNIATVQTDASLADEVYLQPLNFSTVERIIAKEKPDGILLGFGGQTALNLGLQLEEKGVLKKHKVTVLGSSVESIRQTEDRDLFKLALKKIEVKTPLSIAAKTVQQALKAAEKIGYPVMLRSGFSLGGLGSGKIPNKETLEQRAHESLVASPQILIEEYLFGWKEFEYEIVRDRQGNGLTICNMENMDAMGIHTGESIVVAPAQTLSNAQHQFLRNIALKAADCFNIIGECNIQFAINPENGDYRVIEMNARLSRSSALASKATGYPLAFIATKLALGYCLHELKNTVTQVTCAYFEPALDYIVVKIPRWDIQKLKAAERTIGTEMKSVGEVMAIGRSFPEALQKAVGMLNIGASCLSDYSEIIKHPEKEVQVATDRRLFALYQFFLQGGSVTQAQKLSQIDLWFLAHIHAIADLEKQLTQTNLNQKLLLQLKQSGFSDQAIAQLKNKSVKQIRSLRLKHKIIPYVKQIDTLAGEFAAQTNYLYLSYHAVEHDIKPAALRPIVVLGSGPYAIGSSVEFDWCAVNTVQTLRRLKETAIIINSNPETVSTDYDESDRLYFEQLTFERIQDIVDFEQAKGIIVSVGGQIANNLVLPLAKAGYPLLGTDSKSIDQAENREKFSALLNKLAIDQPAWERITSLKKAKAFAAEVGYPVLIRPSYILSGAAMNVVYDPESLQQHLQAAALVSQEHPVVISKFVEEAKELEIDGVAQQGEIVIEAISEHIENAGVHSGDATVVLPPQKLYLETIRRTKKIARQIVKALNITGPFNIQFIAKNNDIQVIECNLRASRSFPFVSKVTGHNLIQIATEVMLAKHQPQQYETLELDYVGVKAAQFSYSRLKGANPVAQVEMASTGEVACIADDLVEAFYKAWLATDQTITEKKILLSIADNYKAKLLPWIKQLDEQGWLIYSTAGTHQFLSQQDIKSSLVNKTSEAKKPNIKHLIGQRKVAAIINIPSSATGLQRTDGFVIRRLAIDHHIPLVTNAQITQVFLQGLVTLWDKELPVDSWQSLVGKNS
SIO_010081: DMP02_RS00810
subclass of: SO_0000673
so part of: DMP02_RS00810
location: 168081..171272
location: region:168081-171272:1
so has part: feature:168081-171272:1:exon

WP_126322222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168081-171272:1:exon

DMP02_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pyrB
locus tag: DMP02_RS00815
old locus tag: RVIR1_01690
so part of: sequence
location: 171291..172214
location: region:171291-172214:1
so has part: feature:171291-172214:1:exon
subclass of: SO_0000010

position:171291:1
position: 171291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172214:1
position: 172214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171291-172214:1:exon

DMP02_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pyrB
locus tag: DMP02_RS00815
old locus tag: RVIR1_01690
EC number: 2.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035265.1
GO function: GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate carbamoyltransferase
translation: MSNLLFDTDIISMRDLSLDKINAVLKLAKQFKSKAPKKYLLDKIIAHCFFESSTRTRLSFEAASLRLGAQVIGFSNAENLSVTKGENLSDTIKTISKYADLIVLRHPQAGSASLAAEITDKPVINAGDGANQHPTQALADLMTIEETQGKLEGLSIALVGDLKYGRTIHSLIQACALFHCHLFLVAPPLLALPESFCDELHRQDIPFSLHANLDEVISKVDIIYMTRLQQERFNKDEHKLLENQFVLKAEKLKNAKPGLKVLHPLPRAGEIDKAIDKTPYAAYFEQVENAVYIRQALLTLVLNKNIN
SIO_010081: DMP02_RS00815
subclass of: SO_0000673
so part of: DMP02_RS00815
location: 171291..172214
location: region:171291-172214:1
so has part: feature:171291-172214:1:exon

WP_126322223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171291-172214:1:exon

DMP02_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00820
old locus tag: RVIR1_01700
so part of: sequence
location: complement(172426..174609)
location: region:172426-174609:-1
so has part: feature:172426-174609:-1:exon
subclass of: SO_0000010

position:172426:-1
position: 172426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174609:-1
position: 174609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172426-174609:-1:exon

DMP02_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00820
old locus tag: RVIR1_01700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAPEPLKIHFISKNGKQFNYPSSGKQIIAYKEKTLPTQSSKIKLKVDSFFKNQPNRTFCIFHLSSEITEQIDSIFNIIETNIECLRYNKQLEKYDKLPELEKKLNDAGYSLDLDTSSSSANRCATDPVRRKRTLSSATLKDLPEANANKGRGLNRSATFNNLRSSSFRQRNTKSSNDFTITLDNRNPINKDLELYSNRIDHLKKELTEANNAKAAAEKENAALERQLQKAQTETEQENRTLQGQLQTEKTAKDDAVQAQQEAEKKIGILQEQLTNAERKIEELENKLEEARKKSDQEIENLKGKLARAQQETAQKVNEAEVTKAAAEKEKRILREQLQTANTDKGAAVQAQQETEGKLKQATTAKDDAMQAQQEAEIKIGTLQEQLTNAGLKIEELENELKEARKESAQEIETLKEEVTTQNTFRAKTTANAELWSRLKKSKEDLKQLESEKADVVKQMDGLNAEKEQLIREVENLEEQIKTANQAKDLAVSAQQEAEGKVKTLQEQLTKTQTDVEATNEAKNLAVNAQQTAESKISTLQETNRELQTKLEEAEQETVRAKQANAELQRRLDDVEGQTQKDKKDQATQAEVQKPQQNNQDLQLLLQPLQRKLKQHADLLIQKNSGLALEKAGMISTLSTSLELFAMNNSNREESLEKLKRQIQNSRKTLEQHRNISSRLLCYIFRSSSVFKTTSARLLSNIEKTISPFDTHQSPVEPPNVQPRHRV
SIO_010081: DMP02_RS00820
subclass of: SO_0000673
so part of: DMP02_RS00820
location: complement(172426..174609)
location: region:172426-174609:-1
so has part: feature:172426-174609:-1:exon

WP_126322224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172426-174609:-1:exon

DMP02_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pyrC
locus tag: DMP02_RS00825
old locus tag: RVIR1_01710
so part of: sequence
location: 175026..176252
location: region:175026-176252:1
so has part: feature:175026-176252:1:exon
subclass of: SO_0000010

position:175026:1
position: 175026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176252:1
position: 176252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175026-176252:1:exon

DMP02_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pyrC
locus tag: DMP02_RS00825
old locus tag: RVIR1_01710
EC number: 3.5.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035530.1
GO function: GO:0004151 - dihydroorotase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroorotase
translation: MIQIKHIQTLDGTHRDLSIESQQEISIEAENLLLLPGLIDPHVHFRTPGLEYKEDWRTAAQASIKGGYTTVFDMPNTIPPTVTQLELQKKKDLIDSQLKDVKIPLRYHLFFGADKHHLGEIKKVKGQVIGIKVFMGCSTGGLVIDDDESLHAIFKLAAEEDMLVAVHAEDEHRLKENSKKIVLPQPYAIHSQIRDEKAASIAVKKAIDLVRLYGTRLYILHTSTRQEIDLIAQAKMEDLPVFAETTPHHLFLNSNDYDRLQGKAVMNPPLRTTAHQKALFQAIREGVIDTIGSDHAPHTIEEKARPYGACPSGVPGIETTLPLLLEAQHEGHLSLENIVDLTSRRAQEIFKLKPYADYVLVDLAASRVVNENELKTKCHWSPFAGLRLRGWPVYTILNNHLYDLYSLH
SIO_010081: DMP02_RS00825
subclass of: SO_0000673
so part of: DMP02_RS00825
location: 175026..176252
location: region:175026-176252:1
so has part: feature:175026-176252:1:exon

WP_126322225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175026-176252:1:exon

DMP02_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00830
old locus tag: RVIR1_01720
so part of: sequence
location: complement(176370..177281)
location: region:176370-177281:-1
so has part: feature:176370-177281:-1:exon
subclass of: SO_0000010

position:176370:-1
position: 176370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177281:-1
position: 177281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176370-177281:-1:exon

DMP02_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00830
old locus tag: RVIR1_01720
inference: COORDINATES: protein motif:HMM:TIGR00540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme biosynthesis HemY N-terminal domain-containing protein
translation: MKRFFIFLIILLFSVWIGVEIATDPGYVLITRHKLAIEMPLWLALIGFLLSFIVVYFLIRTIHYFGLLPKRWHTWLQNKQKQKQISIEDQTLFATLYQKPPDWNIVLNALPQLEKRSWLSEEQIQTLEHDSYAGLLQEALNTNLGKFEEKWQQLPHRLKKAPFFLNFYIQGLIQYQETEKAEELTRKLLKKHWLAPLVHSYGLIRSIQPERQLAYAEKWLKSHPHDPDLLLSLGRICKQLQLWGKARDYLEAGLTQNPSNPESYQELGELFEALGEPTEALQAFKKALKIRVDVCIAESKINY
SIO_010081: DMP02_RS00830
subclass of: SO_0000673
so part of: DMP02_RS00830
location: complement(176370..177281)
location: region:176370-177281:-1
so has part: feature:176370-177281:-1:exon

WP_126322226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176370-177281:-1:exon

DMP02_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00835
old locus tag: RVIR1_01730
so part of: sequence
location: complement(177278..178279)
location: region:177278-178279:-1
so has part: feature:177278-178279:-1:exon
subclass of: SO_0000010

position:177278:-1
position: 177278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178279:-1
position: 178279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177278-178279:-1:exon

DMP02_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00835
old locus tag: RVIR1_01730
EC number: 2.1.1.107
inference: COORDINATES: protein motif:HMM:NF016275.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MEQEPPIITATELNDDIPTPPTRPKSCIIACCAIGLLLATWLCLVLTFAFFWKKNNANTANLTLAQGQLSQNQKNLTQIQGIIQKNFTSNTNLIRLNEAKELIQLANYNLFYLRDPNSALFALNLANKQLAESNNSPASLETLRNLLTQNIAKLNALPHLNLGNTLTQLNSLKAQVEKLPLLSTELTSKETVNPPPQTTSEKRWVNAIQTSLHNFQQLIVVRHLDKPIEPLLPQIQQQYLQQNLQLLLQQAQWALLHHQQEIYQSSLQQTKEAIQQYYVEKSPAAQTIIQQINQLAEINLQTALPDLSPTLEAINSLIKTVASAPTDPKETPL
SIO_010081: DMP02_RS00835
subclass of: SO_0000673
so part of: DMP02_RS00835
location: complement(177278..178279)
location: region:177278-178279:-1
so has part: feature:177278-178279:-1:exon

WP_172593947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177278-178279:-1:exon

DMP02_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00840
old locus tag: RVIR1_01740
so part of: sequence
location: complement(178240..179043)
location: region:178240-179043:-1
so has part: feature:178240-179043:-1:exon
subclass of: SO_0000010

position:178240:-1
position: 178240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179043:-1
position: 179043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178240-179043:-1:exon

DMP02_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00840
old locus tag: RVIR1_01740
EC number: 4.2.1.75
inference: COORDINATES: protein motif:HMM:NF014641.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III synthase
translation: METLHRLKVLITRPEHQAKKLASDIQAHAGIPIFFPTIEIVPTDNTMLISEVFKKIDHYDFVIFISPNAVLQSASYIHHFWPSWPKKTKIMAIGPGTEATLKILNLSVDYRPEKDFNSEGLLALPPLQSPKQKKILICQGENGCLSLINTLEKRSANVNTLNLYKRSCPRLITNNIPNSNEIDIIICTSNTGLKNLVNLLQADWHDVLFDKQLLVISLRIAEFAEKLGFVKAPLISDNASNEAILNTLSRWEKEIWSKNRQSSPPPS
SIO_010081: DMP02_RS00840
subclass of: SO_0000673
so part of: DMP02_RS00840
location: complement(178240..179043)
location: region:178240-179043:-1
so has part: feature:178240-179043:-1:exon

WP_126322228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178240-179043:-1:exon

DMP02_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00845
old locus tag: RVIR1_01750
so part of: sequence
location: 179154..180335
location: region:179154-180335:1
so has part: feature:179154-180335:1:exon
subclass of: SO_0000010

position:179154:1
position: 179154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180335:1
position: 180335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179154-180335:1:exon

DMP02_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00845
old locus tag: RVIR1_01750
EC number: 2.7.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003634242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MVLPTLKDLDCSDKRVLIREDLNVPIENGHISSDARIKAALPTIQYALDQGAAVIILSHLGRPEEGHISAEFSLAPVAERLQVLLDRPVKFVADWLDGFEIAPGEVVLCENVRFQKGEKKNDPVLAKKIAKLGDIFVMDAFATAHRSEASTVGTAQFSPQACAGLLLMAEVKALTQALKNPARPLLAIVGGSKISSKLHVLSSLIDKVDSLILGGGIANTFLAAQGYKLGKSLVESDLVEEAKRLMLLAQQKHAEIILPTDVVVAKEMSATAKTKVKKLTEIEDDEMVLDSGPESIRLYNRAVVSAATILWNGPIGVFEMAPFEGGTRALSLAIADSGAFSIAGGGDTLAAIEKYNISDKISYISTGGGAFLEFVEGKTLTALKVLEEHQRDS
SIO_010081: DMP02_RS00845
subclass of: SO_0000673
so part of: DMP02_RS00845
location: 179154..180335
location: region:179154-180335:1
so has part: feature:179154-180335:1:exon

WP_126322229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179154-180335:1:exon

DMP02_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pyk
locus tag: DMP02_RS00850
old locus tag: RVIR1_01760
so part of: sequence
location: 180346..181776
location: region:180346-181776:1
so has part: feature:180346-181776:1:exon
subclass of: SO_0000010

position:180346:1
position: 180346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181776:1
position: 181776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180346-181776:1:exon

DMP02_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pyk
locus tag: DMP02_RS00850
old locus tag: RVIR1_01760
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035408.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase
translation: MNRFKRTKIVATLGPATDKEGVLPAMIAAGLDVVRLNFSHGKAEDHIKRANLVRECAKAAGREIAIMADLQGPKIRIARFKLGKIFLKEGAQFILDANLSKEAGDDKSVGIDYKNLPKDVQGGDLLLLDDGRLVLKVHKVQQNKIVCKVEVGGELSNNKGINRKGGGLSAVALTPKDKKDLKTAVELNADYIAISFPRSAADMKKARSLLKEAKGKAGLIAKIERSDAIPLLDEIIRASDAVMVARGDLGVEIGDAELPAVQKHIIQRARSLDKVVITATQMMESMIHNAIPTRAEVFDVANAVLDGTDAVMLSGETATGDHPDLVVAAMARICLGAERQVKTQVSRHRVECQFQRPDEAIAMAAMYTANHYNIKAIIALTESGATPLWMSRIRSGIPIYALAHSVQTTRRLALYRGVYPIYFNIDKLDKKRLNDLAIAALKKHGTLHKGERILITYGDVLKTQGGTNTLKILEVS
SIO_010081: DMP02_RS00850
subclass of: SO_0000673
so part of: DMP02_RS00850
location: 180346..181776
location: region:180346-181776:1
so has part: feature:180346-181776:1:exon

WP_126322230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180346-181776:1:exon

DMP02_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: fur
locus tag: DMP02_RS00855
old locus tag: RVIR1_01770
so part of: sequence
location: complement(181786..182211)
location: region:181786-182211:-1
so has part: feature:181786-182211:-1:exon
subclass of: SO_0000010

position:181786:-1
position: 181786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182211:-1
position: 182211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181786-182211:-1:exon

DMP02_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: fur
locus tag: DMP02_RS00855
old locus tag: RVIR1_01770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010958136.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferric iron uptake transcriptional regulator
translation: MDNQQLRQAGLKITAPRLKILALLEQASTRHLSAEDIYKALLESGEDIGLATVYRVLTQFETAGLVKQQNFEEGYSVFELNQGAHHDHLVCIKCGKVDEFVDKIIEQRQEAVAKQRGYKMTDHSLIIYGICSRCTKRVINK
SIO_010081: DMP02_RS00855
subclass of: SO_0000673
so part of: DMP02_RS00855
location: complement(181786..182211)
location: region:181786-182211:-1
so has part: feature:181786-182211:-1:exon

WP_126322231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181786-182211:-1:exon

DMP02_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: bamE
locus tag: DMP02_RS00860
old locus tag: RVIR1_01780
so part of: sequence
location: 182300..182596
location: region:182300-182596:1
so has part: feature:182300-182596:1:exon
subclass of: SO_0000010

position:182300:1
position: 182300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182596:1
position: 182596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182300-182596:1:exon

DMP02_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: bamE
locus tag: DMP02_RS00860
old locus tag: RVIR1_01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597701.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamE
translation: MTKWAINCFLLFLLSGCSIIYRPDIQQGNVLKQSTIQQLKLGMTEEQVRYLLGSCVLQTPFEPNRSDYVYFYQPGHAESTQRHVTLIFSAGRLVSIKK
SIO_010081: DMP02_RS00860
subclass of: SO_0000673
so part of: DMP02_RS00860
location: 182300..182596
location: region:182300-182596:1
so has part: feature:182300-182596:1:exon

WP_126322232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182300-182596:1:exon

DMP02_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00865
old locus tag: RVIR1_01790
so part of: sequence
location: complement(182613..182900)
location: region:182613-182900:-1
so has part: feature:182613-182900:-1:exon
subclass of: SO_0000010

position:182613:-1
position: 182613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182900:-1
position: 182900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182613-182900:-1:exon

DMP02_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00865
old locus tag: RVIR1_01790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfH family protein
translation: MFIQIEVAFASDKNQLIIPLSVSAACCIEEAIQHSGILSHFPEIDLTKNKVGIFGKLRPLNTLVQAGDRVEIYRALSIDPKKTRINRAKKQKALL
SIO_010081: DMP02_RS00865
subclass of: SO_0000673
so part of: DMP02_RS00865
location: complement(182613..182900)
location: region:182613-182900:-1
so has part: feature:182613-182900:-1:exon

WP_126322233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182613-182900:-1:exon

DMP02_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00870
old locus tag: RVIR1_01800
so part of: sequence
location: complement(182910..183344)
location: region:182910-183344:-1
so has part: feature:182910-183344:-1:exon
subclass of: SO_0000010

position:182910:-1
position: 182910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183344:-1
position: 183344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182910-183344:-1:exon

DMP02_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00870
old locus tag: RVIR1_01800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005773021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RatA family toxin
translation: MPIIQETLEVPYNVAEMYELVNDIAAYADFLPWCTESKIIKQDEDTIQAKLTLRGGGFSKSFTTSNRLQKDKMVEISLINGPFRHLEGFWAFEPTKKGCKVRLNLEFEFTSPLLAIAFSPVFEKIAQSLTQAFSDRAKQVYGAR
SIO_010081: DMP02_RS00870
subclass of: SO_0000673
so part of: DMP02_RS00870
location: complement(182910..183344)
location: region:182910-183344:-1
so has part: feature:182910-183344:-1:exon

WP_126322234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182910-183344:-1:exon

DMP02_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: smpB
locus tag: DMP02_RS00875
old locus tag: RVIR1_01810
so part of: sequence
location: 183429..183905
location: region:183429-183905:1
so has part: feature:183429-183905:1:exon
subclass of: SO_0000010

position:183429:1
position: 183429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183905:1
position: 183905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183429-183905:1:exon

DMP02_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: smpB
locus tag: DMP02_RS00875
old locus tag: RVIR1_01810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597698.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MNPKKASQSSTIALNRRARHDYFIEQSLEAGLVLQGWEVKSLRDGRAQLSESYVVLKNGEAWLLGCHITPLSTVSTQHTRPDPTRTRKLLLNERELSKLAGSIMRKGYTLIALKMYWKKNRVKLEIGLARGKQEHDKRTSLKEKDWQREKQRLERYSR
SIO_010081: DMP02_RS00875
subclass of: SO_0000673
so part of: DMP02_RS00875
location: 183429..183905
location: region:183429-183905:1
so has part: feature:183429-183905:1:exon

WP_126322235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183429-183905:1:exon

DMP02_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ssrA
locus tag: DMP02_RS00880
so part of: sequence
location: 183994..184397
location: region:183994-184397:1
so has part: feature:183994-184397:1:exon
subclass of: SO_0000659

position:183994:1
position: 183994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184397:1
position: 184397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183994-184397:1:exon

DMP02_RS00880
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 676208
gene: ssrA
locus tag: DMP02_RS00880
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DMP02_RS00880
subclass of: SO_0000673
so part of: DMP02_RS00880
location: 183994..184397
location: region:183994-184397:1
so has part: feature:183994-184397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183994-184397:1:exon

DMP02_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00885
old locus tag: RVIR1_01820
so part of: sequence
location: 184542..185786
location: region:184542-185786:1
so has part: feature:184542-185786:1:exon
subclass of: SO_0000010

position:184542:1
position: 184542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185786:1
position: 185786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184542-185786:1:exon

DMP02_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00885
old locus tag: RVIR1_01820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018577941.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKSEAPMALTVVEVKNAKPREKAYKMADERGLYLLINPNGSKLWKLKYRFAGFEKKLSLGAYPEVSLAAARDVREEARKQLVNNIDPGILKNSIKRSKKLVAENSFETIAREWHTKFTLKWTKEHGSRTLIRLEQNIFPWIGRRPITEVTAPELLSALHRVEKRGAIETAHRILQICSQVFRYAIATGRAERNLSADLIGALAPVKKRHHASITDPVAVGKLLRVIDGYEGFFVTKCALQLAPLFFVRPGELRHAEWSEFDFAKAEWRIPAEKMKMREQHIVPLSTQAITILQELKALTGDGKYLFPSIRSLKRPMSENTVLGALRRLGYTADEMTGHGFRSLASTLLNENGWNRDAIERQLAHAERNNIRAAYNYAEYLPERRKMMQWWADYLDELRMQNERTSLRELEIRLT
SIO_010081: DMP02_RS00885
subclass of: SO_0000673
so part of: DMP02_RS00885
location: 184542..185786
location: region:184542-185786:1
so has part: feature:184542-185786:1:exon

WP_232019579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184542-185786:1:exon

DMP02_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00890
old locus tag: RVIR1_01830
so part of: sequence
location: 185888..186772
location: region:185888-186772:1
so has part: feature:185888-186772:1:exon
subclass of: SO_0000010

position:185888:1
position: 185888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186772:1
position: 186772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185888-186772:1:exon

DMP02_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00890
old locus tag: RVIR1_01830
inference: COORDINATES: protein motif:HMM:NF016533.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside phosphotransferase family protein
translation: MHLPKELIKNILSIYGSIGREWLDNLPNLLSHYAKKWHLTVKDCFNNANFNVVAEVVLENGHAAILKCGVPSKEFINEVAALRHFNGVGSVKLLDAEVGAGIMLLEKLVPGTLLEECSDETQSIIITSVELMRKLHRPCQETTKFPSLANWFQGLQRLYQYFQGGTGPFPKSLIERANTISQELLISIQSPVLLHGDLHYGNILLSDKYGWLVIDPKGVIGEREYEIPFPRLKGEINKTLIKRRLDQFIEISGFDRRRVLGWAFCKAVLAAWWLFEDQGEIWQPFLTCAEILKQ
SIO_010081: DMP02_RS00890
subclass of: SO_0000673
so part of: DMP02_RS00890
location: 185888..186772
location: region:185888-186772:1
so has part: feature:185888-186772:1:exon

WP_126322236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185888-186772:1:exon

DMP02_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00895
old locus tag: RVIR1_01840
so part of: sequence
location: 186880..187467
location: region:186880-187467:1
so has part: feature:186880-187467:1:exon
subclass of: SO_0000010

position:186880:1
position: 186880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187467:1
position: 187467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186880-187467:1:exon

DMP02_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00895
old locus tag: RVIR1_01840
inference: COORDINATES: protein motif:HMM:TIGR00730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00730 family Rossman fold protein
translation: MKSLCVFLGATIPQNQKFLEATLALGKVLAERKVQLVYGGAKVGLMGQLADAVLANGGRVVGVMATVLEGEITHDGLTHLHVTSSLQERKAMMADLSDGFIVMPGGLGTFEEMFEVWNARKIGASKKPLGLLNIDGYFDFTFAQLERGVKEGFVNASHLALIKCCYDPITLLDLVLNDRVAFTEEAGTVPRMNVS
SIO_010081: DMP02_RS00895
subclass of: SO_0000673
so part of: DMP02_RS00895
location: 186880..187467
location: region:186880-187467:1
so has part: feature:186880-187467:1:exon

WP_126322237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186880-187467:1:exon

DMP02_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00900
old locus tag: RVIR1_01850
so part of: sequence
location: 187512..188378
location: region:187512-188378:1
so has part: feature:187512-188378:1:exon
subclass of: SO_0000010

position:187512:1
position: 187512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188378:1
position: 188378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187512-188378:1:exon

DMP02_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00900
old locus tag: RVIR1_01850
inference: COORDINATES: protein motif:HMM:NF012422.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MKGMDLQNHYVLKSADEVNQICTLLQDIGVSYFNYLKIYKDGSRELLTNNAPWIDHFYQNALYLTAGVVDVEHLLPKGYFLWSELDSEDPVYSQGRESFNIDNGVSFVIKRDDVTYLYIFASTKDNVHINNYYVRNIDLFKRFIQHFQDRGADLIKQSAKNRIFLPERQIVTPNRLKDIEVSLETRTAFYKKTEMDKFYLLSASDDLYLTPKQAEVSVYLVAGVTAKQCARHLGISHRTVETYIEEMKQKIFKVLGINLSKDELAIFLKKTGIQDVVFPDRFNKHVEE
SIO_010081: DMP02_RS00900
subclass of: SO_0000673
so part of: DMP02_RS00900
location: 187512..188378
location: region:187512-188378:1
so has part: feature:187512-188378:1:exon

WP_126322238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187512-188378:1:exon

DMP02_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00905
old locus tag: RVIR1_01860
so part of: sequence
location: 188365..189624
location: region:188365-189624:1
so has part: feature:188365-189624:1:exon
subclass of: SO_0000010

position:188365:1
position: 188365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189624:1
position: 189624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188365-189624:1:exon

DMP02_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00905
old locus tag: RVIR1_01860
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLKNNLGLKGWIVCFVASLFFLFEFLQVNMFSSIDPEVMKAYALESTQLGFLSSIYFYSTVVFLLPAGYLLDRFSPKRIILVTLILSIIGIVGFALSYELWLAAVCRCIEGIASAFCFLGCFKISTNWVPKSRLALATGLIMTIAMLGGVLAQTPLMLLVETYGWRDALFIDAMVGAMVGIAILSIVKDSPANKRDTPSLVETINYWYAFKSAASKASNWACGIYTCLMNLPMMLLGAMWGSLFLMQAHSFSRADAATIVSMIFIGTIVGAPIAGWASDFLCKRKVVMWFAALLSLILTVFITYQPHLSKNAELLVFFLLGFISSAQILGYPTAAQNDRIGIPAMSASLVSFTTMSGYIVFMPLFGWVMNISAPHTTINGVAIRVLCGLLELAYSWLLSRFSLYVTLSFLLSLSLFNTP
SIO_010081: DMP02_RS00905
subclass of: SO_0000673
so part of: DMP02_RS00905
location: 188365..189624
location: region:188365-189624:1
so has part: feature:188365-189624:1:exon

WP_172593948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188365-189624:1:exon

DMP02_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00910
old locus tag: RVIR1_01870
so part of: sequence
location: 189884..190807
location: region:189884-190807:1
so has part: feature:189884-190807:1:exon
subclass of: SO_0000010

position:189884:1
position: 189884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190807:1
position: 190807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189884-190807:1:exon

DMP02_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00910
old locus tag: RVIR1_01870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASFSINNKNDMPEDYINKIKFHSKLPEGSVLIYGVSKGNDRQTGDNFQALVDWIIENKSKVLELKIVLSDLLHRFYVGEEEALLWGKKWEEDNAGSINKLNKAKVAYQLINWKTVIETTAYKQAKLDVNDLYDKDKGFVAVVEGLANSHKHKAGFTAAVNYLLEESAAIASLGQGVLTYPSHELNGALHYTLGKLNCGPIYIGHMLIPPKLRYNPKKNLFQSMFKAMCALDQAGHKSTQAKLSFFMQAIKAHEIAKNDSSLFSEELTTLQERCLNETSSHRGGLEKEVVTSNDNKLTNSTLKRYSV
SIO_010081: DMP02_RS00910
subclass of: SO_0000673
so part of: DMP02_RS00910
location: 189884..190807
location: region:189884-190807:1
so has part: feature:189884-190807:1:exon

WP_145985122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189884-190807:1:exon

DMP02_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00915
old locus tag: RVIR1_01880
so part of: sequence
location: 190838..191884
location: region:190838-191884:1
so has part: feature:190838-191884:1:exon
subclass of: SO_0000010

position:190838:1
position: 190838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191884:1
position: 191884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190838-191884:1:exon

DMP02_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00915
old locus tag: RVIR1_01880
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MLNASPNKFIDLVNSTIVSSMLDAFGINYSAFDINGNSIVQNKSMQSTISKGEVIAEKIDQPSWENCKKIMRSLKGELTEEEFKGKYYLSLKQPIIENNQCVGIVIISFDVTEKKQGEIAERAKQIFSMNMAHDIRTPFSAIVGFAQLQAMGVLKTPEEVQNYGKMVSDSGTQVLEILNAGLCALDKNEIDVIKKDKIDLYKFAIEMQALITPSIYMERLDFELNVDKNIGEIVTDKIRLKQILTNLLSNAVKFTPKGKGKVTLSFEKTDKLKITVSDTGIGISEEDHARIFDKFVKIKPSYESPVFTGSGMGLYLTKKYVEELNGKINLISSFGEGSTFQLEIPSLS
SIO_010081: DMP02_RS00915
subclass of: SO_0000673
so part of: DMP02_RS00915
location: 190838..191884
location: region:190838-191884:1
so has part: feature:190838-191884:1:exon

WP_126322241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190838-191884:1:exon

DMP02_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00920
old locus tag: RVIR1_01890
so part of: sequence
location: 192082..192723
location: region:192082-192723:1
so has part: feature:192082-192723:1:exon
subclass of: SO_0000010

position:192082:1
position: 192082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192723:1
position: 192723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192082-192723:1:exon

DMP02_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00920
old locus tag: RVIR1_01890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVNQPADLSLLLETNKIFVKEYENSLLIRLIKSDVMKEKRMRERLLDCIQVFSDYFQKVVMLRYAFCDNPKFLSIAQQHLKEEYGHNVSLQQDRRYRPSVWDPILEATSSWFAWKMMTLDAEEKTVLVHLVLESSAQLFFRQAHQVMDRYQETQYFKIHDEVDEQHEEMGIALLQGLTSEKYQRLKEVQAQGRQMLNVACKQIATLSEERFI
SIO_010081: DMP02_RS00920
subclass of: SO_0000673
so part of: DMP02_RS00920
location: 192082..192723
location: region:192082-192723:1
so has part: feature:192082-192723:1:exon

WP_126322242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192082-192723:1:exon

DMP02_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00925
old locus tag: RVIR1_01900
so part of: sequence
location: 192839..193324
location: region:192839-193324:1
so has part: feature:192839-193324:1:exon
subclass of: SO_0000010

position:192839:1
position: 192839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193324:1
position: 193324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192839-193324:1:exon

DMP02_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00925
old locus tag: RVIR1_01900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598978.1
GO process: GO:0051276 - chromosome organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase small subunit
translation: MKWNLMPVTNETRLPNGLTQRQFAFYNLLIKQMDEMGKMDAKQAAIEAGFSSTNASRIATRLLKKPEGKAYLKSLQVKSIHSATATMDWVMEKLIRVVYAGISDNGTINGKFLKDSLRALSEINKIKGYYAPEKEFYLNMTMDDVQEARARELTIKYTREY
SIO_010081: DMP02_RS00925
subclass of: SO_0000673
so part of: DMP02_RS00925
location: 192839..193324
location: region:192839-193324:1
so has part: feature:192839-193324:1:exon

WP_232019580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192839-193324:1:exon

DMP02_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00930
old locus tag: RVIR1_01910
so part of: sequence
location: complement(193699..194226)
location: region:193699-194226:-1
so has part: feature:193699-194226:-1:exon
subclass of: SO_0000010

position:193699:-1
position: 193699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194226:-1
position: 194226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193699-194226:-1:exon

DMP02_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00930
old locus tag: RVIR1_01910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSLINISASTGELQDHFDLLSCFLNSASMVRGMACDGITRNNSIGSPMPEFWNQHFITVFYLFRHALELAVKALIKEVTGHDVVGHNIQKMWEENIPNYQNVIPEQINKTFTVLAKYHLLNDAQLFRYHADKGGVKLKDMPLIHSDDFDTISGAAWAIRQLVLECIHIKKDLPI
SIO_010081: DMP02_RS00930
subclass of: SO_0000673
so part of: DMP02_RS00930
location: complement(193699..194226)
location: region:193699-194226:-1
so has part: feature:193699-194226:-1:exon

WP_126322243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193699-194226:-1:exon

DMP02_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00935
so part of: sequence
location: 194759..194965
location: region:194759-194965:1
so has part: feature:194759-194965:1:exon
subclass of: SO_0000010

position:194759:1
position: 194759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194965:1
position: 194965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194759-194965:1:exon

DMP02_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKNEVIQFLNFLKKSLNKSEICAIKRTNELIKIRIVKLFSSKTARVLLILLVIIKQHPKGNFICFIL
SIO_010081: DMP02_RS00935
subclass of: SO_0000673
so part of: DMP02_RS00935
location: 194759..194965
location: region:194759-194965:1
so has part: feature:194759-194965:1:exon

WP_126322244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194759-194965:1:exon

DMP02_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00940
old locus tag: RVIR1_01920
so part of: sequence
location: 195116..196039
location: region:195116-196039:1
so has part: feature:195116-196039:1:exon
subclass of: SO_0000010

position:195116:1
position: 195116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196039:1
position: 196039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195116-196039:1:exon

DMP02_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00940
old locus tag: RVIR1_01920
EC number: 2.7.7.49
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse transcriptase family protein
translation: MSIVLSSFYPYKPISRLDSLAKVLSVDVSALEKIASLASSYYRENKLKNNRITYTVLSPLKEIQEKIKKNLLDKVVWAYYLHSYIKKRNTKTNATAHLFKKALFNKDIKKYFDNCKEKHIYNVWSKFFNFTDNVASILTKLTIRNGELPQGSCTSPSLSNLIFWKDEPRLVSEFNKIGLAYTRYADDISVSSKNKKLDKVYIIGKIYGMFSKNGFKPAREKHKIYNSSEKMVVNGQTVNSKNVTLDKKYILKVRSYIYKLEKRINTLTKSEFDIDYQSILGKINYIKQYNKKGLGLESRLNKLLDIF
SIO_010081: DMP02_RS00940
subclass of: SO_0000673
so part of: DMP02_RS00940
location: 195116..196039
location: region:195116-196039:1
so has part: feature:195116-196039:1:exon

WP_126322245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195116-196039:1:exon

DMP02_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00945
old locus tag: RVIR1_01930
so part of: sequence
location: 196184..196426
location: region:196184-196426:1
so has part: feature:196184-196426:1:exon
subclass of: SO_0000010

position:196184:1
position: 196184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196426:1
position: 196426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196184-196426:1:exon

DMP02_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00945
old locus tag: RVIR1_01930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRISSDQHFKLNSLAEEAHVSIEEIASRAIDAFQLKTMEEEQELEILAEAVIESNKKAIKSLKEAHEALQDTLAHFARN
SIO_010081: DMP02_RS00945
subclass of: SO_0000673
so part of: DMP02_RS00945
location: 196184..196426
location: region:196184-196426:1
so has part: feature:196184-196426:1:exon

WP_145985123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196184-196426:1:exon

DMP02_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00950
old locus tag: RVIR1_01940
so part of: sequence
location: 196654..197172
location: region:196654-197172:1
so has part: feature:196654-197172:1:exon
subclass of: SO_0000010

position:196654:1
position: 196654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197172:1
position: 197172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196654-197172:1:exon

DMP02_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00950
old locus tag: RVIR1_01940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACT domain-containing protein
translation: MENLVVVVLGPSESPSIIEEIFRLVAHSGCHIMDARVSTTATHVTMTILIGGAWNTIAKFETVIKKYDNQVLVARTQARTAQPDSFPYTSYIVAPDTSDALIKITEFLAEQEITLYNIQVESYKAPMTEATMLGISVAFGVPATHLVADFREHFIVFCDENNFDVAMEPQKN
SIO_010081: DMP02_RS00950
subclass of: SO_0000673
so part of: DMP02_RS00950
location: 196654..197172
location: region:196654-197172:1
so has part: feature:196654-197172:1:exon

WP_126322247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196654-197172:1:exon

DMP02_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00955
old locus tag: RVIR1_01950
so part of: sequence
location: 197209..197670
location: region:197209-197670:1
so has part: feature:197209-197670:1:exon
subclass of: SO_0000010

position:197209:1
position: 197209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197670:1
position: 197670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197209-197670:1:exon

DMP02_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00955
old locus tag: RVIR1_01950
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035380.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MLVINKPAPDFSVAATNAKAITLSDLIGKNVVLYFYPKDCTSGCTQEGKDFTEHYKKFASLNTVILGISRDTIKLHLKFKSEQQFPFELLSDTDQKVCELYGVLKEKMMYGKKTRGIERSTFLIDKKGVLRREWRGVKVPGHVQEVLQAVGEL
SIO_010081: DMP02_RS00955
subclass of: SO_0000673
so part of: DMP02_RS00955
location: 197209..197670
location: region:197209-197670:1
so has part: feature:197209-197670:1:exon

WP_126322248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197209-197670:1:exon

DMP02_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00960
old locus tag: RVIR1_01960
so part of: sequence
location: complement(197716..198792)
location: region:197716-198792:-1
so has part: feature:197716-198792:-1:exon
subclass of: SO_0000010

position:197716:-1
position: 197716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198792:-1
position: 198792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197716-198792:-1:exon

DMP02_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00960
old locus tag: RVIR1_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MLQLVKTWLSRYILDPELAILWLFLIFIVVVFAVLGKILAPVLVSVVIAYLLQWPISSLEKLRFPKVAAVLSVYISFIGIVVLGIVGLLPLLVRQLSNLIAELPNMAARGQEILLFLPSRYPDYLSATQIQDWILQFKSGLTHFGQWILSASLVYIPNIIAFAIYFVLVPLLVYFFLIDEKKIIAWITQYLPERRRLISQVWREAYAQTGNYVRGKALEMLIVWIVTYLSFALLGLQYAMLLSVLVGVSVIIPYIGAVMVTIPVLIIGSLQWGWSAHFAYLVAIYAIIITLDANVLVPFLFSEAVDLHPVTIIIAVLIFGGLLGFWGVFFAIPLASVMKAILNAVAYKKPVSTKQLNY
SIO_010081: DMP02_RS00960
subclass of: SO_0000673
so part of: DMP02_RS00960
location: complement(197716..198792)
location: region:197716-198792:-1
so has part: feature:197716-198792:-1:exon

WP_126322249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197716-198792:-1:exon

DMP02_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: guaA
locus tag: DMP02_RS00965
old locus tag: RVIR1_01980
so part of: sequence
location: complement(199053..200615)
location: region:199053-200615:-1
so has part: feature:199053-200615:-1:exon
subclass of: SO_0000010

position:199053:-1
position: 199053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200615:-1
position: 200615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199053-200615:-1:exon

DMP02_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: guaA
locus tag: DMP02_RS00965
old locus tag: RVIR1_01980
EC number: 6.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035525.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006177 - GMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing GMP synthase
translation: MTIPQERILILDFGSQYTPLIARRIREQHVYCEIHPYDMPESQIKAFAPKGIILSGGPETVTLESTPRAPKIVFELGCPVLGICYGMQTMAEQLGGKVVACSNREFGYAHAQITEPTELLKEITDKKGNPYLDVWMSHGDHVEQVPPEFIIILNTPNTPIAGMADPKRNFYALQFHPEVTHTQQGKEILERFVDKICDCRPSWTAHNILEHEIAEIKQKVGEEKVLLALSGGVDSTVLAALLHKAIGKQLLCVFVNTGLLRTTDKDSAIQALADDMNISVVKIDASDRFLKALGGITDPEEKRKAIGNLFVEIFEAESTKHPDIAWLAQGTIYSDVIESAGTTTQKAHAIKSHHNVGGLPDTLKLKLLEPLRELFKDEVCQLGLELGLPPELVYKHPFPGPGLAIRVLGEVTPKNIDLVRKADVILQEELRKHNHYDKISQAFCVFLPVKSVGVIGDARQYAPIIAIRAIETIDFMTARWAHLPYALLETISNRIINEVAGISRVVYDVSGKPPATIEWE
SIO_010081: DMP02_RS00965
subclass of: SO_0000673
so part of: DMP02_RS00965
location: complement(199053..200615)
location: region:199053-200615:-1
so has part: feature:199053-200615:-1:exon

WP_126322250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199053-200615:-1:exon

DMP02_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: guaB
locus tag: DMP02_RS00970
old locus tag: RVIR1_01990
so part of: sequence
location: complement(200698..202161)
location: region:200698-202161:-1
so has part: feature:200698-202161:-1:exon
subclass of: SO_0000010

position:200698:-1
position: 200698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202161:-1
position: 202161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200698-202161:-1:exon

DMP02_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: guaB
locus tag: DMP02_RS00970
old locus tag: RVIR1_01990
EC number: 1.1.1.205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005770973.1
GO function: GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IMP dehydrogenase
translation: MKMIPEGLTFDDILLLPNHSEALPKDVSLVTQLTSTISLQSPLISAAMDTVTEAKLAIALAQEGGLGILHKNMPPEIQASEVRKVKNFESGIVRNPITIAPEASIRELLTLMATHFISGIPVVTKDKQLVGIVTHRDSRFEKNLELPVSSIMTPKERLITAKAQASADEITDLLHQHRLEKILLVDEGFHCYGLVTAKDLQKSKEKPLASKDKQGQLRVGAAIGVGPDTKERARVLIEAGVDILCVDTAHGHSQTVIETVRFLKKEYPKMPLIAGNIATAPAAEALAKAGADAVKVGVGPGSICTTRIVTGVGVPQITAIMQVATALKGQAVSIIADGGIRYSGDLCKALAAGADVVMIGSLFAGTEEAPGEIELYQGRPYKTYRGMGSLGAMQQGSSDRYFQANIESSKLVPEGIEGRIPYKGSLQTVIHHLLGGVRAGMGYTGSKNIAELHKQAQFIKLTSAGMRESHVHNVSITKEAPNYFKED
SIO_010081: DMP02_RS00970
subclass of: SO_0000673
so part of: DMP02_RS00970
location: complement(200698..202161)
location: region:200698-202161:-1
so has part: feature:200698-202161:-1:exon

WP_126322251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200698-202161:-1:exon

DMP02_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS00975
old locus tag: RVIR1_02000
so part of: sequence
location: 202527..203327
location: region:202527-203327:1
so has part: feature:202527-203327:1:exon
subclass of: SO_0000010

position:202527:1
position: 202527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203327:1
position: 203327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202527-203327:1:exon

DMP02_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS00975
old locus tag: RVIR1_02000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MFPNYQANSKPLVIAHRGGAGLWPENTLFALQEAAKSGVDLSEIDIHMTRDGVLVAIHDASVDRTTNAKGLVQELTLAEIKRLDAGYQWTNDGGHTFPFRGQGITIPSLNEIFTAFPRQVISLEIKQTDPPIVAALRETINRHGKSKQVLVSAFDARTMKVFRRLCPKIATAASDPEIHRFSRLSRTYLERFSSVKATAFEVPVEAVTARFIKSAHKKNKRVDVWTVNEVEEMERLLALEVDGILTDYPDRLMNVLRTNKPPEISA
SIO_010081: DMP02_RS00975
subclass of: SO_0000673
so part of: DMP02_RS00975
location: 202527..203327
location: region:202527-203327:1
so has part: feature:202527-203327:1:exon

WP_126322252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202527-203327:1:exon

DMP02_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ndk
locus tag: DMP02_RS00980
old locus tag: RVIR1_02010
so part of: sequence
location: 203643..204071
location: region:203643-204071:1
so has part: feature:203643-204071:1:exon
subclass of: SO_0000010

position:203643:1
position: 203643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204071:1
position: 204071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203643-204071:1:exon

DMP02_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ndk
locus tag: DMP02_RS00980
old locus tag: RVIR1_02010
EC number: 2.7.4.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035208.1
GO function: GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO process: GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate kinase
translation: MTTQRTLSIIKPDAVKNDKIGAITMRFEAAGLRVIAAKMEKLTLKQAQDFYAVHKDRPFFNDLVAFICSGPVMIQVLEGPNAILLNRSLMGATDPKQAAAGTIRADFAESIDKNAVHGSDSIETAKQEIAFFFTEAQCFSRA
SIO_010081: DMP02_RS00980
subclass of: SO_0000673
so part of: DMP02_RS00980
location: 203643..204071
location: region:203643-204071:1
so has part: feature:203643-204071:1:exon

WP_126322253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203643-204071:1:exon

DMP02_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rlmN
locus tag: DMP02_RS00985
old locus tag: RVIR1_02020
so part of: sequence
location: 204075..205190
location: region:204075-205190:1
so has part: feature:204075-205190:1:exon
subclass of: SO_0000010

position:204075:1
position: 204075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205190:1
position: 205190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204075-205190:1:exon

DMP02_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rlmN
locus tag: DMP02_RS00985
old locus tag: RVIR1_02020
EC number: 2.1.1.192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034771.1
GO function: GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
translation: MQTITNLLDLNREAMGVFFTELGEKPYRAQQVMQWIHQRGVKDIDAMSNLSVSLRERLKSIVSIELPEVVLDQVSADGTRKWLLRLKDNNCIETVFIPEANRGTLCVSSQVGCALNCSFCSTAQQGFSRNLTVAEIIGQVWIAVRYLAGESLRHDHSVSNIVMMGMGEPLLNFENVVQAMDMMMDDFAYGFSKRRVTLSTSGIVPALQKLSEVSEVALAVSLHAPNDELRNQLVPINKKYPLKELLAVCRDYFKGDSRRRITMEYVMLDGINDQVEHARQLIKILQGIPVKVNLIPFNPFPNTRYRRSPQVTIDKFRDYLLKAGINTITRKTRGEDIDAACGQLVGRVQDRSHRSRQHKIISAVVALSAVS
SIO_010081: DMP02_RS00985
subclass of: SO_0000673
so part of: DMP02_RS00985
location: 204075..205190
location: region:204075-205190:1
so has part: feature:204075-205190:1:exon

WP_126322254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204075-205190:1:exon

DMP02_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pilW
locus tag: DMP02_RS00990
old locus tag: RVIR1_02030
so part of: sequence
location: 205322..206080
location: region:205322-206080:1
so has part: feature:205322-206080:1:exon
subclass of: SO_0000010

position:205322:1
position: 205322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206080:1
position: 206080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205322-206080:1:exon

DMP02_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pilW
locus tag: DMP02_RS00990
old locus tag: RVIR1_02030
inference: COORDINATES: protein motif:HMM:TIGR02521.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV pilus biogenesis/stability protein PilW
translation: MINLAACSIFSRSSISSTGPQAANANVQLGLAYLQSGDMQRAKQKLLLAEQQSPASTESQGAMGYFLESTGNFSQAEAYYRKAVTLNPKSGVAQNNYGAFLCRRGRYAESDQHFLLALQDPSYLNTAQVYENAGLCAMQIPDINKAGTYFTQAITQDPKCAMSWLELGRISYQQKNYPQAQQYLEQYMQLIKDPTPNALWLGAVLARALGNEAEAGYYTLMLQTRFPNSDAYKALMKTPKFKNKQQKKQLYY
SIO_010081: DMP02_RS00990
subclass of: SO_0000673
so part of: DMP02_RS00990
location: 205322..206080
location: region:205322-206080:1
so has part: feature:205322-206080:1:exon

WP_172593949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205322-206080:1:exon

DMP02_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hisS
locus tag: DMP02_RS00995
old locus tag: RVIR1_02040
so part of: sequence
location: 206083..207360
location: region:206083-207360:1
so has part: feature:206083-207360:1:exon
subclass of: SO_0000010

position:206083:1
position: 206083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207360:1
position: 207360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206083-207360:1:exon

DMP02_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hisS
locus tag: DMP02_RS00995
old locus tag: RVIR1_02040
EC number: 6.1.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871803.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MLNKMQAIRGMNDILPEQITAWQKLEAALRMLTRQYGYQEIRLPILEKTELFKRSIGDVTDIVEKEMYTFLDRNNESLSLRPEGTVGCVRAGIEHGLLYNQIQRWWYLGPMFRHERPQKGRYRQFHQFGVEVFGLVQPDIDAELILMTARLWAELGLQNRLSLQINSLGSASAREEYKKNLIEYFNQHQDQLDEVSKRRLQTNPLRILDSKNPELQDLIQKAPQLLNFLDEESDQHFTELQTLLKDAEICFVVNPRLVRGLDYYNKTVFEWVMTEAQGAQNTVCAGGRYDGLVGQLGGHATPAIGFALGLERLIDLLPPLNLSEAQSPDIYFINTGALARQQGLILAEQLRKALPNMSLVLDCSGAGIKSQFKRADKSQARFALILGDDEVKSDTIAFKDLKQKKPQETLQQAELMQKITQVLNS
SIO_010081: DMP02_RS00995
subclass of: SO_0000673
so part of: DMP02_RS00995
location: 206083..207360
location: region:206083-207360:1
so has part: feature:206083-207360:1:exon

WP_126322256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206083-207360:1:exon

DMP02_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01000
old locus tag: RVIR1_02050
so part of: sequence
location: 207357..207992
location: region:207357-207992:1
so has part: feature:207357-207992:1:exon
subclass of: SO_0000010

position:207357:1
position: 207357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207992:1
position: 207992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207357-207992:1:exon

DMP02_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01000
old locus tag: RVIR1_02050
inference: COORDINATES: protein motif:HMM:NF021492.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNELAELEQAERIKGWCREYGVGIMLGIVFAIVGSIGWHYWQQTRENNAVNAAMVYESFVASIQKNNLTTVEAIAKSLLQNYPKTPYASLAALQLAKQAVNQNNLSEAENKLIWVIQHGKSESLRAVARTRLARVLFAENQAERALKMLDEYNDNVAYEPLILEEKGDIFQRLGNLSSALQNYLAAEKLFSESAIDQPLLSMKISNLTKSN
SIO_010081: DMP02_RS01000
subclass of: SO_0000673
so part of: DMP02_RS01000
location: 207357..207992
location: region:207357-207992:1
so has part: feature:207357-207992:1:exon

WP_126322257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207357-207992:1:exon

DMP02_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: bamB
locus tag: DMP02_RS01005
old locus tag: RVIR1_02060
so part of: sequence
location: 208017..209174
location: region:208017-209174:1
so has part: feature:208017-209174:1:exon
subclass of: SO_0000010

position:208017:1
position: 208017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209174:1
position: 209174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208017-209174:1:exon

DMP02_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: bamB
locus tag: DMP02_RS01005
old locus tag: RVIR1_02060
inference: COORDINATES: protein motif:HMM:TIGR03300.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamB
translation: MPKFRHLVVFLLFFLLAACAGLGDDNTPPPAALTSYPFQFQPVPLWSRVTGGGMDKDFLRLGPVIQDSQVFVSNKSGLVTAVTLSNGHKLWQANLKHPTSSSPAVGEGIVVLASMQPQLIALAAESGDLMWRAALPNQVLAPPIINQGHVIVKTVDGKVLAFALKTGQRLWAYNHGAPTLVLRASSMPRIIGNKVLIGFSDGTLTALNLNDGRLLWEHTIAYPQGVTQADQLVDIAADPRLDSKMIYVATYQGKLSAVSLQTGQIQWQRSFSTYSGLTLGKNLYVTDSEGGLWAFDPSTGHLLWHNRLLQNRGLTAPVIMGNNLVVGDKEGYLHWFAQADGRPLARVLVHDSASIVAAPRVAYPLICVLTQQGGLSVWTESALHI
SIO_010081: DMP02_RS01005
subclass of: SO_0000673
so part of: DMP02_RS01005
location: 208017..209174
location: region:208017-209174:1
so has part: feature:208017-209174:1:exon

WP_172593950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208017-209174:1:exon

DMP02_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: der
locus tag: DMP02_RS01010
old locus tag: RVIR1_02070
so part of: sequence
location: 209239..210636
location: region:209239-210636:1
so has part: feature:209239-210636:1:exon
subclass of: SO_0000010

position:209239:1
position: 209239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210636:1
position: 210636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209239-210636:1:exon

DMP02_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: der
locus tag: DMP02_RS01010
old locus tag: RVIR1_02070
EC number: 3.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035257.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MIHEDCELSGNADENSSAKSMTTSLPSIVIVGRPNVGKSSLFNCLTKTRQALVADLPGLTRDRLFGQGVVGSQPYIVVDTGGLSSGKKEGIDALMEQQTQRAISEADYVLFVVDGRAGLTSLDELLAQKLRRLNKNITLVINKGESLNSGLLQSEFALLGLGAAFIISAAHAQGIEALMEKVLAHFPPATKLADQDQNEQESPETTRVKVAIIGKPNVGKSTLLNRILGEERVVVFDLPGTTRDSTAHEFSYRNKLYTLIDTAGIRRKSKTGEGVEKFSVIKSLQAIESCHVVLMIIDAREGISEQDLHLLGFILETGKALIIAVNKWDGLSSEERAQVKKELDRRLQFVSFAKLIFISALHGTGVGNLFTLIQQAYRSATHPLTTSRLTRLLEEAVSTHQPPLSRGRAVKLRYAHPGGYNPPFILIHGQHTRSLPESYRRYLENFYRKALRIVGSPIKIEFRDK
SIO_010081: DMP02_RS01010
subclass of: SO_0000673
so part of: DMP02_RS01010
location: 209239..210636
location: region:209239-210636:1
so has part: feature:209239-210636:1:exon

WP_232019581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209239-210636:1:exon

DMP02_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01015
old locus tag: RVIR1_02080
so part of: sequence
location: complement(210659..211459)
location: region:210659-211459:-1
so has part: feature:210659-211459:-1:exon
subclass of: SO_0000010

position:210659:-1
position: 210659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211459:-1
position: 211459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210659-211459:-1:exon

DMP02_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01015
old locus tag: RVIR1_02080
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035849.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dam family site-specific DNA-(adenine-N6)-methyltransferase
translation: MKSFLKWAGNKYRIIEHIKGCLPTAARLIEPFIGSATVFLNTCYPAYLLADSNHDLIQLYLYLQQEGQSFINYCRIFFNPCFNNAEEFYRLRRLFNDSKDNRIRAALFLYLNKHCFNGLTRFNQQGQFNTPFSEYKNPYFPEKEMQFFYQHAKNAKIIHADFSTTLVLAQQGDVVYCDPPYVSLSKTANFTHYTADGFSQTQQISLANTAKNLASRGIVVIVSNHDTEFIRNIYQGAKFIALSVQRNISSNGAKRTKASEILAIFQ
SIO_010081: DMP02_RS01015
subclass of: SO_0000673
so part of: DMP02_RS01015
location: complement(210659..211459)
location: region:210659-211459:-1
so has part: feature:210659-211459:-1:exon

WP_126322259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210659-211459:-1:exon

DMP02_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01020
old locus tag: RVIR1_02090
so part of: sequence
location: 211664..213868
location: region:211664-213868:1
so has part: feature:211664-213868:1:exon
subclass of: SO_0000010

position:211664:1
position: 211664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213868:1
position: 213868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211664-213868:1:exon

DMP02_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01020
old locus tag: RVIR1_02090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEDPFFIKRWSYVLSNHPSKRVEQPPGAIKRVLGSYFGPVDQFVATPLANANVLENIFGYNLFTAINNSRYAAVWHGALAGVGLLALLIGHIALVYRTLRNDEKKSHFFYLRRLLQIDPVDPNLEIKKMMGEDGIDYKILIAAAYFYSPDISWLVCWKRRFFCWGKRRKEYDLLMNYLTKEGLERRKTKKEILNSIFIQTIDELVKYLNKKTAAPDLPKKFQRKDGTYLIGFSKEYSKIFFSEEIDPPKNFKKNVSLTQSILDAIEEASFFYWLCMFAFYFAPTVGMVAGLSFPPLALAFLFLTIRCVYVTYAFKKDSINKQIGMLNNTEVDYLEKVALKRKYESDDIELEKQNIFVREQLAMGRVELKSFKNSKLRKDLLNVLGNRRFMKVAAIVEAFVGGCFLPFFGIWLFSDLFKVVAGLAIGGAVTGPTAPAIFGVIFMVIATATLLWGLCYGAKKAIAAGKAQDEKYEQLEKEVNKLDTFSVEKTIKVLDLSLHDYDRFFRRYSLKQPAWTWVKKLLNRSWVVISRLGTGSLVFRLVIWGSITSFVRVPVVWIAPISVPFIAVFAVAFAVWYSHVYNVEKKWKKAENITNHFYLSRMVAVKEMAHKKVSLGKKEELCTDSFLVPQSLPSSKSEECLNAQNMDNMGLIKLHSNDSGNTSPDRAKAKISFNSPREAAGGEASDSRPLNLNYLPIRGRASSFTEGFGSRKGKNDLSSSPDLNPQGMVCHRS
SIO_010081: DMP02_RS01020
subclass of: SO_0000673
so part of: DMP02_RS01020
location: 211664..213868
location: region:211664-213868:1
so has part: feature:211664-213868:1:exon

WP_126322260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211664-213868:1:exon

DMP02_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01025
old locus tag: RVIR1_02100
so part of: sequence
location: complement(213833..214633)
location: region:213833-214633:-1
so has part: feature:213833-214633:-1:exon
subclass of: SO_0000010

position:213833:-1
position: 213833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214633:-1
position: 214633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213833-214633:-1:exon

DMP02_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01025
old locus tag: RVIR1_02100
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF016340.2
GO function: GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTPFKKSFIAVTAIEPQQQLAAQKLAKQYFLPYIDSSQQENFAFILILSEKGLMLKNTEQKAWGSLQIDFLKGTIGYRLRHLKGQKQLLAKAIGSKTHLKTGILDLTAGLGNDGFIFAQLGFSVTLLERSPIIAALLQDGLDRALNDKKYSASNIQLIHSEAKIYLNQIDTEKLPDIIYLDPMYPPSNKSALVKKEMRFLRQIVGDDTDAQTLLPLALTHARKRVIVKRARSAPFLSTLKPQHSIFGKQLRFDIYLTPMTYHTLGI
SIO_010081: DMP02_RS01025
subclass of: SO_0000673
so part of: DMP02_RS01025
location: complement(213833..214633)
location: region:213833-214633:-1
so has part: feature:213833-214633:-1:exon

WP_126322261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213833-214633:-1:exon

DMP02_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01030
old locus tag: RVIR1_02110
so part of: sequence
location: complement(214630..215187)
location: region:214630-215187:-1
so has part: feature:214630-215187:-1:exon
subclass of: SO_0000010

position:214630:-1
position: 214630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215187:-1
position: 215187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214630-215187:-1:exon

DMP02_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01030
old locus tag: RVIR1_02110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MTGLALFLREAITHPNAVGALFPSSKKLANALAQQIPANNPGLIIELGAGTGAITAALLHQKKPEHQLIAIERSAKLAKHLAARFPGLNIIQGDAGHLHQLLSKHTSSPVQAIVSSLPLRSLASDTIKKIGQEINQTLKQGGIFIQYTYSLWGKTLTPSSNLKLIHNQWIWQNLPPARIDVFYRQ
SIO_010081: DMP02_RS01030
subclass of: SO_0000673
so part of: DMP02_RS01030
location: complement(214630..215187)
location: region:214630-215187:-1
so has part: feature:214630-215187:-1:exon

WP_126322262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214630-215187:-1:exon

DMP02_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hisC
locus tag: DMP02_RS01035
old locus tag: RVIR1_02120
so part of: sequence
location: complement(215347..216399)
location: region:215347-216399:-1
so has part: feature:215347-216399:-1:exon
subclass of: SO_0000010

position:215347:-1
position: 215347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216399:-1
position: 216399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215347-216399:-1:exon

DMP02_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hisC
locus tag: DMP02_RS01035
old locus tag: RVIR1_02120
EC number: 2.6.1.9
inference: COORDINATES: protein motif:HMM:TIGR01141.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MTITQQKRAYPDKTQAGPIRLDHNENPLGPSPLAIKAAQQALLNCHRYPDNHGSALKISLATHLSISPDLITLGNGSEGLLELLSNTYLTTKNSAVLPNYSFIGIKKIIQHTGTQLRIATNTYQYTTTEHILAAVEPTTKIIFIVNPNNPTGTYISSLDLNRLLEQLPSHIFAVIDEAYAEYVEDTDYPNTIKFLSTYPNLIISRTFSKFYGLAGLRLGYLISHPKIAKHLNSLCLPFSVNSIALAAAQASLYDHAHMKLSLAVNQQGRKQLMQGLKKLSLTMIPSHTNFICVNLQKNSLAIYKQLVSDDIYVRPLYDYELPNHLRISIGLKDQNQRLLEALYKILPQEL
SIO_010081: DMP02_RS01035
subclass of: SO_0000673
so part of: DMP02_RS01035
location: complement(215347..216399)
location: region:215347-216399:-1
so has part: feature:215347-216399:-1:exon

WP_126322263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215347-216399:-1:exon

DMP02_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01040
old locus tag: RVIR1_02130
so part of: sequence
location: 216641..217432
location: region:216641-217432:1
so has part: feature:216641-217432:1:exon
subclass of: SO_0000010

position:216641:1
position: 216641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217432:1
position: 217432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216641-217432:1:exon

DMP02_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01040
old locus tag: RVIR1_02130
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MLLCLDIGNTHMLGGVFEQGRKKDKLIFRFRYATSLLGSADQFGIFLISILKVHGLNPAKIAAIALSSVVPNYDYTLKHCFSQYFKEAQCFLLQPGIKTGLNIRCKNPNEVGADRIANAIGAIAVFPEKSLIVVDMGTATTLCAIRANRDYLGGAILPGMRLCMEALKNNTAKLMAVNIEEPVSYIGKTTRESIQSGLYYGHLGALKELILGFKKEVFSGEEVKVIGTGGFSQLYEGKELFDILIPELVLLGLKKAFEYTSDH
SIO_010081: DMP02_RS01040
subclass of: SO_0000673
so part of: DMP02_RS01040
location: 216641..217432
location: region:216641-217432:1
so has part: feature:216641-217432:1:exon

WP_126322264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216641-217432:1:exon

DMP02_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01045
old locus tag: RVIR1_02140
so part of: sequence
location: complement(217452..218300)
location: region:217452-218300:-1
so has part: feature:217452-218300:-1:exon
subclass of: SO_0000010

position:217452:-1
position: 217452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218300:-1
position: 218300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217452-218300:-1:exon

DMP02_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01045
old locus tag: RVIR1_02140
inference: COORDINATES: protein motif:HMM:NF014724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcF family protein
translation: MDLFSYLINISLIYLLQLREKINVYAIYFSTFIVIFLLLLLTILFGVFCYKKLNFLTGLITLFIFLLIGNGFIPFYLLKSLQIYKEPQIIKWKKSNTIVVLGAGTSKPVGSDETKPSLMAFSRITTAATLYHNCKINSSHCHILISGGDPQHNGKTEAATYRETLINLGIKDSDIQLEPDSKNTFQNTKFISTLLEQQPSNQILLVSSGLTLRRALLYFSYFNIYPIPVASDFITIPFSKFPLAYNLAINDFAVHEIIGIAQFYIYNFFGWDENKTIINKNS
SIO_010081: DMP02_RS01045
subclass of: SO_0000673
so part of: DMP02_RS01045
location: complement(217452..218300)
location: region:217452-218300:-1
so has part: feature:217452-218300:-1:exon

WP_126322265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217452-218300:-1:exon

DMP02_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01050
old locus tag: RVIR1_02150
so part of: sequence
location: 218395..220275
location: region:218395-220275:1
so has part: feature:218395-220275:1:exon
subclass of: SO_0000010

position:218395:1
position: 218395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220275:1
position: 220275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218395-220275:1:exon

DMP02_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01050
old locus tag: RVIR1_02150
inference: COORDINATES: protein motif:HMM:NF016099.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IucA/IucC family protein
translation: MQMQEIASQQVKLFEKEKVYRDNDNFFLSEDMLEVNKNSLRQLLLAFLREKIFPYRYQNNNLIFDFSHSNYFLYVNNVKLFSLLRFTSFDTLVLINKENFSRQFITDPLMLLEIVKLELEKTLNLDQWSKVYNEIANHLQNAVLSNREKLKLKGDVFSEKNKKKHYNTLSYVFYLYKNIKNASLRFEQIAAFNGHPYHPCAKTKLGFSIEDVFKYSPEFSPKVCIYLSAVHKNYLHVEKSKEKPNFRHWFAKYYPNIFEEWLTELHKLDLNVNDYLPFPVHPWQAKHVIHDLFADDIQEKIILLFKNVTISMSPTLSFRTLSPIEYLNAPYVKLSVAVQATSVVRTITNASTENTPKITSILEEILIKENNFSDRLFILPEYYGLHLKNIHEEKSKNFTVIFRENINNYLQENETAIVVATLFEKISPNNRSFFVELVQTAGCLNYEDALDYFYNYVDIVLGGYLDLYLIYGIALEGHQQNTLALFQDASIKRIIARDFAGIRVHGPTLEARGFKYKAYPGSPTLTENKSIVRNQLLYTAYQIHLGELILLLAEFFSCDEACFWDIVRNVSCQRFEQLKGRLEKSVWDEEYNAILKENWSLKALLRMRLEKTKHSLFSSISNPLFV
SIO_010081: DMP02_RS01050
subclass of: SO_0000673
so part of: DMP02_RS01050
location: 218395..220275
location: region:218395-220275:1
so has part: feature:218395-220275:1:exon

WP_126322266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218395-220275:1:exon

DMP02_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01055
old locus tag: RVIR1_02160
so part of: sequence
location: 220279..221460
location: region:220279-221460:1
so has part: feature:220279-221460:1:exon
subclass of: SO_0000010

position:220279:1
position: 220279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221460:1
position: 221460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220279-221460:1:exon

DMP02_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01055
old locus tag: RVIR1_02160
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MEIEKDLWYLQVRLVVFSQFIIILALDMSDPYWPLILSSFHLFNPRSLQYWSGAIYMAPLLTTILTTLLWTKIGEFIGYKKMILRAGFALAATQWGLFFFANPWAIFTIRLIQGGLAGFTAAAQAWSLSITPTNTHSQIVGRLQAATAMGSIVGPICGGIISHYYGYLSIFISAGCVCLLLSFVLANFLKENPLQSIRASVSSRQKRFFLDEGKQNLLLLLICSTQAARWMSAPFFALYVAEQLHADNLTLGFIYATMALTMSLTTSILGRIIDNKPGQYGGIGLLIVALLLSGLAQWGFAFISKSYLAFAVSLFWGISLGIISLLLFSFLLKGIGDESRAKAVGLGNTALKLGNLIGIMMGTLIQAEGHFMLSFAVIGGVYFFLAILAGCYK
SIO_010081: DMP02_RS01055
subclass of: SO_0000673
so part of: DMP02_RS01055
location: 220279..221460
location: region:220279-221460:1
so has part: feature:220279-221460:1:exon

WP_126322267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220279-221460:1:exon

DMP02_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01060
old locus tag: RVIR1_02170
so part of: sequence
location: 221471..221860
location: region:221471-221860:1
so has part: feature:221471-221860:1:exon
subclass of: SO_0000010

position:221471:1
position: 221471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221860:1
position: 221860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221471-221860:1:exon

DMP02_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01060
old locus tag: RVIR1_02170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GtrA family protein
translation: MKALFWQFSRFFIVGASSALVQFSILIGLVELFSVKPIVASTLGYLGGALINYLLNHYFTFKSTLPHRQAVLRFSINSLFGLFVNFVMMAFLLRHYPYVLSQVLTSMVVLIWNFLIHRYWTFHSKKKVI
SIO_010081: DMP02_RS01060
subclass of: SO_0000673
so part of: DMP02_RS01060
location: 221471..221860
location: region:221471-221860:1
so has part: feature:221471-221860:1:exon

WP_126322268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221471-221860:1:exon

DMP02_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01065
old locus tag: RVIR1_02180
so part of: sequence
location: 222251..222949
location: region:222251-222949:1
so has part: feature:222251-222949:1:exon
subclass of: SO_0000010

position:222251:1
position: 222251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222949:1
position: 222949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222251-222949:1:exon

DMP02_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01065
old locus tag: RVIR1_02180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKKIKVLLSCFLQRHYIGTESAKKGGEIWKRENEAALTCLDKGTVYEISHWNEWVNHPDYEITYAEVISLHESNDAFKTIIGNLVKRHAPKADEASAKNYLFEECTVFILLKNAHVSYPSNELNAAVDFVTRYFKTNIHYHGYAFYSKAETSLSRKKVPAGKPSSSHAVFLEEEKAIKEEVLKLASKLESIGIVGKSKQITFFKKALSNTSLEGVATTNQEEVKHASPRK
SIO_010081: DMP02_RS01065
subclass of: SO_0000673
so part of: DMP02_RS01065
location: 222251..222949
location: region:222251-222949:1
so has part: feature:222251-222949:1:exon

WP_126322269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222251-222949:1:exon

DMP02_RS07300
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07300
pseudo: true
so part of: sequence
location: 223563..223997
location: region:223563-223997:1
so has part: feature:223563-223997:1:exon
subclass of: SO_0000010

position:223563:1
position: 223563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223997:1
position: 223997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223563-223997:1:exon

DMP02_RS07300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07300
inference: COORDINATES: protein motif:HMM:NF014567.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: DMP02_RS07300
subclass of: SO_0000673
so part of: DMP02_RS07300
location: 223563..223997
location: region:223563-223997:1
so has part: feature:223563-223997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223563-223997:1:exon

DMP02_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01080
so part of: sequence
location: 224411..225304
location: region:224411-225304:1
so has part: feature:224411-225304:1:exon
subclass of: SO_0000010

position:224411:1
position: 224411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225304:1
position: 225304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224411-225304:1:exon

DMP02_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTSHFPPPRLSVNVYASNHAVAQTDLMLSLQGDSTHNLYINPVLSYATNSQGELDVGLGYRWIPNKAVIYGGYLFGGYSRINNNARLYIINPGVEILASRWDTHLNVYIPAGDRHYIVGSDAGLPYFSGHSERVNIFQADQYVGCGGDIKFGYQLFPNSSWKGYLGSYFFTPAQSNNIWGGAVGLEYWLDSYLKVMGSYTYDKLHQSTYAIGLGLEFGGTHRYRANPTLEERMTDPVERHLAELGQGSFIPAHTNKQFLGAQEMPWNIPTPTPDPIPTPIPDPTPILDPIPIPDPK
SIO_010081: DMP02_RS01080
subclass of: SO_0000673
so part of: DMP02_RS01080
location: 224411..225304
location: region:224411-225304:1
so has part: feature:224411-225304:1:exon

WP_126322271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224411-225304:1:exon

DMP02_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01085
so part of: sequence
location: 225306..226154
location: region:225306-226154:1
so has part: feature:225306-226154:1:exon
subclass of: SO_0000010

position:225306:1
position: 225306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226154:1
position: 226154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225306-226154:1:exon

DMP02_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRSNISKSTMWVYKGGNGLVLANCTFENPCGPTDLTDAGASQLNNLLPNTVMYFNGGNYNALNVPGGTSPVTLQMGQSIHSRTADYSHPVSGTERSIFNGAFILPGNNTLDSITLLSTTDTADDTGVLINGGNNNVINNSQIGNTRNTFTLGIVDNGQNTIINNSDIFSSKYALNMNGTSSSVLNSRVTAKGRNATGIYFYKNKTSNFVKNTQIQVIDGSGVPSGIYADGSSVEVQDSIIQASGSRVRGIVSSYSSTISIKNTQIHRRVTSTRGEINYVTL
SIO_010081: DMP02_RS01085
subclass of: SO_0000673
so part of: DMP02_RS01085
location: 225306..226154
location: region:225306-226154:1
so has part: feature:225306-226154:1:exon

WP_126322272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225306-226154:1:exon

DMP02_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01090
old locus tag: RVIR1_02210
so part of: sequence
location: 226167..227153
location: region:226167-227153:1
so has part: feature:226167-227153:1:exon
subclass of: SO_0000010

position:226167:1
position: 226167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227153:1
position: 227153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226167-227153:1:exon

DMP02_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01090
old locus tag: RVIR1_02210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012979137.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MWWIRLSHNGKRIQRSTGTSNKLAAQELHDQLKADLWRQVKLGEKPERTWQEAVVKWLKVSAHKRSLNHDKFNLAWLTPYLRNKKLSEIDNQMIEEIATIRESQGVASATVNRLLALIRSILQKAEREWKWIDKVPVVSMRYEGEERERWLSKTEAMRLIKELPSHLADLVTFSLATGLRQANVLNLRWKDVDLDKRHAVIPASQSKTKISIAVPLNADAISILRKQLFKHSEFVFTYKNVPIKQCNTKAWKKALKRAGIENFRWHDLRHTWASWHVQNGTSLQELQQLGGWTSFKMVLRYAHLNSDQLKRAAERIAGTNLVQVPLQG
SIO_010081: DMP02_RS01090
subclass of: SO_0000673
so part of: DMP02_RS01090
location: 226167..227153
location: region:226167-227153:1
so has part: feature:226167-227153:1:exon

WP_126322273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226167-227153:1:exon

DMP02_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01095
old locus tag: RVIR1_02220
so part of: sequence
location: complement(227411..229918)
location: region:227411-229918:-1
so has part: feature:227411-229918:-1:exon
subclass of: SO_0000010

position:227411:-1
position: 227411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229918:-1
position: 229918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227411-229918:-1:exon

DMP02_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01095
old locus tag: RVIR1_02220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPNTNISVADSAEQLLQRNPLLYRWVTNCFSIVKIKSNIWTPEWIESLQIALKKANSETIKQGYKLLTEEFNSKLGQPYSTNENSQNDWVSALLLQLLAMDVYRKTATECCHDQLMECPSMRWTNYANRVITIVPKEVYLKQLSRLVGEAVSKKPIDSTVDYVLLQIHQHALKFCFKRFLNGLRHTTQDSPPPDEENSAYQSYIQMICMLHVYITRVSNLPLKEKERLPNLLLEQLKQLIEETCELDLSPSWMERLRQWIQQFFGKLKLLYTTIPSTVETSSSALLIISQQLRKSAKQAAQKKESHSSELIRERCWLYFSLYEQIITQYWDKEKYALSYQSTTLALFESFMSTFAFEPPSTFEKGILRANPLKSQGFFTFSRKKVTPEHLECLLDTALNKLCVDFINNWFYHDYSANKGSISLLHWLIFRQEPRLMAKIKAYASTEDYTQFRGLAEIPSFEKETLYRFVQNAHKDFCIDLNLMTRMIVSIWLKKIGVSVSHYYLANSLLKPERWLYQTNPVASVPWKDTIPNLAWVLLHAVERLGVGLYFFPPIQQRWSVFQEARTEHSGSIAEFVYQQDKQIAAILNKLFLTFHLDHESEAKRNDPMLKDWAQNYIPYIKSAKQTLRKFRARDPNELQSLDAKKEAESLLNELKDIVLYCMHCDVKYVRCMLEDDPDISSKLSELRQLHVERSRTRKEIEEINKRTEEICKETKEIRKETKEIRKETKEIRKETETERKEKEAAQAREQEERKEKEAAQAREQEARKEKEAVQAEIEHLKALLAEQEGQIQPQPSIVGSRGILFHAATTSQASTTAAQDTEKAGSSNSAFPNR
SIO_010081: DMP02_RS01095
subclass of: SO_0000673
so part of: DMP02_RS01095
location: complement(227411..229918)
location: region:227411-229918:-1
so has part: feature:227411-229918:-1:exon

WP_126322274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227411-229918:-1:exon

DMP02_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01100
old locus tag: RVIR1_02230
so part of: sequence
location: complement(229908..232892)
location: region:229908-232892:-1
so has part: feature:229908-232892:-1:exon
subclass of: SO_0000010

position:229908:-1
position: 229908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232892:-1
position: 232892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229908-232892:-1:exon

DMP02_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01100
old locus tag: RVIR1_02230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIDKITAFTTVKIAWEILEILHFMHVGHIAGKASYKGGSSVKHAMQHCYQEWQDKKDPTQRRMRKAETPYDFKAIGDTTQAINDINTQVEAYLAKLNSSVENLQQAKDCFSDIHDILTKLVNALKSNSDDQFSNLLLQLKSKFISFKDEFDKFSFSIKPPPRQLLYVADLDGNKMGVINQYNNRLQTMKDYFDLLEETEQKIANQFKKGFNAIPTLLPSTSSSSIYSPEQLQQAITQCIDSPKNTSETMLAIFKNDTELAITCADIVKLFASFQKIHKTMQTISLEDDPAWFCLLTDEKEIEEVGQRIFLHAMNEAKISDKDKLLIAKIFLRKPVPTHLMKQIEVDELAYEMADILRRWQIEKCEQLTQFLSTLTKEGVPLPSRKQDPDGRLEWELLEWLKTQREEQHSIDLFKTILVSPCCFSQCSIESARTQLKDLSLAENIDILIQKHLTSHWGAIWEKSDNLIQLPLKFKTDILPTDRMKPDTSEKPNVVSSVIQELATKLMTDLEKLKVELVKSRPKYSKKLKEFNPEKEQAIAIQKDQEHENGVERIKQLQSSIQDIDSSLDSSLAHYLYQPKAINPIDKARQVPTIDDLSYVIYKGVDPNSICQWKTHYQNVPQNDKLMHYFTPDQQQDETRAKAWLYACTICQVNAMPAFSHLFTTDRLLALENTPESQAAIKNTLSIQVFFKDPKKILSIATNSKALNGVTPKTVEETETAFQQLQDYYVLALVRVHPEYRNQLPFGEQLKCLVKNLFKVGQEIGKNRLEHVQVYMGDLCAVLSGEHVEAINTAITKLNENYNSLCATAKRAHKSQLYAIMDKAIKGPIAEIKRQMGGLSKEMPKTPSDLNSTVKQVEEKKETFKELENERKEKEAAQAREQEERKEKEKEREEKEKEREEKEKEREEKETERKEKEAAQAREKEERKEKEAAQVREQEAQAEIERLKALYAELKKQVPPQPIATGSRATLFPAPQATNTMPENPVLPENSYAP
SIO_010081: DMP02_RS01100
subclass of: SO_0000673
so part of: DMP02_RS01100
location: complement(229908..232892)
location: region:229908-232892:-1
so has part: feature:229908-232892:-1:exon

WP_126322275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229908-232892:-1:exon

DMP02_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01105
old locus tag: RVIR1_02240
so part of: sequence
location: 233219..234058
location: region:233219-234058:1
so has part: feature:233219-234058:1:exon
subclass of: SO_0000010

position:233219:1
position: 233219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234058:1
position: 234058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233219-234058:1:exon

DMP02_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01105
old locus tag: RVIR1_02240
inference: COORDINATES: protein motif:HMM:NF014609.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PhzF family phenazine biosynthesis protein
translation: MNIKIINVFSYNHQGGNPCAIVDNAIAFSEEAMQKKATELNLPETVFIIPDKNQYFLRFFATKGELPLCCHGTLGAVFYLFKSNVNQRPNIKTYKDNIKIDVKYENDLVSMSIANKGKVLNTPIDLSVISTMLNIEKESLAKALPCTVASIGSPKLFIPLINRAALFDMKPDLDLVSQWCKDNAINGLYAYSSDVENPNSDYVGRNFNPLFSHQEDIATGTAAAALCQMLCRSRRQSEGTFTIEQGANLGSPSKIYISISKDNIEIKGEAYFSDSEAYI
SIO_010081: DMP02_RS01105
subclass of: SO_0000673
so part of: DMP02_RS01105
location: 233219..234058
location: region:233219-234058:1
so has part: feature:233219-234058:1:exon

WP_126322276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233219-234058:1:exon

DMP02_RS07170
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07170
so part of: sequence
location: complement(234089..234325)
location: region:234089-234325:-1
so has part: feature:234089-234325:-1:exon
subclass of: SO_0000010

position:234089:-1
position: 234089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234325:-1
position: 234325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234089-234325:-1:exon

DMP02_RS07170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYYITQEGESKDFKEFYSALAEALPNYREDVMTLAQELKQEGIYEVAKNLLAEGMPMELVKKVTKLPDLDLIELEKA
SIO_010081: DMP02_RS07170
subclass of: SO_0000673
so part of: DMP02_RS07170
location: complement(234089..234325)
location: region:234089-234325:-1
so has part: feature:234089-234325:-1:exon

WP_145985124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234089-234325:-1:exon

DMP02_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01110
old locus tag: RVIR1_02260
so part of: sequence
location: complement(234339..234935)
location: region:234339-234935:-1
so has part: feature:234339-234935:-1:exon
subclass of: SO_0000010

position:234339:-1
position: 234339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234935:-1
position: 234935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234339-234935:-1:exon

DMP02_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01110
old locus tag: RVIR1_02260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVPRADGYDDYLPIVNTKKGFIYYDGDVGKVYPAIYSEPSVGELLCIGTRYLRTSYSQEDIPYARVAKRLWNDKAGYYRFGTATSFVSTNLNTNQLILTTNRAGEAKTSSAETSGFTVEGIFKGNDYEVNAFLSSDYPNRIYVQGKTNAGVAAPDAKTSGFKIVPLRNHALVKHPSKRCIRIYKGYRFTDSPEAPDT
SIO_010081: DMP02_RS01110
subclass of: SO_0000673
so part of: DMP02_RS01110
location: complement(234339..234935)
location: region:234339-234935:-1
so has part: feature:234339-234935:-1:exon

WP_126322277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234339-234935:-1:exon

DMP02_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01115
old locus tag: RVIR1_02270
so part of: sequence
location: 234994..235839
location: region:234994-235839:1
so has part: feature:234994-235839:1:exon
subclass of: SO_0000010

position:234994:1
position: 234994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235839:1
position: 235839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234994-235839:1:exon

DMP02_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01115
old locus tag: RVIR1_02270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597303.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase
translation: MTKLPDVKIKSVKETSNTLFDDLSVKEIADFLGQFTNKSSNRYRRFLALIFRYAIANGLCKENPALQTIAHKVKWKRERLTLGSYFAIYSHPLAEPWFKNAMELGLHTLQRREDLVNLKFSDIKEGYLYVIQSKTEKHGESAYLKIKITPILESGIGRCRDLIVSPYILHRRPDRCSKQNYKAESKQHFSQITPDYLTKTFAYIRDQLPEFKSIPTDQRPSFHEIRSLGIAEYEKNGIDAQALAGHKTRAMTDKYKEGHEPKWTEVEAGLKLTCVTTEKQA
SIO_010081: DMP02_RS01115
subclass of: SO_0000673
so part of: DMP02_RS01115
location: 234994..235839
location: region:234994-235839:1
so has part: feature:234994-235839:1:exon

WP_232019582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234994-235839:1:exon

DMP02_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01120
old locus tag: RVIR1_02290
so part of: sequence
location: complement(236217..236735)
location: region:236217-236735:-1
so has part: feature:236217-236735:-1:exon
subclass of: SO_0000010

position:236217:-1
position: 236217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236735:-1
position: 236735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236217-236735:-1:exon

DMP02_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01120
old locus tag: RVIR1_02290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKIFHSKDKYKINVLVLGNDGCGKRSFVCMYKDKLFSHRLTFPAKAFSVKEAIDGEIFQINFTLERSPDTYNLSAKNKPSQFDLILIMADLSSINFNNDLDYWQRFSDIHFPSIKKISLGTKSDVKLVQNDASNVISTSAKTRNGFEHFKSKFHALVTEQKPSMFAKPRQR
SIO_010081: DMP02_RS01120
subclass of: SO_0000673
so part of: DMP02_RS01120
location: complement(236217..236735)
location: region:236217-236735:-1
so has part: feature:236217-236735:-1:exon

WP_126322278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236217-236735:-1:exon

DMP02_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01125
old locus tag: RVIR1_02300
so part of: sequence
location: complement(236791..238101)
location: region:236791-238101:-1
so has part: feature:236791-238101:-1:exon
subclass of: SO_0000010

position:236791:-1
position: 236791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238101:-1
position: 238101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236791-238101:-1:exon

DMP02_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01125
old locus tag: RVIR1_02300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDITLLEKETQIPKEKLEAFRALDSKLNNSEDSDLDISAIQTIIVESLGDMETNKKLDLIAPYSRRDTGIGGKTMGIIKDISYRTRHLNKISNDLDTIYTRFEQGKLGVKLESDERITLAQYGILYDLAHLNKYLEEMNHLGLINGNETLEKLFSQTQKAKNIIQYLDDTFDQSFKMPTGSVVFNNTSDQALIYQKHYSFFEKIINFFITKFSHSSKGVFSKKNNKISHINPTYKEEKLTVRNYLYSDIYKIKLETMISPSIQKILKEKLGNDWLKQLEHKHEIIEKKLHDQAREEHIHITANGSVNTKVKIATIWLQGGHKNSFFANHSNKDIRDNFFGRGAWENNKRKQTKLLCSEFVGMSLIAVIQELNDQVIEELKAKGVEGLPQTIIKNPISQREKLHLLTPERLLVTMQKRGIVEKVETPPEISRFISR
SIO_010081: DMP02_RS01125
subclass of: SO_0000673
so part of: DMP02_RS01125
location: complement(236791..238101)
location: region:236791-238101:-1
so has part: feature:236791-238101:-1:exon

WP_126322279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236791-238101:-1:exon

DMP02_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01130
old locus tag: RVIR1_02310
so part of: sequence
location: complement(238117..238374)
location: region:238117-238374:-1
so has part: feature:238117-238374:-1:exon
subclass of: SO_0000010

position:238117:-1
position: 238117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238374:-1
position: 238374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238117-238374:-1:exon

DMP02_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01130
old locus tag: RVIR1_02310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVLKLSTTNLEKIIDKIIIALPERQFHNASPIMSQDILSFIAKNFIFFQAQEDLNSDGYEQNLLSFIGCLSDQIDQRYFPKQPI
SIO_010081: DMP02_RS01130
subclass of: SO_0000673
so part of: DMP02_RS01130
location: complement(238117..238374)
location: region:238117-238374:-1
so has part: feature:238117-238374:-1:exon

WP_126322280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238117-238374:-1:exon

DMP02_RS07180
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07180
old locus tag: RVIR1_02320
so part of: sequence
location: complement(238790..238960)
location: region:238790-238960:-1
so has part: feature:238790-238960:-1:exon
subclass of: SO_0000010

position:238790:-1
position: 238790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238960:-1
position: 238960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238790-238960:-1:exon

DMP02_RS07180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07180
old locus tag: RVIR1_02320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPRKPTRTLEDQKKIVHMNFETTKELRNAFKSKVAISGKSVRQVLEELMKEYIKK
SIO_010081: DMP02_RS07180
subclass of: SO_0000673
so part of: DMP02_RS07180
location: complement(238790..238960)
location: region:238790-238960:-1
so has part: feature:238790-238960:-1:exon

WP_172593951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238790-238960:-1:exon

DMP02_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01135
old locus tag: RVIR1_02330
so part of: sequence
location: 239282..239488
location: region:239282-239488:1
so has part: feature:239282-239488:1:exon
subclass of: SO_0000010

position:239282:1
position: 239282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239488:1
position: 239488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239282-239488:1:exon

DMP02_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01135
old locus tag: RVIR1_02330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLESFQVGVEAAHSALDDNVNPYPSFEILSIYQKQASELLSEASDDIALYDGFESYSSALEKEVAHG
SIO_010081: DMP02_RS01135
subclass of: SO_0000673
so part of: DMP02_RS01135
location: 239282..239488
location: region:239282-239488:1
so has part: feature:239282-239488:1:exon

WP_126322281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239282-239488:1:exon

DMP02_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01140
so part of: sequence
location: 239481..239687
location: region:239481-239687:1
so has part: feature:239481-239687:1:exon
subclass of: SO_0000010

position:239481:1
position: 239481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239687:1
position: 239687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239481-239687:1:exon

DMP02_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNLQHLAHVAPFTSSYSQNTIPEWRKSRWCVSKEYDRMTIDSVNNGYESYDDLPENLIMFSRAKIAQ
SIO_010081: DMP02_RS01140
subclass of: SO_0000673
so part of: DMP02_RS01140
location: 239481..239687
location: region:239481-239687:1
so has part: feature:239481-239687:1:exon

WP_126322282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239481-239687:1:exon

DMP02_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01145
old locus tag: RVIR1_02340
so part of: sequence
location: complement(239735..240133)
location: region:239735-240133:-1
so has part: feature:239735-240133:-1:exon
subclass of: SO_0000010

position:239735:-1
position: 239735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240133:-1
position: 240133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239735-240133:-1:exon

DMP02_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01145
old locus tag: RVIR1_02340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDTKPDTKPLFIAIDISGSTYGYEDYYSYVKDELKSWENTHPNAHCILWNNRTPRMMSIQQAIKINCRIGENGTDPSTFVKYLPSDEAGINLVIITDGQIDKQEVDRCAAILDDRNIRIKELIMHIKVLTL
SIO_010081: DMP02_RS01145
subclass of: SO_0000673
so part of: DMP02_RS01145
location: complement(239735..240133)
location: region:239735-240133:-1
so has part: feature:239735-240133:-1:exon

WP_126322283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239735-240133:-1:exon

DMP02_RS07185
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07185
so part of: sequence
location: complement(240734..240836)
location: region:240734-240836:-1
so has part: feature:240734-240836:-1:exon
subclass of: SO_0000663

position:240734:-1
position: 240734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240836:-1
position: 240836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240734-240836:-1:exon

DMP02_RS07185
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS07185
product: tRNA-OTHER
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
SIO_010081: DMP02_RS07185
subclass of: SO_0000673
so part of: DMP02_RS07185
location: complement(240734..240836)
location: region:240734-240836:-1
so has part: feature:240734-240836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240734-240836:-1:exon

DMP02_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01155
old locus tag: RVIR1_02350
so part of: sequence
location: complement(240916..252564)
location: region:240916-252564:-1
so has part: feature:240916-252564:-1:exon
subclass of: SO_0000010

position:240916:-1
position: 240916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252564:-1
position: 252564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240916-252564:-1:exon

DMP02_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01155
old locus tag: RVIR1_02350
inference: COORDINATES: protein motif:HMM:TIGR03696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHS repeat-associated core domain-containing protein
translation: MPLLNYQLNRLDSIRSFHFNLSGPSEDIIQGDDIRKCTLQPFYIRQNREIAYYEYNKEEKTLHKIVSEPLFNRERSYSSTAYPAYVSDVLGVGEPMLILRTIQGISFYRPSKSLPQKFELVAQDLRFHDVHHWNQANHTVRFGHFYSDKSSLGVLTHSSREGVKFYVVSKEDVKRNYSMPLWSVGIKNPAIIQQPIWNDPETDFFVTDTRRRGQDDIVLRNSEGLSLYEFKPDYSLNNFLNTPIAAKIGNTTQEDSLLFTDLTHQIYQDIVVWNDSGLFVYQYQRNNNSYALLSYSANLSKNRGWKPEYFRSLQLFDLDGDQRNELILTGPQGITFLTFDPIQNEWCSVLDSSSLIGTERYVQVLKILPSCSFNSSTPTLLTQDQSNLQLFEITKVRGSGEKKNDTDIHENNEEFEVSVPKFALPIRSNVTIPDQIKHTNLDIFHRRWADQWEHRIFENAIDIPNGQVHFTLPLVDIDLPGDLTIQLAFSYNNQIPSSKNGLLGVGWSTALTQDMIFVEDQGSLRLEDQRYTLMVSGRIQYLRYIESHTAGSDKLIFASAEMPDLKIYYERRNQRWVIDTDEMHCIYGQANAANQVTAIQWRLTWPYWRGLGRAAASQEPVPVAWYLVERHTKRSNQTLYYHYETVNRTVPNGKEFTESIVLKKISNQQGTTLNLEYTNKTTDEYTVEPILDKEGFIHCPGVQRRYLSGYQLDTPTYQQHLSFNYEIRNEQRLLTNIEQKFGSNQYEKLLQFRYKKQLEHLLLVEVVSPQNTSAQFHYQGLNLVPQAPEIKHWVSPQKDSLAVNQGSNYTVVSYEDSQEEIVLQILNSDATDILATTTVHPKKPLYKRPEINKNYQIHLGEDFFVLLLYTQATQEVYLFHRYQGNFSVDPAYYEWDKAALIRTGESFIAVVEMGQGTVTIVDWNKKEQQWRKSLLSAPIPHSLQQPIESFIIHGRSFATYDDKNLWMGYLDNQSCWKTKLLKSNLVGLASMNRQTIGRFELAQDMQEQLLTVLKYNGLQMLHNFIQLSALELKKENAQLRMHIHLFLLDENFNIVKTHTDKLEREKIRELTQNHEGKDDVYQLGYVEEGEHFKVKIKTFVSGKIAEWAKTANKNHVEDKLKEYNAANESKEFFKRTLLFAWGSFYQIHMSPQGVVCGNDTLLRITGTGWEKVDLPIKSEEVTIDLNKHFVLKQTDKKSSFKLYKKNKDGHLHSEVIRNLGVHDPLKLLRVDPYFLTFQVNTNEIGLITFNGENASFQSIPNAQLMGASAYGLITLKKLPLSEWVGQKGGKPEALLIQPLTHFLPHLLQPIIREVVFNDQITQRHTGFSYEVDSSHNTENSSVQTKKVTIIPGTNKTLSGWREEIWRYDTTKKEITHEQAFFDGQDKIVQVPKKNNKEIIAPLNETTNQNNISKSQLWDHTERLVIADFSPYILEDEEVGYYGFESYEVNQIGKLAQNSTLLVKRWEFNKENIVKRGFSFTGENYLHLDGKKESNDTYLEAIFQPRRQDTTYLASCWVRCSQPVELNQAVPFLKGVIFTDQGEEVLGVLSRVKFQSGDWSYLELLVELPFIKAIYQEMTMQAATSNITESSSMVVSSPLASVSDSPPAHKIDIPLNIVLRVGTATNISVDLDHIRFSPLDSAFEVSVYHPVTSQPTAVIQMNGLVTRTLYNRLHQPIATLKEQGQLEFVSAESKTGYLFPLPEGIEKTQASRVTFQPESGFYEEFDPFALRSRWTVNEPETWKIAPGQLYHQANHWNQIAADSRLLDSASLALRCEIAFLSSSASLRWHWQGSYVELTRQGMSSTLFCPSCHTKSMKGLPIQGEWIFFVEKNRLWVWSEGVLLFDQAWSAGNDQSLKPWTRLMLEARGHVAIKDLCLMNNPSVQVEYFNRFGEKTQVITLKDAQTALVSETLYDTLGRLAITTKVTSLTRASNQSLLAYYPDFVTNDHPSDSNSVWNTGYLPGEVNHLNHQDRGFAYQRVTYAPNLLNEKQAIGLPGPDFS…
SIO_010081: DMP02_RS01155
subclass of: SO_0000673
so part of: DMP02_RS01155
location: complement(240916..252564)
location: region:240916-252564:-1
so has part: feature:240916-252564:-1:exon

WP_126322284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240916-252564:-1:exon

DMP02_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01160
old locus tag: RVIR1_02360
so part of: sequence
location: complement(252649..255003)
location: region:252649-255003:-1
so has part: feature:252649-255003:-1:exon
subclass of: SO_0000010

position:252649:-1
position: 252649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255003:-1
position: 255003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252649-255003:-1:exon

DMP02_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01160
old locus tag: RVIR1_02360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNVITNNSNSSHVDKKQRKDSKVNKVSELQPKRNGFISGLLNGLYSSTQFILNNPAKVLTLGLVGQVVSSSALGNFQGQASSRTNNSTDLLLLDKPHLNESLALIEQRIGSSVHIETKQEKDKVINFKISRRLRQLDFESQRKDSNNNVAINRLKWLKEDINDFSVNLNQTAGSYQVNVDTENRLHILIDRLDSLKENIPLEYIGELEVINKQLQSLLFPLNDPKITDEKDAKELANSSKQSRNPRQSGVGPQPPNENAQIMTNLSYLQEDVNDLKNRVDRVTNSEASLADVLRIKNEAESRIATLTARLDNIKRDVYQEHSVQIDAINQQVQGLQSQLDSINTALLQKIANIEGKLTEQDKENARRREADRDANKQRAIQDCIAAIRDGSPEQANTKWQHIIELDTNKHWFKEELEHIIREAYGSSLSNFNKVEGFISRLPLISQSAVGYKILIEGMKQNGQFFTPEMVRVGYRIKEYMDMPNYSNIGQEYKNIYDSLKSGLPEAVRHLLWRKVCLRNTVKNNEYLYSANNYFKYDDDRWRVFTWRSGYPGSHAVWKFETYDQGKTFEIKNNYRGQYLYAAIGDLKYDDDRRQIFTWRNGNRVQKNEWRVELLTTDDSKDGSEIALWNDFYDETLYAAADDLKYDDDRRRVFTWIPNTPLLQARWKIEDCGSYGSRKRRDLSERFTVVNAMLANEKLDQKDKLRGVSGRNLVGTEVNSNAVNNSSELSFLKNSFGSNLLFFGVQRPQTALLDGNAPFSNLSDVGDTHLSAPYQGKLNTTLSK
SIO_010081: DMP02_RS01160
subclass of: SO_0000673
so part of: DMP02_RS01160
location: complement(252649..255003)
location: region:252649-255003:-1
so has part: feature:252649-255003:-1:exon

WP_126322285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252649-255003:-1:exon

DMP02_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01165
old locus tag: RVIR1_02370
so part of: sequence
location: 255612..256256
location: region:255612-256256:1
so has part: feature:255612-256256:1:exon
subclass of: SO_0000010

position:255612:1
position: 255612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256256:1
position: 256256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255612-256256:1:exon

DMP02_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01165
old locus tag: RVIR1_02370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLTSRDVDILRFINEFGFCEMPQLNQRFGLRKPRNYQVINKLIRHHLVQHERIFYKQHGLFRLTAAGARFTPLPPLHRVPLANYRHDLTVLTLYLKFRDLYPDVTWISERKLKHDKYKLGVGQHGHLPDGVLVFPDDKQIAIEVELSHKSKLRLDDILKSYASQFSIQEVWYFCKESMQPRLQEATKAMSFVKIYLLKHFLEKQPTNYHVSTG
SIO_010081: DMP02_RS01165
subclass of: SO_0000673
so part of: DMP02_RS01165
location: 255612..256256
location: region:255612-256256:1
so has part: feature:255612-256256:1:exon

WP_126322286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255612-256256:1:exon

DMP02_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01170
old locus tag: RVIR1_02380
so part of: sequence
location: 256240..257931
location: region:256240-257931:1
so has part: feature:256240-257931:1:exon
subclass of: SO_0000010

position:256240:1
position: 256240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257931:1
position: 257931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256240-257931:1:exon

DMP02_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01170
old locus tag: RVIR1_02380
inference: COORDINATES: protein motif:HMM:NF021897.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MSVQDNSFLQRPREAIQCLLIGLCCLWQLGVGLLGLLCFLVFIRGLRYSVWQIFLTGISLAVYSCFLMEWQAHFTLSFLKLIDDGFVDHLMFWKTLFTQGFPVALGVAYQQAFYYLVGFPLLLASVLGMTEWIPNSTHEWELKAIQRGKALSYRNPWHKRLTRQNKKNEDGTLLGISATKEAVIIPDAAVNQMALVLGTTGGGKTITLRRFYQRALQKTYPLIIVDGKPTQENVTWLQKKSQDYQRAFYGFNCGDYHHYDPLAHGGYTELKDKLISLKDHWENDYYRSIAEDYLQTTFEVLLTLKKNFDLKTIVNCLDFQELALKTRAITDQSLKKRVSRLQRYDTKDITGLQAHLNLLIYSELGIFFEKTKNTFNLAEVIQSGSIVYFALPALRFPSFAKVLGKLIINDIKAVIDRLETKQRIFTIFDEFSVFAGEQVLNLVNMGRGKGIHAIFGTQGLADLKRVDTDFEKQVLNCVNTLICHRLNDHESAESIACWVGTQDGFDITAQISEDASTGMGSVKRNKSFIIHPDSIKQDLQPGEAFYISKVGKFFWQKVKVTYS
SIO_010081: DMP02_RS01170
subclass of: SO_0000673
so part of: DMP02_RS01170
location: 256240..257931
location: region:256240-257931:1
so has part: feature:256240-257931:1:exon

WP_126322287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256240-257931:1:exon

DMP02_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01175
old locus tag: RVIR1_02390
so part of: sequence
location: 258508..259242
location: region:258508-259242:1
so has part: feature:258508-259242:1:exon
subclass of: SO_0000010

position:258508:1
position: 258508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259242:1
position: 259242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258508-259242:1:exon

DMP02_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01175
old locus tag: RVIR1_02390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASTIIHQSNTLQQLALNCLPGSRKIIQCLHKLEKKFERDFHGEDILSEMEEDEKSAYELFGKNIIPHENFYSLYYAQDDIIKCLRKVADDIESYNALEKFLTLFGEQVELQKNRYSTKKNQRTGTYEFTTLKKLTLDCLPDNQEIIKRIHDLKKQLKVVLSKMRTAKKSAYALISGNVISHQPFYLLYVCQDNIIRELRQAANDIEDCNGFRKFLHIFSDQAQLGKVQRNIKNDRAVCHDYCA
SIO_010081: DMP02_RS01175
subclass of: SO_0000673
so part of: DMP02_RS01175
location: 258508..259242
location: region:258508-259242:1
so has part: feature:258508-259242:1:exon

WP_126322288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258508-259242:1:exon

DMP02_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01180
old locus tag: RVIR1_02400
so part of: sequence
location: 259547..259870
location: region:259547-259870:1
so has part: feature:259547-259870:1:exon
subclass of: SO_0000010

position:259547:1
position: 259547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259870:1
position: 259870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259547-259870:1:exon

DMP02_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01180
old locus tag: RVIR1_02400
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MMADRFKKGNKIYQVLLRSPLIIFPFIFSSSVWAFGGDTPVSQGLNYVIDAVYGATGLSIATVAIIGMGLLCAGHYLEWKRFLQTLVGIAIMFGAGGVARALHLLIS
SIO_010081: DMP02_RS01180
subclass of: SO_0000673
so part of: DMP02_RS01180
location: 259547..259870
location: region:259547-259870:1
so has part: feature:259547-259870:1:exon

WP_126322289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259547-259870:1:exon

DMP02_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01185
old locus tag: RVIR1_02410
so part of: sequence
location: 259895..260194
location: region:259895-260194:1
so has part: feature:259895-260194:1:exon
subclass of: SO_0000010

position:259895:1
position: 259895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260194:1
position: 260194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259895-260194:1:exon

DMP02_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01185
old locus tag: RVIR1_02410
inference: COORDINATES: protein motif:HMM:NF016957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSKDYQLEVDPLALALTRPPLFMGVPMRLFFANLAINMMLCIDLHTLIGIPLFGLVHLILFRLTMKDLQFFRVWLKYLTQTPPVLNHSFWGGTNSYQLE
SIO_010081: DMP02_RS01185
subclass of: SO_0000673
so part of: DMP02_RS01185
location: 259895..260194
location: region:259895-260194:1
so has part: feature:259895-260194:1:exon

WP_126322290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259895-260194:1:exon

DMP02_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01190
old locus tag: RVIR1_02420
so part of: sequence
location: 260213..262636
location: region:260213-262636:1
so has part: feature:260213-262636:1:exon
subclass of: SO_0000010

position:260213:1
position: 260213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262636:1
position: 262636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260213-262636:1:exon

DMP02_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01190
old locus tag: RVIR1_02420
inference: COORDINATES: protein motif:HMM:TIGR00929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MKKRKKQAGFKWNPFLKRETNASQHINIIGHYNNDTLIDKNGQLIQIIRLAGIDGITQSEEILDAYKNRRNSLFKHFSSEYAVYFWTVGRQTTEYPGGEFKPGFAQQLNENYRKRIQQQPLFHHEHYAGIVTKPAEGVLNQGFDWIKKLSQQADHIAQQRQLAKTQLALTAITQNVLQTLADYQPQLLSLYQKGEQLFSEPLEFIGQLINYDKYSVPLLFQDASTYLPRKRLFFNRHSGTIECRASDHSKKFAAVLAIKAYPSITYQGLLDSLNSLRAEYTLTQSFRFYDRHLAKTRLRDQQHDMQQTQEESLRQTEQIDEAFDDAASGEAGYGQHHFTLVCYADSQKQLNQQVSEIIALFSDRDIVCVREDMACECGFWAQLPGNFSYIVREADISTKNMAALASLHNSPIGKFKDNFWGDAVTVLETLSGSPYYFNFHDKDVGNFIVVGATGSGKTVLVGFLITQSMKFGGKRVIFDKDRGLEILVRALGGIYEVLKPGIATGFNPCQLADTKENRTFLLQLFKQLLKSCHKPFDEQEIKTIEEAITGMYRLNPEERQFCHIAPFFGANIPGSLRARFELWHSGREQAWLFDNTGDCFEQDHYNADVIGLDLSHILKDECCKTPTLMYLLHRFSQQLEGQRGMIFLDEGWLALQDEYFKKIINDLSRTPRKKNNFFGLATQAAYDTLSSAIQTPINEAAACKIFFPNPSADRKTYIEGFGLSEREFELIKTLPSESHYFLLNYGRGKESVVLRANLHGLDDEIAVISGRKETVALLDSIRAEVGDDPNIWLPIFQQRRKVKKIGC
SIO_010081: DMP02_RS01190
subclass of: SO_0000673
so part of: DMP02_RS01190
location: 260213..262636
location: region:260213-262636:1
so has part: feature:260213-262636:1:exon

WP_126322291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260213-262636:1:exon

DMP02_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01195
old locus tag: RVIR1_02430
so part of: sequence
location: 262630..263331
location: region:262630-263331:1
so has part: feature:262630-263331:1:exon
subclass of: SO_0000010

position:262630:1
position: 262630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263331:1
position: 263331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262630-263331:1:exon

DMP02_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01195
old locus tag: RVIR1_02430
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MLTTQLSLAPVIKITILSLLILLPLPSAADPISDLLMIAEQIQGYQQQISGIQNTIAGLTDQIQAAVSGQSEWGRWQFTDHQSWGENTDQWQAILNMTGKGGNSSLLGQTLHFLEKEFPVDTPLYNQVNPNKCDQAYYALKAKTALAARAASQLGYDKIQEQINYANQLRQQIGSTTTLKQSLDLQSRLTIENNLIQLETLRQLALLNQQHAIDAQAEVNDAIQTARFLSTKF
SIO_010081: DMP02_RS01195
subclass of: SO_0000673
so part of: DMP02_RS01195
location: 262630..263331
location: region:262630-263331:1
so has part: feature:262630-263331:1:exon

WP_126322292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262630-263331:1:exon

DMP02_RS07425
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07425
so part of: sequence
location: 263363..263494
location: region:263363-263494:1
so has part: feature:263363-263494:1:exon
subclass of: SO_0000010

position:263363:1
position: 263363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263494:1
position: 263494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263363-263494:1:exon

DMP02_RS07425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQYLSALLALFLVLSLSGCVTKPLQAPCDANATFCGTKTKIN
SIO_010081: DMP02_RS07425
subclass of: SO_0000673
so part of: DMP02_RS07425
location: 263363..263494
location: region:263363-263494:1
so has part: feature:263363-263494:1:exon

WP_269471418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263363-263494:1:exon

DMP02_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01200
old locus tag: RVIR1_02450
so part of: sequence
location: 263516..263875
location: region:263516-263875:1
so has part: feature:263516-263875:1:exon
subclass of: SO_0000010

position:263516:1
position: 263516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263875:1
position: 263875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263516-263875:1:exon

DMP02_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01200
old locus tag: RVIR1_02450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLFLPFKQFILFSVLFTSFSLLAACGHKNPLLDTNMIQVMDEEFFLRGGSYPIDECAYYYSYSKQNYSLKKKCNEWTQEYYRRLIDRHVIPTTTTVEDLRDPTFWKKIKALHFLGKEQ
SIO_010081: DMP02_RS01200
subclass of: SO_0000673
so part of: DMP02_RS01200
location: 263516..263875
location: region:263516-263875:1
so has part: feature:263516-263875:1:exon

WP_126322293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263516-263875:1:exon

DMP02_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01205
old locus tag: RVIR1_02460
so part of: sequence
location: 263872..264882
location: region:263872-264882:1
so has part: feature:263872-264882:1:exon
subclass of: SO_0000010

position:263872:1
position: 263872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264882:1
position: 264882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263872-264882:1:exon

DMP02_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01205
old locus tag: RVIR1_02460
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MSTLSVNTFITDTLSAVDQTIEGFVHNVYQQFLQQYGYALTLLCTVYILVLGYRFTLHTLSADFNTLNRHILVLLMVYGLIINWSLYQLFIYNIFTNEPNHIAQIIVNASNHQFTTDKTIAEALNQVYGIGMSAAGKLLSSFTIQKFLCAILVIIFTFLCSLTALALLIYAKLAMAIGLALGPLFLPFMLWESTRGWFVSWLQKLFNFSLIPIITASILSLMLSLINLVLPDLNQQALQGAPDFFTVGLFGGLSLVTAFLLKQSLSIASSLSGGLTLSALGQIGSMVKSALNTTGVNSAARLTGKGLKSAGSAMVKKAQGQKQSAIHSAVEQGKNN
SIO_010081: DMP02_RS01205
subclass of: SO_0000673
so part of: DMP02_RS01205
location: 263872..264882
location: region:263872-264882:1
so has part: feature:263872-264882:1:exon

WP_126322294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263872-264882:1:exon

DMP02_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01210
old locus tag: RVIR1_02470
so part of: sequence
location: 264883..265626
location: region:264883-265626:1
so has part: feature:264883-265626:1:exon
subclass of: SO_0000010

position:264883:1
position: 264883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265626:1
position: 265626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264883-265626:1:exon

DMP02_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01210
old locus tag: RVIR1_02470
inference: COORDINATES: protein motif:HMM:NF016238.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MMTTLKNKKKALAEEKSVDPGNAFYQAASDWRYDRYYSKTIWLRYSLIINTALLTALLLTLVVIACLIPLKQKVPYLYAFNQATGEVTKLGELEPTRLTANWQMTRYFIIHYVMNRESYDSDNLEIPYQLAWAQSNAIIRKQYDAEVSSNLANSPYQKYGKDKAITVRVLSVSRLNDNTAAIRFEKQLRDKTANTQQIVHQEAILKWQYQSMKATQTQLDRNPLGFTVIYYQVTPVNLNNGGHDKHE
SIO_010081: DMP02_RS01210
subclass of: SO_0000673
so part of: DMP02_RS01210
location: 264883..265626
location: region:264883-265626:1
so has part: feature:264883-265626:1:exon

WP_126322295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264883-265626:1:exon

DMP02_RS07430
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07430
so part of: sequence
location: 265619..266071
location: region:265619-266071:1
so has part: feature:265619-266071:1:exon
subclass of: SO_0000010

position:265619:1
position: 265619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266071:1
position: 266071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265619-266071:1:exon

DMP02_RS07430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07430
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MNKKISFLLLMVILVQSTLTQAALIPRKVTADRHIKVVTYDPNNVVVIHGHYGYETQIVLAPTEEIQTVSIGDSLAWQAVPVKNNLFIKPVTESKTNMTVLTHVNSYNFQLDSTPAKVSPTYKLRFIYPTGGYNRNEQPNAVGVCDPTPN
SIO_010081: DMP02_RS07430
subclass of: SO_0000673
so part of: DMP02_RS07430
location: 265619..266071
location: region:265619-266071:1
so has part: feature:265619-266071:1:exon

WP_172593952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265619-266071:1:exon

DMP02_RS07435
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07435
so part of: sequence
location: 266037..266342
location: region:266037-266342:1
so has part: feature:266037-266342:1:exon
subclass of: SO_0000010

position:266037:1
position: 266037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266342:1
position: 266342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266037-266342:1:exon

DMP02_RS07435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07435
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MQWVFAIPHQINWKYSFTGDKRLAPREAFDCNNQFTYFRFNNTLPAIFIVDKNRKETLVNYHRKGNYIVVNSTAPQFTLRSGSYVTSVYNDAMIGDWQNIR
SIO_010081: DMP02_RS07435
subclass of: SO_0000673
so part of: DMP02_RS07435
location: 266037..266342
location: region:266037-266342:1
so has part: feature:266037-266342:1:exon

WP_126322297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266037-266342:1:exon

DMP02_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01225
old locus tag: RVIR1_02490
so part of: sequence
location: 266348..267433
location: region:266348-267433:1
so has part: feature:266348-267433:1:exon
subclass of: SO_0000010

position:266348:1
position: 266348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267433:1
position: 267433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266348-267433:1:exon

DMP02_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01225
old locus tag: RVIR1_02490
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MKKKEKNNETTPSSTEGLPEIAEARYKRPFLLVILGGLLVLLATQFYFHARKISNKTEFSVEEAYTLPKTEPEQVKVSPILEKPAEKNLSEQQIAVLQAKQKELQQRLSSPMMLFNTENNHQANALVEKSSEKNVMTDANTQFLQQAGKVSDKTVQAKRIGPLNQLIAQGQLLHATLETAINSDLPGSLRAIVDQPVYAEDGSQVLIPPGSRLIGQYKSGMLQGQSRVFVVWTRLITPEGINLNLASPGVDALGMGGMSADRIDRHFWQQFGTAALLSILGAGTSNVGVAGGNASYNASQAYRLAVANSLNQTAQQTLQRGMIPPTLWINQGSPLQVFVAHDLDFSAVQQETNPTPKTTIF
SIO_010081: DMP02_RS01225
subclass of: SO_0000673
so part of: DMP02_RS01225
location: 266348..267433
location: region:266348-267433:1
so has part: feature:266348-267433:1:exon

WP_126322298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266348-267433:1:exon

DMP02_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: virB11
locus tag: DMP02_RS01230
old locus tag: RVIR1_02500
so part of: sequence
location: 267440..268411
location: region:267440-268411:1
so has part: feature:267440-268411:1:exon
subclass of: SO_0000010

position:267440:1
position: 267440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268411:1
position: 268411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267440-268411:1:exon

DMP02_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: virB11
locus tag: DMP02_RS01230
old locus tag: RVIR1_02500
inference: COORDINATES: protein motif:HMM:TIGR02788.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSTKALEKHLEPLKPFLAKKGITEICINQPKVIFVEKNGVFTRHEVEALEFSFLEALANLIAEFNHKPFPCPLLSGYLPTGERIQCIMSPACEKDKIIYSIRCHSRRDMRLQDYQKAGVFDDYAAIKENIYHKTIADLKTLHEQKDIFGFLKLAIQSKKNLIISGGTGTGKTTFLNACLKLIPHTERLITLEDTREVNIKQPNTVNLLFNEEDEQITASKLFKACLRLRPDRLFLSELRGSEAWSFLRAANSGHPGSMSTVHADTPQGCFKQLVFMMQQAGSTSSEENLHTYIKSIIPIVIQLKRSTNPTQFVEVAEIYFNSL
SIO_010081: DMP02_RS01230
subclass of: SO_0000673
so part of: DMP02_RS01230
location: 267440..268411
location: region:267440-268411:1
so has part: feature:267440-268411:1:exon

WP_126322299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267440-268411:1:exon

DMP02_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01235
old locus tag: RVIR1_02510
so part of: sequence
location: complement(268434..269393)
location: region:268434-269393:-1
so has part: feature:268434-269393:-1:exon
subclass of: SO_0000010

position:268434:-1
position: 268434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269393:-1
position: 269393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268434-269393:-1:exon

DMP02_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01235
old locus tag: RVIR1_02510
inference: COORDINATES: protein motif:HMM:TIGR01784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MLSKFLDPKNDIAFKVIFGSEKNKDILIHFLNDILGFTGSQQIQSVEFLSTVQDPEIAAKKQSIVDVLCRDEKGTKLIVEMQVATTKGFEKRAQYYAAKAYAQQADKGEKYHDLREIIFIAIADCVLFPNKSGYKSDHIILDRDSYEHDLKDFSFTFIELPKFHKKEIAQLETLIEKWCYFFKYAANTKVADLEQIIGSDQIIKRAYEALDQFYWSENELALYEQELKRVRDNEAVLAQQIDDATEKGLQQGIQQGIQQGIQQGIQKGEYAFLHHLLQRKFHQVPQRYLDKMGCADADTLLKWGESVLDANNLTDIFNE
SIO_010081: DMP02_RS01235
subclass of: SO_0000673
so part of: DMP02_RS01235
location: complement(268434..269393)
location: region:268434-269393:-1
so has part: feature:268434-269393:-1:exon

WP_197720787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268434-269393:-1:exon

DMP02_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01240
old locus tag: RVIR1_02520
so part of: sequence
location: complement(269562..269966)
location: region:269562-269966:-1
so has part: feature:269562-269966:-1:exon
subclass of: SO_0000010

position:269562:-1
position: 269562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269966:-1
position: 269966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269562-269966:-1:exon

DMP02_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01240
old locus tag: RVIR1_02520
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MNHSTVKENLSSRSGRILVVEDNPLIQRIHLQLLQGLGCHVDCVTQGQDALRQLTYDLVFVDLGLPDISGEMVIEMIRAREAKRKRIPIIVVSAHGKEQELQCLTLGADQVLTKPVKIEDFRAILGDYNLLEKQ
SIO_010081: DMP02_RS01240
subclass of: SO_0000673
so part of: DMP02_RS01240
location: complement(269562..269966)
location: region:269562-269966:-1
so has part: feature:269562-269966:-1:exon

WP_126322300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269562-269966:-1:exon

DMP02_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01245
old locus tag: RVIR1_02530
so part of: sequence
location: complement(270082..270528)
location: region:270082-270528:-1
so has part: feature:270082-270528:-1:exon
subclass of: SO_0000010

position:270082:-1
position: 270082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270528:-1
position: 270528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270082-270528:-1:exon

DMP02_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01245
old locus tag: RVIR1_02530
inference: COORDINATES: protein motif:HMM:NF012422.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSKKKVTGSAAEDPDITQYSANQSTDIVTRILRLLGNHSPSVKQRRLIKTLLFNISFKAELLFDKSLAPREQECLLFAALGCSSAQTAEILPIEKKTVEEFLSNTRKKLGCKNTTQAVVQGIRYGYISPEKYGQNPVKIRENKSLATQ
SIO_010081: DMP02_RS01245
subclass of: SO_0000673
so part of: DMP02_RS01245
location: complement(270082..270528)
location: region:270082-270528:-1
so has part: feature:270082-270528:-1:exon

WP_126322301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270082-270528:-1:exon

DMP02_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01250
old locus tag: RVIR1_02540
so part of: sequence
location: complement(271009..273081)
location: region:271009-273081:-1
so has part: feature:271009-273081:-1:exon
subclass of: SO_0000010

position:271009:-1
position: 271009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273081:-1
position: 273081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271009-273081:-1:exon

DMP02_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01250
old locus tag: RVIR1_02540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFNLTETITHFNQVYQKRIKLNKTWGLVYLHPKSLDFLNQCCRLIQESVYHASPFVTQRRALRATLAKTQDQSTSEALAALKTIVQQLKTDELVRQRLDWEEHLQTLFNTEIFWQQGFNQLESNLRAKLQLKQIYQDWKKHRPFQYYSAQGLLFLLNVIVHYQYHFTQAHEELERKQQAWLPSQRLPAPIAASYCQFLERKLNHLKVLQQQVLEVLLLRLKIAEHRKQVTCDDVSYALVEQSQRLLSLSITLPKHQRTLDAATFNQIHRAIVQYGSPHHKNQLYGLAWYQYAEFSAAKDITLITISVHRLLAPTKLIHLIPKKVRKPAWLFRSNKTRFAFLERQQALLAQLLLPLDFTPLLPNSFSTIHVTLQPFILRYQLLQESLQSLEQQPALRWWQWRQKRWEKAWQKWLMHHFQKNQEDLREVLNHFFIHLQNHKGWLSQATCRQPLQDSLTTIQHLIEQGPYAAHCTRLAFLLKHLSTQLHAKAEEIARERHRAASLTQNFKQDVSIALEAYVKYYHDQGQTIPEARMADIDYLRKLLNTTHDLLLLREGVMQRYQTMQRPPLAKLMTSLDGSALRQGLRIVLEHPKYRIEQFTLAVASLPSSSQKVLYQGNNLSDFALRSKESIVDRQATASSIPDINNMALLTLEQQFTQVQTQIQQLMNNTDRTNLPLQSPDIVKNHARFFK
SIO_010081: DMP02_RS01250
subclass of: SO_0000673
so part of: DMP02_RS01250
location: complement(271009..273081)
location: region:271009-273081:-1
so has part: feature:271009-273081:-1:exon

WP_126322302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271009-273081:-1:exon

DMP02_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01255
old locus tag: RVIR1_02550
so part of: sequence
location: complement(273099..273965)
location: region:273099-273965:-1
so has part: feature:273099-273965:-1:exon
subclass of: SO_0000010

position:273099:-1
position: 273099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273965:-1
position: 273965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273099-273965:-1:exon

DMP02_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01255
old locus tag: RVIR1_02550
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF013704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MLNTPISNNLLHSDVSQGAAYQILHGDCRNVLPTFPEKVALIVTSPPYADARQAHYDSVAPHHYTDWFVTFHEALWRALKPTGSLVLNMKDKIVQGVRQHYVWATIEKLIGLGWHCIDDYIWHKKTSMPGYWPTRLRDAWEYVFHLAKVKKPYVDQEAVKIPMAASTQQRIARFSGLKKRIVVSATGSRFQCNFANWRHKKQVLPTNVLHLCPENRNQGHPAVFPVALPQFFIRLLSKPQDLILDPFAGSGTTGLAALSLGRRCVLIDNQLPYCHVAERRLSQLIKEK
SIO_010081: DMP02_RS01255
subclass of: SO_0000673
so part of: DMP02_RS01255
location: complement(273099..273965)
location: region:273099-273965:-1
so has part: feature:273099-273965:-1:exon

WP_126322303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273099-273965:-1:exon

DMP02_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01260
old locus tag: RVIR1_02560
so part of: sequence
location: complement(273979..274644)
location: region:273979-274644:-1
so has part: feature:273979-274644:-1:exon
subclass of: SO_0000010

position:273979:-1
position: 273979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274644:-1
position: 274644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273979-274644:-1:exon

DMP02_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01260
old locus tag: RVIR1_02560
inference: COORDINATES: protein motif:HMM:NF040435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6475 domain-containing protein
translation: MLADDKKQFLQWLTLLTESFNRKVSSVLLESYWQCLESYPFMQVKQAMLNTLQNPARQKWGMPTPADLIVLIQGDNHQPARKAWSQVLSAIRTVGGYDSVVFDNAVIHCVITDMGGWVYLCQQSERELSFLAQAFENRYCDYQGKPLPRYPRLLKGRLEQEHESQGYTHTPPEPILLGNPECALAVYTQGNAQCSQTPLSLSQATQKFSQQQENNVLTKEK
SIO_010081: DMP02_RS01260
subclass of: SO_0000673
so part of: DMP02_RS01260
location: complement(273979..274644)
location: region:273979-274644:-1
so has part: feature:273979-274644:-1:exon

WP_126322304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273979-274644:-1:exon

DMP02_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01265
old locus tag: RVIR1_02570
so part of: sequence
location: complement(274638..275690)
location: region:274638-275690:-1
so has part: feature:274638-275690:-1:exon
subclass of: SO_0000010

position:274638:-1
position: 274638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275690:-1
position: 275690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274638-275690:-1:exon

DMP02_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01265
old locus tag: RVIR1_02570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDYSKLSPHFWINEQGKQIKQFGGATQLIALYLISNPHCTMLGIYYLPMPFIAHELGITLEGALKGLQNLCEVGFCTYDAASEYVWVHDMALSQLGQALKPNDNRVKCINELYQALPKLPFLDKFYEAYHISLCLDKKTKGLIRPYEGTSKSLLSQEQEQEQEQKKEQKQEEDQEQDVDGGAPSDDGLPSSNSELKNPPVKQLLDVIDDKVVSIATTVTSIGLYQIPLSDGSQFMVLPTSITHWQKTYPAVDVAQELRQIQAWNEANPTERKSRTQILRHINTWLAKEQRAASQQRQQSPPFEHHLDLARRGLSPTLAHNLIVGERWLKQSMAKEETLHPLSDAQEILC
SIO_010081: DMP02_RS01265
subclass of: SO_0000673
so part of: DMP02_RS01265
location: complement(274638..275690)
location: region:274638-275690:-1
so has part: feature:274638-275690:-1:exon

WP_126322305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274638-275690:-1:exon

DMP02_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01270
old locus tag: RVIR1_02580
so part of: sequence
location: complement(275694..276611)
location: region:275694-276611:-1
so has part: feature:275694-276611:-1:exon
subclass of: SO_0000010

position:275694:-1
position: 275694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276611:-1
position: 276611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275694-276611:-1:exon

DMP02_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01270
old locus tag: RVIR1_02580
inference: COORDINATES: protein motif:HMM:NF027273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdaS family helix-turn-helix protein
translation: MWETALLKAIQQFDTMQQFSEKLGVPRESVSAWLHKNIQIPLEYALCIDSLTQGTVSWKELVPSYKVRLLRHIAFSIGPVTAYSCIQVCVSLHRIQALKNNRPQYNLPHANVFLGLDENNRIIFGEELFYHYQALGKKTIPALLFSLSALLAGKYDPKDLAQTLLMSERLAIGIALEKLIGNRQGKRTDLVKNKQKADFDEALWEKFPEVKEKSTTLIAYLIGFGNNHRKCFEQGKQILKYGCPQLINQLNQRKIALSTAAALTSLCHAKQKQILAGSKKEIIALTQQLKQTAKQKIVINPSKEI
SIO_010081: DMP02_RS01270
subclass of: SO_0000673
so part of: DMP02_RS01270
location: complement(275694..276611)
location: region:275694-276611:-1
so has part: feature:275694-276611:-1:exon

WP_126322306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275694-276611:-1:exon

DMP02_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01275
so part of: sequence
location: 276810..277148
location: region:276810-277148:1
so has part: feature:276810-277148:1:exon
subclass of: SO_0000010

position:276810:1
position: 276810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277148:1
position: 277148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276810-277148:1:exon

DMP02_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019235678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMQPRLIRLRDAPNYLGMDRHRFNDEVRPHLTVIPIGEIGIAFDRLDLDAWVDDYKQCKGRPPLERKPLWEEKKCQGSLNAGTSGTLTRKSTAVAFQKALDQARSKKPNAI
SIO_010081: DMP02_RS01275
subclass of: SO_0000673
so part of: DMP02_RS01275
location: 276810..277148
location: region:276810-277148:1
so has part: feature:276810-277148:1:exon

WP_232019583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276810-277148:1:exon

DMP02_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01280
old locus tag: RVIR1_02590
so part of: sequence
location: 277034..278149
location: region:277034-278149:1
so has part: feature:277034-278149:1:exon
subclass of: SO_0000010

position:277034:1
position: 277034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278149:1
position: 278149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277034-278149:1:exon

DMP02_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01280
old locus tag: RVIR1_02590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011947206.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MPGLVKRGNIWHINKKVNGRRISESTGSGSLEEAERYLVRRLEQIRQASVYGIRPKRTFREAATKYLEEKDKSSLHVDAIYLKRLDQYIGDLPLDSIHMDSLRHYIQERTQQGVKRRTINCGLQVVRHILNLAEYEWKDEYNLSWLHKAPKIKLLRETDKREPYPLQLDEQARLLSELPLHLQHMALFAVNTGCRDHEVCHLQWKWEIKISEGSVFIIPAADVKNREKRLVVLNKNALRVIEEVRGEHSDYVFTFRGKPITRMLNSAWKKARARAGLPQVRVHDLKHTFGHRLRSAEVSFEDRQVLLGHKTQSVTTHYSAAELGNLIRAANKVCETGKHLVVLRKSGLVDTSRAKVAQGNLQEIKTSLRLV
SIO_010081: DMP02_RS01280
subclass of: SO_0000673
so part of: DMP02_RS01280
location: 277034..278149
location: region:277034-278149:1
so has part: feature:277034-278149:1:exon

WP_232019585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277034-278149:1:exon

DMP02_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01285
old locus tag: RVIR1_02600
so part of: sequence
location: complement(278174..278249)
location: region:278174-278249:-1
so has part: feature:278174-278249:-1:exon
subclass of: SO_0000663

position:278174:-1
position: 278174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278249:-1
position: 278249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278174-278249:-1:exon

DMP02_RS01285
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01285
old locus tag: RVIR1_02600
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(278214..278216),aa:Lys,seq:ttt)
SIO_010081: DMP02_RS01285
subclass of: SO_0000673
so part of: DMP02_RS01285
location: complement(278174..278249)
location: region:278174-278249:-1
so has part: feature:278174-278249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278174-278249:-1:exon

DMP02_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01290
old locus tag: RVIR1_02610
so part of: sequence
location: complement(278254..278329)
location: region:278254-278329:-1
so has part: feature:278254-278329:-1:exon
subclass of: SO_0000663

position:278254:-1
position: 278254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278329:-1
position: 278329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278254-278329:-1:exon

DMP02_RS01290
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01290
old locus tag: RVIR1_02610
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(278294..278296),aa:His,seq:gtg)
SIO_010081: DMP02_RS01290
subclass of: SO_0000673
so part of: DMP02_RS01290
location: complement(278254..278329)
location: region:278254-278329:-1
so has part: feature:278254-278329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278254-278329:-1:exon

DMP02_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01295
old locus tag: RVIR1_02620
so part of: sequence
location: complement(278350..278426)
location: region:278350-278426:-1
so has part: feature:278350-278426:-1:exon
subclass of: SO_0000663

position:278350:-1
position: 278350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278426:-1
position: 278426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278350-278426:-1:exon

DMP02_RS01295
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01295
old locus tag: RVIR1_02620
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(278390..278392),aa:Arg,seq:tct)
SIO_010081: DMP02_RS01295
subclass of: SO_0000673
so part of: DMP02_RS01295
location: complement(278350..278426)
location: region:278350-278426:-1
so has part: feature:278350-278426:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278350-278426:-1:exon

DMP02_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01300
old locus tag: RVIR1_02630
so part of: sequence
location: complement(278527..278603)
location: region:278527-278603:-1
so has part: feature:278527-278603:-1:exon
subclass of: SO_0000663

position:278527:-1
position: 278527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278603:-1
position: 278603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278527-278603:-1:exon

DMP02_RS01300
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01300
old locus tag: RVIR1_02630
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(278567..278569),aa:Pro,seq:tgg)
SIO_010081: DMP02_RS01300
subclass of: SO_0000673
so part of: DMP02_RS01300
location: complement(278527..278603)
location: region:278527-278603:-1
so has part: feature:278527-278603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278527-278603:-1:exon

DMP02_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01305
old locus tag: RVIR1_02640
so part of: sequence
location: 278849..282289
location: region:278849-282289:1
so has part: feature:278849-282289:1:exon
subclass of: SO_0000010

position:278849:1
position: 278849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282289:1
position: 282289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278849-282289:1:exon

DMP02_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01305
old locus tag: RVIR1_02640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035438.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-[ACP]--phospholipid O-acyltransferase
translation: MPALPQFSLLKSQRFLPLFIIQFFGAFNDNVFKNALIVLITYQFVSQSKLWQELSVTLAAGLFILPFFLFSALAGQLADKLSKRNLIIIIKCLELAFMALASLGFYLHAVGLLMLTLFLMGTHSTFFGPIKYAILPDLLQKNELLGGNALIEASTFIAILLGTLLGGFLIVAQAGITWVSIIMLSASVMGLLASFYVPTTPKANPHLKINPRFIQATFEIIRQVKTEKKVFWAILAISWFWLIGATFLTQFPIFSKNFLKANASVVTIFLAIFTVGVALGSLLCNRLLKQKIGMQWIPLSLWLMSFFMIDLYFASRHLPLLTKGSHSLIGLRDFFYSISHWRICLDLLGLSMSAGVYIVPLYTLIQIDTVIGHRARSIAANNIINSLFIVVGSLVVLFLFKIDLSIIQIFLLLGILNLVIAMVTIFFIPEGLIKPVLRWVLKHLYDVKLTGFEHYKSAGDSVVIVANHTSFLDVVLLYAFLPDDLLFAINRFTARIWWVRPFLYFAKVFELDPLNPLAIKTLIHEVKRPGKCVIFPEGRITTTGALMKLYEGPGLIADHAKANLLPIRLQGAQYTHFSRLRGKVQIRWFPKISITILPPRRFVVDPTMSSRKRRQLIGVQLYEIMVEMLFRSTDYKKTLFQSFLEAKAIHKGPTKVLEDITRVPLNYNQLLTRCFILGSAIDRLTEYQETVGLLLPNMIGAVVTFFTLQAYGRVPALLNYSAGSAQIEAACRVAKIRCVLTSRKFIEAADLFNIILALSEQAIQIVYLEDIKAEISWKDKLRAALLSRFPHYYYHRKLKKITNTSDPAVVLFTSGSEGEPKGVVLSHENIQANMAQMTTQIDFNQKDIFFSALPLFHAFGLTACVILPIYHGIKTFIYPSPLHYRKVPNMIYECNATITFGTDTFLAGYGRYAHPYDFYSIRYVFAGAEKLKEKTRKLWMEKFGIRIFEGYGVTEASPVISVNTPMQNKPGTVGNFLPGIRYEIEPVAHIKDGGRLLVSGPNIMLGYLSAEQPGEIMPPSHGWYDTGDIVEVDGDGYLSIKDRAKRFAKISGEMVSLTAVENAIYDLWPDKHHAVLTIADARKGEQLILVTEYKLATRNDLLKFYQEKGLSELNLPRRLYFIDVMPLLGSGKVSYMEVKKWLENQR
SIO_010081: DMP02_RS01305
subclass of: SO_0000673
so part of: DMP02_RS01305
location: 278849..282289
location: region:278849-282289:1
so has part: feature:278849-282289:1:exon

WP_232019586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278849-282289:1:exon

DMP02_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01310
old locus tag: RVIR1_02650
so part of: sequence
location: complement(282305..283600)
location: region:282305-283600:-1
so has part: feature:282305-283600:-1:exon
subclass of: SO_0000010

position:282305:-1
position: 282305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283600:-1
position: 283600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282305-283600:-1:exon

DMP02_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01310
old locus tag: RVIR1_02650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-associated recombination protein A
translation: MSTQYFTRPLADRLRPTCIDDFFGQSHLLGPGKSLRYTLVQGQLHSMILWGPPGTGKTTLAKIMANHAKARFESLSALLVGVKEIRNIAERAQSALNAEYPQNTLVFIDEIHRFNKSQQDALLPYIESGLFILIGATTENPSFELNNALLSRTRVYVLKKLSSEDIIDIINRALTNQEFGLGKQSLIITESAKKQLSMIADGDARQALNLLEIAADLAENNAIDEKTLQLITQTNLRRFDKQGEFFYDQISALHKSVRGTDPDAALYWLARMLDGGCDPLYIARRIVRMASEDIGNADPRGLQLALDAWEVQERLGSPEGELALAQAIVYLACTAKSNAVYTAFNAAMADAKEHGSLEVPLHLRNAPTKLMRHLNYGKDYHYAHNEADAYVHGECYFPEELADKQYYFPVPRGLELKIAEKLARLKKPQKT
SIO_010081: DMP02_RS01310
subclass of: SO_0000673
so part of: DMP02_RS01310
location: complement(282305..283600)
location: region:282305-283600:-1
so has part: feature:282305-283600:-1:exon

WP_126322309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282305-283600:-1:exon

DMP02_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rimK
locus tag: DMP02_RS01315
old locus tag: RVIR1_02660
so part of: sequence
location: complement(283660..284550)
location: region:283660-284550:-1
so has part: feature:283660-284550:-1:exon
subclass of: SO_0000010

position:283660:-1
position: 283660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284550:-1
position: 284550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283660-284550:-1:exon

DMP02_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rimK
locus tag: DMP02_RS01315
old locus tag: RVIR1_02660
EC number: 6.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035602.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6--L-glutamate ligase
translation: MKIAILSRRSQLYSTRRLAEEATKRGHDVKIIDTLRCYMNITSKNPSIHYKGKILDKFDAIIPRIGASITFYGAALVRQFEMMGTFVANDSIAITRAQDKLRSLQLLSRKGVGLPITGFAYSPDDIQDLISMVGGPPLVIKILEGTQGIGVVLAETQQAATSVIEAFLDLQAHIMVQEYIKEAKAADIRCFVVNGKVIAAMERQAKIGEFRSNIHRGGTIRLAKLTEEERTAAIHAAKVIGLNIAGVDLLRSNRGPLIMEVNSSPGLEGIEKATKKNVAEIIIKFIEKKGGKHRLI
SIO_010081: DMP02_RS01315
subclass of: SO_0000673
so part of: DMP02_RS01315
location: complement(283660..284550)
location: region:283660-284550:-1
so has part: feature:283660-284550:-1:exon

WP_126322310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283660-284550:-1:exon

DMP02_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01320
old locus tag: RVIR1_02670
so part of: sequence
location: complement(284560..284988)
location: region:284560-284988:-1
so has part: feature:284560-284988:-1:exon
subclass of: SO_0000010

position:284560:-1
position: 284560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284988:-1
position: 284988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284560-284988:-1:exon

DMP02_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01320
old locus tag: RVIR1_02670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RimK/LysX family protein
translation: MEAPTPIGWREWVSLPELGIRHLKAKVDTGARTSALHAFSVKVLESTSQKKKVCFIIRPHSRHSPKKMIKCVAELIDIRQITDSGGHKERRCVIKTPIVIGKHSWPIEITLTSRDSMRFKMLLGRTALKGFIVDPCRSYLIV
SIO_010081: DMP02_RS01320
subclass of: SO_0000673
so part of: DMP02_RS01320
location: complement(284560..284988)
location: region:284560-284988:-1
so has part: feature:284560-284988:-1:exon

WP_126322311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284560-284988:-1:exon

DMP02_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01325
old locus tag: RVIR1_02680
so part of: sequence
location: complement(284990..285385)
location: region:284990-285385:-1
so has part: feature:284990-285385:-1:exon
subclass of: SO_0000010

position:284990:-1
position: 284990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285385:-1
position: 285385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284990-285385:-1:exon

DMP02_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01325
old locus tag: RVIR1_02680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MMISNRSYLLRAFYDWITDSQLTPYILLDAEFPHVEVPTQYVKDGKITLNISLDAVLNLKIDTKAIQFDASFGGQSMLVYAPIKAVLAIYARENGQGMVFSEEDSQQGDGTPSTPPPRVRDGKRPDLRIVK
SIO_010081: DMP02_RS01325
subclass of: SO_0000673
so part of: DMP02_RS01325
location: complement(284990..285385)
location: region:284990-285385:-1
so has part: feature:284990-285385:-1:exon

WP_197720788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284990-285385:-1:exon

DMP02_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01330
old locus tag: RVIR1_02690
so part of: sequence
location: complement(285387..286043)
location: region:285387-286043:-1
so has part: feature:285387-286043:-1:exon
subclass of: SO_0000010

position:285387:-1
position: 285387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286043:-1
position: 286043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285387-286043:-1:exon

DMP02_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01330
old locus tag: RVIR1_02690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035035.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase N-terminal domain-containing protein
translation: MAQPAGKRSTMSLYMRHDDPYSHRVRIVLAEKMISAEMFDVSTTEFPSNFLENNPYGSVPTIIDRELVLYETNIITEYLDERYPHPPLLPVYPIARARSRQMIYRIERNWYPLLQQIENTLKNDKVADLGKVKLAQETLENSLNSISPVFEGKEYFMSNEFTLVDCCLAPLLWRLRSLNSQKNKPSALERPIQLYEERVFTRPSFKATLSEVEFGVKT
SIO_010081: DMP02_RS01330
subclass of: SO_0000673
so part of: DMP02_RS01330
location: complement(285387..286043)
location: region:285387-286043:-1
so has part: feature:285387-286043:-1:exon

WP_126322312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285387-286043:-1:exon

DMP02_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpsI
locus tag: DMP02_RS01335
old locus tag: RVIR1_02700
so part of: sequence
location: complement(286686..287120)
location: region:286686-287120:-1
so has part: feature:286686-287120:-1:exon
subclass of: SO_0000010

position:286686:-1
position: 286686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287120:-1
position: 287120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286686-287120:-1:exon

DMP02_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpsI
locus tag: DMP02_RS01335
old locus tag: RVIR1_02700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MPLKQHYGTGRRKTATARVFLKKGGTGLINVNGRSLENYFGRETARMVVRQPLEVVDQLGKFDINVTVAGGGSSGQAGAVRHGISRALMAYDEATDVSIDGSENDASFRRLLRRAGLVTRDARKVERKKIGRHKARKGTQYSKR
SIO_010081: DMP02_RS01335
subclass of: SO_0000673
so part of: DMP02_RS01335
location: complement(286686..287120)
location: region:286686-287120:-1
so has part: feature:286686-287120:-1:exon

WP_126323472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286686-287120:-1:exon

DMP02_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rplM
locus tag: DMP02_RS01340
old locus tag: RVIR1_02710
so part of: sequence
location: complement(287142..287576)
location: region:287142-287576:-1
so has part: feature:287142-287576:-1:exon
subclass of: SO_0000010

position:287142:-1
position: 287142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287576:-1
position: 287576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287142-287576:-1:exon

DMP02_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rplM
locus tag: DMP02_RS01340
old locus tag: RVIR1_02710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035063.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTLMAKTGQIERKWHLIDASGKTLGRLATQIAHMLRGKHKAEFTPHVDTGDYVVVINAEKVAVTGKKTTDKQYERYTGYPGGLKTITFDKLQQSFPARIIEKAVKGMLPKNPLGYAMITKLKVYAGSSHPHSAQNPSATAIDS
SIO_010081: DMP02_RS01340
subclass of: SO_0000673
so part of: DMP02_RS01340
location: complement(287142..287576)
location: region:287142-287576:-1
so has part: feature:287142-287576:-1:exon

WP_126322313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287142-287576:-1:exon

DMP02_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hemB
locus tag: DMP02_RS01345
old locus tag: RVIR1_02720
so part of: sequence
location: 287921..288922
location: region:287921-288922:1
so has part: feature:287921-288922:1:exon
subclass of: SO_0000010

position:287921:1
position: 287921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288922:1
position: 288922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287921-288922:1:exon

DMP02_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hemB
locus tag: DMP02_RS01345
old locus tag: RVIR1_02720
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035878.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MRNFPYTRLRRLRQSDFSRRLVRETRLSCDDLICPLFLLPGENRRQAIDSMPGIERLSLDLLLEEVAVLQRLKIPAIALFPVIPIQDKTLNAKQAYDPEGLIPKAIRALKKNFPEMGVITDIALDPYTSHGHDGVMNEQGYILNDETIALLVKQALCYAEAGVDAVAPSDMMDGRIGRVRQALESKGYTNTQIIAYSAKYASHFYGPFRDAVGSAGNLKNADKMTYQMDPANGDEALHEVALDLAEGADIVMVKPGMPYLDVVYRIKQQFAVPTFVYQVSGEYAMQKAAIAQGFLKEYESVMEGLVGFKRAGADAILTYFAKQVAGWLTNPSE
SIO_010081: DMP02_RS01345
subclass of: SO_0000673
so part of: DMP02_RS01345
location: 287921..288922
location: region:287921-288922:1
so has part: feature:287921-288922:1:exon

WP_126323473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287921-288922:1:exon

DMP02_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01350
old locus tag: RVIR1_02730
so part of: sequence
location: 288962..289046
location: region:288962-289046:1
so has part: feature:288962-289046:1:exon
subclass of: SO_0000663

position:288962:1
position: 288962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289046:1
position: 289046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288962-289046:1:exon

DMP02_RS01350
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01350
old locus tag: RVIR1_02730
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:288996..288998,aa:Leu,seq:tag)
SIO_010081: DMP02_RS01350
subclass of: SO_0000673
so part of: DMP02_RS01350
location: 288962..289046
location: region:288962-289046:1
so has part: feature:288962-289046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288962-289046:1:exon

DMP02_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: tig
locus tag: DMP02_RS01355
old locus tag: RVIR1_02740
so part of: sequence
location: 289138..290475
location: region:289138-290475:1
so has part: feature:289138-290475:1:exon
subclass of: SO_0000010

position:289138:1
position: 289138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290475:1
position: 290475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289138-290475:1:exon

DMP02_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: tig
locus tag: DMP02_RS01355
old locus tag: RVIR1_02740
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:TIGR00115.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MNDMQVSVENVGRLNRRLSVIVPSNQLEQHKKNRLAELAKKTRLDGFRPGKVPTHVVEKLYGDSVWGEVIQESLRTSLSAALQKNALNPAGQPHIDSIKAEPGNDLEYTASFEVYPQVSAPELKSVSLEKLKVDISEADIAEVLEKMRHQHADWIEIQRKAQQGDKVTFDLILSDGTEPRKDLEWVLEEGKMPEGFAGLFGSAAGDTLNISLAGGDKEKQAEKENSATVQVKKVSEPKLAELDDAFAQRLGIHEGGMETLRTQIRQHMQNELDRILREKLKTQVIDKLIELYAIEELPQVLLDQEFQRLEAELKGQQKQQGKSSDDPLSEKAKNDLQAAAHRRVTLGLLFSAVIETHQLQADEARVLQEVERLASAFQFEQSIRERLYKDKNMMLNIRSSVLEEQVMDKLLEEAEYTEKTVKYNEMMNLSTKTQEESTKAGRITT
SIO_010081: DMP02_RS01355
subclass of: SO_0000673
so part of: DMP02_RS01355
location: 289138..290475
location: region:289138-290475:1
so has part: feature:289138-290475:1:exon

WP_172593953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289138-290475:1:exon

DMP02_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: clpP
locus tag: DMP02_RS01360
old locus tag: RVIR1_02750
so part of: sequence
location: 290561..291226
location: region:290561-291226:1
so has part: feature:290561-291226:1:exon
subclass of: SO_0000010

position:290561:1
position: 290561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291226:1
position: 291226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290561-291226:1:exon

DMP02_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: clpP
locus tag: DMP02_RS01360
old locus tag: RVIR1_02750
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035064.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp endopeptidase proteolytic subunit ClpP
translation: MHITNFSKEVSNSLLVPMVVEQSGRGERAYDIYSRLLKDRIIFVVGPIEDHMANLIIAQMLFLESENPDKDIFLYINSPGGVVTSGLAIYDTMQFIKPDVSTMCIGQAASAAALLLCGGAKGKRHCLPHARMMIHQPLGGYQGQATDIEIHTREMLLVRERINRIMAKHTGKDTQQILRDTDRDNFMGAQQAIDYGLIDAMLEARAGAGQAKEALETSSIE
SIO_010081: DMP02_RS01360
subclass of: SO_0000673
so part of: DMP02_RS01360
location: 290561..291226
location: region:290561-291226:1
so has part: feature:290561-291226:1:exon

WP_126322315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290561-291226:1:exon

DMP02_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: clpX
locus tag: DMP02_RS01365
old locus tag: RVIR1_02760
so part of: sequence
location: 291320..292651
location: region:291320-292651:1
so has part: feature:291320-292651:1:exon
subclass of: SO_0000010

position:291320:1
position: 291320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292651:1
position: 292651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291320-292651:1:exon

DMP02_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: clpX
locus tag: DMP02_RS01365
old locus tag: RVIR1_02760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034999.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MTGSINDKTSEPCYCSFCGKSQNEVYKLITGPSIFICNECVNLCSEILKEEFQEETPRQEGGALPIPKPVEIHAVFNEFVIGQEFAKKILSVAAYNHYKRLDLIKKACLHPLNVKDDTELSKSNVLLIGPTGSGKTLLAKTLARLFNLPFAIADATTLTEAGYVGNDVENILQKLLQAANGNVERAQLGIVYIDEIDKISRRAESPSITRDVSGEGVQQGLLKLLEGTVASVPLQGGRKHPNQETVQIDTTNILFICGGTFSGLEKIIRERTERTGIGFAADVRSKEDKSRSAALFAKLESEDLVKYGIIPELIGRLPVIATLDELDEKILIQILKEPKNALIKQYLKLFKMDNAELEFREDALQVIARKALERKTGARGLRSILENVLLDIMYELPSMQNVSKVVIEAATINKGAKPLVIYKREKDNNVDNISSREIAAGSE
SIO_010081: DMP02_RS01365
subclass of: SO_0000673
so part of: DMP02_RS01365
location: 291320..292651
location: region:291320-292651:1
so has part: feature:291320-292651:1:exon

WP_126322316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291320-292651:1:exon

DMP02_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: lon
locus tag: DMP02_RS01370
old locus tag: RVIR1_02770
so part of: sequence
location: 292817..295282
location: region:292817-295282:1
so has part: feature:292817-295282:1:exon
subclass of: SO_0000010

position:292817:1
position: 292817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295282:1
position: 295282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292817-295282:1:exon

DMP02_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: lon
locus tag: DMP02_RS01370
old locus tag: RVIR1_02770
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035440.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MSTETKSSETLPLLPLRDVVVYSHMVIPLFVGRKQSIKALEAAMASKLADKKILLIAQKNPAEDNPNTEGFYEVGTIATILQLLKLPDGTVKVLVEGFQRGHVKEFIDEKDYISAKIEVVEIPPVELSQEIEVLTRTVLAQFEQYVKLNKKIPLEILSTLSSIDNPGRLTDMIAAHLTLKIQEKQEILEIFPLKARLEKLLAFLESEIDLLQMQKRIRGRVKKQMEKSQREYYLNEQVKAIQKELGESQGVGNELDDIAKRIEKAKMPKEAKEKALAEFNKLKSMSPMAAEATVSRNYLDWVLSIPWSKRSRVLFDLDKAQKILQEAHYGLDKVKERVIEFLAVHQRVKKLKGPILCLVGPPGVGKTSLGQSIAKAIGREFNRMSLGGVRDEAEIRGHRRTYIGSMPGRIMQKMAKVGVKNPLFMLDEIDKMAMDFRGDPASALLEVLDPEQNHAFDDHYLEVSYDLSEVLFIATANTLNIPPALLDRMEVIRIPGYTEDEKINIAKQHLLPKQLKQNGLKIATKKKELVLSENALKDIIRYYTREAGVRSLEREIAKICRKVVTEIARKPSLKSVKVTEQNLEKYLGVRRFRYGLVEEHDQVGQVSGLAWTEVGGELLTIEATVIPGKGKTTYTGHLGEVMQESIQAALTVVRSRAEVLGIPINFYEKNDIHVHVPEGATPKDGPSAGIGMCTALVSAITKNPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIRKVIIPEENKRDLKEIPANIQEGLTIYPVRWIDQVLDIALLHPTKPLSRSKSKQKRNKKNMLPGKLMSKKIQQKDSPTTNAH
SIO_010081: DMP02_RS01370
subclass of: SO_0000673
so part of: DMP02_RS01370
location: 292817..295282
location: region:292817-295282:1
so has part: feature:292817-295282:1:exon

WP_126322317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292817-295282:1:exon

DMP02_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01375
old locus tag: RVIR1_02780
so part of: sequence
location: 295409..295699
location: region:295409-295699:1
so has part: feature:295409-295699:1:exon
subclass of: SO_0000010

position:295409:1
position: 295409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295699:1
position: 295699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295409-295699:1:exon

DMP02_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01375
old locus tag: RVIR1_02780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKSDLIEVIVESAGIPKNIAGKTLDKILQSITHALKKGEDVALIGFGTFKVNERKARTGRNPKTGEVLQIPASNVASFKVGKGLKDAVQSLGQKE
SIO_010081: DMP02_RS01375
subclass of: SO_0000673
so part of: DMP02_RS01375
location: 295409..295699
location: region:295409-295699:1
so has part: feature:295409-295699:1:exon

WP_126322318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295409-295699:1:exon

DMP02_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01380
old locus tag: RVIR1_02790
so part of: sequence
location: 295742..295817
location: region:295742-295817:1
so has part: feature:295742-295817:1:exon
subclass of: SO_0000663

position:295742:1
position: 295742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295817:1
position: 295817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295742-295817:1:exon

DMP02_RS01380
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01380
old locus tag: RVIR1_02790
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:295775..295777,aa:Val,seq:tac)
SIO_010081: DMP02_RS01380
subclass of: SO_0000673
so part of: DMP02_RS01380
location: 295742..295817
location: region:295742-295817:1
so has part: feature:295742-295817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295742-295817:1:exon

DMP02_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01385
old locus tag: RVIR1_02800
so part of: sequence
location: 295827..295903
location: region:295827-295903:1
so has part: feature:295827-295903:1:exon
subclass of: SO_0000663

position:295827:1
position: 295827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295903:1
position: 295903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295827-295903:1:exon

DMP02_RS01385
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01385
old locus tag: RVIR1_02800
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:295861..295863,aa:Asp,seq:gtc)
SIO_010081: DMP02_RS01385
subclass of: SO_0000673
so part of: DMP02_RS01385
location: 295827..295903
location: region:295827-295903:1
so has part: feature:295827-295903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295827-295903:1:exon

DMP02_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01390
old locus tag: RVIR1_02810
so part of: sequence
location: 295942..297390
location: region:295942-297390:1
so has part: feature:295942-297390:1:exon
subclass of: SO_0000010

position:295942:1
position: 295942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297390:1
position: 297390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295942-297390:1:exon

DMP02_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01390
old locus tag: RVIR1_02810
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SurA N-terminal domain-containing protein
translation: MLQSIRDRTHGWLTSVVIGLLIIMFALWGVHGYLELQNEGGDKVVAKVAGQKLSQREFDVAYQRVYQQAKAQLGTESLNKELVKQLKKQTLEQWMLTQVLAHAAAEDRYRLSPSSIDSVLLHMPLFQSAGRFSSARFYAVLDAMGYTELGFLSDLKKTLLINQVQQGLTGTAFVLPSEVSQAMALIHQKRDFAYIVIPSSQFSAEQLPISEAQALAYYQKNTNHFVQPEQVSIDYIKLSLAALKDDKTFVERRDKLANLSYTHPDSLQQAAQALNLPIQSTPLFGQKGGNDVLTKNPKIIAAAFSQDSLQGNNSPVIDLDADTAIVLRVKQHKASAIQAFSAVKTHIIDMLRKQQVIEKNYTLGQGLLKELKEKGSFSDSEKNKRDLHWQLLNQVERNTDKPSAEIVKAVFNLPATKNEIAGFALANGDYVLIKLLGVHEGDSQQYPSSQKNMATQALEREFARRDYDLYVQGLMQKAHSVS
SIO_010081: DMP02_RS01390
subclass of: SO_0000673
so part of: DMP02_RS01390
location: 295942..297390
location: region:295942-297390:1
so has part: feature:295942-297390:1:exon

WP_126322319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295942-297390:1:exon

DMP02_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01395
old locus tag: RVIR1_02820
so part of: sequence
location: complement(297385..299601)
location: region:297385-299601:-1
so has part: feature:297385-299601:-1:exon
subclass of: SO_0000010

position:297385:-1
position: 297385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299601:-1
position: 299601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297385-299601:-1:exon

DMP02_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01395
old locus tag: RVIR1_02820
inference: COORDINATES: protein motif:HMM:NF019334.2
GO function: GO:0004672 - protein kinase activity [Evidence IEA]
GO process: GO:0006468 - protein phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein kinase
translation: MMTITDSISLAEHFSQMQPGETLSGLSFDLIDEHEGCISLENSTILCRERHSTKKDPNKIKQLGYRFEVFTRDSLGNGVFGQVYPISATLKLNTQGHIEILKDTKQRVVKILDSPGWPTRDETLIGIHIPYLHMKPTIQDSELIRYIIMHKVPGKNLGELLRNGTIKELPKKIKFLLLIRILEAIKNLHSDGIIHLDIKPDNIMVHFEPGNIDPKINIIDFGCSEYSKYKNGSNIDEQTYHDQKDPNSDIRSLINRTLSEINTVMEYPNTLVRLIENASASNFSNPLFLQNAIKELTAIYTYLDKKTMFDEHFQETQKIGELHFHEPRPGLFRLDTIQGEKALAGHFQGQTGYIPQYLDAEKTQINPLRYFINETNKIIVFASPIEAVNLSTYLNALKTYSILENIDDYHLVIPLIGQGITERHIVSYYKAPGTKSIPHIFDSKRGDPKRFFNSKENSAIPNVNYVSLETQSFFDPVSCGYHGLANIANIVLLIQAGKPVNTTSLLKTLEKNNLNNFSIPLLKNSDIPLKINYFAFIQQAWRDTFFSGLNQQEITALTFKHYFLGWPIENAAWKKMLYTTLLGFLFYPLINTLKLLIELPIQILKNSADYIKNQLFLWAPTSAVLQYLRNSLLLTNYLFYGVLKGLSLIIHMSLSLIPTPCTLNAQQKEAINNGISIKVDDTTSDYDFVDMNDWVVKSHYPETTKPSNASAKFFKPATLQAEEQRQEESIESSASNRL
SIO_010081: DMP02_RS01395
subclass of: SO_0000673
so part of: DMP02_RS01395
location: complement(297385..299601)
location: region:297385-299601:-1
so has part: feature:297385-299601:-1:exon

WP_172593954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297385-299601:-1:exon

DMP02_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ispD
locus tag: DMP02_RS01400
old locus tag: RVIR1_02830
so part of: sequence
location: complement(299654..300349)
location: region:299654-300349:-1
so has part: feature:299654-300349:-1:exon
subclass of: SO_0000010

position:299654:-1
position: 299654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300349:-1
position: 300349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299654-300349:-1:exon

DMP02_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ispD
locus tag: DMP02_RS01400
old locus tag: RVIR1_02830
EC number: 2.7.7.60
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035298.1
GO function: GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
translation: MKQSSADYFVIVPAAGVGTRMKNDIPKQYLTINGKCILEYTLNTLLNYPTFEKCMVVINENEHDKNWPSIKLTHPKLITTTGGKERVNSVFNGLIALKPFIKENDWVLVHDAARPFLHPSDIDKLITEIGDDPLGGLLGSPSKNTIKRIENKHCLETLDRQKIWQALTPQMFRYHWLFKALNSAIEKQQTITDESNAIELLGEHPRMIEGRADNIKITDNYDLVFFKYYYT
SIO_010081: DMP02_RS01400
subclass of: SO_0000673
so part of: DMP02_RS01400
location: complement(299654..300349)
location: region:299654-300349:-1
so has part: feature:299654-300349:-1:exon

WP_126322321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299654-300349:-1:exon

DMP02_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: cysQ
locus tag: DMP02_RS01405
old locus tag: RVIR1_02840
so part of: sequence
location: 300376..301182
location: region:300376-301182:1
so has part: feature:300376-301182:1:exon
subclass of: SO_0000010

position:300376:1
position: 300376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301182:1
position: 301182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300376-301182:1:exon

DMP02_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: cysQ
locus tag: DMP02_RS01405
old locus tag: RVIR1_02840
EC number: 3.1.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012570239.1
GO function: GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'(2'),5'-bisphosphate nucleotidase CysQ
translation: MNSLLSNIVSLAKQAGKQILSIYHSDFTVEYKADKSPVTAADMAAHQTIYQGLKQITPEIPILSEELTTTDFAERRHWQRYWLIDPLDGTKEFLEKNGEFTINIALIENHVPTLGVIYAPAFDFCYFAGADQGAFKQMAEQEAALLQTSSWKKDSSIIIAISRRHGTDSLQHFLAQFPALNLLRCGSALKFCWLAEGFADVYPRFSPTSEWDTAAGQCILKEAGGTLIDSQGQILRYNTKPSLRNTAFLAVGDKSHAWANYFVYTLRT
SIO_010081: DMP02_RS01405
subclass of: SO_0000673
so part of: DMP02_RS01405
location: 300376..301182
location: region:300376-301182:1
so has part: feature:300376-301182:1:exon

WP_126322322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300376-301182:1:exon

DMP02_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01410
old locus tag: RVIR1_02850
so part of: sequence
location: 301318..302331
location: region:301318-302331:1
so has part: feature:301318-302331:1:exon
subclass of: SO_0000010

position:301318:1
position: 301318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302331:1
position: 302331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301318-302331:1:exon

DMP02_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01410
old locus tag: RVIR1_02850
EC number: 1.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597934.1
GO function: GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO process: GO:0006108 - malate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate dehydrogenase
translation: MLKKSITVAVTGAAGQIGYALLFRIASGQMFGPDQPVKLHLLELEKSLPALHGIAMELDDCAFPLLEKIVCTRQMHEAMQGANWAILVGSMPRRDGMERADLLKINGGIFAPQGKAINDYAADDVRTFVVGNPCNTNCLIAMHHAPDVPRDRFFAMTLLDENRARSQLAKKAGVSVQEVSQLAIWGNHSSTQYPDFYNAKISGKPVIETISDENWLRNDFISLVQKRGAAVIKARGASSAASAANAVVGSVYHLTHETKQDDYFSIAFCSKGEYGIDEDLIFSFPSQVDAKGRLTIVENIQHNAFGKEKLLLTLNELRAERDEIKKLGLIESKLGVS
SIO_010081: DMP02_RS01410
subclass of: SO_0000673
so part of: DMP02_RS01410
location: 301318..302331
location: region:301318-302331:1
so has part: feature:301318-302331:1:exon

WP_126322323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301318-302331:1:exon

DMP02_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01415
old locus tag: RVIR1_02860
so part of: sequence
location: complement(302474..304735)
location: region:302474-304735:-1
so has part: feature:302474-304735:-1:exon
subclass of: SO_0000010

position:302474:-1
position: 302474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304735:-1
position: 304735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302474-304735:-1:exon

DMP02_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01415
old locus tag: RVIR1_02860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA translocase FtsK
translation: MQRLREGLLIASVALALFLVLALWTYHPGIHSKASMNIAGHLGDTLAHLFFTGVGSLAYLFPVLLLYSGWQGFKGQFNTDISYAFLALRLFGFIVVFIAACGLASLHSTHAVHGYTPGGLLGAIVTKNFIAQFNVVGSTVFLLALLLASTTLATGFSWLNSLHKISQQVSALLSQGYETIKRLCNHLKKSLARKEKTPIDSIRKPKLNINSKPLTPHANSITVSPFQDTDPTPYSPSIPIKPYSPPATITPSKKVSTSAALPSLSLLDPAEASNKEGYSRAELERLSRDVELRLKDFGIQVHVVAVHPGPVVTRFEMELAAGVKVSRITGLAKDLARSLSVVSVRIVEVIPGKSVVGLEVPNKHREIVRLSEILTSNSYQQARSPLSLALGKDIAGHPVIVDLGKMPHLLVAGTTGSGKSVGLNAMLLSILYKATPQEVRLIMIDPKMLELAIYEGIPHLLAPVVTDMKEAANALRWGVAEMERRYKLMANLGVRNLAGYNQKIQEAQVKGSPIHDPFWTPEQGGQAEPLMQLPYIIVLIDEFADMMMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQQGADQLLGHGDMLYLAPGTGVPIRVHGAFVADQEVHDVVKALKQSGTPEYMLDLTQATLEASDPYAEFADSNGGEKDALYDQAVQIVLETRRASISSVQRRLKIGYNRAARLMEDMERAGLVSAMENNGNREILVPDRLNE
SIO_010081: DMP02_RS01415
subclass of: SO_0000673
so part of: DMP02_RS01415
location: complement(302474..304735)
location: region:302474-304735:-1
so has part: feature:302474-304735:-1:exon

WP_126323474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302474-304735:-1:exon

DMP02_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: trxB
locus tag: DMP02_RS01420
old locus tag: RVIR1_02870
so part of: sequence
location: 304927..305883
location: region:304927-305883:1
so has part: feature:304927-305883:1:exon
subclass of: SO_0000010

position:304927:1
position: 304927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305883:1
position: 305883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304927-305883:1:exon

DMP02_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: trxB
locus tag: DMP02_RS01420
old locus tag: RVIR1_02870
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011215743.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MNKAQKHRLIILGSGPAGYTAAIYAARANLNPLVITGMQQGGQLMTTTDVDNWPGDVEGLQGPALMERMLKHAERFKSQMVFDQINTVDLSKKPFILKGDQATYHCDALIIATGASARYLGLDSETEFTGKGVSACATCDGFFYKGQKVAVVGGGNTAVEEALYMANIAEHVMLIHRRDSFRSEKILIDKLMAKVKAGKITLVLDSVVEAIVGDEQGVNGVKIKNVKTQALSQLAVHGVFIAIGHTPNTALFQDQLKMEKGYILVKGGSQGAATATNIHGVFAAGDVADSVYRQAVTSAGTGCMAALDAEKYLDECAN
SIO_010081: DMP02_RS01420
subclass of: SO_0000673
so part of: DMP02_RS01420
location: 304927..305883
location: region:304927-305883:1
so has part: feature:304927-305883:1:exon

WP_126322324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304927-305883:1:exon

DMP02_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01425
old locus tag: RVIR1_02880
so part of: sequence
location: 305915..306649
location: region:305915-306649:1
so has part: feature:305915-306649:1:exon
subclass of: SO_0000010

position:305915:1
position: 305915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306649:1
position: 306649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305915-306649:1:exon

DMP02_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01425
old locus tag: RVIR1_02880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VacJ family lipoprotein
translation: MLKRLGFCLLLLVALPAFAEDASNDPYENYNRHAFKLNQTLDTIFLKPVATVYKTVLPWPVTKGISNFFNNLGQVPAIINDLLQADFYTATQDTWRLLINTTVGIGGFVDVASHINLPAHSQDFGLTLAKWGYRSSAYFVVPILGPSTVRDAISWPVNYGVFSVYPYINDISWRNGLAAGGFVNTRAQLLDFDQTIKQVSFDPYVFQRNAYLQRRNYLIKQNSHLVNTSDDKDDDDDDDDADIE
SIO_010081: DMP02_RS01425
subclass of: SO_0000673
so part of: DMP02_RS01425
location: 305915..306649
location: region:305915-306649:1
so has part: feature:305915-306649:1:exon

WP_126322325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305915-306649:1:exon

DMP02_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01430
old locus tag: RVIR1_02890
so part of: sequence
location: 306695..307174
location: region:306695-307174:1
so has part: feature:306695-307174:1:exon
subclass of: SO_0000010

position:306695:1
position: 306695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307174:1
position: 307174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306695-307174:1:exon

DMP02_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01430
old locus tag: RVIR1_02890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dps family protein
translation: MKETLNIGLTETKRKKTADGLIKLLANNYVLYLKTHNFHWNVVGSMFQPLHSLFEAQYIDLWNAADKIAERIRALGFFVPASYEDFAKLSKIKEAVGTKSVKAKSMISQLVGDQEIIIRLARELLPQIEETEDQVTVDLLSERMEVHEKNAWMLRSFLE
SIO_010081: DMP02_RS01430
subclass of: SO_0000673
so part of: DMP02_RS01430
location: 306695..307174
location: region:306695-307174:1
so has part: feature:306695-307174:1:exon

WP_126322326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306695-307174:1:exon

DMP02_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01435
old locus tag: RVIR1_02900
so part of: sequence
location: 307423..307824
location: region:307423-307824:1
so has part: feature:307423-307824:1:exon
subclass of: SO_0000010

position:307423:1
position: 307423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307824:1
position: 307824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307423-307824:1:exon

DMP02_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01435
old locus tag: RVIR1_02900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding protein
translation: MNKRLYVGGLSYGVDDDSLRELFQPHGDVKFVKVIRDFHSGRSKGFGFVEMNTPEEAKSAIDALNGSTHEGRSITVSEANPPDSSGGGNRGGARAGGGGSGGGYQQRRRSGGGMGGSGGGNGGGHRHREREEY
SIO_010081: DMP02_RS01435
subclass of: SO_0000673
so part of: DMP02_RS01435
location: 307423..307824
location: region:307423-307824:1
so has part: feature:307423-307824:1:exon

WP_126322327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307423-307824:1:exon

DMP02_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01440
old locus tag: RVIR1_02910
so part of: sequence
location: complement(307863..308603)
location: region:307863-308603:-1
so has part: feature:307863-308603:-1:exon
subclass of: SO_0000010

position:307863:-1
position: 307863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308603:-1
position: 308603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307863-308603:-1:exon

DMP02_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01440
old locus tag: RVIR1_02910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComF family protein
translation: MDINTWIRIAKKELIYSILPFTCILCSEEAKRAIDLCLDCEKDLPWLGHVCIHCAAPLNIATNTICGTCLKKPFPFYKTCIPFSYRGAIRSLITGLKFQQRLLYATILGNLLAKQIRLSYQKEHFPHLIIPVPLHKKRLRQRGFNQVMEIARYINKTLNISIDYKSCLRIRNTLPQSELPANQRRTNVKNAFALQTQKNLLNQHIALLDDVMTTGHTLTELSRILYDAGVKRIDVWCCARTYLDNF
SIO_010081: DMP02_RS01440
subclass of: SO_0000673
so part of: DMP02_RS01440
location: complement(307863..308603)
location: region:307863-308603:-1
so has part: feature:307863-308603:-1:exon

WP_126322328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307863-308603:-1:exon

DMP02_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: glmS
locus tag: DMP02_RS01445
old locus tag: RVIR1_02920
so part of: sequence
location: 308736..310571
location: region:308736-310571:1
so has part: feature:308736-310571:1:exon
subclass of: SO_0000010

position:308736:1
position: 308736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310571:1
position: 310571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308736-310571:1:exon

DMP02_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: glmS
locus tag: DMP02_RS01445
old locus tag: RVIR1_02920
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019232839.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVAATAQRNVVPILLEGLKRLEYRGYDSAGIALLDSHHQLQRRRTVGKVESLEKAITPEALSGKIGIAHTRWATHGKPSEANAHPHMSGSDIALVHNGIIENYLSLRHDLKKAGYQFESETDTEIIAHLLDHHLKKTKDFLSAVLQTIQRLEGAFALVFLYSQEPDSLIAVRKGSPLVVGLSKDENFIASDHLALLPVTQQFVYLQEGDIAQISSGKVVFFDSKGQMVQRSPYRSTLQHDVIDKGKYRHFMEKEIFEQPEAASAALEGRISQTQVLDGICGFQAVDKLTSIRRVQIVACGTSYHAGLIARYWLESWVGLPCQVEIASEFRYHPTLVEPDTLFITLSQSGETADTLEALRQAKTKNYAATLTICNAPESAMVRESDFVLLTRAGPEIGVASTKAFTTQLTVLLLLTALLGRHHGWDKKREQEWVSQLRTLPKLLEETLLLDKPIKQLAKLFRDKSNALFIARGIHFPVALEGALKLKEISYIHAEAYPAGELKHGPLALVDNDMPVIALLPSNALIDKLRSTIQEVRARGGQVILFAQDPLESEKAQGCQTIVLPKTSDDIISPLIFTIPLQLLAYHVAVLKGTDVDQPRNLAKSVTVE
SIO_010081: DMP02_RS01445
subclass of: SO_0000673
so part of: DMP02_RS01445
location: 308736..310571
location: region:308736-310571:1
so has part: feature:308736-310571:1:exon

WP_126322329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308736-310571:1:exon

DMP02_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: glmM
locus tag: DMP02_RS01450
old locus tag: RVIR1_02930
so part of: sequence
location: complement(310588..311925)
location: region:310588-311925:-1
so has part: feature:310588-311925:-1:exon
subclass of: SO_0000010

position:310588:-1
position: 310588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311925:-1
position: 311925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310588-311925:-1:exon

DMP02_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: glmM
locus tag: DMP02_RS01450
old locus tag: RVIR1_02930
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005770992.1
GO function: GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MTSPVRKYFGTDGIRGKVGDYPITPEFVLKLGWAIGRVLANGNNKVLIGKDTRISGYMFESALEAGLSAAGVDIYLLGPMPTPAIAYLTADLGAQAGIVISASHNPYVDNGIKFFSHEGTKLPDALECAIEAQLDNPLTTVEPAKLGRAHRIEDAKSRYVNFCKSTLPKNTNFNSFKIVLDCANGATYHIAPSLFSGLGADITVLGVTPNGLNINMDCGSTHLAMLQETVLAKKADIGIAFDGDGDRVLMVDHCGEIVDGDELLFLLAQHGVQTNTVQGGIVGTAMSNLGLEQALQKLGLDFVRAPVGDRYVNERLQATGWQLGGEASGHLISRNIIKTGDGIIIALQILVALQAAEQSLHAAKKGMQKFPQKLINISVKKPLLVAESATVKKAVAEAENKLSTRGRVLLRPSGTESVVRIMVEGEDAQQVQNIAEQLASIVKTV
SIO_010081: DMP02_RS01450
subclass of: SO_0000673
so part of: DMP02_RS01450
location: complement(310588..311925)
location: region:310588-311925:-1
so has part: feature:310588-311925:-1:exon

WP_126322330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310588-311925:-1:exon

DMP02_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ftsH
locus tag: DMP02_RS01455
old locus tag: RVIR1_02940
so part of: sequence
location: complement(311944..313860)
location: region:311944-313860:-1
so has part: feature:311944-313860:-1:exon
subclass of: SO_0000010

position:311944:-1
position: 311944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313860:-1
position: 313860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311944-313860:-1:exon

DMP02_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ftsH
locus tag: DMP02_RS01455
old locus tag: RVIR1_02940
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014578296.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MLKNLFLWLIIAVILISVFNNLEPRHNAGERLTYSEFLHNVQQGNVQSVTIQSNQVIKGQLLSDKAFTSYMPITDQYLLPELIKKGVNVKGEPPQQESFLMRIFINWFPMLLLIGVWIFFMRQMGGAGGKGALSFGRSRARLLGEDQVKVTFADVAGAEEAKEEVSELVEFLKDPAKFQKLGGKIPRGVLLMGPPGTGKTLLARAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVMAATNRPDVLDPALLRPGRFDRQVIVGLPDIRGREQILKVHLKKVPYGQDVNPDIIARGTPGFSGADLANLVNEAALFAARENKATVDMSDLEKAKDKVMMGTERRSMVMNEKEKQLTAYHEAGHAIVGRLVPEHDPVYKVTIIPRGKALGVTMFLPEEDRYSYTKQRLESQIASLFGGRIAEALIFGPEQVTTGASNDIQRATEIARNMITKWGLSERLGPLTYNQDNDEVFLGHQIAKNNKFSDDTAHLIDEESRAIIDRNYKLAKALLQENVNKLHMMAEALIKYETIDSAQIDDIMEGKPPREPKGWSDNGNKAKVVRSKTSETDTKIAPGPDAVDGAIS
SIO_010081: DMP02_RS01455
subclass of: SO_0000673
so part of: DMP02_RS01455
location: complement(311944..313860)
location: region:311944-313860:-1
so has part: feature:311944-313860:-1:exon

WP_269471419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311944-313860:-1:exon

DMP02_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rlmE
locus tag: DMP02_RS01460
old locus tag: RVIR1_02950
so part of: sequence
location: complement(314129..314770)
location: region:314129-314770:-1
so has part: feature:314129-314770:-1:exon
subclass of: SO_0000010

position:314129:-1
position: 314129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314770:-1
position: 314770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314129-314770:-1:exon

DMP02_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rlmE
locus tag: DMP02_RS01460
old locus tag: RVIR1_02950
EC number: 2.1.1.166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013101973.1
GO function: GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO process: GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
translation: MARSKSSQRWLKQHFSDPYVKRAHQEGLRSRSAYKLLEIQEKDKLIKPGMVVIDLGAAPGGWSQLAAKLVGEKGKVYALDILSMSPLAAVDFIQGDFRDENVLQQLLDHLQSIPVDLVISDMAPNLSGMRTVDQPRAMYLAELALDFAQRVLKPKGGFIIKAFQGEGFEAYLRLVRQLFKTVSIRKPAASRGASAEVYLVATGYHLQNNGLNS
SIO_010081: DMP02_RS01460
subclass of: SO_0000673
so part of: DMP02_RS01460
location: complement(314129..314770)
location: region:314129-314770:-1
so has part: feature:314129-314770:-1:exon

WP_126322332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314129-314770:-1:exon

DMP02_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01465
old locus tag: RVIR1_02960
so part of: sequence
location: complement(314760..316052)
location: region:314760-316052:-1
so has part: feature:314760-316052:-1:exon
subclass of: SO_0000010

position:314760:-1
position: 314760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316052:-1
position: 316052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314760-316052:-1:exon

DMP02_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01465
old locus tag: RVIR1_02960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035926.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTKPLATQKPTLLAAIICLLASSFYMYEFILQISPGVMTRELIHDLGLNAVSLGTMAAFYYYAYTPMQLPAGFLFDRFGPRRLIAAATFTCAVGALIFGTTHSIAMASAGRFMMGMGSAFSFIGTLVLVSRWFPARYFAFLTGLVELMSCVGAIVGETPLAIAVGHWGWRHTTITLSMIGMVLAALIWLIVRDSPEVVSKGKRFQSTSDKTFIQSLRQVGRNNQTWFIALYSFMVWAPITAFAALWGVPFLVAAYGISTQAASAACTMIWLAIGIGCPILGWWSDKVGLRGMPLKFAASLGIIGLIPIIYIPHLPLFWLYFCLFLFGLAASGQSLAFGVVKDNNHANVAGTAIGINNMATVAGGALFQPIIGLFLHLYWNGATHNGMPFYNAADYRKAFIVLPLCYFFAFLIGKFLILETHCQPQHNDGP
SIO_010081: DMP02_RS01465
subclass of: SO_0000673
so part of: DMP02_RS01465
location: complement(314760..316052)
location: region:314760-316052:-1
so has part: feature:314760-316052:-1:exon

WP_126322333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314760-316052:-1:exon

DMP02_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01470
old locus tag: RVIR1_02970
so part of: sequence
location: complement(316110..317447)
location: region:316110-317447:-1
so has part: feature:316110-317447:-1:exon
subclass of: SO_0000010

position:316110:-1
position: 316110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317447:-1
position: 317447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316110-317447:-1:exon

DMP02_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01470
old locus tag: RVIR1_02970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035335.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MYNNDAVLTDSVPYTLTRKKQLLLASIICTLAAMFYMYEFILQVSPAVMTSELMSDLNLNAASLGTMAAFYYYSYTPMQLPAGLLYDRFGPRRLITLAVLICAIGALLFGSTHSVFTASIGRFFMGIGSAFSFIGALLLVSRWFPPHYFALLTGLVQLMSSVGAIAGQVPLASAINHWGWRSTIITLSLIGAFLALLIWTIVRDSPETVSQRQKFQRCPKTNELNRLKQVCNNRQTWFIALYSFAIWAPITAFAALWGIPFLVANYGITTEAASKASAMIWLGIGIGSPLFGWVSDKIQSRSIPLSLSALLGIISLSIVIYGPHLPIVWLYTALFIFGLGASGQTLSFGVVKDNNPPSVVGTAIGLNNMAVVAGGALFQPLIGILLYYNWSGAIQDGRPFYGAADYQKALIILPLCYILALVVSRFLLRETHCKQQFPNETAAAL
SIO_010081: DMP02_RS01470
subclass of: SO_0000673
so part of: DMP02_RS01470
location: complement(316110..317447)
location: region:316110-317447:-1
so has part: feature:316110-317447:-1:exon

WP_126322334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316110-317447:-1:exon

DMP02_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01475
old locus tag: RVIR1_02980
so part of: sequence
location: 317744..317829
location: region:317744-317829:1
so has part: feature:317744-317829:1:exon
subclass of: SO_0000663

position:317744:1
position: 317744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317829:1
position: 317829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317744-317829:1:exon

DMP02_RS01475
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01475
old locus tag: RVIR1_02980
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:317777..317779,aa:Leu,seq:caa)
SIO_010081: DMP02_RS01475
subclass of: SO_0000673
so part of: DMP02_RS01475
location: 317744..317829
location: region:317744-317829:1
so has part: feature:317744-317829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317744-317829:1:exon

DMP02_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ispF
locus tag: DMP02_RS01480
old locus tag: RVIR1_02990
so part of: sequence
location: complement(317833..318333)
location: region:317833-318333:-1
so has part: feature:317833-318333:-1:exon
subclass of: SO_0000010

position:317833:-1
position: 317833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318333:-1
position: 318333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317833-318333:-1:exon

DMP02_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ispF
locus tag: DMP02_RS01480
old locus tag: RVIR1_02990
EC number: 4.6.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035731.1
GO function: GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
translation: MTNDSNLRIGYGVDVHAFASGDHIILGGITIPYHAGLRAHSDGDVVIHALVDALLGASALGDIGQHFPDTENRWKDCSSRIFLKESVRMLQESRFSIANVDITVLAEAPKLSPYREAIRANLASDMAITLNQVNIKATTTEKLGFIGRKEGIAATAIVLIQKQASN
SIO_010081: DMP02_RS01480
subclass of: SO_0000673
so part of: DMP02_RS01480
location: complement(317833..318333)
location: region:317833-318333:-1
so has part: feature:317833-318333:-1:exon

WP_126322335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317833-318333:-1:exon

DMP02_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01485
old locus tag: RVIR1_03000
so part of: sequence
location: 318538..319116
location: region:318538-319116:1
so has part: feature:318538-319116:1:exon
subclass of: SO_0000010

position:318538:1
position: 318538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319116:1
position: 319116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318538-319116:1:exon

DMP02_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01485
old locus tag: RVIR1_03000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqgE/AlgH family protein
translation: MIETSHFLTNHFLVAMPSLTDPYFNRSVVYICEHNEKGAVGIIVNQPLQSFRVNLSEILQAIVGSKSELPSTTDFPILCGGPIHPERGFVIHAPGGEWQSSLKMNSKICVTTSKDILQAIAKQQGPEKFIFSLGYANWVAGQIEQEIINNFWLTVPADPAILFDVPFNKRWLKAINSLGIEIDKLVYSGGHA
SIO_010081: DMP02_RS01485
subclass of: SO_0000673
so part of: DMP02_RS01485
location: 318538..319116
location: region:318538-319116:1
so has part: feature:318538-319116:1:exon

WP_126322336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318538-319116:1:exon

DMP02_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ruvX
locus tag: DMP02_RS01490
old locus tag: RVIR1_03010
so part of: sequence
location: 319113..319535
location: region:319113-319535:1
so has part: feature:319113-319535:1:exon
subclass of: SO_0000010

position:319113:1
position: 319113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319535:1
position: 319535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319113-319535:1:exon

DMP02_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ruvX
locus tag: DMP02_RS01490
old locus tag: RVIR1_03010
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598360.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction resolvase RuvX
translation: MIKTVLGFDFGTKYIGVAVGYTSPLMAQPLTSLIAQKGEPPWKEIDTLIKTWSPDALIVGMPLNMDGSEQPMTQSAGLFSENLKQRFHLPIFAVDERLTTIEARARLFSSGGYKALQKKAIDSVSAQLIVEMWLESTRYE
SIO_010081: DMP02_RS01490
subclass of: SO_0000673
so part of: DMP02_RS01490
location: 319113..319535
location: region:319113-319535:1
so has part: feature:319113-319535:1:exon

WP_126322337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319113-319535:1:exon

DMP02_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: murJ
locus tag: DMP02_RS01495
old locus tag: RVIR1_03020
so part of: sequence
location: 319528..321060
location: region:319528-321060:1
so has part: feature:319528-321060:1:exon
subclass of: SO_0000010

position:319528:1
position: 319528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321060:1
position: 321060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319528-321060:1:exon

DMP02_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: murJ
locus tag: DMP02_RS01495
old locus tag: RVIR1_03020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035010.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MSKALFKSTSVVASMTLLSRILGFVRDIIAARMFGATAAVDAFYIAFKIPNFMRGLFAEGSFSTAFIPTLAEYKQTKSQKEVETFIAHITGVLGFILLVVSIAGILGSKGLVALFAPGLDPYRFQLASEMLRVTFPYLMLISLTALVGAILNCYGLFWVPAFTPALLNVCLIATAFGITHYFKVPVEAQAWGVLLAGFLQLGFQLPFLKQLNLLRNPLFNWRDPGVQKVLKLMLPALFGSSIGQISLLLNTIFASFLVAGSVTWLYYSDRLAYFPLGVFGVALLTVILPHLSRQHAAKTPEAFSSTLNWGLRCNLIIGIPASVTMLILSGPLIISLFHYGKFTDHDVFMTQRSVIAYSVGLQAFMLIKVLAAAFYAQQNIRTPVRIGIAALVVNMLLNILLIMPLKHAGLALASSLSAWLNAGLLLQGLRTRGMFQWQSGWLIFMLRLLFANCVLALFLYWTAAALPVWLSWHWQQRFLHILLLGVISIIIYISCLWISGLRFRDLKAMP
SIO_010081: DMP02_RS01495
subclass of: SO_0000673
so part of: DMP02_RS01495
location: 319528..321060
location: region:319528-321060:1
so has part: feature:319528-321060:1:exon

WP_126322338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319528-321060:1:exon

DMP02_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ribF
locus tag: DMP02_RS01500
old locus tag: RVIR1_03030
so part of: sequence
location: 321057..322118
location: region:321057-322118:1
so has part: feature:321057-322118:1:exon
subclass of: SO_0000010

position:321057:1
position: 321057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322118:1
position: 322118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321057-322118:1:exon

DMP02_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ribF
locus tag: DMP02_RS01500
old locus tag: RVIR1_03030
EC number: 2.7.1.26
EC number: 2.7.7.2
inference: COORDINATES: protein motif:HMM:NF004163.0
GO function: GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional riboflavin kinase/FAD synthetase
translation: MTELIFGLHHLKAKHLARVDSQQLDFRQGAAKMSNRSVCRIHEDCELSGNAAENSSAKSILTIGNFDGVHQGHKVIIRALQQQAKLLHLPSCVMLFEPHPQEFFLQEKASARLMRLREKIKILKDLSVDRIVCLRFNKHLAGMSAETFVKEILVAKLGVRSLIVGDDFRFGKGRQGDFASLKKLGRQYGFEVHATPTVLFEGERIGSSRVRNALKEGDFSLAKQLLTRPFTLSGRVIQGDQRGRLLGFATANIALHRLVLPVSGVFMVRVHGLGEKPFNAVANCGRRPTVNGLKDLLEIHLLDFNTDIYGVCLEIEFLKKIREEKKFSSLEELKQQIEADVKWAKEVFKALYG
SIO_010081: DMP02_RS01500
subclass of: SO_0000673
so part of: DMP02_RS01500
location: 321057..322118
location: region:321057-322118:1
so has part: feature:321057-322118:1:exon

WP_232019587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321057-322118:1:exon

DMP02_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01505
old locus tag: RVIR1_03040
so part of: sequence
location: 322217..323065
location: region:322217-323065:1
so has part: feature:322217-323065:1:exon
subclass of: SO_0000010

position:322217:1
position: 322217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323065:1
position: 323065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322217-323065:1:exon

DMP02_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01505
old locus tag: RVIR1_03040
inference: COORDINATES: protein motif:HMM:NF024895.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKKYLVAGWFISSLLSPLFAQAQCCCVAKKPSPKMYVDLGIGQALTYHVKPAFSGAAVDFLGLNNVALRPRNSGGLPQSFSVGAGWLWPQVYRLESPYFPFVSIGLSYQHTNLFNTKKSVVYWFEEALPDGEKAAQPFAVAPYTFSQDSVMANLKLDLYRWRYVMPYLSLGLGAAWNQVKDKAVFTAVDGEQVRGQITDANSRNTAFSYSAGLGLDFPVTEKFWLSLGYAYSGLGRMGGINSLTNSVDPNPTNPLDIILNHVSSFGQVSTQTILLMGRYVFA
SIO_010081: DMP02_RS01505
subclass of: SO_0000673
so part of: DMP02_RS01505
location: 322217..323065
location: region:322217-323065:1
so has part: feature:322217-323065:1:exon

WP_126322339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322217-323065:1:exon

DMP02_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01510
old locus tag: RVIR1_03050
so part of: sequence
location: 323317..325344
location: region:323317-325344:1
so has part: feature:323317-325344:1:exon
subclass of: SO_0000010

position:323317:1
position: 323317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325344:1
position: 325344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323317-325344:1:exon

DMP02_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01510
old locus tag: RVIR1_03050
inference: COORDINATES: protein motif:HMM:NF012863.2
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SGNH/GDSL hydrolase family protein
translation: MAEIFRDLAAKASAPLFPQRRVASTYAAAAPLPQEKTEVNGTINVIGDSLSDAGKKHGKYKQKIFRWIPYRWFLHQSPEDQFTNGRVWTYPLQLRMQHQLKEISTRNPLYNVNGSFLNFNAEGKNMAEGGSTAYNYRRFINFFRRIKGFILSFFLNNIEKQSYDIKKEDQGIKPDDLNLVFAGANDFVTVGYCNEGGVSRAIKGIQTSIDLLTTTQKKTGSSNYTKNVVVFTLPDFSKTPRFQGKTEKERAQAQNMCLKFNEELKDLAQSYRYIDFRFGDIYQIKSKDKIDAILAKIKRQGIIVLGKGSHRTVYFVEKGKFVLQPSKAEPVTVKVKLAKDQQKMLGLKQGKVERNSDNTVFLDEWICQLASHAKLDTDVKVFDTAAVFNEVNENPEMYGFTSGCAIYYGFNKCEEPIKGNAVVLTKTKDNNMEVLFFQQGELVRDKKGKVRKVILNLSTELQKQLDLSVGNQAGDMRKVVGLEQKHSVWHTRIIQAAIRGYEGHFGEKIKLADIYTSILLQIKKSLPNQSRIFWDDLHPTATMHFLLELVFSEFFNNHYQLQFPRQWLDDTAILQRKEDTVELPFKSHEAPESFTFGVNNKKAKLAIFSQPNVVAASAVVKKNDNGKTRLLSADKGYYRASCLKPYSRYHLLKAATPPRIEDRVVDELKKVHFSC
SIO_010081: DMP02_RS01510
subclass of: SO_0000673
so part of: DMP02_RS01510
location: 323317..325344
location: region:323317-325344:1
so has part: feature:323317-325344:1:exon

WP_126322340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323317-325344:1:exon

DMP02_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01515
old locus tag: RVIR1_03060
so part of: sequence
location: 325387..326130
location: region:325387-326130:1
so has part: feature:325387-326130:1:exon
subclass of: SO_0000010

position:325387:1
position: 325387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326130:1
position: 326130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325387-326130:1:exon

DMP02_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01515
old locus tag: RVIR1_03060
EC number: 1.18.1.2
inference: COORDINATES: protein motif:HMM:NF012402.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin--NADP reductase
translation: MTKKEFILILQDSRQIAPAVKHFTFHREDGEACSFIPGQFITLHIPTPEKVLRRSYSIANSTHEASDKIEFAASYVPEGTASDLLFTMQVGDKVTATGPFGRLVLRDEQPNRYIFVATGTGITPYRTMLSELAHRFKQHPCFKVVLLFGVRKPEDLLYRDEFTRFAQKNPWFEFRAYYSRIKLEQRLPYEYEGRVLNAFNEIEPNPKQDIVYLCGNPNMVDEVFSLLINTHSFPSEMVRREKYISSN
SIO_010081: DMP02_RS01515
subclass of: SO_0000673
so part of: DMP02_RS01515
location: 325387..326130
location: region:325387-326130:1
so has part: feature:325387-326130:1:exon

WP_126322341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325387-326130:1:exon

DMP02_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ribH
locus tag: DMP02_RS01520
old locus tag: RVIR1_03070
so part of: sequence
location: complement(326166..326654)
location: region:326166-326654:-1
so has part: feature:326166-326654:-1:exon
subclass of: SO_0000010

position:326166:-1
position: 326166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326654:-1
position: 326654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326166-326654:-1:exon

DMP02_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ribH
locus tag: DMP02_RS01520
old locus tag: RVIR1_03070
EC number: 2.5.1.78
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598368.1
GO component: GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6,7-dimethyl-8-ribityllumazine synthase
translation: MKKIQEITAKPLHFSHPEQEFKLAIVVSRFNEEITDALLESALARLKALNFPEEQITVVRVPGAIEIGLAAQQFALSDSNYLAIICLGAVIRGETSHYDYVCQQVSYACQKVALEENIPVIFGVLTTDDEAQALARINKGAEAVDAAMEMISLLDQIEEIAV
SIO_010081: DMP02_RS01520
subclass of: SO_0000673
so part of: DMP02_RS01520
location: complement(326166..326654)
location: region:326166-326654:-1
so has part: feature:326166-326654:-1:exon

WP_126322342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326166-326654:-1:exon

DMP02_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ribB
locus tag: DMP02_RS01525
old locus tag: RVIR1_03080
so part of: sequence
location: complement(326675..327886)
location: region:326675-327886:-1
so has part: feature:326675-327886:-1:exon
subclass of: SO_0000010

position:326675:-1
position: 326675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327886:-1
position: 327886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326675-327886:-1:exon

DMP02_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ribB
locus tag: DMP02_RS01525
old locus tag: RVIR1_03080
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011946292.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNTSSFSTIHRALDDLRQGKMVILFDHENRENEGDLILAADQVTPEAINFMAQHARGLICLALQEADIQRLQLPMMVEHSTNPFNTAFTASIEAAEGVTTGISAADRAHTIKVAVNPQSTAKNIVMPGHIFPLRARKGGVLERMGQTEGGTDLMRLAGLTPAAVICEIMNPDGSMARFPDLQKFAEQHQLTLLSIRELIDYRLQTESLVKEIASIGLPTEDYGDLTIKLFESCLDQHHHLALIKDNPKQTDQSTLVRIHSECFTGDIFGSARCDCGWQLHESLRQISQQGGTLLYLRQEGRGIGLLNKLKAYALQDQGFDTVEANQKLGFGSDERDYWIGAQILRQLKQLTVKLLTNNPQKIADLKQQGITVIERIPLIAQPNKTNQAYLKTKQSKLGHLLNL
SIO_010081: DMP02_RS01525
subclass of: SO_0000673
so part of: DMP02_RS01525
location: complement(326675..327886)
location: region:326675-327886:-1
so has part: feature:326675-327886:-1:exon

WP_126322343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326675-327886:-1:exon

DMP02_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ribD
locus tag: DMP02_RS01530
old locus tag: RVIR1_03090
so part of: sequence
location: complement(327931..329061)
location: region:327931-329061:-1
so has part: feature:327931-329061:-1:exon
subclass of: SO_0000010

position:327931:-1
position: 327931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329061:-1
position: 329061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327931-329061:-1:exon

DMP02_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ribD
locus tag: DMP02_RS01530
old locus tag: RVIR1_03090
EC number: 1.1.1.193
EC number: 3.5.4.26
inference: COORDINATES: protein motif:HMM:TIGR00326.1
GO function: GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
translation: MRIHEDCEPSGNAAENSSAKSIDTTYLKQALELAQLRRGFCAPNPCVGAVLVKDEKVIASGFHSASGTAHAEVNALNKIEACTAKGATLYVTLQPCCHTTKKTPPCTQLLIAKKIAKVVYAFRDPNPAVSDHSDQQLQQAGIVCIQQSLPEIDDFYASYQFWWKHKQPFVTAKLAISLDGKVAGQHGQRIQLTGEAAQRFTHQQRQRADAILSTAKTISNDNPLLNVRINNTTASKPLYILDSELNTPLSAHVFNTAKKITLFHKIDLSSKKLAEYHRDNVQLVAIKTNQTGLNLDDVLKHIGQEGRHDLWIEAGGHCFQSFAQNQLLQRAFLYVAPRWLGQDAQNAFTDPLVLSKAKLSSPILLGPDSCFIFNWP
SIO_010081: DMP02_RS01530
subclass of: SO_0000673
so part of: DMP02_RS01530
location: complement(327931..329061)
location: region:327931-329061:-1
so has part: feature:327931-329061:-1:exon

WP_126322344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327931-329061:-1:exon

DMP02_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mpl
locus tag: DMP02_RS01535
old locus tag: RVIR1_03100
so part of: sequence
location: complement(329124..330473)
location: region:329124-330473:-1
so has part: feature:329124-330473:-1:exon
subclass of: SO_0000010

position:329124:-1
position: 329124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330473:-1
position: 330473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329124-330473:-1:exon

DMP02_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mpl
locus tag: DMP02_RS01535
old locus tag: RVIR1_03100
EC number: 6.3.2.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034814.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
translation: MRLHILGICGTFMAGVALLAKEKGFTVTGSDTNVYPPMSTHLQEQGISIFEGYEDLNQFSPLPDIVIMGNSMKRGNPCVEYVLNKGTPYISGPQWLAENVLQGRHVLAVAGTHGKTTVTSLLSWIADSAGLNPGFLIGGIAKNFKTSARLGSHPFFIIEADEYDTAFFDKRSKFIHYHPRTLILNNLEFDHADIFPDLNAIKLQFSYLLRTVPSEGLIISPKEDKNLQTVLSQACWTPIVYTGTSSSWHAKLIKPDASQFSVTFNHKEQGEVTWNLLGKHNVANALNAIAAANHIGIKPQQAIEALNQFQGIKRRLEIYKQVNEITLYDDFAHHPTAIASTLAGLRQRVGKARILVVLQCGTHTMLSGVHSKTLGPSFKEADKVWLIKPDQDWCVEQNAAIPMQICDSIATVVESVAKEAKPHDHIVIMSNRGSNTLHEKLVNALFHHE
SIO_010081: DMP02_RS01535
subclass of: SO_0000673
so part of: DMP02_RS01535
location: complement(329124..330473)
location: region:329124-330473:-1
so has part: feature:329124-330473:-1:exon

WP_126322345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329124-330473:-1:exon

DMP02_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01540
old locus tag: RVIR1_03110
so part of: sequence
location: 330587..331852
location: region:330587-331852:1
so has part: feature:330587-331852:1:exon
subclass of: SO_0000010

position:330587:1
position: 330587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331852:1
position: 331852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330587-331852:1:exon

DMP02_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01540
old locus tag: RVIR1_03110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012220581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MSKKNAFYAQSGGVTAVINATACGLIETARQHKSKIGKVYAGCNGIIGALTEDLIDTSKESSKAIAGLRYTPGGAFGSCRYKLKGLEENRAEYERLLAVFVAHNIGYFFYNGGGDSQDTAYKISLLSKERAYPLTCIGIPKTVDNDLPFTDNSPGFGSVAKYIAISTREAGLDVASMCATSTKVFIMEVMGRHTGWIAAASGLAAENQGEPPHIILFPEIVFNEAKFLDRVNKTVKRYGYCVIVLAEGVRDANNEFLVESKSTDAFGHKQLGGAAPTIAELIKSKLGFKYHWALPDYLQRSARHIASAVDVKQAYALGKAAIEFAIKGKNGVMPIIIRKSGKRYQWTIGEAKLVDVANQEKKMPRNFISADGFHITPRCREYLLPLIQGEDYPAYKHGLPDYMPLKNQKIAKKLKKYSVKE
SIO_010081: DMP02_RS01540
subclass of: SO_0000673
so part of: DMP02_RS01540
location: 330587..331852
location: region:330587-331852:1
so has part: feature:330587-331852:1:exon

WP_126322346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330587-331852:1:exon

DMP02_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01545
old locus tag: RVIR1_03120
so part of: sequence
location: 331987..332658
location: region:331987-332658:1
so has part: feature:331987-332658:1:exon
subclass of: SO_0000010

position:331987:1
position: 331987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332658:1
position: 332658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331987-332658:1:exon

DMP02_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01545
old locus tag: RVIR1_03120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S24 family peptidase
translation: MNVKDIRRKNLRRLARSVGGITDLSERLDRSQSQISHLIGNSPIKNIGDRLASHIESVFNKPHGWLDHEHSVEEEEGLYSGSKNNQPSYQVPLLSAQEAKDRFVQLPKLPLKAYSNYISTNIPLSSDAFAIRVENDCMETAQGPSFPKNCIIVLDTNCVPHSGAFVLARLKQGTGATLLFRQLVVDGNQRYLKALNLHYPLTDMQADDAICGVVRFMLMEFNK
SIO_010081: DMP02_RS01545
subclass of: SO_0000673
so part of: DMP02_RS01545
location: 331987..332658
location: region:331987-332658:1
so has part: feature:331987-332658:1:exon

WP_126322347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331987-332658:1:exon

DMP02_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01555
old locus tag: RVIR1_03140
so part of: sequence
location: 333525..335171
location: region:333525-335171:1
so has part: feature:333525-335171:1:exon
subclass of: SO_0000010

position:333525:1
position: 333525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335171:1
position: 335171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333525-335171:1:exon

DMP02_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01555
old locus tag: RVIR1_03140
inference: COORDINATES: protein motif:HMM:NF012652.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MENLASHHFFEYLIAEGIVTNEQLSFVLEEARHQQVSFISCLMNDKTIDPSRLFSGLSHVFCLSTVDLDSVDPLQLPGDVIEERLLQKYQVLPLWQEKEKLGLAIADPTQQLAIDDISFHTGLIIEKILVEPEKLKQLLAKITKKPDFPQKITDEPDKNADSEIAVIQTVSQLLQSAIERGASDIHVEPYQDHLQIRFRIDGLLYLAAKFPVTLIQRIITRFKIMSQLDIAERRIPQDGRFQVAEANHRNIDCRISTCPTLYGEKLVIRILDSNKMLLAVDKLGMTIKQKNCFLQALQCPHGMVLVTGPTGSGKTITLYTALNILNTSQLNISSVENPIEIVLPGINQVNTNPKIGLDFAKVLRAFLRQDPDIMMVGEMRDQETAEIGIKAAQTGHLVLSSLHTNSAVESLVRLLNMGIPAYNVASSLNLIIAQRLARRLCARCKIKDNLPENVLLALGLSHAEIKSNLLFAAQGCSECTDGYRGRTGIFEMLLITDEIKSLILNNCDAQEIAQHAQIKGMQTLYASALEKLKQGEISLLEMKRIIKD
SIO_010081: DMP02_RS01555
subclass of: SO_0000673
so part of: DMP02_RS01555
location: 333525..335171
location: region:333525-335171:1
so has part: feature:333525-335171:1:exon

WP_126322348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333525-335171:1:exon

DMP02_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01560
old locus tag: RVIR1_03150
so part of: sequence
location: 335186..336388
location: region:335186-336388:1
so has part: feature:335186-336388:1:exon
subclass of: SO_0000010

position:335186:1
position: 335186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336388:1
position: 336388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335186-336388:1:exon

DMP02_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01560
old locus tag: RVIR1_03150
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MFNITKIYVWDGLTQSGKACKGKTLVSDTQLLRIKLRQEGIILKASKCRYNVVISKGIKAKELFIFTRQVARLLQAGLPLVQIFELLENNTNNLLLKEFINQLSLYIKNGYSLTEALQKNRPYFSEFHCSLIALGERTSHLELMLSRIAEHMQKNLKIKAALINVLIYPCMVIGVASFVFLALLIGVVPQFEQIFTEVGAQLPFLTRMVIYLSQFIGSIAVVTALFFLIVTVLFIFFQKNYLIVAIKRDQFLVKIPVVKKILSEVITARLSRALATALLSGLPLLDALQAIAGMTKNYVYKNAILSSCKLIQNGESFYQALFRQNILAPEVLQLIKLGEVSASLAEILNNVADMYEEKIDYFVSNLSKLAEPLLIIILGIMIGGLMIAMYLPIFKLGSVI
SIO_010081: DMP02_RS01560
subclass of: SO_0000673
so part of: DMP02_RS01560
location: 335186..336388
location: region:335186-336388:1
so has part: feature:335186-336388:1:exon

WP_126322349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335186-336388:1:exon

DMP02_RS07310
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07310
so part of: sequence
location: 336752..337189
location: region:336752-337189:1
so has part: feature:336752-337189:1:exon
subclass of: SO_0000010

position:336752:1
position: 336752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337189:1
position: 337189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336752-337189:1:exon

DMP02_RS07310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07310
EC number: 3.4.23.-
inference: COORDINATES: protein motif:HMM:NF013632.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MFRALVLTWGLIALSGIDFEHGLLPDILVLPLLWLGLSLNVFHVFVPPGAAILGASVAYLSLWIVAKSYQYLTKREGMGQGDFKCFALLGAWLGIHALIKILLMASLLGSLVGFVLLMKQKNSNFQKAIPFGPFLAIAGWVALLV
SIO_010081: DMP02_RS07310
subclass of: SO_0000673
so part of: DMP02_RS07310
location: 336752..337189
location: region:336752-337189:1
so has part: feature:336752-337189:1:exon

WP_232019588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336752-337189:1:exon

DMP02_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01570
old locus tag: RVIR1_03170
so part of: sequence
location: complement(337283..337588)
location: region:337283-337588:-1
so has part: feature:337283-337588:-1:exon
subclass of: SO_0000010

position:337283:-1
position: 337283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337588:-1
position: 337588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337283-337588:-1:exon

DMP02_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01570
old locus tag: RVIR1_03170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator
translation: MKKSILKTVHESAKGLYDAGLLETETMRTFDRLCLTPVHELSPHQIKRLRLREKVSQPVFAAFLNITPSTIKKWETGEKHPKGTSLKLLNIVEKKGLGALA
SIO_010081: DMP02_RS01570
subclass of: SO_0000673
so part of: DMP02_RS01570
location: complement(337283..337588)
location: region:337283-337588:-1
so has part: feature:337283-337588:-1:exon

WP_126322351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337283-337588:-1:exon

DMP02_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01575
old locus tag: RVIR1_03180
so part of: sequence
location: complement(337585..337953)
location: region:337585-337953:-1
so has part: feature:337585-337953:-1:exon
subclass of: SO_0000010

position:337585:-1
position: 337585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337953:-1
position: 337953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337585-337953:-1:exon

DMP02_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01575
old locus tag: RVIR1_03180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MRIFKNKAFSRWVKEQKLTDLSLKKAIQEIGDGLYEANLGGSLFKKRIILGNRGKSSGARTIVAFKLNNSAFFIYGFAKNERSNITLREEHALKALAKVYFSYNEKQINRAIEMGELIEVLL
SIO_010081: DMP02_RS01575
subclass of: SO_0000673
so part of: DMP02_RS01575
location: complement(337585..337953)
location: region:337585-337953:-1
so has part: feature:337585-337953:-1:exon

WP_126322352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337585-337953:-1:exon

DMP02_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01580
old locus tag: RVIR1_03190
so part of: sequence
location: 338284..339276
location: region:338284-339276:1
so has part: feature:338284-339276:1:exon
subclass of: SO_0000010

position:338284:1
position: 338284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339276:1
position: 339276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338284-339276:1:exon

DMP02_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01580
old locus tag: RVIR1_03190
EC number: 1.1.1.94
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
translation: MLESVNSFSPIAVLGAGAWGTALALHLARNGQAVKLWAYEKEQVEQINTTRYNTRYLPDEELPSSIVCSHDYETVLADVRDVLIVVPSTAFRATLLAIKPLLKSNQRVLWATKGLDEDKHQLLHEVASEILGDVDMAVLSGPSFAKEVAMGLPTAVTIASNQQAFANDLQQRFRSDKFHVELTKDIIGVELGGAVKNILAIAVGMTEGLGFGANAKAALMTKGLSEMIALGSKLGAEQETFLGLSGLGDLILTCTDNQSRNRRLGLALGQGKSLQQVQKEIGTTEGTITAKNVFYLLEKYKVKLPICESVYRVLYEQKEPQFLFDTFFSQ
SIO_010081: DMP02_RS01580
subclass of: SO_0000673
so part of: DMP02_RS01580
location: 338284..339276
location: region:338284-339276:1
so has part: feature:338284-339276:1:exon

WP_126322353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338284-339276:1:exon

DMP02_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01585
old locus tag: RVIR1_03200
so part of: sequence
location: complement(339335..341269)
location: region:339335-341269:-1
so has part: feature:339335-341269:-1:exon
subclass of: SO_0000010

position:339335:-1
position: 339335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341269:-1
position: 341269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339335-341269:-1:exon

DMP02_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01585
old locus tag: RVIR1_03200
EC number: 4.2.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aconitate hydratase
translation: MAQNVTQKLISAHKVEGEMIPGNEIGLKIDQTLCQDATGTMVMLECEAMQLDRTKAEVSVQYIDHNLLQTDFKNADDHLFLLSACKKFGLHYSGPGNGVSHPVHMERFGKPGKTLLGSDSHTCAAGSMGMLAIGAGGLEVAMAIAGQPFHVTMPKVWGVKLTGELPAWVSAKDIILEFLRRHDVDGGIGKIIEYYGPGLQYLSAMDRHVIANMGAELGATTSVFPSDEITREFLQAQQREDDWQEIIADSNASYDEHEEINLSKLVPMIALPSSPGKVVPVKDVAGRPIYQAMIGSSANPGLRDFAIAAEIIAGKQVFPGVSLDINPTSRQILENMVKLGILEKLIHAGGRIHQAGCNGCIGMGQAPATGKISLRTVPRNFPGRSGTKEDQVYLCSPETAAASALTGVITDPSTLGRKAIIRFKEPAQIILNTHMLLAPKDINASTKLVKGPNIQPLPEFSVLPQTIEGPVLIKLGDDISTDTILPAGAKILPFRSNIPGISQFVFDQIDPDYPKRALKYQKTGSIIVGGDNYGQGSSREHAAIAPRYLGVQAVMTKSFARIHRQNLINFGILPLVFENPADYDDIEQNDILELANVQQTIQKTQAVKVNNKTKNKIYTLRHSLSPRELEVLLTGGLINWVKQK
SIO_010081: DMP02_RS01585
subclass of: SO_0000673
so part of: DMP02_RS01585
location: complement(339335..341269)
location: region:339335-341269:-1
so has part: feature:339335-341269:-1:exon

WP_126322354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339335-341269:-1:exon

DMP02_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01590
old locus tag: RVIR1_03210
so part of: sequence
location: 341533..342051
location: region:341533-342051:1
so has part: feature:341533-342051:1:exon
subclass of: SO_0000010

position:341533:1
position: 341533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342051:1
position: 342051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341533-342051:1:exon

DMP02_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01590
old locus tag: RVIR1_03210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035910.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MNLPVTRWTDLIVFFICVLFLGVASYLQYRVGLIPCPLCIIQRFLITLLGLLFLMGALFNFSAITRCCLHTLTFLLSVLGAVVASRQLWLEHFPSDQLSSCQAALAQYSSSFYFQKIIDLFFQGSSNCGSGSWRFLNLSMPMWTLLFFVFLAAVSLRQVYINRRTHKQKLFF
SIO_010081: DMP02_RS01590
subclass of: SO_0000673
so part of: DMP02_RS01590
location: 341533..342051
location: region:341533-342051:1
so has part: feature:341533-342051:1:exon

WP_126322355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341533-342051:1:exon

DMP02_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01595
so part of: sequence
location: 342116..342424
location: region:342116-342424:1
so has part: feature:342116-342424:1:exon
subclass of: SO_0000010

position:342116:1
position: 342116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342424:1
position: 342424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342116-342424:1:exon

DMP02_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIRTLLIILLLIIPSIASAASGHLIGGIRRALPPEYLRVPQWQKCAGSIPCGSAQFVCLPKLKPAFCPYLSWRLLKSKHLIPDCTEGCQGLGSVKTTKPCK
SIO_010081: DMP02_RS01595
subclass of: SO_0000673
so part of: DMP02_RS01595
location: 342116..342424
location: region:342116-342424:1
so has part: feature:342116-342424:1:exon

WP_126322356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342116-342424:1:exon

DMP02_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01600
old locus tag: RVIR1_03220
so part of: sequence
location: complement(342566..343159)
location: region:342566-343159:-1
so has part: feature:342566-343159:-1:exon
subclass of: SO_0000010

position:342566:-1
position: 342566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343159:-1
position: 343159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342566-343159:-1:exon

DMP02_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01600
old locus tag: RVIR1_03220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YggT family protein
translation: MLNPFNHAGLFLIQSLFDLYIFILLLRVVLQWVHTDPRNPLFVLIAKLTNPPLKPICRIIPRLYGVDLAAIVLLLGLEAIKIAFLVWLQVNTTPHLGGLLIIAFAELLNQLINIFFYSILALAILSWISPLAQGPLIEILVRISEPLIRPIRGILPNFSGFDFSPLVLIIGLKLLTILLVQPLAQIGASLALGSLGN
SIO_010081: DMP02_RS01600
subclass of: SO_0000673
so part of: DMP02_RS01600
location: complement(342566..343159)
location: region:342566-343159:-1
so has part: feature:342566-343159:-1:exon

WP_126322357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342566-343159:-1:exon

DMP02_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01605
old locus tag: RVIR1_03230
so part of: sequence
location: complement(343143..344078)
location: region:343143-344078:-1
so has part: feature:343143-344078:-1:exon
subclass of: SO_0000010

position:343143:-1
position: 343143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344078:-1
position: 344078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343143-344078:-1:exon

DMP02_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01605
old locus tag: RVIR1_03230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LD-carboxypeptidase
translation: MQSLAYKLLTPGATVDIIAPAGGCAPESLIQIKTLLKNWQLTPRISPELLGEDLLCANTDENRFKQLQEALFNAESSAVWCVRGGYGCTRLIPELLKLKAPKANKLFIGFSDITTLHLFLQQQWHWQTLHGPSANQVAHDRIDATSIQEFKKLIFGELNQLAFSLVPLNTKHAIPIKAPITGGTLTLIQTSLGTPWQIDTKNKILFLEEVNESAYRVDRMLQHLQHSGILQNVKAILFGDFIAPQENKDSTLIQSVLARFANEQPVPVLHIPGIGHGKTNRSLPLGANTELNLDKKQLIITIRLNNHAKPL
SIO_010081: DMP02_RS01605
subclass of: SO_0000673
so part of: DMP02_RS01605
location: complement(343143..344078)
location: region:343143-344078:-1
so has part: feature:343143-344078:-1:exon

WP_126322358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343143-344078:-1:exon

DMP02_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01610
old locus tag: RVIR1_03240
so part of: sequence
location: complement(344090..344881)
location: region:344090-344881:-1
so has part: feature:344090-344881:-1:exon
subclass of: SO_0000010

position:344090:-1
position: 344090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344881:-1
position: 344881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344090-344881:-1:exon

DMP02_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01610
old locus tag: RVIR1_03240
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MNLELKNKVILIAGASQGIGYATALAFAREGARVVICARDKETIEKAAKKIHDETKAEISATAVDLTQAETIQNWVESVLKQFKTIHVCITNIGGPPKGAFVDLDDKKWQEAFELTLMSAVRLSRAVIPSMKEQKWGRIIHLCSSSVRNPIANLGLSNSIRSAVVALSKTQADELAKDNILVNSILTGWTRTEQTNHILETMAKNAKLSTEEVIAKRESVIPLGRMGKPEEIAAPIVFLSSAGANFITGSTITVDGGESRFPF
SIO_010081: DMP02_RS01610
subclass of: SO_0000673
so part of: DMP02_RS01610
location: complement(344090..344881)
location: region:344090-344881:-1
so has part: feature:344090-344881:-1:exon

WP_126322359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344090-344881:-1:exon

DMP02_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gyrB
locus tag: DMP02_RS01615
old locus tag: RVIR1_03250
so part of: sequence
location: complement(344902..347322)
location: region:344902-347322:-1
so has part: feature:344902-347322:-1:exon
subclass of: SO_0000010

position:344902:-1
position: 344902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347322:-1
position: 347322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344902-347322:-1:exon

DMP02_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gyrB
locus tag: DMP02_RS01615
old locus tag: RVIR1_03250
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018576721.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MPKPNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDESLAGYCTQIDVTLHSDDSVTVKDNGRGIPVDIHSEEGRSAAEVIMTVLHAGGKFDSNSYKVSGGLHGVGVSVVNALSEKLKLTIRRNNKVYEQTYLLGEPTAPLAITGETQERGTEIRFYPSKAIFQHNNEFHYDILLKRLRELSFLNSGVAININDERNNEGIELKYVGGIKAFVEYLNQNKTLVHKQPFYFSAERDDITVEVALQWNDSFQENILCFTNNISQRDGGTHLAGFRSALTRTLNTYIDREATSKKLKITTSGDDTREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKGVVETLMSEKLEEFLLETPQDAKAIVAKIIDAARAREAARKAREMTRRKTALDIADLPGKLADCQETDPALCELFIVEGDSAGGSAKQGRNRRYQAILPLKGKILNVEKARFDKMLSSEEVGTLITALGCGIGKDDYNPDKLRYHRIIIMTDADVDGSHIRTLLLTLFYRQMPELLQRGNIYIAQPPLYKIKKGKQEQYLKDDAALQNYLIQTALHDAALYPHADGLPIQSMGLEKLVTDYRKAQTVVQHLSRRYPSDALQRLLDLPALSTEQLKDSQLVSDWAKQWETRLQQTTNNEAVQYQITVYENTERHVFLPCITSSSHGVATNYKFSYEFFESSEYQCLLTMASQLNGLIGSGAYVQRGEKKQSVSHFKEVYEWLLTEARRGQGIQRYKGLGEMNPSQLWETTMDPNTRRLLRVAIEDAITADQIFTTLMGDQVEPRRDFIQQNAIDANNLDI
SIO_010081: DMP02_RS01615
subclass of: SO_0000673
so part of: DMP02_RS01615
location: complement(344902..347322)
location: region:344902-347322:-1
so has part: feature:344902-347322:-1:exon

WP_126322360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344902-347322:-1:exon

DMP02_RS07190
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07190
old locus tag: RVIR1_03260
so part of: sequence
location: complement(347309..347461)
location: region:347309-347461:-1
so has part: feature:347309-347461:-1:exon
subclass of: SO_0000010

position:347309:-1
position: 347309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347461:-1
position: 347461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347309-347461:-1:exon

DMP02_RS07190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07190
old locus tag: RVIR1_03260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIKNQISGGNTLSSTEFENVSTLNNPIESGLDANAENLTLAGGIKHAKT
SIO_010081: DMP02_RS07190
subclass of: SO_0000673
so part of: DMP02_RS07190
location: complement(347309..347461)
location: region:347309-347461:-1
so has part: feature:347309-347461:-1:exon

WP_172593956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347309-347461:-1:exon

DMP02_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: alaS
locus tag: DMP02_RS01620
old locus tag: RVIR1_03270
so part of: sequence
location: 347658..350273
location: region:347658-350273:1
so has part: feature:347658-350273:1:exon
subclass of: SO_0000010

position:347658:1
position: 347658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350273:1
position: 350273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347658-350273:1:exon

DMP02_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: alaS
locus tag: DMP02_RS01620
old locus tag: RVIR1_03270
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035069.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MNSNALRELFLNYFAGQGHTVVPSASLVPAHDPSLLFTNAGMVPFKDVFLGLEKRAYSRAASSQRCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYSWKFLTEVLKLPPEKLWITVFEEDDEAAAIWLNEIKTDPSRFSRCGSNDNFWSMGDTGPCGPCSEIFYDHGPSIAGGPPGSPTADGDRYVEIWNLVFMQFQRAADGALSPLPKLSVDTGMGLERLAAVMQGVTNNYDTDLFQPLIKAVAEEAGITDFANTSLRVIADHIRSCAFLISDGVLPGNEGRSYVLRRIMRRAIRHGHKIGLDKPFFYRLVKPLAEQMSQAYPELERKRRSIEKIIVQEEQQFARTLTHGMKLFEQEVAKLKGKKQLPGDVLFRLYDTYGFPVDLTADVARERGLTIDMPGFEFEMQRQRNQSKASSQFATTPTFSLSGNLPTEFTGYKKLSQTKVAIVELLKGNELVESLSEGDEGYIVLQKTPFYAESGGQVGDVGQLAAESAEFLVTNTIKKGDVVLHSGRLTKGSLKKGDKINATVDMAKRRAITLNHSATHLLHAALRQILGEHVVQKGSLVEAERLRFDFSHTKPISSETLKEVEDLVNQQIRANFPVQTEVMSPEDAKRGGAMAIFGEKYGDSVRVLTMGDFSKELCGGTHVSRTGDIGLFKIMAETGVAAGIRRLQAVTGQAALNWIASLEEQTRQLAKLFKASSDNLVEKAQNKIQSKQSLQKQIEELQRSVVGMMGDELVSQAIEIRGIQLLMSEINGVDTTGLRYLLDQLKNKLNRAVIILASTDQGRTQFLISVTKELTDQIKANELANELAKLIGGKGGGRADFAQAGGEMSEGLEMAFKSAKNWVEAHLNGNYA
SIO_010081: DMP02_RS01620
subclass of: SO_0000673
so part of: DMP02_RS01620
location: 347658..350273
location: region:347658-350273:1
so has part: feature:347658-350273:1:exon

WP_126322361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347658-350273:1:exon

DMP02_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01625
old locus tag: RVIR1_03280
so part of: sequence
location: 350304..351527
location: region:350304-351527:1
so has part: feature:350304-351527:1:exon
subclass of: SO_0000010

position:350304:1
position: 350304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351527:1
position: 351527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350304-351527:1:exon

DMP02_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01625
old locus tag: RVIR1_03280
EC number: 2.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035916.1
GO function: GO:0004072 - aspartate kinase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate kinase
translation: MALIVQKFGGSSVGNIDKIQHVANKIIETRAQGHSLAVVVSAMEGETNRLISLAKTLNDQPDAREYDLLLATGEQAATALLAMALLGRGCPARSYNGFHVPIYTDNHHKKARILNIDESVLRDDIAAGRVPIIAGFQGISAEGNMTTLGRGGSDTTAAALAAILKADECQIYTDVDGIYTADPHIVSQAKLLDKIGFNEMTEFARAGAKVVQHRAVELASQYRVPLRVLSSFRKGMGTLIQLNEEGVAVEKATVTGVTASRQEAKMTVQGLSCEKEALTQFFSLLNDVRIEIDMLTQQLTSDVRMDITFTLARADYQQAEHVLQTLVKDGYAQAVIGNRKVAKLSIVGAGLHSHPGIMHTLFHALGAEGISIMLALSSALRVSLIVDESQVVRGIQVLHHAFNLGKE
SIO_010081: DMP02_RS01625
subclass of: SO_0000673
so part of: DMP02_RS01625
location: 350304..351527
location: region:350304-351527:1
so has part: feature:350304-351527:1:exon

WP_126322362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350304-351527:1:exon

DMP02_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: csrA
locus tag: DMP02_RS01630
old locus tag: RVIR1_03290
so part of: sequence
location: 351791..352021
location: region:351791-352021:1
so has part: feature:351791-352021:1:exon
subclass of: SO_0000010

position:351791:1
position: 351791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352021:1
position: 352021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351791-352021:1:exon

DMP02_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: csrA
locus tag: DMP02_RS01630
old locus tag: RVIR1_03290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034764.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLILTRRIGETLIIGDDVTVTVLGIKGHQVRLGINAPKEVSVHREEIYQRIQQEKQKSDGNVLEDDLDDLDEEDKH
SIO_010081: DMP02_RS01630
subclass of: SO_0000673
so part of: DMP02_RS01630
location: 351791..352021
location: region:351791-352021:1
so has part: feature:351791-352021:1:exon

WP_126322363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351791-352021:1:exon

DMP02_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01635
old locus tag: RVIR1_03300
so part of: sequence
location: 352085..352176
location: region:352085-352176:1
so has part: feature:352085-352176:1:exon
subclass of: SO_0000663

position:352085:1
position: 352085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352176:1
position: 352176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352085-352176:1:exon

DMP02_RS01635
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01635
old locus tag: RVIR1_03300
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:352119..352121,aa:Ser,seq:gct)
SIO_010081: DMP02_RS01635
subclass of: SO_0000673
so part of: DMP02_RS01635
location: 352085..352176
location: region:352085-352176:1
so has part: feature:352085-352176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352085-352176:1:exon

DMP02_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01640
old locus tag: RVIR1_03310
so part of: sequence
location: 352185..352261
location: region:352185-352261:1
so has part: feature:352185-352261:1:exon
subclass of: SO_0000663

position:352185:1
position: 352185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352261:1
position: 352261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352185-352261:1:exon

DMP02_RS01640
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01640
old locus tag: RVIR1_03310
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:352219..352221,aa:Arg,seq:acg)
SIO_010081: DMP02_RS01640
subclass of: SO_0000673
so part of: DMP02_RS01640
location: 352185..352261
location: region:352185-352261:1
so has part: feature:352185-352261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352185-352261:1:exon

DMP02_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01645
old locus tag: RVIR1_03330
so part of: sequence
location: complement(352949..353854)
location: region:352949-353854:-1
so has part: feature:352949-353854:-1:exon
subclass of: SO_0000010

position:352949:-1
position: 352949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353854:-1
position: 353854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352949-353854:-1:exon

DMP02_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01645
old locus tag: RVIR1_03330
inference: COORDINATES: protein motif:HMM:NF039820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5662 family protein
translation: MFNKQSFLNQPISQENIRSNYEIARPTREMYLNSFNYTDIFTREMAEYSYDRTEKHTKRVVKNVELLLEQADLKTLFNLSKDGFEKFKEKLIERAKSHDVSKLVHPEAEWYVYINCKDKEEYGVCLDSVKKEGIDCAIQHHWGFNKHHPEYYFIKKDGQLETDKSIIQERLKNMSDADLVEMVSDWFAMSQEFNTNPVQFFNNNVGLDKRWPFPPDKKEKIFKLIKMLQLAHKNESVPSLKNEENNSTASHIEHKDLTGANNHLIENSFFKKNIKSMATNQRTGQGEHCENVEELAIGIVR
SIO_010081: DMP02_RS01645
subclass of: SO_0000673
so part of: DMP02_RS01645
location: complement(352949..353854)
location: region:352949-353854:-1
so has part: feature:352949-353854:-1:exon

WP_126322364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352949-353854:-1:exon

DMP02_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01650
so part of: sequence
location: 354232..354567
location: region:354232-354567:1
so has part: feature:354232-354567:1:exon
subclass of: SO_0000010

position:354232:1
position: 354232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354567:1
position: 354567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354232-354567:1:exon

DMP02_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLASIVEIFCEIDDYCKEFFQGINQKFLPNPARQRKKPGRLCLSEIMTITILFHLSHYRKFKSFYLESVGPYLHTYFSSLVSYNRFVELQQSVIVPLASYLLSKHGEETGL
SIO_010081: DMP02_RS01650
subclass of: SO_0000673
so part of: DMP02_RS01650
location: 354232..354567
location: region:354232-354567:1
so has part: feature:354232-354567:1:exon

WP_126322365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354232-354567:1:exon

DMP02_RS07440
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07440
so part of: sequence
location: 354717..354887
location: region:354717-354887:1
so has part: feature:354717-354887:1:exon
subclass of: SO_0000010

position:354717:1
position: 354717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354887:1
position: 354887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354717-354887:1:exon

DMP02_RS07440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07440
inference: COORDINATES: protein motif:HMM:NF024999.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKVCFTKENVDDRKVLNILFKNLQGLAVADRGYISKEKQETLAKKGLRFITKVRKI
SIO_010081: DMP02_RS07440
subclass of: SO_0000673
so part of: DMP02_RS07440
location: 354717..354887
location: region:354717-354887:1
so has part: feature:354717-354887:1:exon

WP_126322366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354717-354887:1:exon

DMP02_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01665
old locus tag: RVIR1_03350
so part of: sequence
location: 355081..355464
location: region:355081-355464:1
so has part: feature:355081-355464:1:exon
subclass of: SO_0000010

position:355081:1
position: 355081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355464:1
position: 355464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355081-355464:1:exon

DMP02_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01665
old locus tag: RVIR1_03350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEIEKIKINTEEKIKNSPDNIFAHYLNVVISYSYAKAVEILYQIKASFFDKPEKTALFELQKSYLKSTACKLDSIKKIQEFTEGVGKPYASGIQFSLGRPLLRKLPSDNLPLLMEHVTELVNKYKF
SIO_010081: DMP02_RS01665
subclass of: SO_0000673
so part of: DMP02_RS01665
location: 355081..355464
location: region:355081-355464:1
so has part: feature:355081-355464:1:exon

WP_126322367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355081-355464:1:exon

DMP02_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01670
old locus tag: RVIR1_03360
so part of: sequence
location: complement(355461..356312)
location: region:355461-356312:-1
so has part: feature:355461-356312:-1:exon
subclass of: SO_0000010

position:355461:-1
position: 355461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356312:-1
position: 356312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355461-356312:-1:exon

DMP02_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01670
old locus tag: RVIR1_03360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIITKKLFYLLKVIQSSNHPNRVLLSEEHKKLVALLNSGLIPYSVPKSTQTAKLNQVYNTFDLHIDPNVFKTIINKIVDCKIIEALLDMPTEISYSHEEKMVLHEKLSVLKLLASLKQDLKEIAEFGEKYENMQRGFFEQNFQELNYLKITLTRSVTIDDIEWFIYTNIFDLMMIESELFTVPPTYIYQLLIKNTEQPMSKKNFNEHCQVLLNKKTQAGQSFNYGTFYSILYNIKYSLSHHLNKPFTECSNSTSPRFHTFPKSINKLPQLAIKNHFYRTVNKR
SIO_010081: DMP02_RS01670
subclass of: SO_0000673
so part of: DMP02_RS01670
location: complement(355461..356312)
location: region:355461-356312:-1
so has part: feature:355461-356312:-1:exon

WP_126322368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355461-356312:-1:exon

DMP02_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01675
old locus tag: RVIR1_03370
so part of: sequence
location: complement(356462..357031)
location: region:356462-357031:-1
so has part: feature:356462-357031:-1:exon
subclass of: SO_0000010

position:356462:-1
position: 356462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357031:-1
position: 357031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356462-357031:-1:exon

DMP02_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01675
old locus tag: RVIR1_03370
inference: COORDINATES: protein motif:HMM:NF012409.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 19 protein
translation: MSMNISKDNLKTALNPLIKAPEHSEEVLQSFYTLFPKYDITNEKRIAAFLAQASHETGGFKFFTEQGDKSYFDKYEPHTPLGKQLGNTEAGDGYKYRGRGIFQLTGRANYKHYSELVGIDILNDPDKASKPAVACQIACEFWKQNNLNALADKDDMRAITKHIEGGDHDADKRSKSYQTVLQTLKQNMV
SIO_010081: DMP02_RS01675
subclass of: SO_0000673
so part of: DMP02_RS01675
location: complement(356462..357031)
location: region:356462-357031:-1
so has part: feature:356462-357031:-1:exon

WP_126322369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356462-357031:-1:exon

DMP02_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01680
old locus tag: RVIR1_03380
so part of: sequence
location: 357129..357887
location: region:357129-357887:1
so has part: feature:357129-357887:1:exon
subclass of: SO_0000010

position:357129:1
position: 357129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357887:1
position: 357887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357129-357887:1:exon

DMP02_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01680
old locus tag: RVIR1_03380
inference: COORDINATES: protein motif:HMM:NF019846.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTKPTERFTETVQDYVKYRPSYPKAVLDTLIDECGLNKDKVIADIGSGTGLLAQLFLDNGNTVYGVEPNQAMREAGEAYLQRYTHFYSRAGSAEATGLADKSIDFITVGTAFHWFDPEKTKQEFQRIAKSNAWVLLVWNVRSTEKSALVSDYEGLIRQYGKDYSTSNAKKMDKVAMDRFFKPQSIRTASFENTQQFDWQGFKGRLLSTSYSLRAGDLGYEAMLAGLKTIFARYQKGGIVTFLYDTKLYYSPI
SIO_010081: DMP02_RS01680
subclass of: SO_0000673
so part of: DMP02_RS01680
location: 357129..357887
location: region:357129-357887:1
so has part: feature:357129-357887:1:exon

WP_126322370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357129-357887:1:exon

DMP02_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hemW
locus tag: DMP02_RS01685
old locus tag: RVIR1_03390
so part of: sequence
location: 357935..359080
location: region:357935-359080:1
so has part: feature:357935-359080:1:exon
subclass of: SO_0000010

position:357935:1
position: 357935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359080:1
position: 359080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357935-359080:1:exon

DMP02_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hemW
locus tag: DMP02_RS01685
old locus tag: RVIR1_03390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005772850.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM family heme chaperone HemW
translation: MLKTPPLSLYIHFPWCIRKCPYCDFNSHTLRAELPEMAYIDALIEDLDQQLPKVQDPPLVSIFMGGGTPSLFSPSAINYLLDAIRKRLDFSTDIEITLEANPGTVEYQRFAGYCAAGVNRLSIGIQSFQDHQLKALGRIHNGNEASNAVMAAKAAGFSNINLDLMHGLPGQSLKEGLGDLSRALELDPSHISWYQLTIEPNTEFAVRPPTLPIDDAIWELQVQAKTHLTKNAYKQYEISAYSRESYICKHNQNYWEFGDYLGIGAGAHSKLSDAENQTITRAWKHKNPKDYLGRKNNFLAEEKLIAQEELAFEFMLNALRLHYPISIALFEQRTGLSFSTLTGPLFEAEKLELLKVTKTDILLSDRGKRFYNDLVTLFLPR
SIO_010081: DMP02_RS01685
subclass of: SO_0000673
so part of: DMP02_RS01685
location: 357935..359080
location: region:357935-359080:1
so has part: feature:357935-359080:1:exon

WP_126322371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357935-359080:1:exon

DMP02_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: trmB
locus tag: DMP02_RS01690
old locus tag: RVIR1_03400
so part of: sequence
location: complement(359085..359801)
location: region:359085-359801:-1
so has part: feature:359085-359801:-1:exon
subclass of: SO_0000010

position:359085:-1
position: 359085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359801:-1
position: 359801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359085-359801:-1:exon

DMP02_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: trmB
locus tag: DMP02_RS01690
old locus tag: RVIR1_03400
EC number: 2.1.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034873.1
GO function: GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(46)-N7)-methyltransferase TrmB
translation: MNPINPLLKTNSPPSFKPIRSFVHRQASLSNERKRALSTLLSEYGLATKKELLNLEHAFQRVAPTTLEIGFGMGHHLLEQAQRYPEQNFLGIEVHRPGIAAVLLGIEALKLHNLKICPADAIEILDNCIADKSLHAIQIFFPDPWPKRRHHKRRLIQLQSAQLLQKKLKVGGELQLATDWQDYAEHMLVVLENTFGLKNRAGKNQFSPRLSQRALTKFEKRGQQLGHQIWDLVFYSTE
SIO_010081: DMP02_RS01690
subclass of: SO_0000673
so part of: DMP02_RS01690
location: complement(359085..359801)
location: region:359085-359801:-1
so has part: feature:359085-359801:-1:exon

WP_126322372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359085-359801:-1:exon

DMP02_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: elbB
locus tag: DMP02_RS01695
old locus tag: RVIR1_03410
so part of: sequence
location: complement(359798..360463)
location: region:359798-360463:-1
so has part: feature:359798-360463:-1:exon
subclass of: SO_0000010

position:359798:-1
position: 359798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360463:-1
position: 360463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359798-360463:-1:exon

DMP02_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: elbB
locus tag: DMP02_RS01695
old locus tag: RVIR1_03410
EC number: 4.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenoid biosynthesis glyoxalase ElbB
translation: MQEQTIAVILSGCGALDGSEIHEATLTLLALDRAGIHYQCLAPNIPQTQVSNMLTKENSTHAQRNVLEESARIARCKIKDIATVNPADYAAVIFPGGFGAALNLCSFGLNKEDYSVQADVLKFSKAMIEAKKPAGFICIAPVLAAKLYPPGIKLTIGEDKETAAILTKMGVEHISCTTTDCVVDEKHKVVSTPAYMLTRSINEVATGIECLVKELLHLLAR
SIO_010081: DMP02_RS01695
subclass of: SO_0000673
so part of: DMP02_RS01695
location: complement(359798..360463)
location: region:359798-360463:-1
so has part: feature:359798-360463:-1:exon

WP_126322373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359798-360463:-1:exon

DMP02_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01700
old locus tag: RVIR1_03420
so part of: sequence
location: 360592..362343
location: region:360592-362343:1
so has part: feature:360592-362343:1:exon
subclass of: SO_0000010

position:360592:1
position: 360592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362343:1
position: 362343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360592-362343:1:exon

DMP02_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01700
old locus tag: RVIR1_03420
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MSMLQQQCKRGTWCFDLLALTAFIVLLFGLFLGSRPLSTPDEARYSEISREMLVLHDFVTPHLNGVKYFEKPPLFYWIQAASIKLFHPELGQQSRSQSITKLDKPWSIKSINEWIVRLPNALIALLGCLLLYAAGRQLFDRQTGLISAVILATSFLYFTLARMVTLDMSLSVFLSGSLLAFLVAANTPPGCKRRYIFYLAYSFAALAVLTKGLIGIVFPVMIVGSWILLTQQWRLLKQMFLPTGILLFLLIVLPWHILVQLKNPEFFQFYFVDQQFLRYSTLIAQRYQPAWFFVPIFLAGFLPWVVFLFQAIVAYFPKTWQQIAEKRQHLFLLLWISIIFIFFSLSHSKLIPYILPIFPAVALLTARYLATHAYQASAKWGIILLPCIWITLGLLGTLWLWHHPVVDLPKPGIPFLVAGYSVFLLASLLAAFIYIRHRVKIAFILLTLGSAISFIIFSTGIPYVDTRSIKPLVQILKPLLHAQDKIVAFGNYYQDLPFYLNQQVMTVNVEGELGFGMQHQNTSAWMLKEDKFWPLWESDQRVFMLVDQALYQFFKKNKKSIYFVTATPQDVLLTNHPILKDKQ
SIO_010081: DMP02_RS01700
subclass of: SO_0000673
so part of: DMP02_RS01700
location: 360592..362343
location: region:360592-362343:1
so has part: feature:360592-362343:1:exon

WP_126322374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360592-362343:1:exon

DMP02_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01705
old locus tag: RVIR1_03430
so part of: sequence
location: 362340..363290
location: region:362340-363290:1
so has part: feature:362340-363290:1:exon
subclass of: SO_0000010

position:362340:1
position: 362340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363290:1
position: 363290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362340-363290:1:exon

DMP02_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01705
old locus tag: RVIR1_03430
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MTLPYLSIVIPVYNESDNLEQLYQRLISSLDKQGKSYEILFINDGSKDSSYELLNELQQRRPEQIRIIHFNGNFGQHMAVMAGFERVRGEVVITLDADLQNPPEEIPALVQAIEKGHDYVGGVRQKRQDSFFRRYASKLNNWLRYKMTKIRLTDQGCMLRAYSRPLIDRMVASKETSLFIPAQAYSLSNSPTEIAVAHDAREAGESKYNLYRLLRLNFDLMTGFSLLPLQVFTMIGILISGLSGLFVMYMFLRRLFIGPEAEGVFTLFAILFFLMGICLMGLGIMGEYIGRIYQEVRQRPRYVIKEIVESPLKDKQ
SIO_010081: DMP02_RS01705
subclass of: SO_0000673
so part of: DMP02_RS01705
location: 362340..363290
location: region:362340-363290:1
so has part: feature:362340-363290:1:exon

WP_126322375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362340-363290:1:exon

DMP02_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01710
old locus tag: RVIR1_03440
so part of: sequence
location: 363371..364357
location: region:363371-364357:1
so has part: feature:363371-364357:1:exon
subclass of: SO_0000010

position:363371:1
position: 363371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364357:1
position: 364357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363371-364357:1:exon

DMP02_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01710
old locus tag: RVIR1_03440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035153.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MIHEDGELSGNTAENSSAKSIAIKIDVDTERGTRIGVPNLIQLFKQLNIPATFLFSLGPDNTGRAIKRIFRPGFLKKVSRSNVVGVYGFRTLLNGVLWPGPHIGRHCEDIMRQTEKAGHEVGIHCYDHIRWQDNLHAWAKEGVFKEFKKACDEFQRIFLRAPLTAGAAGWQASAYSLAAYDAANLYYASDARGIYPCFPKVGATVFKTLQIPTNLPTLDELLGRTEFPLASLDEYYLGLLRDDVVNVLTIHAEIEGMAYLSFFTEFLKKAQRQGIGFQTLQTVAQRCLENRDRIPVCELIQGTVDGRSGTLAVLENEKSIIPDAHNQK
SIO_010081: DMP02_RS01710
subclass of: SO_0000673
so part of: DMP02_RS01710
location: 363371..364357
location: region:363371-364357:1
so has part: feature:363371-364357:1:exon

WP_126322376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363371-364357:1:exon

DMP02_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01715
old locus tag: RVIR1_03450
so part of: sequence
location: complement(364342..365058)
location: region:364342-365058:-1
so has part: feature:364342-365058:-1:exon
subclass of: SO_0000010

position:364342:-1
position: 364342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365058:-1
position: 365058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364342-365058:-1:exon

DMP02_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01715
old locus tag: RVIR1_03450
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF025054.2
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MHNTQLLDWDSHILGLSVAKILTSPLDAQQLATQLQTLKTQGVKLVYWLIHSTDTLSQQAAQDCGGFLADEKLTYCLDLMALPPLPDYKEVETYLTPTANAELETIALEISQFSRFAHDPKLSTEQVSKLYTAWINNACRKMVAKAVLVIKKQASIAGMVVIDEKQGRGDLSLVGVMPAYQGQGLGKRLVQAAQHWCLEHNYFISQVLTQKTNPKACRLYESCGYQLEKEEYFYHFWL
SIO_010081: DMP02_RS01715
subclass of: SO_0000673
so part of: DMP02_RS01715
location: complement(364342..365058)
location: region:364342-365058:-1
so has part: feature:364342-365058:-1:exon

WP_126322377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364342-365058:-1:exon

DMP02_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01720
old locus tag: RVIR1_03460
so part of: sequence
location: 365114..366136
location: region:365114-366136:1
so has part: feature:365114-366136:1:exon
subclass of: SO_0000010

position:365114:1
position: 365114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366136:1
position: 366136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365114-366136:1:exon

DMP02_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01720
old locus tag: RVIR1_03460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035584.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-4-keto-pentose/UDP-xylose synthase
translation: MSLKVLILGINGFIGSSLLEQALATKNDWHFIGLDLADNKITDFLDNPRLQFKRGDINQDTSWIEQQIQVCDVVLPLVAIATPATYVNNPLAVFELDFEANLRIIRLCVKHKKRVVFPSTSEVYGMCTDEEFDEQTSNFVLGPINKPRWIYSCSKQMLDRVIHAYGLQNKLSYTLFRPFNWMGAKLDDPHNPKPGSSRVVSQFMGNILRGEAIQLVNGGQQRRTFIDIEDGIEALIKIIANENEAASQRIFNIGNPKNDISIRELAELLIEQVKNYPKYADAAKNTQLQTVAADNYYGKGYQDVDRRVPSIKNAQNYLGWQPKIDIKASVKKILDYYLSE
SIO_010081: DMP02_RS01720
subclass of: SO_0000673
so part of: DMP02_RS01720
location: 365114..366136
location: region:365114-366136:1
so has part: feature:365114-366136:1:exon

WP_126322378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365114-366136:1:exon

DMP02_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: lpxK
locus tag: DMP02_RS01725
old locus tag: RVIR1_03470
so part of: sequence
location: complement(366096..367208)
location: region:366096-367208:-1
so has part: feature:366096-367208:-1:exon
subclass of: SO_0000010

position:366096:-1
position: 366096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367208:-1
position: 367208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366096-367208:-1:exon

DMP02_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: lpxK
locus tag: DMP02_RS01725
old locus tag: RVIR1_03470
EC number: 2.7.1.130
inference: COORDINATES: protein motif:HMM:NF014645.2
GO function: GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraacyldisaccharide 4'-kinase
translation: MLALWNKNYIAYLLWPFSLLYRTFVFFRHKLYQFHIKKINKFPVPIIVIGNLTVGGTGKTPLVIEVVQFLQKKGWRPGVISRGYGGKAKHYPYQVHTQSNPREVGDEPLLIVRNTGCPTVIDPNRSRGVNTLLGKKNCNIVVSDDGLQHLALGRNIEIAVIDGQRRFGNGFCLPAGPLREPISRLKTVDFIIIKEAYSQQLDFRQGAARTKPPEGILIHEDGELNGNTAENSSAKSIAGPNEFGMLLVPEYFYQLIHPENKQNPDYFHGKQLHAVAGIGNPEQFFNNLRALGLTIIEHPFPDHHFFKPRDLNYGKDAIILMTEKDAVKCRGLVDARLWCLKAKATLDEAFFNSLLNRITQINNNPKSSSR
SIO_010081: DMP02_RS01725
subclass of: SO_0000673
so part of: DMP02_RS01725
location: complement(366096..367208)
location: region:366096-367208:-1
so has part: feature:366096-367208:-1:exon

WP_126322379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366096-367208:-1:exon

DMP02_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: pdxY
locus tag: DMP02_RS01730
old locus tag: RVIR1_03480
so part of: sequence
location: complement(367288..368148)
location: region:367288-368148:-1
so has part: feature:367288-368148:-1:exon
subclass of: SO_0000010

position:367288:-1
position: 367288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368148:-1
position: 368148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367288-368148:-1:exon

DMP02_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: pdxY
locus tag: DMP02_RS01730
old locus tag: RVIR1_03480
EC number: 2.7.1.35
inference: COORDINATES: protein motif:HMM:TIGR00687.1
GO function: GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO process: GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal kinase
translation: MNILSIQSHVSYGYVGNKAATFPLQSLGFDVWPINTVQFSNHTGYGSWQGDIFPPEHIHCLVKGLESLDLARQCDAVLSGYIGDKAIGEVIIETVQRFKQVNPKLIYLCDPVMGDPGGKGCFVKEDIPAFFREKCLEVADIITPNHFEAEILYEQEISTLEQLQQACSFFHNKGVKIVVITRLQLKKQPELEKYSDFLSVKNAQQCLAITPKLKLSHPLNGSGDLFSALYLGHFLLTKDPLQAFERALNTTHKIISDTISAKQHELKIINNYCDPSPNTITLEPLK
SIO_010081: DMP02_RS01730
subclass of: SO_0000673
so part of: DMP02_RS01730
location: complement(367288..368148)
location: region:367288-368148:-1
so has part: feature:367288-368148:-1:exon

WP_126322380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367288-368148:-1:exon

DMP02_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01735
old locus tag: RVIR1_03490
so part of: sequence
location: complement(368286..368362)
location: region:368286-368362:-1
so has part: feature:368286-368362:-1:exon
subclass of: SO_0000663

position:368286:-1
position: 368286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368362:-1
position: 368362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368286-368362:-1:exon

DMP02_RS01735
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01735
old locus tag: RVIR1_03490
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(368326..368328),aa:Arg,seq:cct)
SIO_010081: DMP02_RS01735
subclass of: SO_0000673
so part of: DMP02_RS01735
location: complement(368286..368362)
location: region:368286-368362:-1
so has part: feature:368286-368362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368286-368362:-1:exon

DMP02_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01740
old locus tag: RVIR1_03510
so part of: sequence
location: 368700..369983
location: region:368700-369983:1
so has part: feature:368700-369983:1:exon
subclass of: SO_0000010

position:368700:1
position: 368700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369983:1
position: 369983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368700-369983:1:exon

DMP02_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01740
old locus tag: RVIR1_03510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034692.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSVSNKHFTNHRFYPWLVIALASSFLFYKYILQVSPSIMTDELMHEFHIEGVGLGNLAASFFYSFLIAQLFVGMLLDRYSPRLLTTVALLLCALGAYGFSQADSLAFATWARTLMGVGAAFATVSYMKMTSLWFKPSQFAFVGGLLASAAMLGAVAGQLPLSLMVNGVGWRSSLGLCAVLGVVLAVLFYVIVCDKPQAQNRSVAVNIAAPPFSLRDVWAVLSNKQNWLITLYSGLAFSPIDAFAGLWCIPFLKEGYQLTHTHAAFFVSFIFLGLALGSPLLGLLSDRLGRRRNVMLGSGCVALVTITGVIYATHLPLWLLGSLLFLFGFSTGAFMLGFALGRELNKITVAATIIALINTGDIVFSAVTEPLIGKLLDSGWSGKIIGHIHYFSVLEYRRALMLLPVYILLSIILLFFIRESNTRQKTV
SIO_010081: DMP02_RS01740
subclass of: SO_0000673
so part of: DMP02_RS01740
location: 368700..369983
location: region:368700-369983:1
so has part: feature:368700-369983:1:exon

WP_126322381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368700-369983:1:exon

DMP02_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01745
old locus tag: RVIR1_03520
so part of: sequence
location: complement(370183..370587)
location: region:370183-370587:-1
so has part: feature:370183-370587:-1:exon
subclass of: SO_0000010

position:370183:-1
position: 370183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370587:-1
position: 370587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370183-370587:-1:exon

DMP02_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01745
old locus tag: RVIR1_03520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKKISLNLLLVLGLSSSAWAADSTPPQTSNIQNNAIEFARQAGSIAGVTQACGQNVTNFSQRIAEAISALTSNPADKAGAMLVYQQIMNEAQANEQKTQTIPCTKALEDYRNLPIMQADYKEKVIAQLNTAKP
SIO_010081: DMP02_RS01745
subclass of: SO_0000673
so part of: DMP02_RS01745
location: complement(370183..370587)
location: region:370183-370587:-1
so has part: feature:370183-370587:-1:exon

WP_126322382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370183-370587:-1:exon

DMP02_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01750
old locus tag: RVIR1_03530
so part of: sequence
location: complement(370608..371534)
location: region:370608-371534:-1
so has part: feature:370608-371534:-1:exon
subclass of: SO_0000010

position:370608:-1
position: 370608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371534:-1
position: 371534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370608-371534:-1:exon

DMP02_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01750
old locus tag: RVIR1_03530
inference: COORDINATES: protein motif:HMM:NF013720.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folate-binding protein YgfZ
translation: MVKTTTKNGKIDLTDFGIIQVSGKKAKLFLQGQLTCNVEEVDENQTRLGAHCDAKGRIQATLRLFFYQDAYYFLLPRTMLSHLLQCLKKYAVFSAVNLTDVTQHWKIIGLIGDSSAELLRQHTLFPEQTNSLSASASLICLAIPGSTPRFILLTPDEKSAFFIHTVEELPLSDWYLRDIIAGIPSIYPETIAQFTPHQLNYPAIGGVSFNKGCYIGQEIIARTHYLGQSKSRLYRVAFQANHQFPPGTAIQNEQGVRQGTLIMSANTEKDGYQALVCLQSQAISHTIHLESSQGPALQLLELPIILQE
SIO_010081: DMP02_RS01750
subclass of: SO_0000673
so part of: DMP02_RS01750
location: complement(370608..371534)
location: region:370608-371534:-1
so has part: feature:370608-371534:-1:exon

WP_126322383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370608-371534:-1:exon

DMP02_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01755
old locus tag: RVIR1_03540
so part of: sequence
location: 371707..372234
location: region:371707-372234:1
so has part: feature:371707-372234:1:exon
subclass of: SO_0000010

position:371707:1
position: 371707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372234:1
position: 372234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371707-372234:1:exon

DMP02_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01755
old locus tag: RVIR1_03540
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat U domain-containing protein
translation: MLYLVRIWAGLFLIFIWQNALSGTVAGALAVTAKVGGDDKCVINGVTNLIFPSYNSFNPKPDDASGSMTVTCTANLAYEVGMGRGDGAEVKKGQHRTCIKNDRGEELLNGGDSLEYNLFSDPNHKSDWGSESGENTMHRIGTGLAQIINIYGEIPIHQPVEAGSYTDWVTIFVAF
SIO_010081: DMP02_RS01755
subclass of: SO_0000673
so part of: DMP02_RS01755
location: 371707..372234
location: region:371707-372234:1
so has part: feature:371707-372234:1:exon

WP_126322384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371707-372234:1:exon

DMP02_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01760
old locus tag: RVIR1_03550
so part of: sequence
location: 372390..372887
location: region:372390-372887:1
so has part: feature:372390-372887:1:exon
subclass of: SO_0000010

position:372390:1
position: 372390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372887:1
position: 372887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372390-372887:1:exon

DMP02_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01760
old locus tag: RVIR1_03550
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat U domain-containing protein
translation: MFKARNVLFGLVLLFISQFSFAGMVPGTLSITANVAAACSVGVANLLPFGTYTAGVDLDVNGLLQVTCTATSNYNIALDAGSGVGATIPTRILTNPSPAGTLQYTIYTDPTRTTVWGNGTTGSTVAGVGTGAAQSVTVPGRIFASQTGTVSPGNYTDTVNITVNF
SIO_010081: DMP02_RS01760
subclass of: SO_0000673
so part of: DMP02_RS01760
location: 372390..372887
location: region:372390-372887:1
so has part: feature:372390-372887:1:exon

WP_126322385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372390-372887:1:exon

DMP02_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01765
old locus tag: RVIR1_03560
so part of: sequence
location: 373114..373614
location: region:373114-373614:1
so has part: feature:373114-373614:1:exon
subclass of: SO_0000010

position:373114:1
position: 373114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373614:1
position: 373614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373114-373614:1:exon

DMP02_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01765
old locus tag: RVIR1_03560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat U domain-containing protein
translation: MLFRVKILLILFTLFMSQLTWAATATGTLPVSATVIAACLVGTVTPVAFGNYDPTSTTDNIAGQGVIPVTCTNGTSYTIGLNAGTFTGATVTTRRMTGTSAAGLAYGLFQNTGRTTNWGNTPGTDTPAAVVATGTSQSVNVYGKITALQAVAAGSYSDSVTITVNF
SIO_010081: DMP02_RS01765
subclass of: SO_0000673
so part of: DMP02_RS01765
location: 373114..373614
location: region:373114-373614:1
so has part: feature:373114-373614:1:exon

WP_197720789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373114-373614:1:exon

DMP02_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01770
old locus tag: RVIR1_03570
so part of: sequence
location: 373648..374361
location: region:373648-374361:1
so has part: feature:373648-374361:1:exon
subclass of: SO_0000010

position:373648:1
position: 373648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374361:1
position: 374361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373648-374361:1:exon

DMP02_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01770
old locus tag: RVIR1_03570
inference: COORDINATES: protein motif:HMM:NF012565.2
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus periplasmic chaperone
translation: MDVGYRLGLLLLGFLLTSPVFANVYGVTPVQLFLSSKQMIGVVSVTNESEESGLLQLSLVDWKQNQGKDIYKKSHDILMTPPLFKLPPHKTQVIRFALKHPVFNASQQTYRLHIKELEQPRQKKLGQTLYFLMDISLPLFVQPQHVLEQFVWSTQRLNPKHIKLKLYNDGNVTLFVKEWQLLSKEPQAVMPQKKSTFAYVLPHQSHSWIVAVNSNTKYTDIKSNINGQSKKSVLHRL
SIO_010081: DMP02_RS01770
subclass of: SO_0000673
so part of: DMP02_RS01770
location: 373648..374361
location: region:373648-374361:1
so has part: feature:373648-374361:1:exon

WP_126322386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373648-374361:1:exon

DMP02_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01775
old locus tag: RVIR1_03580
so part of: sequence
location: 374324..376765
location: region:374324-376765:1
so has part: feature:374324-376765:1:exon
subclass of: SO_0000010

position:374324:1
position: 374324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376765:1
position: 376765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374324-376765:1:exon

DMP02_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01775
old locus tag: RVIR1_03580
inference: COORDINATES: protein motif:HMM:NF012786.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MDKAKNRFYIDFKYSLVACFIVFCLLNSIVTEAKQETGFLEKPPTTEKEKFYLIPLLLEIKLNESLLPDVTQAYKDRLGHVWIDRSAFCRWHMHLPHHRPFLYEGQKLYQLNWYPGLTYQLDQYAMQLSLQVPASLFTAQTFDPLSKRLGALRPKEPGAFLNYDMVGLKNNSPEINQTNLSALMGLGLFNRLGVGTADVLAYNKYANDITLLTSQSNKLVRLNTTWTLDEPEKIASWRFGDAITGSTYWSGAVRFAGIQYATNFNTQPNLVTFPLPGYEGEAAIPSTVDVFVNSVLNQQQIVNNGPYIFNNIPVISGAGTVNIVTQDLLGRSQVVSFPYYASPLLLKPNLVNFSYEAGFARDNYGVDSNDYGRFLGVATYQRGITDHLTLGGHAEVLFDQQTLGFSADYLLNQYGVASLAVSGGHNSLGEGGLLALGFVHQGAQFSYDFNTSLTTLNYLQLGDQPNTSPPSVINQLFFGYSLTDYGSLSTSYTMINSRNFNTANGFSNTPTARLVTASYSHNLFKNISLTVGFVGDLRNSQTNQAFITLVFAPDINHAISNSSNWQNHQFQDVLQFSKPVPLGTGYGYNLFASNNSSRYAGADITLQNEVGAYTARLGQGRGLASYELDASGSVIYFAGNGFLARKLKNSFALVQVPEFPGVDVFYENQLMGHTDKSGNLLITQLLTYQENKIAIEPTTLPLDTQIGMTTQTAIPYYSSGVLVKFPVKHIQGVVMHLLAPNGQPVPVGAELVLNTDHACMTYPVGYEGEVYIPDISDSTLVGSAHWDQHVYYFSVNLPKTDDPIIELGEVPCY
SIO_010081: DMP02_RS01775
subclass of: SO_0000673
so part of: DMP02_RS01775
location: 374324..376765
location: region:374324-376765:1
so has part: feature:374324-376765:1:exon

WP_126322387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374324-376765:1:exon

DMP02_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01780
old locus tag: RVIR1_03590
so part of: sequence
location: 376756..377262
location: region:376756-377262:1
so has part: feature:376756-377262:1:exon
subclass of: SO_0000010

position:376756:1
position: 376756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377262:1
position: 377262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376756-377262:1:exon

DMP02_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01780
old locus tag: RVIR1_03590
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat U domain-containing protein
translation: MLLKKINGVGWRYFICVLVYCFYSQAAYAACSGLGCSCSVGTTGVAFGTYNPTLGTADTANGNVAVTCSALVLFTASYVISLGKGASATYSPRFMNLLGVHLNYNLYTTAGFTSIWGDATGGSVTVSDSYTAIALSQTRNYTVFGRIPALQTVGAGTYIDSVTVTVTY
SIO_010081: DMP02_RS01780
subclass of: SO_0000673
so part of: DMP02_RS01780
location: 376756..377262
location: region:376756-377262:1
so has part: feature:376756-377262:1:exon

WP_126322388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376756-377262:1:exon

DMP02_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01785
old locus tag: RVIR1_03600
so part of: sequence
location: 377427..377921
location: region:377427-377921:1
so has part: feature:377427-377921:1:exon
subclass of: SO_0000010

position:377427:1
position: 377427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377921:1
position: 377921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377427-377921:1:exon

DMP02_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01785
old locus tag: RVIR1_03600
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat U domain-containing protein
translation: MGFFFKWIALLFFLLLSISPAFAVINTSSMMIGVDVVSDCTISATPLIFGLYNPNACTSTESTARLRVLCTLNTPYHVALDQGAGSAATTRLRSMSGPENSSIRYTLSQNPTHTINWGNIIGVDTKLRIGNGLQQILVVYGQIPPKQNVGIGSYRDIVNVNIIF
SIO_010081: DMP02_RS01785
subclass of: SO_0000673
so part of: DMP02_RS01785
location: 377427..377921
location: region:377427-377921:1
so has part: feature:377427-377921:1:exon

WP_126322389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377427-377921:1:exon

DMP02_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01790
old locus tag: RVIR1_03610
so part of: sequence
location: 378288..385625
location: region:378288-385625:1
so has part: feature:378288-385625:1:exon
subclass of: SO_0000010

position:378288:1
position: 378288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385625:1
position: 385625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378288-385625:1:exon

DMP02_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01790
old locus tag: RVIR1_03610
inference: COORDINATES: protein motif:HMM:NF017180.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YDG domain-containing protein
translation: MMNAQSAPIGAQVTAGTGSISQSGNTTTINQQSQNLSLNWNQFDIAPKETVNFAQPGRNAIAVNRVLGSNQASQIQGHLNANGQVWLINPNGVVFGKNSTVNVGGLLASTLDIADSELNKSQRQFSGSGTGSIINKGNIQAAKGGYVAMIANIVSNQGRITTPQGTTALAAGSQVTVTFAENQLTGIRIDKSTLNNLVENKQIIRANGGTVIMTAGAHDSLLSSAVNNGGIVEAQTVSKHKGEIILLGGMDAGTTTVSGTLDATAPHSGKGGSIETSAAHVKIAPEVKITTQSSEGAAGTWTIDPQDYTIAASGGDITGSQVSALLASNNIIISSAQGQTAGTGNLNVNNAITWSNTNSLTLNAVRNVNFNSGGTITNTAGGTLNVRADSGATGTGTIVMGGGSINISGAGGAINFYYNPATFGTPSTFTNVTAGAGTTFTPYMLINTPANLAAIATAPNNTRNYALGTNLNLSSIANFTPITFSGKFDGLNNTISNLTITGSNISVGLFNTLSAAAIVKNLTLSNVNVSGQAYVGSLAGTNNGTVSNITVSGSVKGNAAFVGGVFGIALPGSSGNCITSSVNVSATGINDISDYVGGFSGSITGGTYTNNTVTGSVTTGAHNRYIGGFAGYNNATIKNSSYTGTMITPYDGILGGFIGFTDPASVVQGVYSTATLNAGDYGYDSNGGLIGVNNGTIDSSYATGNLTFGQSWNVGGLVGLNANNISNSYATGNVSITPGPVPVGNGLQTFIQNYGGLVGQNIGGALSNVYATGNLIATGTVANSGTRSVGGLVGYMPGGSISRAYATGKVTAVASSNAFGGLLGYYAAGAITNVYASGNVSVTAVPGVAIPPSAIGGLIGFLGSGTLSNGYSIGSVNGSVGATNIGGLIGQFSGAVTGRSFWDTITSGRATSAGGANVVGMTTANMQTQANFTSATAANGNVNPNWNFSSVWAMGTGSYLYPVFSPPNAPVVTPGANCPPGTVSYYPLTLPNLSASNKVYDGTTLATVTGTLSGILPGDTVSVSSLSGTFNNKNVGTSKPVTVTQPGLSGANASKYLLVQVSLNNITANITPRPLTLTATAQSKVYNGTTATTTTTLTPMGVITGDIVSFSPTGTTATFDTKNVGNNKAVTVSNIVGSGADINNYSYLPITTTTANITKLALTLNAAANNKVYNGTTTATISTLTPVGVITGDIVSFSPTGTTATFDTKNVGNNKPVTVSNIVGSGADINNYSYQPTVMTAADITPLPITLNAVANNKVYDGTITATISTLTPVGVITGDMVIFSPTGVTAKFDTKDVGNGKSVMVSNIVGSGADINNYSYLPTTTTTADITKRALTLSAAADSKVYDGTTTTTVTALTPVNAISGDTINFNPATATATFDTKNVGNNKVVTVSNIIASGADAGNYSFASTTTTQANITQRALTLNVVANNKVYDGTTTATISTLTPVGVVTGDMVNFSPTGTTATFDTKNVGNNKAVTVSNITASGADAGNYSFASTTTTQADITQRALTLDAVVNSKVYDGTTTAMINTLTPAGVITGDIVSFNPTGTTATFDTKNVGNNKPVTVSNITASGADAGNYSFPSTINTQGNITQRALSLSAVVDNKVYDGTTTAILVSITPDNLISGDTVNFNPAAATATFNTKNVGRDKPVTVSNIIGSGVDINNYSYMSSITTTANITQRALTLSAVADNKVYDGTTTAIINAITPNDVITGDTVNFSPIGTIATFDTKNVGNNKAVTVSNITASGADAGNYSFPSTATAQADITQRALTLNAVANDKVYNGTTTAILAAITPNNVISGDVINFNPATATATFDTKNVGNNKAVTVSNITASGADAGNYSFPSTTTAQADITQRALTLNAVANNKVYDGTTTATISTLSPIGVVTGDIVNFNPTGTTATFDTKNVGNNKAVTVSNITASGADAGNYSFASTTTTQADITQRALTLNVVANDKVYNGTTTAILAAITPNNVISGDVINFNPATATATFDTKNVGNNKAV…
SIO_010081: DMP02_RS01790
subclass of: SO_0000673
so part of: DMP02_RS01790
location: 378288..385625
location: region:378288-385625:1
so has part: feature:378288-385625:1:exon

WP_172593957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378288-385625:1:exon

DMP02_RS07320
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07320
old locus tag: RVIR1_03640
pseudo: true
so part of: sequence
location: complement(386256..387956)
location: region:386256-387956:-1
so has part: feature:386256-387956:-1:exon
subclass of: SO_0000010

position:386256:-1
position: 386256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387956:-1
position: 387956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386256-387956:-1:exon

DMP02_RS07320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07320
old locus tag: RVIR1_03640
inference: COORDINATES: protein motif:HMM:NF015803.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: DMP02_RS07320
subclass of: SO_0000673
so part of: DMP02_RS07320
location: complement(386256..387956)
location: region:386256-387956:-1
so has part: feature:386256-387956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386256-387956:-1:exon

DMP02_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01810
old locus tag: RVIR1_03650
so part of: sequence
location: complement(387998..388074)
location: region:387998-388074:-1
so has part: feature:387998-388074:-1:exon
subclass of: SO_0000663

position:387998:-1
position: 387998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388074:-1
position: 388074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387998-388074:-1:exon

DMP02_RS01810
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS01810
old locus tag: RVIR1_03650
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(388038..388040),aa:Ile,seq:cat)
SIO_010081: DMP02_RS01810
subclass of: SO_0000673
so part of: DMP02_RS01810
location: complement(387998..388074)
location: region:387998-388074:-1
so has part: feature:387998-388074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387998-388074:-1:exon

DMP02_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpoD
locus tag: DMP02_RS01815
old locus tag: RVIR1_03660
so part of: sequence
location: complement(388298..390313)
location: region:388298-390313:-1
so has part: feature:388298-390313:-1:exon
subclass of: SO_0000010

position:388298:-1
position: 388298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390313:-1
position: 390313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388298-390313:-1:exon

DMP02_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpoD
locus tag: DMP02_RS01815
old locus tag: RVIR1_03660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035903.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MDFEQQQTRLRKLIAHGRKLGFVTYAEINDCLVEENDSDGEAGGNSTHHLGSSASEPEHDQSQLEEIISMLNELNISVCEVPPDIETQLIPTNLSDEESSSDNTSTLGNIGAELGRTTDPVRMYMREMGTVELLTREGEIKLAKRIEEGLQAILVALAQYPENIAYVLDDYARYERQEIRLNDIISGFLDLEELSIPLEIATKEDETISDDEGMGEEEDDDRGGKGGSKFASSIKKEDNESDDDSDDSKSKTATADDEGFSELDGGPDPELAHARFAELQSLYQAFLTAQKKYGRHDKKSLKQALLVSDAFTKFKLIPRQLDKLTRKMRSLLEEIRTQERNIMRLCINGAKMPRQIFIDSFPKNETSEKWLKKHILSKQSYAPALKKLQPSIVSAQDKLKDLEKSVDMSIGEIKEINRQMSAGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRIARQILQATGKEPSPEELSKKMELPEDKIRKILKIAKEPISMETPIGDDDGDSHLGDFIEDTTALSPIDAATIEGLRENVNEVLATLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRAEPLRSFLPQEQ
SIO_010081: DMP02_RS01815
subclass of: SO_0000673
so part of: DMP02_RS01815
location: complement(388298..390313)
location: region:388298-390313:-1
so has part: feature:388298-390313:-1:exon

WP_126322394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388298-390313:-1:exon

DMP02_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: folP
locus tag: DMP02_RS01820
old locus tag: RVIR1_03670
so part of: sequence
location: 390418..391749
location: region:390418-391749:1
so has part: feature:390418-391749:1:exon
subclass of: SO_0000010

position:390418:1
position: 390418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391749:1
position: 391749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390418-391749:1:exon

DMP02_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: folP
locus tag: DMP02_RS01820
old locus tag: RVIR1_03670
EC number: 2.5.1.15
inference: COORDINATES: protein motif:HMM:TIGR01496.1
GO function: GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydropteroate synthase
translation: MLILGLGSNLIDSVNNLRRAVQLLQKSHAVTVVKISPVYSSSALLPAYAPLAWDKPYLNLALRCQSSLTPTELLAAVKQVEKQLGRQESQRWAPRIIDIDILAWGDYQTNQAMLQIPHPELEKRPFALWPLLDLLPEWQHPQRDLSDLLGRWGSRFSGQAPFNTRQLPHRLLGTQLVGILNVTPDSFSDGGQFLELPEALAQAEKLVLEGAEILDIGAESTRPGAKPVSPEDEWCRLAPILSVLKDSSVRWPIKPKLSIDTRHYQVAEKALELGIDWINDVSGFADSRMGELAVKNAVKCVVMHNLGVPADKNKVLSSDPNICQQIFEWAKQRFKQLIAAGVAPEQLIFDIGIGFGKTAQQSASLLKNINYFRGLDCQLLVGHSRKSFLNLVTDKLGVERDIETALLSYQLAAHHVDYLRVHNVELNARAVNMAAQWMKESII
SIO_010081: DMP02_RS01820
subclass of: SO_0000673
so part of: DMP02_RS01820
location: 390418..391749
location: region:390418-391749:1
so has part: feature:390418-391749:1:exon

WP_126322395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390418-391749:1:exon

DMP02_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gcvPB
locus tag: DMP02_RS01825
old locus tag: RVIR1_03680
pseudo: true
so part of: sequence
location: complement(391746..393230)
location: region:391746-393230:-1
so has part: feature:391746-393230:-1:exon
subclass of: SO_0000010

position:391746:-1
position: 391746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393230:-1
position: 393230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391746-393230:-1:exon

DMP02_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gcvPB
locus tag: DMP02_RS01825
old locus tag: RVIR1_03680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011214397.1
GO function: GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO process: GO:0006546 - glycine catabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aminomethyl-transferring glycine dehydrogenase subunit GcvPB
SIO_010081: DMP02_RS01825
subclass of: SO_0000673
so part of: DMP02_RS01825
location: complement(391746..393230)
location: region:391746-393230:-1
so has part: feature:391746-393230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391746-393230:-1:exon

DMP02_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gcvPA
locus tag: DMP02_RS01830
old locus tag: RVIR1_03690
so part of: sequence
location: complement(393236..394600)
location: region:393236-394600:-1
so has part: feature:393236-394600:-1:exon
subclass of: SO_0000010

position:393236:-1
position: 393236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394600:-1
position: 394600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393236-394600:-1:exon

DMP02_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gcvPA
locus tag: DMP02_RS01830
old locus tag: RVIR1_03690
EC number: 1.4.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035375.1
GO function: GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO process: GO:0006546 - glycine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminomethyl-transferring glycine dehydrogenase subunit GcvPA
translation: MPFIPHTDVEVQEMLATIGVHSTDDLFDEIPTHLKNTELKHIPTGLNEMETARLLQERAQENKKGLCFIGAGAYEHHIPAAVWDLTSRGEFMTAYTPYQAEASQGTLQLIYEYQTMMTSLTGMDYSNASLYDGASALAEAILMAVRANKQSKSARILITKTLHPFYRQTIQSIVTQQKIELIEISYGDHGNTPLTALEPWNQQDICALVIQHPNFFGSFEAVDQLTDWAHENNSLVIAVTNPIALGLIKEPGQWGQKGADIVCGEGQPLGIPLAGGGPYFGFMCCKKEWVRQMPGRIVGRTVDKTGKTGFTLTLQAREQHIRRAKATSNICTNQGLLVTAATIYMSLLGARGLKTVAQTAHHNAQKLAKQLTQIAGVELVFHSPFFHEFVIRLSKPVNTLLNDLAKIGIQGGFDLSALYPELGNTLLVCVTETKNQAELDFYQQQLLHLLTSHS
SIO_010081: DMP02_RS01830
subclass of: SO_0000673
so part of: DMP02_RS01830
location: complement(393236..394600)
location: region:393236-394600:-1
so has part: feature:393236-394600:-1:exon

WP_126322396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393236-394600:-1:exon

DMP02_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gcvH
locus tag: DMP02_RS01835
old locus tag: RVIR1_03700
so part of: sequence
location: complement(394602..394997)
location: region:394602-394997:-1
so has part: feature:394602-394997:-1:exon
subclass of: SO_0000010

position:394602:-1
position: 394602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394997:-1
position: 394997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394602-394997:-1:exon

DMP02_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gcvH
locus tag: DMP02_RS01835
old locus tag: RVIR1_03700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010655189.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine cleavage system protein GcvH
translation: MKTPEHLKYTATHEWIQLEDKSIIARVGISDHAQDLLGDIVFVELPALAKQTKEGEEICVLESVKAAADVYSPLSGEIIEVNPRLSDTPGLVNSDPYGEGWLFRIKFSDSSELEKLLSAKNYQEQISVETH
SIO_010081: DMP02_RS01835
subclass of: SO_0000673
so part of: DMP02_RS01835
location: complement(394602..394997)
location: region:394602-394997:-1
so has part: feature:394602-394997:-1:exon

WP_126322397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394602-394997:-1:exon

DMP02_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gcvT
locus tag: DMP02_RS01840
old locus tag: RVIR1_03710
so part of: sequence
location: complement(395030..396115)
location: region:395030-396115:-1
so has part: feature:395030-396115:-1:exon
subclass of: SO_0000010

position:395030:-1
position: 395030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396115:-1
position: 396115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395030-396115:-1:exon

DMP02_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gcvT
locus tag: DMP02_RS01840
old locus tag: RVIR1_03710
EC number: 2.1.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035791.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO process: GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine cleavage system aminomethyltransferase GcvT
translation: MGKRTALYTQHQMAGAKLVDFAGWEMPLHYRSQIQEHHAVRQDSGLFDVSHMLAIDILGKNSLAYLSYLLANNPQKLKPGKALYSCLLNDEAGILDDLIVYQLSEQRYRIVVNAGNREQDLHWFNKQAERFSDLLIEERHDLSILAIQGPNARQKSLPAFNATQQTLIENLKPFHCVEQNNWCVARTGYTGEDGFEVMLPHHEAETFWQRLLELDIPACGLGARDTLRLEAGFNLHGSDMDISTTPLESNLAWTIGWEPSDRDFIGREALTQQRDQLQPELVGLVLEERAILRKDCILTTEKGDKGHITSASFSPSLACSIALARLPLESGDYCQVTIRDKNYRAKIIKPPFIRKGKKAFE
SIO_010081: DMP02_RS01840
subclass of: SO_0000673
so part of: DMP02_RS01840
location: complement(395030..396115)
location: region:395030-396115:-1
so has part: feature:395030-396115:-1:exon

WP_126322398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395030-396115:-1:exon

DMP02_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01845
old locus tag: RVIR1_03720
so part of: sequence
location: complement(396257..397195)
location: region:396257-397195:-1
so has part: feature:396257-397195:-1:exon
subclass of: SO_0000010

position:396257:-1
position: 396257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397195:-1
position: 397195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396257-397195:-1:exon

DMP02_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01845
old locus tag: RVIR1_03720
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MQPLFSIILTTYNRSQFLPRAIRSVLAQSFTNFELIIIDDCSTDNTPQVVAEFTDSRITTIRQTHNQGVSMARNTGIALAKGEYICFLDDDDEYLPEFLREIFYFFEKKQQPFIGFIRVGIANVFTSNKLKSEKHAIKTKLWHLNQEKNLLFITKMDYVGLVYHRLCFKRAGVFNPEMSFAEDLDLVLRMLEASVAYASIPKVLLNVHIHQQTSLSRSIDIPAVINAMQYFLYTNDKFLSQQSALWLYYYTSLTGQYYRIGEKHLARKLVRSIIKKCWYYPKIWDVFRRYEFKLLKSRFVKLIKKLRHGELT
SIO_010081: DMP02_RS01845
subclass of: SO_0000673
so part of: DMP02_RS01845
location: complement(396257..397195)
location: region:396257-397195:-1
so has part: feature:396257-397195:-1:exon

WP_126322399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396257-397195:-1:exon

DMP02_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01850
old locus tag: RVIR1_03730
so part of: sequence
location: complement(397198..398085)
location: region:397198-398085:-1
so has part: feature:397198-398085:-1:exon
subclass of: SO_0000010

position:397198:-1
position: 397198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398085:-1
position: 398085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397198-398085:-1:exon

DMP02_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01850
old locus tag: RVIR1_03730
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MVPLFSIILTTYNRSQLLPRALRSVLQQSFSNFELIIVDDHSTDNTRQVVYEFTDNRMTYIQQDHNQGVSTARNTGIKQAKGEYLCFLDDDDEYLPTFLQEVSQFLKKKSQAFIGLIWTGIAKIHEEKTIQTELFNLDNKKNLLFLLEILFSGITIHHTCFERVGLFNPTLHLREDMDIVYRMLATGLDYAAIPKVLIKIHIHEQPSLSRSITLADRIANSEYLLVAHAAFLNQNLPLWLRWHTNLVSDYYRVGKKQQARKLVCLIIKKCWYYPRIWELSLRLELKSLKSNLLKT
SIO_010081: DMP02_RS01850
subclass of: SO_0000673
so part of: DMP02_RS01850
location: complement(397198..398085)
location: region:397198-398085:-1
so has part: feature:397198-398085:-1:exon

WP_126322400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397198-398085:-1:exon

DMP02_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01855
old locus tag: RVIR1_03740
so part of: sequence
location: complement(398088..398954)
location: region:398088-398954:-1
so has part: feature:398088-398954:-1:exon
subclass of: SO_0000010

position:398088:-1
position: 398088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398954:-1
position: 398954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398088-398954:-1:exon

DMP02_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01855
old locus tag: RVIR1_03740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035004.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MMKKSRLGRNLDMLLSSQPFDDLVQTSTVAKEELRYLAIEKLQAGRYQPRREFAKEALEELSNSIRTQGIINPIVIRAIEKDRYEIIAGERRWRAAQLAQLTEVPVLIKTISDETALAISLIENIQRQDLNPLEEAEGIQRLINEFSMTHQQVAETLGRSRTAITNLLRLLSLAPAVKLLLQQGQLEMGHARALLSLDPALQTQAAEKVVKNKLSVRETERWVQNGSFLEQTHEIPLKINADVALLERNLSDKLGAKVFFKQGLQGKGQLIIHYNSLEELDGILAHIN
SIO_010081: DMP02_RS01855
subclass of: SO_0000673
so part of: DMP02_RS01855
location: complement(398088..398954)
location: region:398088-398954:-1
so has part: feature:398088-398954:-1:exon

WP_126322401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398088-398954:-1:exon

DMP02_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01860
old locus tag: RVIR1_03750
so part of: sequence
location: complement(398951..399817)
location: region:398951-399817:-1
so has part: feature:398951-399817:-1:exon
subclass of: SO_0000010

position:398951:-1
position: 398951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399817:-1
position: 399817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398951-399817:-1:exon

DMP02_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01860
old locus tag: RVIR1_03750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006036012.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MGKIIAIVNQKGGVGKTTSCINLAASMALLKQKTLLIDLDPQANATTGSLFQKEATTANIAQVLLDEVPVEESLIETPAHYTLIPGSGDLTQTEIQLLQKEQREYTLKKILAPLIASYDYILLDCPPSLNILTVNALVAANSVIIPVQCEYFALEGLSSLMNTLQSIRTTVNPALQIHGILRTLFDSRNSLAKQVAEELFIHFKDKLYTTTIPRNIRLAEAPSHGQPALLYDPHSSGSQAYISLAKEILVRDGQDASTFVESAPLTTPNTLLKKRSKHEKSPSVEQVV
SIO_010081: DMP02_RS01860
subclass of: SO_0000673
so part of: DMP02_RS01860
location: complement(398951..399817)
location: region:398951-399817:-1
so has part: feature:398951-399817:-1:exon

WP_126322402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398951-399817:-1:exon

DMP02_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01865
old locus tag: RVIR1_03760
so part of: sequence
location: 399890..400861
location: region:399890-400861:1
so has part: feature:399890-400861:1:exon
subclass of: SO_0000010

position:399890:1
position: 399890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400861:1
position: 400861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399890-400861:1:exon

DMP02_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01865
old locus tag: RVIR1_03760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035370.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ABC transporter substrate-binding protein
translation: MKLLTHRLLFLLLRARQARGNPEICPGWPRLLRKLAMTAILFLLGILFYQSSIAAPIHIVAAENFYASVAKEIGGSYVSVESIMSQPDQDPHLFNVTPRIAKSLGRADLVVFNGLGYDAWMQGLLSVAAVAVQAKICVGQLVNKKEGDNPHIWYDPATMPLYAKALLDFLVQKDPVHQVAYQANYQAFIKRYQRLSDLIQQLKSQSQQVKVIATEPVFGYMANALGFDMQGMAFQTSMMNGVDPSPQQVLEFQNALQTRRVKVLFYNKQVSSPLIQQLLKVAKRNAIPVIGITETQPANTTYSGWMSDQLHQLAKALHEHASI
SIO_010081: DMP02_RS01865
subclass of: SO_0000673
so part of: DMP02_RS01865
location: 399890..400861
location: region:399890-400861:1
so has part: feature:399890-400861:1:exon

WP_232019589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399890-400861:1:exon

DMP02_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01870
old locus tag: RVIR1_03770
so part of: sequence
location: 400842..401654
location: region:400842-401654:1
so has part: feature:400842-401654:1:exon
subclass of: SO_0000010

position:400842:1
position: 400842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401654:1
position: 401654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400842-401654:1:exon

DMP02_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01870
old locus tag: RVIR1_03770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034750.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MNTLAFKQLGLAYGKRSIFSDFTATIKQGEFIAILGANGAGKSTLLRSILGLVPIKQGQISVFQQPVQKGSALIGYMPQVRQNLVNRSLSAKTWLAANLNGFKWGLPILSQQQKHELSRVVHLVQAEKLMHRSYALLSGGERQRLLLAQALLNKPKILLLDEPLMNLDPYYQENLVALINTIRVELGITVLFTSHDINPLLNCVDRVLYLAKGKAAIGLVNEIITSEKLSELYDKEIHVIRYEQQLFVINKDTGYHHVSHCRPDLDHFSV
SIO_010081: DMP02_RS01870
subclass of: SO_0000673
so part of: DMP02_RS01870
location: 400842..401654
location: region:400842-401654:1
so has part: feature:400842-401654:1:exon

WP_126322403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400842-401654:1:exon

DMP02_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01875
old locus tag: RVIR1_03780
so part of: sequence
location: 401611..402429
location: region:401611-402429:1
so has part: feature:401611-402429:1:exon
subclass of: SO_0000010

position:401611:1
position: 401611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402429:1
position: 402429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401611-402429:1:exon

DMP02_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01875
old locus tag: RVIR1_03780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035618.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MSVTAGPILIISLFEYDFLRNALLAGTVAAILAGVVGYFMVIRRLAFAGHALGHIGFAGATGAGLLGLSPLTGQLLLTVLAAVGMGGLGHRIAKSDVAIGIILAFALGLGVLFLHFYMNYAAQAMTILFGNLLGVSAHLIKIMACCCMVSLIALSVMARPLLFSSLEPELAEAKGVSLSCISILFMIIAAIAVTIASQVVGILLVFTLLIGPAAAALNWTHGFASGLLLTVFLGILSVWLGIVLAFISDWPIPFWISTLTAVIYFLSVIKKS
SIO_010081: DMP02_RS01875
subclass of: SO_0000673
so part of: DMP02_RS01875
location: 401611..402429
location: region:401611-402429:1
so has part: feature:401611-402429:1:exon

WP_126322404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401611-402429:1:exon

DMP02_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01880
old locus tag: RVIR1_03790
so part of: sequence
location: complement(402469..403098)
location: region:402469-403098:-1
so has part: feature:402469-403098:-1:exon
subclass of: SO_0000010

position:402469:-1
position: 402469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403098:-1
position: 403098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402469-403098:-1:exon

DMP02_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01880
old locus tag: RVIR1_03790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTETSKEMLSPKEIEKLAFLLKKDVRELEEMRLEAVKQELLNQKQLTKEEGDLCEIDSLITKLTTFDERDWKISFESERNPEKIYSSIIVDDDNNCPMLLELNGDKAQQQDTLSKLVNAYREITGKDPQTKTYKNAEELPEELKPLLANKPFPLTVMVLSLDNLEQFNKFNKIINSLADEGKIKITDITPQNAPEAQEENANRPTFRP
SIO_010081: DMP02_RS01880
subclass of: SO_0000673
so part of: DMP02_RS01880
location: complement(402469..403098)
location: region:402469-403098:-1
so has part: feature:402469-403098:-1:exon

WP_126322405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402469-403098:-1:exon

DMP02_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01885
old locus tag: RVIR1_03800
so part of: sequence
location: complement(403291..404382)
location: region:403291-404382:-1
so has part: feature:403291-404382:-1:exon
subclass of: SO_0000010

position:403291:-1
position: 403291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404382:-1
position: 404382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403291-404382:-1:exon

DMP02_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01885
old locus tag: RVIR1_03800
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034783.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MTNPILSTSSETAGFTGLETIEMGAARIQVDDKKIINCRADLNQLVPFKYKWAWEKYLAACANHWMPQEINMSADIALWRSPNSLTEDERMIIERSLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEALHTHAYQYVIESLGMDEARLFNMYRELPTVAKKAEWALPFTQSLGDPHFRTGTPENDQRLLRDLIAFYVVFEGIFFYVGFSQILSMGRRNKMTGTAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTPEFKQYVINLVKEGVELEYQYALDTMPRGILGLNANMMWDYLRFIGNRRLAQIGLPEQYPGITNPLPWMSEIIDLKKEKNFFETRVTEYQTGGSLNWD
SIO_010081: DMP02_RS01885
subclass of: SO_0000673
so part of: DMP02_RS01885
location: complement(403291..404382)
location: region:403291-404382:-1
so has part: feature:403291-404382:-1:exon

WP_126322406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403291-404382:-1:exon

DMP02_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01890
old locus tag: RVIR1_03810
so part of: sequence
location: complement(404426..407317)
location: region:404426-407317:-1
so has part: feature:404426-407317:-1:exon
subclass of: SO_0000010

position:404426:-1
position: 404426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407317:-1
position: 407317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404426-407317:-1:exon

DMP02_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01890
old locus tag: RVIR1_03810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014844148.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside-diphosphate reductase subunit alpha
translation: MTSTILPNANKSITPCIDKKPEHMLVNDLNESITPCIDKEPERIPVNGLQVIKRNGKPVSYDPNKIRVAISKAFLAVEGGQAATSSRIHERVTQLTGQITQILQGRLPQGGTLPIETIQDQVELVLMRAEAHQVARAYVLYREERRKMREHTASQPDIQLQITLSDGSKRPLNMEQLSKLIIETCHGLTELNPGLILQETLRNLYDGMPLAEIDKALIMSARSLVEQDPNYTYATARFLLRTLYAEALSFLGIERKIGSDTLHDLYRHYFQHYLEQGIALELLDPELKTYDIQKLTAALLPQRDEQFTYLGLQTLYDRYFLHANEIRFELPQAFFMRVAMGLAIKETNKEERAIEFYKLLSSFDYMASTPTLFNSGTLRPQLSSCFLTTVADDLDQIYSAIKDNALLSKFAGGLGNDWTSVRAMGARIKGTNGKSLGVVPFLNVANASAVAVNQGGKRKGAVCAYLETWHLDVEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVMQEEDWTLFSPDETPDLHDLYGLAFEERYAAYEAKAARGEIKNFKKLSAINLWRKMLSLLFETGHPWITFKDPCNLRSPQQHVGIIHSSNLCTEITLNTSVDEIAVCNLGSINLPQHLNDAGELDQNKLRATIRTAIRMLDNVIDINYYTVPQARRSNLKHRPIGLGLMGFQDALYQLRVPYASEKAIAFADYSMEMISYYAIEASSDLAKERGSYESFPGSLWSQGILPIDSITRLQETRGEWFNQNQTSTLDWAPLRQKVMQNGMRNSNCMAIAPTATISNICGVSQSIEPTYQNIFVKSNMSGEFTVINPYLIKDLKSLGLWDAVMLNDIKYYDGSLQKIDRIPDTLKQLYATAFEVPVHWLVEAGSRRQKWIDQSQSLNLYMAEPSGKKLDELYKLIWLKGLKTSYYLRTLGATHMEKATLERGHLNAVQSLAEPLSGPSCSILDPDCESCQ
SIO_010081: DMP02_RS01890
subclass of: SO_0000673
so part of: DMP02_RS01890
location: complement(404426..407317)
location: region:404426-407317:-1
so has part: feature:404426-407317:-1:exon

WP_232019590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404426-407317:-1:exon

DMP02_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01895
old locus tag: RVIR1_03820
so part of: sequence
location: 408007..409398
location: region:408007-409398:1
so has part: feature:408007-409398:1:exon
subclass of: SO_0000010

position:408007:1
position: 408007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409398:1
position: 409398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408007-409398:1:exon

DMP02_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01895
old locus tag: RVIR1_03820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase/phosphoglucomutase
translation: MSVVPLKNISESIFRAYDIRGIVDEAITPEVILLLGRAIGSAAQEQGEKTIITARDGRLSGPVLIKALHQGLRESGCNVIHIGQVPSPVLYFATRTLSTHSGVMLTASHNPANYNGLKIVLAGKSLSEETIAALYTRIQNGSFKSGSGGYKEISILEDYMNRIVGDIKLKRSLRVVVDCGSGIAGVVAPELLRRLGCEVIELFCEVDGRFPHHHPDPSVPENLTDLIQAVAQHKADLGLALDGDGDRLGVVTNKGEIIWPDRQLMLYASDVLSRNPGALIIYDIKSTRNLVDVIKQQGGRSLMWKTGHSIVKAKLEESGALLAGEMSGHIFFKERWYGFDDGLYTAARLLEIIAKGNQSSSEVFVALPNSINTPELKLAITEDKKFAFMQAFQKEVEFPNASMSKIDGVRAEFSDGWGLVRASNTSPYLILRFEADSKEALQRIQALFAEALLARDPTFKLPF
SIO_010081: DMP02_RS01895
subclass of: SO_0000673
so part of: DMP02_RS01895
location: 408007..409398
location: region:408007-409398:1
so has part: feature:408007-409398:1:exon

WP_126322407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408007-409398:1:exon

DMP02_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01900
old locus tag: RVIR1_03830
so part of: sequence
location: 409549..410319
location: region:409549-410319:1
so has part: feature:409549-410319:1:exon
subclass of: SO_0000010

position:409549:1
position: 409549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410319:1
position: 410319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409549-410319:1:exon

DMP02_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01900
old locus tag: RVIR1_03830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006388246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MRVITLNLNGIRSAAKKGFFDWMQTQKADVICLQETRAQEHQAREAVQLPGYYAYFFDAEKKGYSGVAIYSRKKPDKVITGLGWDLADKEGRYIQLDFPHLSVASLYMPSGTSGEIRQAMKFQFLSAYEKILKKQRKQKREYIICGDWNIAHKTIDLKNWRANQKHSGFLPEERAWLDQVLGPLGYVDAFRELNQLPDQYTWWSNRGRAWEKNVGWRIDYQIVSPGLKNKIKTVQIYKEQRFSDHAPLQIDYDLPY
SIO_010081: DMP02_RS01900
subclass of: SO_0000673
so part of: DMP02_RS01900
location: 409549..410319
location: region:409549-410319:1
so has part: feature:409549-410319:1:exon

WP_126322408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409549-410319:1:exon

DMP02_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01905
old locus tag: RVIR1_03840
so part of: sequence
location: complement(410240..411646)
location: region:410240-411646:-1
so has part: feature:410240-411646:-1:exon
subclass of: SO_0000010

position:410240:-1
position: 410240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411646:-1
position: 411646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410240-411646:-1:exon

DMP02_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01905
old locus tag: RVIR1_03840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFADTHHYKKTQPFNYKGETYWPISPFGDGNCGLYAFACGLIDSTISNELILEKEKFDEFRNIVVAFLYLASNNISEFKHELETQLYKFIRLICQSNLTFSKFKNSLIEHLLTREDLAAINLILGQGLRYIGVKSYKEICARQLGIQENLFKEDIQLFKTGEWIGQEILSPLAKHFGVQLKLISKNPNTDQYYHHESLAQSLPEKTPPLKKMPVVTLLFENGHWHWLISSKKKLGLTTILPSITKQPRIARELLHSNKKLTPPVKNDKQKSFDIKDKKNPSERTRRTSRELLHLNGELMQTVKSDKQKPFAFAKTTLDSLASRLKQVFDFLVTLKDIFNAAPNQTEELKKAKEQAKTVAQDSTQIINSWREKCGTSDQLDKQLNKLRLRDFEKSLLKTPLIMDNSEEDAMAAILQNAEIVDFLSRNHATLKTHMTPIPTNKPNMADHNQSVTAHDLRSVAPCISVQS
SIO_010081: DMP02_RS01905
subclass of: SO_0000673
so part of: DMP02_RS01905
location: complement(410240..411646)
location: region:410240-411646:-1
so has part: feature:410240-411646:-1:exon

WP_126322409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410240-411646:-1:exon

DMP02_RS07325
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07325
so part of: sequence
location: complement(411706..411822)
location: region:411706-411822:-1
so has part: feature:411706-411822:-1:exon
subclass of: SO_0000010

position:411706:-1
position: 411706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411822:-1
position: 411822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411706-411822:-1:exon

DMP02_RS07325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07325
inference: COORDINATES: protein motif:HMM:NF014517.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSESCEQHFEGDRLIIRYAAVEFSLKKLIIFIQKNLKT
SIO_010081: DMP02_RS07325
subclass of: SO_0000673
so part of: DMP02_RS07325
location: complement(411706..411822)
location: region:411706-411822:-1
so has part: feature:411706-411822:-1:exon

WP_232019591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411706-411822:-1:exon

DMP02_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01910
old locus tag: RVIR1_03850
so part of: sequence
location: complement(411819..412211)
location: region:411819-412211:-1
so has part: feature:411819-412211:-1:exon
subclass of: SO_0000010

position:411819:-1
position: 411819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412211:-1
position: 412211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411819-412211:-1:exon

DMP02_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01910
old locus tag: RVIR1_03850
inference: COORDINATES: protein motif:HMM:NF014517.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CinA family protein
translation: MPPTSQVHALSEQLGKLLKQHHLKLATAESCTGGQLAQTITAIPGSSAWFERGFISYSNLSKQELLGVSEKILNHYGAVSQETAEEMAKGVLKKSPADISLAITGIAGPDGGTKKIQWVAYASLGPTKTL
SIO_010081: DMP02_RS01910
subclass of: SO_0000673
so part of: DMP02_RS01910
location: complement(411819..412211)
location: region:411819-412211:-1
so has part: feature:411819-412211:-1:exon

WP_232019592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411819-412211:-1:exon

DMP02_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: infA
locus tag: DMP02_RS01915
old locus tag: RVIR1_03860
so part of: sequence
location: 412334..412585
location: region:412334-412585:1
so has part: feature:412334-412585:1:exon
subclass of: SO_0000010

position:412334:1
position: 412334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412585:1
position: 412585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412334-412585:1:exon

DMP02_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: infA
locus tag: DMP02_RS01915
old locus tag: RVIR1_03860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035963.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MAKEDQIVMEGTVIETLPNTLFRVQLENGHVINAHISGRMRKSYIRVLTGDKVKVEMTPYDLSKGRIIFRGKGSDMDKSKPVQ
SIO_010081: DMP02_RS01915
subclass of: SO_0000673
so part of: DMP02_RS01915
location: 412334..412585
location: region:412334-412585:1
so has part: feature:412334-412585:1:exon

WP_126322410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412334-412585:1:exon

DMP02_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: clpA
locus tag: DMP02_RS01920
old locus tag: RVIR1_03870
so part of: sequence
location: complement(412569..414884)
location: region:412569-414884:-1
so has part: feature:412569-414884:-1:exon
subclass of: SO_0000010

position:412569:-1
position: 412569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414884:-1
position: 414884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412569-414884:-1:exon

DMP02_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: clpA
locus tag: DMP02_RS01920
old locus tag: RVIR1_03870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035026.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpA
translation: MFSKELEMSLNSIFKQAREKRYEYLTVEHLLLALLEEPSATAALKACGANLNRLKNELNNFIAATTPLFPATDANLDIQPTLGFQRVLQRAIFQVQSSGKTEVNGVNILAAIFGEQDSQAIYFLRRENVTRSDLSNYISQGLPKLQENTDAKLSQFVTEEEVTIEGPGNSPLELYAINLNSKARQGKIDPLIGRKEELARVIQILCRRRKNNPLLVGEAGVGKTAIVEGLAQAIVKKEVPAVLAHSTIYSLDLGSLLAGTKYRGDFEKRFKALLAQLKQEPQSVLFIDEIHVVIGAGAASGGVMDASNLIKPLLTTGELKCIGATTYQEYRSIFEKDRALARRFQKIDVPEPNVEETLAILRGLRERLEAHHQVKYRMNALRASVELAARYLPDRFLPDKAIDIVDEAGAYQALRPAHKKKPFIGIHEIEAIVAKMVRIPTRNVSASDKNRLRHLEEKLKHRVFGQSLAIENLCAAMKLTRSGLRETNKTIASFLFAGPTGVGKTEITRQLAELMGIELLRFDMSEYMERHSVSRLIGAPPGYVGYDQGGLLTEAVTKHPHAVLLLDEIEKAHPDIFNLLLQVMDHGSLTDTNGRKTDFSHVVLVMTSNAGAEHWSRQTIGFAAESSQAGENPEAIKRVFSPEFRNRLDATIYFNYLSPEIVSQVVDKYLSELEAQLEKKHVRLCVDKAARIWLAKNGYDKAMGARPMARLIQEKIKKPIADELLFGRLVHGGQLILTSSNDDLQLIIHEKGVIAVALPPQQLSQAPIGQA
SIO_010081: DMP02_RS01920
subclass of: SO_0000673
so part of: DMP02_RS01920
location: complement(412569..414884)
location: region:412569-414884:-1
so has part: feature:412569-414884:-1:exon

WP_126322411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412569-414884:-1:exon

DMP02_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: icd
locus tag: DMP02_RS01925
old locus tag: RVIR1_03880
so part of: sequence
location: complement(415151..416437)
location: region:415151-416437:-1
so has part: feature:415151-416437:-1:exon
subclass of: SO_0000010

position:415151:-1
position: 415151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416437:-1
position: 416437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415151-416437:-1:exon

DMP02_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: icd
locus tag: DMP02_RS01925
old locus tag: RVIR1_03880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019349603.1
GO function: GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent isocitrate dehydrogenase
translation: MAYQHIKIPNQGEKISVNSDFSLNVPDQPIIPFIEGDGIGIDITPVMKNVVDAAVEKAYGDERRIAWMEVYAGEKSTRVYGKDSWLPEETLSALQEYVVSIKGPLTTPVGGGIRSLNVALRQQLDLYVCLRPVRYFKGVPSPMREPEKNNMVIFRENSEDIYAGIEWEADSPEAKKIIQFLRNEMNVKKIRFPEHCGIGVKPVSREGTQRLVKRAIQYAIQHNLPSVCLVHKGNIMKFTEGAFKDWGYAVAKEQFAAELLDGGPWMRLKNPLTGQNIIIKDFIADAFLQQILLRPDEYSVIATLNLNGDYISDALAAQVGGIGIAPGANLSDKVAMFEATHGTAPKYAGQNKVNPGSLILSAEMMLRHIGWNEAADLIITGMEGAIQAKTVTYDFARLMKDAQEVSCSVFGQSMIKHMSSKHSFASLS
SIO_010081: DMP02_RS01925
subclass of: SO_0000673
so part of: DMP02_RS01925
location: complement(415151..416437)
location: region:415151-416437:-1
so has part: feature:415151-416437:-1:exon

WP_126322412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415151-416437:-1:exon

DMP02_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01930
old locus tag: RVIR1_03890
so part of: sequence
location: 416555..417073
location: region:416555-417073:1
so has part: feature:416555-417073:1:exon
subclass of: SO_0000010

position:416555:1
position: 416555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417073:1
position: 417073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416555-417073:1:exon

DMP02_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01930
old locus tag: RVIR1_03890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKEILIFKTYTSSKKYQINPIIKMLTNNRSKQLEILSTKLDACDLKQLEEDSPIIQNEQINDFMLNLKEPKGLVILLTAFSGRRGLQEKLILILDEKKLLTGLVKGHKGQIIELLEDPIIQEIVEKKTQGGVFRTRIFCDFLTSLRSSPYNRLIDNDSHASSLQTPSKGFM
SIO_010081: DMP02_RS01930
subclass of: SO_0000673
so part of: DMP02_RS01930
location: 416555..417073
location: region:416555-417073:1
so has part: feature:416555-417073:1:exon

WP_126322413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416555-417073:1:exon

DMP02_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01935
old locus tag: RVIR1_03900
so part of: sequence
location: 417141..417776
location: region:417141-417776:1
so has part: feature:417141-417776:1:exon
subclass of: SO_0000010

position:417141:1
position: 417141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417776:1
position: 417776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417141-417776:1:exon

DMP02_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01935
old locus tag: RVIR1_03900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-2 protease family protein
translation: MGDFSLGQKIILWVIPLIFAITVHETAHGWIASKCGDPTAKLLGRLTLNPIKHIDPIGTIVVPAILFFLGGFIFGWAKPVPITWRNLKNPRRDMALVAAAGPLANLGMAFLWVAVAKLGIGLHSAPFAYMGQIGISINLVLMLLNLIPIPPLDGSRVVASLLSPAMAYRFNQLEVYGFLILVLLLASGLLARLLGPILQGLLSVFFRIFGL
SIO_010081: DMP02_RS01935
subclass of: SO_0000673
so part of: DMP02_RS01935
location: 417141..417776
location: region:417141-417776:1
so has part: feature:417141-417776:1:exon

WP_126322414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417141-417776:1:exon

DMP02_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01940
old locus tag: RVIR1_03910
so part of: sequence
location: 417794..418609
location: region:417794-418609:1
so has part: feature:417794-418609:1:exon
subclass of: SO_0000010

position:417794:1
position: 417794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418609:1
position: 418609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417794-418609:1:exon

DMP02_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01940
old locus tag: RVIR1_03910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597456.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: segregation/condensation protein A
translation: MTEDTPSTTAVSAPVATVRGQPFVQLPSDLYIPPQALEILLETFSGPLDLLLYLIKKQNFDILDIPVAEVTRQYMHYIELMQVLEIELATEYLVMAAVLTEIKSRLLLPKPVLPQSADEADPRAELIRRLQEYEQIKQAAYELDQLPRQGRDIFLAMAQAELGALPRCDDETRPPLDLEDLVAALQSVLTRAALTTHHAIAQEPLSIRERMSQILHRLSTENRVEFTGFFTPNEGRMGVVVTFIALLELWRQALIELIQTKPYAEIEVRTR
SIO_010081: DMP02_RS01940
subclass of: SO_0000673
so part of: DMP02_RS01940
location: 417794..418609
location: region:417794-418609:1
so has part: feature:417794-418609:1:exon

WP_126322415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417794-418609:1:exon

DMP02_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01945
old locus tag: RVIR1_03920
so part of: sequence
location: 418606..419358
location: region:418606-419358:1
so has part: feature:418606-419358:1:exon
subclass of: SO_0000010

position:418606:1
position: 418606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419358:1
position: 419358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418606-419358:1:exon

DMP02_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01945
old locus tag: RVIR1_03920
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MRFQDKTIIITGGSSGIGAATAQLFSQEGATVYVLDKKNLDYPRSENIVYFACDVSNLQQVKRAIETIQDKSPQIDFLFCNAGVHLFATIEESSVEAMNHVITSNLFGTIYCLQQVLPIMRKQKFGSIVLMASDQAFIAKEQCAIYGASKAAIAQLAKSTALDYATYGIRVNCVCPGTIDTPMYQRVIQQFQEKTQLSEQRIKADVAQRLPLKRVGRPEEVADVVGFLCSDTASFMTGALVNIDGGYTIQ
SIO_010081: DMP02_RS01945
subclass of: SO_0000673
so part of: DMP02_RS01945
location: 418606..419358
location: region:418606-419358:1
so has part: feature:418606-419358:1:exon

WP_126322416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418606-419358:1:exon

DMP02_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01950
old locus tag: RVIR1_03930
so part of: sequence
location: 419499..421049
location: region:419499-421049:1
so has part: feature:419499-421049:1:exon
subclass of: SO_0000010

position:419499:1
position: 419499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421049:1
position: 421049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419499-421049:1:exon

DMP02_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01950
old locus tag: RVIR1_03930
inference: COORDINATES: protein motif:HMM:NF019334.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein kinase family protein
translation: MSSIYFLNPQVDPKTPGSDLLLIELLKSMKPGDLFKKDTIFSVIFQGKPYQVALTREILCRKRQDKQGLRYEVIDNTPKGRGAFGQVSPTTTLIVHNDHIERKYKRIIKREIMRENKVDTFEQEAVIGQKVPYLHMKPVVNSSQIDKGVVSEQFLIMRHLPGKTLNELLKDKSISRLEQFEKLELSLAILRTFKKELYDKGLIHSDIKPDNIMVHFSSKGFMPDIYLIDFGFSRTEPGKNRGFNRAYGAPESIVRGGYSGKESDTFSIGKIIRKIWEADAQKVDYGVIDEVVKGMLVPNARQRTPLTTALNKMEVIYCLTKANEKQAQLISIVSSNKMFTQVLKSAVESNSVNNTLIAYLESINVGELKEKVPCMEVLIRDLKQSGTEEKTQDAHLINLKHSLREAICFYIQKTYTQSNIKNKDRIASTRRIQDINCLLDCLEGATSSADLSKQILDWEQSLERGLLGRSTLGSLVHQAVIKNIPKAKTAPFSFFRCSNLVQINEPLSHVPARFRP
SIO_010081: DMP02_RS01950
subclass of: SO_0000673
so part of: DMP02_RS01950
location: 419499..421049
location: region:419499-421049:1
so has part: feature:419499-421049:1:exon

WP_126322417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419499-421049:1:exon

DMP02_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01955
old locus tag: RVIR1_03940
so part of: sequence
location: complement(421046..421867)
location: region:421046-421867:-1
so has part: feature:421046-421867:-1:exon
subclass of: SO_0000010

position:421046:-1
position: 421046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421867:-1
position: 421867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421046-421867:-1:exon

DMP02_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01955
old locus tag: RVIR1_03940
EC number: 2.4.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035423.1
GO function: GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: purine-nucleoside phosphorylase
translation: MKNSPQVLSQLILNKRPDFKPKIAIILGSGSANLADKLQDVISIPYHSLPNFPISRVEGHPGQLLLGYLNKVPVICCQGRVHAYEGMQEKDFQLFIRILKCLGCETVLMTNATGSLRKDFQPGQLVLIADHINFHPMNPLVGINDDEFGPRFFPMDDAYDKKLRHSLQQTAEQLNISLPEGVYFSVLGPSFETPAEIRAFRILGADVVGMSTVPEVIVARHCGLKVAVISVVTNLASGLSEESITHEGTLHFAEKASHDLGRLLESAIEQLTN
SIO_010081: DMP02_RS01955
subclass of: SO_0000673
so part of: DMP02_RS01955
location: complement(421046..421867)
location: region:421046-421867:-1
so has part: feature:421046-421867:-1:exon

WP_126322418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421046-421867:-1:exon

DMP02_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01960
old locus tag: RVIR1_03950
so part of: sequence
location: complement(421874..422152)
location: region:421874-422152:-1
so has part: feature:421874-422152:-1:exon
subclass of: SO_0000010

position:421874:-1
position: 421874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422152:-1
position: 422152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421874-422152:-1:exon

DMP02_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01960
old locus tag: RVIR1_03950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019231970.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidative damage protection protein
translation: MSRTIYCIKLQTQAEGLDYPPYPGELGQRIYQSISKPAWQQWINHQTMLINEYRLSTLEPQAREFLKKEMGKFLFAEGEIKTPAGFTPPITQ
SIO_010081: DMP02_RS01960
subclass of: SO_0000673
so part of: DMP02_RS01960
location: complement(421874..422152)
location: region:421874-422152:-1
so has part: feature:421874-422152:-1:exon

WP_126322419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421874-422152:-1:exon

DMP02_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mutY
locus tag: DMP02_RS01965
old locus tag: RVIR1_03960
so part of: sequence
location: complement(422237..423346)
location: region:422237-423346:-1
so has part: feature:422237-423346:-1:exon
subclass of: SO_0000010

position:422237:-1
position: 422237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423346:-1
position: 423346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422237-423346:-1:exon

DMP02_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mutY
locus tag: DMP02_RS01965
old locus tag: RVIR1_03960
EC number: 3.2.2.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035205.1
GO function: GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A/G-specific adenine glycosylase
translation: MTHPLLPKHFQQHVLNWFNKHGRKNLPWQQKKSPYHVWLSEIMLQQTQVTTVTPYFQRFIKQFPNLSSLAAAQLDEVLNLWAGLGYYARARNLLRCAQMLEQKYAGKFPQNLIQLQTLPGIGRSTAGAILSLGFDQAAAILDGNVKRVLTRFHAIAGWPGLSAVNKKLWELAERYTPIQQTAAYTQAMMDLGALICTRTQPKCDQCPLQTHCLAYNTGNPAHFPSPKPSKKLPIRSIQMLILVNQQQEILLEKRPPTGIWGGLWSLPECPSDADAKNFSKKHYYCETEKVRQAMQMRHTFSHFHLDIQAVVMQVNKWHPPLMESDRIVWYNVQQLQKKGLAAPIKKLIQQLNNSTYTHSNGIFGKAPRK
SIO_010081: DMP02_RS01965
subclass of: SO_0000673
so part of: DMP02_RS01965
location: complement(422237..423346)
location: region:422237-423346:-1
so has part: feature:422237-423346:-1:exon

WP_126322420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422237-423346:-1:exon

DMP02_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01970
old locus tag: RVIR1_03970
so part of: sequence
location: complement(423391..425064)
location: region:423391-425064:-1
so has part: feature:423391-425064:-1:exon
subclass of: SO_0000010

position:423391:-1
position: 423391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425064:-1
position: 425064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423391-425064:-1:exon

DMP02_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01970
old locus tag: RVIR1_03970
inference: COORDINATES: protein motif:HMM:NF024893.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA family protein
translation: MSKILRVLLTLIGSCVLLALVAIIGLVVFVNPNDLKPQISQAVSKYTGCQLQLGGNIEWSLFPWLGLQLNNATLSNTPGFGDKPFAVIQKLDLQVRLLPLLHKQLEVGKLQINGLTLYLVKNATGQTNWQGPHTPASSPSSTETLPDNLKPLGVVVAGLDIQNGHVLFDDKQKNKRYEIAQLQLKSANLTLNKSSAFAVQFNLNTNAPALKANIKLNTNITLNADGKEITLNKLNLNTLLKNPAYPNGVLPISLQADAMINLNNQTFAADKFTLTVDQNKFVGHIQGQNLFKNPLLSGVIASYQLKAGQFTIQRLQSPFQFKNNILSLNPITGDLYHGNYQGNLTLDLRTATPQLVMQSQLNQINIQSLFQEFASKSQIQLVGLANLSGKFFTNGSDADSLTKNLHGKGQFSVDNGSIKGINVSYWVALGRALLKHQPSPTADSPDTPFDKFTGTFSIDKGIITNNDLNISSGRLRISGQGSLNLPQQQMNYELNAQPVLSDGSPEGIAIPIRISGPFNQLHITPILDKLSINIFKEKFKGKLQEQLNKLDLSKIFH
SIO_010081: DMP02_RS01970
subclass of: SO_0000673
so part of: DMP02_RS01970
location: complement(423391..425064)
location: region:423391-425064:-1
so has part: feature:423391-425064:-1:exon

WP_126322421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423391-425064:-1:exon

DMP02_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01975
old locus tag: RVIR1_03980
so part of: sequence
location: complement(425093..425413)
location: region:425093-425413:-1
so has part: feature:425093-425413:-1:exon
subclass of: SO_0000010

position:425093:-1
position: 425093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425413:-1
position: 425413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425093-425413:-1:exon

DMP02_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01975
old locus tag: RVIR1_03980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011997461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NGG1p interacting factor NIF3
translation: MYKIAVYIPSDSLEKVKQAMFDQGAGRFGNYDHCAWQVLGQGQFRPLAQSNPALGQKGNLERVEEYLLEMICDKAVIKPVIKALKQTHPYEEPAYTVVHLENNNID
SIO_010081: DMP02_RS01975
subclass of: SO_0000673
so part of: DMP02_RS01975
location: complement(425093..425413)
location: region:425093-425413:-1
so has part: feature:425093-425413:-1:exon

WP_126322422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425093-425413:-1:exon

DMP02_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01980
old locus tag: RVIR1_03990
so part of: sequence
location: 425452..426378
location: region:425452-426378:1
so has part: feature:425452-426378:1:exon
subclass of: SO_0000010

position:425452:1
position: 425452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426378:1
position: 426378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425452-426378:1:exon

DMP02_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01980
old locus tag: RVIR1_03990
inference: COORDINATES: protein motif:HMM:NF018731.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1338 family protein
translation: MLNQAKKLIIQQLWRNYAVDLWPVSRIQTALKAQYNEVMRWDHFALIDLPGPYTGIGPLSNLFKQLEYEVRGRDYLAEKQNDFMWLSEQCIETQPAENALPQVVVADFRREALVPEVRKIIDAYACQSKPLDIEYLSRLKKRLLSQDETAVYELLNFVTHYLRGRDWPLPTVKEFTTVKNNNELLAWVLVMGRQVNHFGWAIHLSKKFKSLSLFNQFVSQTLGIGLNANGGLIKGQIEKGIEQSSSAAIVKSIQLADGAVDLSDRFIEFVWRYPIIPMNEKPCFAKDYFSGFIANQADSVVESLYLNR
SIO_010081: DMP02_RS01980
subclass of: SO_0000673
so part of: DMP02_RS01980
location: 425452..426378
location: region:425452-426378:1
so has part: feature:425452-426378:1:exon

WP_126322423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425452-426378:1:exon

DMP02_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01985
old locus tag: RVIR1_04000
so part of: sequence
location: 426524..427192
location: region:426524-427192:1
so has part: feature:426524-427192:1:exon
subclass of: SO_0000010

position:426524:1
position: 426524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427192:1
position: 427192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426524-427192:1:exon

DMP02_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01985
old locus tag: RVIR1_04000
inference: COORDINATES: protein motif:HMM:NF017474.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF807 family protein
translation: MPEEFIKLLDISGAYLAILKLNQLFYSTNHKNNNFIKFIYNNFLRIFNFIEEKITLDAGLTFAGTGAIGAMNVSSYFGNKMAIQAVNVNKIAIGQYSVTFFSARDLKPTQPPVVNINAQDNTGTRFISQLLQPVQFTFNPNAKDFKWQLQLQIVCQKINPSLNVLILGNYPVLVAADPQLLMVSVAQMYYPSNLSERQVAGYRALITAKRNEQYRPDRDRYL
SIO_010081: DMP02_RS01985
subclass of: SO_0000673
so part of: DMP02_RS01985
location: 426524..427192
location: region:426524-427192:1
so has part: feature:426524-427192:1:exon

WP_126322424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426524-427192:1:exon

DMP02_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01990
old locus tag: RVIR1_04010
so part of: sequence
location: 427510..428085
location: region:427510-428085:1
so has part: feature:427510-428085:1:exon
subclass of: SO_0000010

position:427510:1
position: 427510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428085:1
position: 428085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427510-428085:1:exon

DMP02_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01990
old locus tag: RVIR1_04010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035533.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-canonical purine NTP pyrophosphatase
translation: MKNEIYYVTGNAGKFEEVSEFFQKKCPELTIKQYALDIDEIQSLDQKAVVRDKVKKAYAALNKPLLLDDGGIFFEAYHQFPGTLSKFVFQGLGFKGLFKLVEEDNRAAFILQLAYTDGKQIQLFEGSCKGTVVIPEDLSSHPQLPFTAIFKPNGSDKTLAELRYTPDFFHYSFRQQALKKFVEWYIVKDTV
SIO_010081: DMP02_RS01990
subclass of: SO_0000673
so part of: DMP02_RS01990
location: 427510..428085
location: region:427510-428085:1
so has part: feature:427510-428085:1:exon

WP_126322425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427510-428085:1:exon

DMP02_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS01995
old locus tag: RVIR1_04030
so part of: sequence
location: 428192..429505
location: region:428192-429505:1
so has part: feature:428192-429505:1:exon
subclass of: SO_0000010

position:428192:1
position: 428192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429505:1
position: 429505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428192-429505:1:exon

DMP02_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS01995
old locus tag: RVIR1_04030
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MIHEDCELSGNAAKNSSAKSIQKRVILSASIGTVLEWYDFAIYAFLAAVFAKLFFQNLAPTVALMFSYGVFAIGYIARPIGAMLFGHLGDTQGRQKSLSITLLLMAAATFGIGLLPSYETVGIVAPILLVILRLLQGIAIGGESFGSVCFTIESIPPKRTGFYSALVWSSSSTGMLLASVVVFITFVLFKGNSLYTFGWRLPFLLAALGGVIGSYVRYKTSETPVFQCLVRDSLVAKFPLKTIFLSHKSLVAQLFGLYLLSALITYIAFIFMPVYFSDVLGHSRVSANTVNTVMLVSVVVLFVFSGFLSDKIGRKPIMLTAACGFAILSYPLYCFISHGNIVELIIAQSVFTLLSAGFQGPLMALTIDLIPVNIRYSLGSLSYNLAYSIFGGTVPLVAMFLITKTHNVAMPGLYLAAGAAVAILSLLFSKVNLPNSV
SIO_010081: DMP02_RS01995
subclass of: SO_0000673
so part of: DMP02_RS01995
location: 428192..429505
location: region:428192-429505:1
so has part: feature:428192-429505:1:exon

WP_126322426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428192-429505:1:exon

DMP02_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: miaA
locus tag: DMP02_RS02000
old locus tag: RVIR1_04040
so part of: sequence
location: complement(429483..430415)
location: region:429483-430415:-1
so has part: feature:429483-430415:-1:exon
subclass of: SO_0000010

position:429483:-1
position: 429483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430415:-1
position: 430415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429483-430415:-1:exon

DMP02_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: miaA
locus tag: DMP02_RS02000
old locus tag: RVIR1_04040
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010652458.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MDAKLVICLMGPTASGKTNLAIEFTQQFPAEIISVDSAMIYREMDIGTAKPTPEILKKAPHRLIDIRDPSQSYSAGEFREDALDAIEDILEKKRIPLLVGGTMLYFHVLQQGIASLPKANPEIRQQLQQALEKQGPQKLHAELQRIDPIAAQRIHPNDPQRLLRALEVAAITGRTLTEIQSTQSLAPLPYQFLNIALIPPDRSHHHRLIAERFQDMLQQGFVEEVEKLFKRGDLNADLPSIRTVGYRQIWHYLEGNLAYAAMQERAIIATRQLAKRQMTWLRSWKNLHSLNSEDKDINNKLVALIQNSAN
SIO_010081: DMP02_RS02000
subclass of: SO_0000673
so part of: DMP02_RS02000
location: complement(429483..430415)
location: region:429483-430415:-1
so has part: feature:429483-430415:-1:exon

WP_232019594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429483-430415:-1:exon

DMP02_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mutL
locus tag: DMP02_RS02005
old locus tag: RVIR1_04050
so part of: sequence
location: complement(430405..432261)
location: region:430405-432261:-1
so has part: feature:430405-432261:-1:exon
subclass of: SO_0000010

position:430405:-1
position: 430405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432261:-1
position: 432261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430405-432261:-1:exon

DMP02_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mutL
locus tag: DMP02_RS02005
old locus tag: RVIR1_04050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035021.1
GO component: GO:0032300 - mismatch repair complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MSTRIARLSPQLANQIAAGEVIERPASIIKELVENSLDANAKQIDIDVEKGGIQRIRIRDDGSGIHKDDLILALDRHATSKIRDLDDLMQIKTLGFRGEALASISSVSRLYLSSSTNTSQQGWQVTADYQNKPKLIPVSHPQGTTVDVHELFFNTPARRKFLRKEQTEFSHIEELVKRLSLSHFSMGFTLQHNKRLIHQLRPATSQSLQEERIAALCSRTFIENAIYMDMENATLRLWGWISLPTFSRSQTDLQYFYVNNRIVKDRLINHAIKQAYQDVLYQGRHAAFVLFLEIEPQFVDVNAHPAKYEVRFRENRAVYDFVKHCLQKSLAATSPVSAELSTDSVQQTTDQPRNESMFKHINSYNNINQQTIFPLHTELSPSFSSNVLTITPSVIKEEPEHCFATTPISNTPIQATEQIEQFEKAPPLGFALAQLHGIYILAQNTEGLIIVDIHAAHERILYERLKQAIENTVVNSQALLLPISLHLSSKEAEILQEYLALFTQFGFEIENLAAETIIVRKIPSLLAHIDSQQFIHDVLSDLHENENSQRFSEKINELLSSIACHSAVRANRNMNLSEMNQLLRDMEKTARSNQCNHGRPTWKQLSLSEIDRLFLRGR
SIO_010081: DMP02_RS02005
subclass of: SO_0000673
so part of: DMP02_RS02005
location: complement(430405..432261)
location: region:430405-432261:-1
so has part: feature:430405-432261:-1:exon

WP_126322428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430405-432261:-1:exon

DMP02_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02010
old locus tag: RVIR1_04070
so part of: sequence
location: complement(432751..432996)
location: region:432751-432996:-1
so has part: feature:432751-432996:-1:exon
subclass of: SO_0000010

position:432751:-1
position: 432751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432996:-1
position: 432996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432751-432996:-1:exon

DMP02_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02010
old locus tag: RVIR1_04070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNKKKIPALRLDLTKIELPTSTTQSVISPSKELELCRVKKDFEPPVSSIRFTNKTILSNHYVLISEKPITPGAHASVQQE
SIO_010081: DMP02_RS02010
subclass of: SO_0000673
so part of: DMP02_RS02010
location: complement(432751..432996)
location: region:432751-432996:-1
so has part: feature:432751-432996:-1:exon

WP_126322429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432751-432996:-1:exon

DMP02_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02015
old locus tag: RVIR1_04080
so part of: sequence
location: complement(433087..434130)
location: region:433087-434130:-1
so has part: feature:433087-434130:-1:exon
subclass of: SO_0000010

position:433087:-1
position: 433087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434130:-1
position: 434130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433087-434130:-1:exon

DMP02_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02015
old locus tag: RVIR1_04080
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional glycosyltransferase family 2/GtrA family protein
translation: MLTDLYPTLLIPAYQPNKKLIQLVKTLRKLRPTQRIIVVDDGSDIKKSHIFSKLSEFNIELLRHRENQGKGQALKTGFKHWLETSASTASGIVTADADGQHLPRDILHIADVFMQNPSSLYLGVRQFNDASTPWRSRFGNKITKFVLRLFTNIPLQDTQTGLRAIPRKLMKALLHSKTSGYDFELEMLLAAKEKQISIQQTPISTVYLDSNSASHFNPLLDSIKIYFVFIRFAAISLLSAAIDFIVFSFIYWIKKNIFLAVLLGRILSATFNFKLNHHLAFKSQNKLLPAAIKYACLASFLGLIAYSLITFIHSFGINVYSSKIIAEIALFILSFSIQRLFIFNKTN
SIO_010081: DMP02_RS02015
subclass of: SO_0000673
so part of: DMP02_RS02015
location: complement(433087..434130)
location: region:433087-434130:-1
so has part: feature:433087-434130:-1:exon

WP_126322430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433087-434130:-1:exon

DMP02_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: tsaE
locus tag: DMP02_RS02020
old locus tag: RVIR1_04090
so part of: sequence
location: complement(434324..434794)
location: region:434324-434794:-1
so has part: feature:434324-434794:-1:exon
subclass of: SO_0000010

position:434324:-1
position: 434324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434794:-1
position: 434794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434324-434794:-1:exon

DMP02_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: tsaE
locus tag: DMP02_RS02020
old locus tag: RVIR1_04090
inference: COORDINATES: protein motif:HMM:TIGR00150.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
translation: MSEYLINHEQETQQLAEKLAAHCPKNKRLIIFLKGELGAGKTTFTRFFLRALGHHAAVKSPTYTLIESYELAKQLIFHLDLYRLQTAREILEMGLYDEFDQLAIWLIEWPERAQSFLPPADILLTLSLLDSQRIARLLPQTPLGEQILKKMETSEH
SIO_010081: DMP02_RS02020
subclass of: SO_0000673
so part of: DMP02_RS02020
location: complement(434324..434794)
location: region:434324-434794:-1
so has part: feature:434324-434794:-1:exon

WP_126322431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434324-434794:-1:exon

DMP02_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ettA
locus tag: DMP02_RS02025
old locus tag: RVIR1_04100
so part of: sequence
location: complement(434808..436487)
location: region:434808-436487:-1
so has part: feature:434808-436487:-1:exon
subclass of: SO_0000010

position:434808:-1
position: 434808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436487:-1
position: 436487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434808-436487:-1:exon

DMP02_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ettA
locus tag: DMP02_RS02025
old locus tag: RVIR1_04100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035809.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0045900 - negative regulation of translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-dependent translational throttle protein EttA
translation: MSQQYIYTMQAVGKIVPPKREILKDIWLSFLPGAKIGVLGLNGSGKSSLLRIMAGVDKDFIGEARVLPGIKVGYLPQEPQLNPDKDVRGNVEEAIADSKKLLDRFNEISMKFAEPLSETEMNKLFEEQGELQTKIDAQGAWELERKLSIAADALRLPPWDADVTQLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVAWLERYLHDYPGTVVAVTHDRYFLDNVAGWILELDRGQGIPYQGNYSAWLEQKQKRLAQEEKQQSAHEKALKTELEWVRSNAKGRQAKSKARLARYEELSSQEFQKRAETQSLYIPPGPRLGDLVLEFEQLSKGFNGRLLINNLSFQVPKGAIVGIIGPNGAGKSTLFKLIMQQEQADSGRIRQGETVQLAYIDQSRDALNPDQTVWQEISDGQDIMTINQFQMPSRAYVGRFNFKGTEQQKLVKHLSGGERNRVHLAKLLRTGCNVLLLDEPTNDLDVETLRALEEALLSFPGCALVISHDRWFLDKIATHILAFEDDSTVTYFTGNYTDYEADRLKRLGTEGNQSEKRIKYRKLEH
SIO_010081: DMP02_RS02025
subclass of: SO_0000673
so part of: DMP02_RS02025
location: complement(434808..436487)
location: region:434808-436487:-1
so has part: feature:434808-436487:-1:exon

WP_126322432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434808-436487:-1:exon

DMP02_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02030
old locus tag: RVIR1_04110
so part of: sequence
location: 436700..438037
location: region:436700-438037:1
so has part: feature:436700-438037:1:exon
subclass of: SO_0000010

position:436700:1
position: 436700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438037:1
position: 438037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436700-438037:1:exon

DMP02_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02030
old locus tag: RVIR1_04110
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006036015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MVYSTQETIADFDKDLWQAMQHEAGRQEDHLELIASENYTSPCVLQAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVKKLFKADYANVQPHSGSQANAAAFMALLEPGDRLLGMSLADGGHLTHGSTVSFSGKIYQATAYGVDSKTQLIDYDEVEKLAKEHKPKLIIAGFSAYSRVVDWQRFRDIADEVGAYFMVDMAHVAGLIAAGLYPSPVPIADVVTSTTHKTLRGPRGGLILAKANPEIEKKLNSAVFPGLQGGPLMHVIAGKAVAFEEALQADFKDYQKQVMLNAKAMAETMAEKGYKIVSGGTDNHLFLVDLTDKNITGKAAENVLEAAYMTINKNAVPNDPRSPFVTSGIRLGTPALTTRGMKEQEMQQVAAWVCMVLDRLKDSAELESDAQNQLIGSLKESVEIKKIKQEVIALCRRFPVYSRMESANFVA
SIO_010081: DMP02_RS02030
subclass of: SO_0000673
so part of: DMP02_RS02030
location: 436700..438037
location: region:436700-438037:1
so has part: feature:436700-438037:1:exon

WP_126322433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436700-438037:1:exon

DMP02_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: nrdR
locus tag: DMP02_RS02035
old locus tag: RVIR1_04120
so part of: sequence
location: 438093..438593
location: region:438093-438593:1
so has part: feature:438093-438593:1:exon
subclass of: SO_0000010

position:438093:1
position: 438093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438593:1
position: 438593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438093-438593:1:exon

DMP02_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: nrdR
locus tag: DMP02_RS02035
old locus tag: RVIR1_04120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034659.1
GO function: GO:0140110 - transcription regulator activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NrdR
translation: MNCPFCDKGDTKVIDSRLSSDGQQVRRRRECPCCSERFSSFESAELGLPRVIKRDNTRSAFDQEKLRAGMLKALEKRPISSEQVEAVILRLVKKLRSSGEREISSRQLGEWVMEELCDLDPVAYVRFASVYRSFQDIQAFNQTIEQLKNDLSLNKKQANDVETEKK
SIO_010081: DMP02_RS02035
subclass of: SO_0000673
so part of: DMP02_RS02035
location: 438093..438593
location: region:438093-438593:1
so has part: feature:438093-438593:1:exon

WP_126322434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438093-438593:1:exon

DMP02_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: nusB
locus tag: DMP02_RS02040
old locus tag: RVIR1_04130
so part of: sequence
location: 438568..439011
location: region:438568-439011:1
so has part: feature:438568-439011:1:exon
subclass of: SO_0000010

position:438568:1
position: 438568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439011:1
position: 439011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438568-439011:1:exon

DMP02_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: nusB
locus tag: DMP02_RS02040
old locus tag: RVIR1_04130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035513.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antitermination factor NusB
translation: MMSKPKKNKFKARKRARRFAMQAIYQWQLTQHTFSEIEKQFLAQEEMISVDTAYFCDLVRGIIENHSSLDQQLQVFLDRPLKALDLVECAILRLAAFELCHQPELPYKVVLDEAIELAKSFGATDGHKYVNGILHQVAQKVRPLEFS
SIO_010081: DMP02_RS02040
subclass of: SO_0000673
so part of: DMP02_RS02040
location: 438568..439011
location: region:438568-439011:1
so has part: feature:438568-439011:1:exon

WP_126322435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438568-439011:1:exon

DMP02_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: thiL
locus tag: DMP02_RS02045
old locus tag: RVIR1_04140
so part of: sequence
location: 439016..439984
location: region:439016-439984:1
so has part: feature:439016-439984:1:exon
subclass of: SO_0000010

position:439016:1
position: 439016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439984:1
position: 439984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439016-439984:1:exon

DMP02_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: thiL
locus tag: DMP02_RS02045
old locus tag: RVIR1_04140
EC number: 2.7.4.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035591.1
GO function: GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine-phosphate kinase
translation: MLSISEFDLIQRFFNQEKNNRADVIHGIGDDAAVLQPPVGQQLVVTTDTLVAGQHFPENTSPFDIGYKSLAVNLSDLAAMGAEPVWILLVLSLPMVDKAWLSEFTQGFFSLMHRFQCQLVGGDLTRGPLSITVQALGLIPNGKALLRSGAQTGDRIYVTGTLGDAGLALADLQNKINVLTLAQRSVVLTHLNRPDPRVAIGLALRDIANSAIDISDGLAADLGHILAASHVGAVVDITKLPISDALLALPLEKAQQLALSAGDDYELCFTVPEAHESALKQALEKIACPYTAIGFITKESGLLLQDENGKSFQLEKQGFLHF
SIO_010081: DMP02_RS02045
subclass of: SO_0000673
so part of: DMP02_RS02045
location: 439016..439984
location: region:439016-439984:1
so has part: feature:439016-439984:1:exon

WP_126322436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439016-439984:1:exon

DMP02_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02050
old locus tag: RVIR1_04150
so part of: sequence
location: 440027..440509
location: region:440027-440509:1
so has part: feature:440027-440509:1:exon
subclass of: SO_0000010

position:440027:1
position: 440027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440509:1
position: 440509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440027-440509:1:exon

DMP02_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02050
old locus tag: RVIR1_04150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018577645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerophosphatase A
translation: MQKALVKKVFSNPIYFIAFGFGSGLSPFAPGTCGTLAAIPLYYFMQSLSLVNYSLILLLAILIGIWVCDVTERDMGIHDYSGIVWDEVCGFGLTMWAAPKGWLWIAIGFFLFRLFDIVKPWPIAWMDRKLPRGFGVMVDDLMAAVYAWIALHGISYFFFY
SIO_010081: DMP02_RS02050
subclass of: SO_0000673
so part of: DMP02_RS02050
location: 440027..440509
location: region:440027-440509:1
so has part: feature:440027-440509:1:exon

WP_126322437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440027-440509:1:exon

DMP02_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02055
old locus tag: RVIR1_04170
so part of: sequence
location: 440867..441127
location: region:440867-441127:1
so has part: feature:440867-441127:1:exon
subclass of: SO_0000010

position:440867:1
position: 440867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441127:1
position: 441127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440867-441127:1:exon

DMP02_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02055
old locus tag: RVIR1_04170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSILDPAIFYDDNKWRVKIDPKYLNSIPYGGARTFFENYPSKRLPEYLKEDRQGQLFDEFNRCPDEFYKSERFNLKKFKFTDEVY
SIO_010081: DMP02_RS02055
subclass of: SO_0000673
so part of: DMP02_RS02055
location: 440867..441127
location: region:440867-441127:1
so has part: feature:440867-441127:1:exon

WP_126322438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440867-441127:1:exon

DMP02_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02060
old locus tag: RVIR1_04190
so part of: sequence
location: complement(441508..441708)
location: region:441508-441708:-1
so has part: feature:441508-441708:-1:exon
subclass of: SO_0000010

position:441508:-1
position: 441508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441708:-1
position: 441708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441508-441708:-1:exon

DMP02_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02060
old locus tag: RVIR1_04190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFEPTNHLDTEASDALATALRNYTGTLLFVSHDRYFINKIANRVLFISHNKKLQDVKQLDAIYYD
SIO_010081: DMP02_RS02060
subclass of: SO_0000673
so part of: DMP02_RS02060
location: complement(441508..441708)
location: region:441508-441708:-1
so has part: feature:441508-441708:-1:exon

WP_126322439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441508-441708:-1:exon

DMP02_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rlmH
locus tag: DMP02_RS02065
old locus tag: RVIR1_04200
so part of: sequence
location: complement(441836..442306)
location: region:441836-442306:-1
so has part: feature:441836-442306:-1:exon
subclass of: SO_0000010

position:441836:-1
position: 441836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442306:-1
position: 442306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441836-442306:-1:exon

DMP02_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rlmH
locus tag: DMP02_RS02065
old locus tag: RVIR1_04200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017411988.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
translation: MKLRLIAVGTRMPEWVSEGFENYQKRLPIEYKFELISIPPSKRGKTSHIPSLIVEEEKKIFAAIPKHSKIIALDERGKLWNTKQLAETLQQWQSDSEDVSFLIGGPDGLGSDCLNKASHRWSLSPLTLPHPLVRIIMLEQLYRAWSILNNHPYHRE
SIO_010081: DMP02_RS02065
subclass of: SO_0000673
so part of: DMP02_RS02065
location: complement(441836..442306)
location: region:441836-442306:-1
so has part: feature:441836-442306:-1:exon

WP_126322440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441836-442306:-1:exon

DMP02_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsfS
locus tag: DMP02_RS02070
old locus tag: RVIR1_04210
so part of: sequence
location: complement(442306..442647)
location: region:442306-442647:-1
so has part: feature:442306-442647:-1:exon
subclass of: SO_0000010

position:442647:-1
position: 442647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442306-442647:-1:exon

DMP02_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsfS
locus tag: DMP02_RS02070
old locus tag: RVIR1_04210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597420.1
GO function: GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0017148 - negative regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome silencing factor
translation: MTHTSSNKSIIQKDIIALLEDHKAKDITVLDVSDVTSITDLMIICTGNSDRHVKTLAEYVVTAAKQKGITILGVEGAQQGEWVLIDLVDAIVHIMLPNVREFYNLEKLWGNPI
SIO_010081: DMP02_RS02070
subclass of: SO_0000673
so part of: DMP02_RS02070
location: complement(442306..442647)
location: region:442306-442647:-1
so has part: feature:442306-442647:-1:exon

WP_126322441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442306-442647:-1:exon

DMP02_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: nadD
locus tag: DMP02_RS02075
old locus tag: RVIR1_04220
so part of: sequence
location: complement(442759..443430)
location: region:442759-443430:-1
so has part: feature:442759-443430:-1:exon
subclass of: SO_0000010

position:442759:-1
position: 442759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443430:-1
position: 443430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442759-443430:-1:exon

DMP02_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: nadD
locus tag: DMP02_RS02075
old locus tag: RVIR1_04220
EC number: 2.7.7.18
inference: COORDINATES: protein motif:HMM:NF000840.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate-nucleotide adenylyltransferase
translation: MSGNTDKNSSAKSIGILGGTFDPIHCGHLHIAQALQQQLHCQEIRFIPCKNPLLGKKAIANEQQRLTMLQRALVSYPHFIIDEREIKRSTPSYTIDTLRSLRKEFKENPLALILGRDNLAHLNHWHEWTALIQSAHLVIVPRIGCTATYNDTIQDLIKKHQTHDPALLLQQPAGLLFMATVKPLAISSTAIRAAIAQGSMPTGLLPSSVLDYILEQKLYTLRT
SIO_010081: DMP02_RS02075
subclass of: SO_0000673
so part of: DMP02_RS02075
location: complement(442759..443430)
location: region:442759-443430:-1
so has part: feature:442759-443430:-1:exon

WP_172593959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442759-443430:-1:exon

DMP02_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: holA
locus tag: DMP02_RS02080
old locus tag: RVIR1_04230
so part of: sequence
location: complement(443515..444537)
location: region:443515-444537:-1
so has part: feature:443515-444537:-1:exon
subclass of: SO_0000010

position:443515:-1
position: 443515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444537:-1
position: 444537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443515-444537:-1:exon

DMP02_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: holA
locus tag: DMP02_RS02080
old locus tag: RVIR1_04230
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR01128.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta
translation: MQLRYEQLNTLLEKKPLAPIYFVSGEELLLVQMACDSIRNSAKKQGFSEREVFYAESGFNWHTLLTHANNYGLFSEKQILELHLLQGVSESAAQTLKTYASDPPANKLLLVITGKLDRRLLQTTWFKSIDSVGVFMALWPMEQAQLSRWITERLASLGLKAEKEAIQYLISATEGNLLASAQEIEKLSLYFASDTQHIITPEAMMQALSDNARFDPFKLTDAALQGEAKRCLRILNRLREEGVEPLLILWSLSRECRQLASLAFQLAKGQNLRTLFQTHHIWEKRQPLFQQALQRHSLTHWYTLLKLATQSDRIIKGVISGNIWHALQQLSLQLAGIKPL
SIO_010081: DMP02_RS02080
subclass of: SO_0000673
so part of: DMP02_RS02080
location: complement(443515..444537)
location: region:443515-444537:-1
so has part: feature:443515-444537:-1:exon

WP_126322443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443515-444537:-1:exon

DMP02_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: lptE
locus tag: DMP02_RS02085
old locus tag: RVIR1_04240
so part of: sequence
location: complement(444544..445074)
location: region:444544-445074:-1
so has part: feature:444544-445074:-1:exon
subclass of: SO_0000010

position:444544:-1
position: 444544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445074:-1
position: 445074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444544-445074:-1:exon

DMP02_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: lptE
locus tag: DMP02_RS02085
old locus tag: RVIR1_04240
inference: COORDINATES: protein motif:HMM:NF016290.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS assembly lipoprotein LptE
translation: MNIRLYHFFCLLIILLTLNSCGFQLRGYREGQTIPFHTLYLQSSSPYSNFNKALRQTLNSLGIDTRVSPPAPVTLQILSQNFNRTITSLGNAGQTTTYLLSYTVIFQLTDRQHHILLLPQHILVTRNFSITSNQLSGDLNTQNDLQEDMQRDAIQQLITRLSSPALYRKFCQMPSR
SIO_010081: DMP02_RS02085
subclass of: SO_0000673
so part of: DMP02_RS02085
location: complement(444544..445074)
location: region:444544-445074:-1
so has part: feature:444544-445074:-1:exon

WP_172593960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444544-445074:-1:exon

DMP02_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: leuS
locus tag: DMP02_RS02090
old locus tag: RVIR1_04250
so part of: sequence
location: complement(445085..447586)
location: region:445085-447586:-1
so has part: feature:445085-447586:-1:exon
subclass of: SO_0000010

position:445085:-1
position: 445085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447586:-1
position: 447586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445085-447586:-1:exon

DMP02_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: leuS
locus tag: DMP02_RS02090
old locus tag: RVIR1_04250
EC number: 6.1.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010957661.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MQEEYQANVIEAEVQKFWHEHECFKVIEDLNKEKFYCLSMFPYPSGTLHVGHVRNYVLGDVIARYQRMLGKNVLHPIGWDAFGLPAENAALKHGVAPADWTYRNIDHMRTQFKQLGLSFDWSREITTCKPDYYRWEQWFFIQLLKKALVYKKNSVVNWDPVDQTVLANEQVINGRGWRSGALIERKEIPQWFLKITAYADELLNSLESLEGWPEEVKAMQRHWIGRSPGLAIQFLINDPQLTSIEIFTTRPDTLFGASFLAISPQHPLARYAAEHNPQVQKFIDSYQHVPVSEAASATLEKQGIASGITALHPMTREALPIWIANFVKTDYGCGAIMGVPAHDERDFEFAIKYQLPILPVIESLNKKPHDYHQGPLVTSGQLINSGPFTGLTSEKASTAISELLIKHELATPKTHYRLRDWGISRQRYWGTPIPIIYCNDCGAVPVPEKDLPVILPESVQLSGVGSPLKAMPEFYQTTCPQCKQAATRETDTFDTFVESSWYYARFACPTQDKAMLDDRAKYWTPVDHYVGGIEHAVLHLLYARFFHKALRDIELLNSNEPFTRLLTQGMVLKDGAKMSKSKGNTVDPEALIKKYGSDTLRLFSLFAAPPEQSLEWSDAGVEGAYRFLKRLWAFVYTHTWLHELNEACETNLVHPIDWARTPIEERNLRRQIYEILQLAKHDYERQQFNTVIAGCMKLLNLLQAAGQSLHSPSETSHQSLKQLLQEGLSILLRLLAPIVPHITHTLWQALQFKGLIIKATWPKVAADALTMEEIEWVVQINGKLRARLSLATHSDEETIKTAVLNNPHIKRYTENQAIKKIIVVPKKLVNIVI
SIO_010081: DMP02_RS02090
subclass of: SO_0000673
so part of: DMP02_RS02090
location: complement(445085..447586)
location: region:445085-447586:-1
so has part: feature:445085-447586:-1:exon

WP_126323481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445085-447586:-1:exon

DMP02_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: lnt
locus tag: DMP02_RS02095
old locus tag: RVIR1_04260
so part of: sequence
location: complement(447748..449232)
location: region:447748-449232:-1
so has part: feature:447748-449232:-1:exon
subclass of: SO_0000010

position:447748:-1
position: 447748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449232:-1
position: 449232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447748-449232:-1:exon

DMP02_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: lnt
locus tag: DMP02_RS02095
old locus tag: RVIR1_04260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035899.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MNSIKPYFKEGLALIIGGLLALAFAPLALYPLAIICPGLLLLLWLNCTPRRSFFIGLFFGIGFFSVGVSWVFISIHVFGNTSILLSLFITGLFIFILALFTGLQGYFLNRFFPDNNRIKRYLIFPSLWTLNEWVRSWILTGFPWLLLSTSQINSPLAGYAPLIGGLGVTFLVTLSSALLVSIIIEKEKKRLLPLLLLIVLWIVGYGLNFIHWTRVVGQPIQVSLIQANIPQEIKWDPQYTQTSLDKYNQLTQAHWHSRLIIWPEAAIPILQHNARPFLNQLDKEAKQHGVTLITGIPIQEGFQYYNGMLAVGVDHAQYYKQRLVIFGEYLPWWIAWAQGLLNLLDIPMSSFSPGPPNQTTFKVADVNLGTFICYEIAYPSLVREALPKAQLLLTINDDAWFGHSFALAQHLQIGQFQALATGRYLLFLSNTGMTAIVTPQGNIQAQLPSFKTSTLTGTVYALSGTTPWVKFGDGPSIMFLVGLIILCYAYTLRT
SIO_010081: DMP02_RS02095
subclass of: SO_0000673
so part of: DMP02_RS02095
location: complement(447748..449232)
location: region:447748-449232:-1
so has part: feature:447748-449232:-1:exon

WP_126322445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447748-449232:-1:exon

DMP02_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: sohB
locus tag: DMP02_RS02100
old locus tag: RVIR1_04270
so part of: sequence
location: complement(449241..450233)
location: region:449241-450233:-1
so has part: feature:449241-450233:-1:exon
subclass of: SO_0000010

position:449241:-1
position: 449241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450233:-1
position: 450233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449241-450233:-1:exon

DMP02_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: sohB
locus tag: DMP02_RS02100
old locus tag: RVIR1_04270
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034700.1
GO function: GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease SohB
translation: MSFLLQYSEFLLKLSTLVLAILILAAGLFAIARKAKEQARLKLCINKLNTKYQEFADVLNAEILTKSAKKKITKEKKIKLKKQSKQANKHIFVLNFQGDIKGSAVCGLREEITAILQVATPQDEVVLKLESGGGMVSPYGLAASQLQRLKNKRIPLTISIDKIAASGGYLMACVADKILAAPFAIIGSIGVVAQLPNFHRFLKKRDIDFELLTAGEYKRTLTMFGENTEKAREKTKEDLEEIHRLFKQFIEANRKQVNITQVATGAHWLAKDALELKLVDELITSDDYLMNQACSNHADIYELKFLMKKSVADKLSEKLTHMTSHLDWFK
SIO_010081: DMP02_RS02100
subclass of: SO_0000673
so part of: DMP02_RS02100
location: complement(449241..450233)
location: region:449241-450233:-1
so has part: feature:449241-450233:-1:exon

WP_126322446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449241-450233:-1:exon

DMP02_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: kdsA
locus tag: DMP02_RS02105
old locus tag: RVIR1_04280
so part of: sequence
location: 451084..451917
location: region:451084-451917:1
so has part: feature:451084-451917:1:exon
subclass of: SO_0000010

position:451084:1
position: 451084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451917:1
position: 451917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451084-451917:1:exon

DMP02_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: kdsA
locus tag: DMP02_RS02105
old locus tag: RVIR1_04280
EC number: 2.5.1.55
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034832.1
GO function: GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-8-phosphooctulonate synthase
translation: MKLLDFEIGLDKPLFLIAGPCVIESEQLAMDTAGQLKEITQRLKIPFIYKSSFDKANRSSSESFRGLGIEEGLRILEKVKKALQLPILTDVHEDTPLSEVASVVDVMQTPAFLCRQTNFIQNVAKQGLAINIKKGQFLSPWEMSNVVKKAREVSEGVIMVCERGVSFGYNNLVSDMRSLAVMRETACPVVFDATHSVQLPGKEGGRSGGQREFIPVLARAAVAVGIAGLFMETHPNPEKALSDGPNAWPLGKMEALLETLKELDQLVKKTMLIETTL
SIO_010081: DMP02_RS02105
subclass of: SO_0000673
so part of: DMP02_RS02105
location: 451084..451917
location: region:451084-451917:1
so has part: feature:451084-451917:1:exon

WP_126322447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451084-451917:1:exon

DMP02_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: eno
locus tag: DMP02_RS02110
old locus tag: RVIR1_04290
so part of: sequence
location: 451950..453251
location: region:451950-453251:1
so has part: feature:451950-453251:1:exon
subclass of: SO_0000010

position:451950:1
position: 451950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453251:1
position: 453251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451950-453251:1:exon

DMP02_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: eno
locus tag: DMP02_RS02110
old locus tag: RVIR1_04290
EC number: 4.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034888.1
GO function: GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopyruvate hydratase
translation: MSKIKSITAYEILDSRGNPTIETELVLVSGEKVSACVPSGASTGSLEALELRDNDSNRYQRKGVLKAVHHVNSIIQKRLIGKEVDDQENLDKEMIALDGSPNKENLGANAILSVSLAIAKAAALNRGQELYEYLASLAAHPSSEKFIMPVPMMNIINGGAHADNNLDIQEFMVLPIGASSFSEALRAGVEIFQALKTSLKKKGFNTNVGDEGGFAPDLRSHSEAIDCILEAIVQAGYTAGKDIYLGLDAASTEFYKEGKYCLENKKLNQEEWIAYLENLAKQYPIISIEDGMAEADEAGWVALTQRLGKKVQLVGDDLFVTNPTLFAQGIHKRLANAILIKFNQIGTLSETLQAIALAKKANYAAIISHRSGETEDTTIADLAVGTGVGQIKTGSACRTDRVAKYNRLLRIEASLKEKSIYAGASTFSRFLNG
SIO_010081: DMP02_RS02110
subclass of: SO_0000673
so part of: DMP02_RS02110
location: 451950..453251
location: region:451950-453251:1
so has part: feature:451950-453251:1:exon

WP_126322448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451950-453251:1:exon

DMP02_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ftsB
locus tag: DMP02_RS02115
old locus tag: RVIR1_04300
so part of: sequence
location: 453256..453540
location: region:453256-453540:1
so has part: feature:453256-453540:1:exon
subclass of: SO_0000010

position:453256:1
position: 453256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453540:1
position: 453540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453256-453540:1:exon

DMP02_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ftsB
locus tag: DMP02_RS02115
old locus tag: RVIR1_04300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsB
translation: MKPFIIILTVLFLVLQYKLWFEKDGFWRVQRLKQEIAKQTQENLQLSQRNETLVAEIKDLKVGKAALEAHARNDLNMVKPNELFYLIVDKDKKK
SIO_010081: DMP02_RS02115
subclass of: SO_0000673
so part of: DMP02_RS02115
location: 453256..453540
location: region:453256-453540:1
so has part: feature:453256-453540:1:exon

WP_126322449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453256-453540:1:exon

DMP02_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02120
old locus tag: RVIR1_04310
so part of: sequence
location: complement(453749..454474)
location: region:453749-454474:-1
so has part: feature:453749-454474:-1:exon
subclass of: SO_0000010

position:453749:-1
position: 453749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454474:-1
position: 454474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453749-454474:-1:exon

DMP02_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02120
old locus tag: RVIR1_04310
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MDKKINTHNKEKNKIEIPLEIQERARRLRFLRKMTRLSMKEFAQLCNLGLTTINYWEQGYSSITERGAKKVIKALREEGIECSTIWLLSGLGTQPKITDPSKLSKINYPSIETSPQIIREEDSGYLSGRIKEELNLFQSIHPDNLAYLINNESMLPLYCKGDIVAGKKLTGKNMELANGIDCIVETEKNTLEVRRVRIGQATNSFDLYVINPEASLEFPPLRNIKINALAPIIRIWKPSKF
SIO_010081: DMP02_RS02120
subclass of: SO_0000673
so part of: DMP02_RS02120
location: complement(453749..454474)
location: region:453749-454474:-1
so has part: feature:453749-454474:-1:exon

WP_126322450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453749-454474:-1:exon

DMP02_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02125
old locus tag: RVIR1_04320
so part of: sequence
location: 455225..455668
location: region:455225-455668:1
so has part: feature:455225-455668:1:exon
subclass of: SO_0000010

position:455225:1
position: 455225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455668:1
position: 455668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455225-455668:1:exon

DMP02_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02125
old locus tag: RVIR1_04320
inference: COORDINATES: protein motif:HMM:NF012422.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MVISKREKDAVWNNVFVREGDYYSSLAELSLLNKDIRNPSFLQLRIETLFLAHKYPKSSIFLTKFSEQELGCLLLAAWGFEIGETAEILGLKEDSINKCRANISKKLGTRNIPHSVFIATQAGILTFDNVDFILQPKNKTTQHIKKI
SIO_010081: DMP02_RS02125
subclass of: SO_0000673
so part of: DMP02_RS02125
location: 455225..455668
location: region:455225-455668:1
so has part: feature:455225-455668:1:exon

WP_126322451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455225-455668:1:exon

DMP02_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02130
old locus tag: RVIR1_04330
so part of: sequence
location: 455722..456600
location: region:455722-456600:1
so has part: feature:455722-456600:1:exon
subclass of: SO_0000010

position:455722:1
position: 455722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456600:1
position: 456600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455722-456600:1:exon

DMP02_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02130
old locus tag: RVIR1_04330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPIIKLRGHLHTSSGKYASAVSIISLDQSHQQGIEFEAFCLAINEQHEKGNISKLTIIETGYLKRHYLRLDKNYCITSEADAAAIQLGKNWVKEQLSSLHLLKMPVEILSWQEIIDSDFLSKVKNDSISDNIFIGHIKTLAEKYAEKLEVKYNPNGLASMKEACLKAARAYLVEESSIIAGLKRRGFDFQLYPGNRNAALRYIAKKYFSGTQSIPWIRYDIKYPSLELKEKKLNPSASLFFEKADASTQETKNKIVELLSSLLNEEKFYFLTEQLNKLEQSARIANERDIK
SIO_010081: DMP02_RS02130
subclass of: SO_0000673
so part of: DMP02_RS02130
location: 455722..456600
location: region:455722-456600:1
so has part: feature:455722-456600:1:exon

WP_126322452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455722-456600:1:exon

DMP02_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02135
old locus tag: RVIR1_04340
so part of: sequence
location: 456581..457621
location: region:456581-457621:1
so has part: feature:456581-457621:1:exon
subclass of: SO_0000010

position:456581:1
position: 456581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457621:1
position: 457621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456581-457621:1:exon

DMP02_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02135
old locus tag: RVIR1_04340
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing sensor histidine kinase
translation: MKEILNENLLELYEPIIKNYIYKELPINIFVSNKDGYIVWGNSRVIGTLNETKETFMGKHLSTWGDENWNNCKKVIETGHEYTEEEIGLDNHIYLTTRKPIPVENGCDIAGVIGLSLDITDRKQAEMTKCEFLMNMGHELRTPFCGIITVLELLYGKEEDLKKKSLLEMSLYSSKRLLKFMNDIQEVSRLGHLPLDEELCNMKEMLANIILFLMPTTEMKKLEIEASCTGKETMINRYRIEKILLNLMGNAVKFTEQGTITVSIKISSMLTIVVSDTGIGIDKKHHEKIFENFFKVVASYKKDEYAGIGKGLYLVKRYTEELQGSISVQSALGKGSVFTVMIPTRR
SIO_010081: DMP02_RS02135
subclass of: SO_0000673
so part of: DMP02_RS02135
location: 456581..457621
location: region:456581-457621:1
so has part: feature:456581-457621:1:exon

WP_126322453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456581-457621:1:exon

DMP02_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02140
old locus tag: RVIR1_04350
so part of: sequence
location: 457664..458587
location: region:457664-458587:1
so has part: feature:457664-458587:1:exon
subclass of: SO_0000010

position:457664:1
position: 457664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458587:1
position: 458587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457664-458587:1:exon

DMP02_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02140
old locus tag: RVIR1_04350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MSVTIHQPHDKLAKYSLTDKKIAIDFLKKNLPAKIYARIDIVTLELTDKSFITSQFKSFHADIIYRCQMGGKEGFIFFLIEAESSAKDELIAFRKLQYIIGAMDQHLRQGHKKLPIILPICVYNGSTSPYPYSCDVYDCFNNPEFAREIAFKPFILIDLTILSDEEIAQHGLAALMEMLLKHSHAKNFVARLKKSLGLIKDNLSQFDKGYREFVIKYILNETRDEAPDALKQLIDTLNIIFPKEKNLIMTFAQQLQQQGLQQGLQQGEYRIQIAIAKKLIVQGKSVQYVQDLTGLSENEVMNLVNRH
SIO_010081: DMP02_RS02140
subclass of: SO_0000673
so part of: DMP02_RS02140
location: 457664..458587
location: region:457664-458587:1
so has part: feature:457664-458587:1:exon

WP_126322454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457664-458587:1:exon

DMP02_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: lolD
locus tag: DMP02_RS02145
old locus tag: RVIR1_04360
so part of: sequence
location: complement(458612..459307)
location: region:458612-459307:-1
so has part: feature:458612-459307:-1:exon
subclass of: SO_0000010

position:458612:-1
position: 458612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459307:-1
position: 459307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458612-459307:-1:exon

DMP02_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: lolD
locus tag: DMP02_RS02145
old locus tag: RVIR1_04360
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006870650.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein-releasing ABC transporter ATP-binding protein LolD
translation: MSNLNTDKPLLACTNLTKTFHDGSLYVEVLKSINFSVQARERIAIVGPSGSGKSTLLHLLGGLDQVSSGQVSLAGHDLATLSEVKRSHLRNRYLGFIYQFHHLLPEFTVLENTCIPLLLADVNPLVAEKKALALLKKVGLLARQQHKLGELSGGERQRTAIVRALVNDPLCILADEPTGNLDSHTAEQVYQTLLELNEASNTSLIIVTHDRKLASRMDRILQMNDGQLISI
SIO_010081: DMP02_RS02145
subclass of: SO_0000673
so part of: DMP02_RS02145
location: complement(458612..459307)
location: region:458612-459307:-1
so has part: feature:458612-459307:-1:exon

WP_126322455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458612-459307:-1:exon

DMP02_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02150
old locus tag: RVIR1_04370
so part of: sequence
location: complement(459300..460556)
location: region:459300-460556:-1
so has part: feature:459300-460556:-1:exon
subclass of: SO_0000010

position:459300:-1
position: 459300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460556:-1
position: 460556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459300-460556:-1:exon

DMP02_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02150
old locus tag: RVIR1_04370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005768593.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein-releasing ABC transporter permease subunit
translation: MFRPIALYIGLRYTRAKRRNHFISFISLTSMIGIALGVTVLITVLSVMNGFDEEIRSRIFSMATQVAISATNGQALSDTSALKQFALKQTHVKAAAPFVEGQGMLVNLGQPHPILLTGVNPEQEKQVSEIPSKIVEGNFNLLPGHYNIVLGEELATQLGMDIGDKVNVITPRVALTPAGIMPRFKTFTVSGIFRVGRSFGFESNMAYIALQDAQTLFQLGQGVTGLRLKLDDLYAAPQVSLALSKQLPPSYQINDWTNTYGSLMYAIGLEKKMMFFILLLLIAISAFNLVSSLMMVVTDKQSDIAILRTLGATPRTILGIFMVQGCIIGLVGTLIGLIAGTLLAFYASDIVSFLEHSVFHTEILASNVYFFVDKLPSKIEGSDILHICLAALGMSLLATIYPALKASKTAPAEALRYE
SIO_010081: DMP02_RS02150
subclass of: SO_0000673
so part of: DMP02_RS02150
location: complement(459300..460556)
location: region:459300-460556:-1
so has part: feature:459300-460556:-1:exon

WP_126322456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459300-460556:-1:exon

DMP02_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02155
old locus tag: RVIR1_04380
so part of: sequence
location: complement(460589..461392)
location: region:460589-461392:-1
so has part: feature:460589-461392:-1:exon
subclass of: SO_0000010

position:460589:-1
position: 460589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461392:-1
position: 461392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460589-461392:-1:exon

DMP02_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02155
old locus tag: RVIR1_04380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012978967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-ACP reductase
translation: MGLLDNKRALIVGLASDRSIAYGIAKAMYREGASLAFAYQGERLKERVSKMAKNDFNSELVFPCDVSSDEEIENLIKALGKHWDGLDILVHSVAYAPADQLKGDYLEHTNREGFRIAHDISSYSLVGLAKAAFPLMKDRPQGGAILTLSYLGAEKALQNYNIMGLAKASLEANVRYLANSLGPKKIRVNAVSAGPIRTLAASGIAEFKKILNYNEAVTPLRQNTTIEQVGNTAAFLCSDLASGITGEVVHVDGGFHAIVSMGENTPA
SIO_010081: DMP02_RS02155
subclass of: SO_0000673
so part of: DMP02_RS02155
location: complement(460589..461392)
location: region:460589-461392:-1
so has part: feature:460589-461392:-1:exon

WP_126322457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460589-461392:-1:exon

DMP02_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: udk
locus tag: DMP02_RS02160
old locus tag: RVIR1_04390
so part of: sequence
location: complement(461404..462042)
location: region:461404-462042:-1
so has part: feature:461404-462042:-1:exon
subclass of: SO_0000010

position:461404:-1
position: 461404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462042:-1
position: 462042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461404-462042:-1:exon

DMP02_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: udk
locus tag: DMP02_RS02160
old locus tag: RVIR1_04390
EC number: 2.7.1.48
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018575886.1
GO function: GO:0004849 - uridine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uridine kinase
translation: MTQRCIIIGIAGASASGKSLLAHTIVKELGSEQVAVIAEDSYYKNNSALTPEERAQVNYDHPDAFDHALLINHLKQLQAGKSVEIPIYNHTLHIREQQTRCVGPHSIIVLEGILLFAELALRERMDIRIYMDTPLDICLIRRIKRDVIERGREMESVLAQYQATVRPMYSQFIEPSKHYADIIIPRGGENRIAIDMIKAKIRELLIDFSEKN
SIO_010081: DMP02_RS02160
subclass of: SO_0000673
so part of: DMP02_RS02160
location: complement(461404..462042)
location: region:461404-462042:-1
so has part: feature:461404-462042:-1:exon

WP_126322458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461404-462042:-1:exon

DMP02_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02165
old locus tag: RVIR1_04400
so part of: sequence
location: complement(462272..463006)
location: region:462272-463006:-1
so has part: feature:462272-463006:-1:exon
subclass of: SO_0000010

position:462272:-1
position: 462272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463006:-1
position: 463006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462272-463006:-1:exon

DMP02_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02165
old locus tag: RVIR1_04400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAFIKVVGNAPDNAKLFSLKYRIFCDLSKTTYQKTTKLIDAIGDTLTNDLKFEKSNHKELKGKTVLKFNDKILIEGNTAFRAVLHSYLNSKFTTNKEKVYCEFTQLEAEFKSIHQGSQLTKAKVENACNNLDSLADKLTLLELCYKKISETHYFRRHALIDRCFLFMKNPLTMSQRKHIGLLKAKMDDLVNEHLLKIADEPTKKEFKWVLENYFELMHHKDRRVNFNSSPDAQANNLHASLRS
SIO_010081: DMP02_RS02165
subclass of: SO_0000673
so part of: DMP02_RS02165
location: complement(462272..463006)
location: region:462272-463006:-1
so has part: feature:462272-463006:-1:exon

WP_126322459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462272-463006:-1:exon

DMP02_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02170
old locus tag: RVIR1_04410
so part of: sequence
location: complement(463051..464388)
location: region:463051-464388:-1
so has part: feature:463051-464388:-1:exon
subclass of: SO_0000010

position:463051:-1
position: 463051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464388:-1
position: 464388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463051-464388:-1:exon

DMP02_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02170
old locus tag: RVIR1_04410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVHNGLLEINEQKDALNTWEIFFNRFYSAEVPKDANVEFDPNQREFIPRENKKAKDKRFSWNDEAKMAYYSGTTERTSHSDDFDDFLNGYTVRVPYNIKLNEPDFKQLEEAILQGNYKDDLFKNESHVFYALWLFKQNKISRQQFSTLLARDQFSKNYPIVKTFPILDSQGKFTKDAEQMLIPMLKKNTFTKFEDWHLQRFRLLIQAAPKSEQIFYISECDPNSVSVEGANQLGNALANAGCWERTNYEGRIYDLHLSFGATEARQIALNGVHGAAANRTKIGVISPGSIKEGVINNYRPTAISINKSGVNPTLQDIHNYSLSTMPAVTKHDIFHAQLHNTISPEFHMAFNHMKEIISAFTKVRSSRLQWILTDREFHGLRKKSIKLNPKKGANYFSKILFNKDLSHTGLPLLFNGYDASNLSDEGIAIIRDMVNEPAKWNNLYK
SIO_010081: DMP02_RS02170
subclass of: SO_0000673
so part of: DMP02_RS02170
location: complement(463051..464388)
location: region:463051-464388:-1
so has part: feature:463051-464388:-1:exon

WP_126322460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463051-464388:-1:exon

DMP02_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02175
old locus tag: RVIR1_04420
so part of: sequence
location: complement(464585..464661)
location: region:464585-464661:-1
so has part: feature:464585-464661:-1:exon
subclass of: SO_0000663

position:464585:-1
position: 464585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464661:-1
position: 464661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464585-464661:-1:exon

DMP02_RS02175
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS02175
old locus tag: RVIR1_04420
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(464625..464627),aa:Pro,seq:cgg)
SIO_010081: DMP02_RS02175
subclass of: SO_0000673
so part of: DMP02_RS02175
location: complement(464585..464661)
location: region:464585-464661:-1
so has part: feature:464585-464661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464585-464661:-1:exon

DMP02_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02180
old locus tag: RVIR1_04430
so part of: sequence
location: 464825..466594
location: region:464825-466594:1
so has part: feature:464825-466594:1:exon
subclass of: SO_0000010

position:464825:1
position: 464825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466594:1
position: 466594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464825-466594:1:exon

DMP02_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02180
old locus tag: RVIR1_04430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFNLANVITSFNQIYQKKVKLNKNWGLFYLQPEILTILNSNAQLLQEAVNYEPPFAINRKEQFKTSAEKKSQSEQVNIASLRDGIQKMNLDRVISQRLSWEGRFLARLNNDQVWLGIEEQITQKNESIKQYFRQVRQNWNIHKPFQYHSSEGLLFLLDTIIKYQDIFSLAYKELQQNQQTWFPFSRLPSFIAEAYEAFLKKELEKFDSLSKEVLAALLLRLKTVEQQGLVTCDDVSYTLALQSEWLGLIKFKLPEYRTVLDVNTFNDMQRAIEKHGDESHKSQLYQLAWYQSKIVGNTNEFTTITMSGSRLLTLYDLLAFMSKKKKKWFWFSWGNNTVFQFLEKQQALLTQLFLEPVHDTIILNPIYKSYPELLTLSTQYQLLQQSLFSLKKQPTYWWQWEKKFWKKAWQDWLGQQIDNKRVSLLNKLNETFKEVKKYNFELRNVKFREQVQVILKTIQALRSEGIAKCGNESLINMLQYINEKSSDKKEACIGQTHGSTKASPQPSPHTPNKNAQVLPMMSGGNQQDLYTTESNFNLQLVNSGKNSYRRKMTGLWKTKFSAGDNEPISTKQEPEINKSAGLARAYALL
SIO_010081: DMP02_RS02180
subclass of: SO_0000673
so part of: DMP02_RS02180
location: 464825..466594
location: region:464825-466594:1
so has part: feature:464825-466594:1:exon

WP_126322461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464825-466594:1:exon

DMP02_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02185
old locus tag: RVIR1_04440
so part of: sequence
location: complement(466638..467606)
location: region:466638-467606:-1
so has part: feature:466638-467606:-1:exon
subclass of: SO_0000010

position:466638:-1
position: 466638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467606:-1
position: 467606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466638-467606:-1:exon

DMP02_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02185
old locus tag: RVIR1_04440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034720.1
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MDLTPIQSLVAADFARVDSLIAQCLHSEIPLIPQLATHLIHSGGKRLRPLITLLSAGASGYQGDAHVQLAATLELIHTATLLHDDVIDASELRRGKKTANTLWGNSASILVGDFLYSRAFQLMVKVNNLRALQSLADATNTLSQSEIWQLINCHNPDLDETQYLKIVAGKTGILFSIAAEQPAILAERNEAEITAMLNYGLQLGIAFQLIDDTLDYVGSATRIGKAKGDDLAEGKTTLPLIYALQHADKNQTQLIHEAISQGKRKYLKDIIRIIKSTGAIDYTYQRAKEHAAKAIASLEVIPDSIYKQALATLAEFATTRTH
SIO_010081: DMP02_RS02185
subclass of: SO_0000673
so part of: DMP02_RS02185
location: complement(466638..467606)
location: region:466638-467606:-1
so has part: feature:466638-467606:-1:exon

WP_126323482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466638-467606:-1:exon

DMP02_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpsF
locus tag: DMP02_RS02190
old locus tag: RVIR1_04450
so part of: sequence
location: 467791..468192
location: region:467791-468192:1
so has part: feature:467791-468192:1:exon
subclass of: SO_0000010

position:467791:1
position: 467791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468192:1
position: 468192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467791-468192:1:exon

DMP02_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpsF
locus tag: DMP02_RS02190
old locus tag: RVIR1_04450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018678121.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRHYEIVLLIHPDQSDQVSAMVQRYTTIVKNSGGQVHRLEDWGRRQLAYPINKLLKAHYILMNIECGQEAMTELTENFRFNDAVLRQLIIQQDRAIKEASPLAKAKEAPGQENRREYARNSVEVSALADEHRD
SIO_010081: DMP02_RS02190
subclass of: SO_0000673
so part of: DMP02_RS02190
location: 467791..468192
location: region:467791-468192:1
so has part: feature:467791-468192:1:exon

WP_126322462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467791-468192:1:exon

DMP02_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpsR
locus tag: DMP02_RS02195
old locus tag: RVIR1_04460
so part of: sequence
location: 468223..468462
location: region:468223-468462:1
so has part: feature:468223-468462:1:exon
subclass of: SO_0000010

position:468223:1
position: 468223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468462:1
position: 468462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468223-468462:1:exon

DMP02_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpsR
locus tag: DMP02_RS02195
old locus tag: RVIR1_04460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018578206.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MSNYTNRRRKYCRFSAEGMTEIDYKDINLLKNYITETANIVPSRITGTKARFQRKLTQAIKRARFLALLPYCDKHQYLV
SIO_010081: DMP02_RS02195
subclass of: SO_0000673
so part of: DMP02_RS02195
location: 468223..468462
location: region:468223-468462:1
so has part: feature:468223-468462:1:exon

WP_126322463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468223-468462:1:exon

DMP02_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02200
old locus tag: RVIR1_04470
so part of: sequence
location: 468482..469366
location: region:468482-469366:1
so has part: feature:468482-469366:1:exon
subclass of: SO_0000010

position:468482:1
position: 468482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469366:1
position: 469366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468482-469366:1:exon

DMP02_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02200
old locus tag: RVIR1_04470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGFLHRCASYVMRGRQQAIIIALLFTMLPLLGWISNVIIALVTLRKGVKEGAIVLLWVILPVVVIAALANPWIALYNIVGGSLFGFLLAVILRQTQSWQKVLEAGMLLGLLAVLVVHLIRPDINAVWLAQLGHYAVLLKNQLNFSVNTEQLQFFTKFATGFQVAFLWLGVLINLMLARGLQSMLYNPGRLSPELEAVRLSKWDGLVLVLIVIASLQKIAVAQDALPVVLLTFLLAGLSVLHAVIRLRNGFFKGWFLVFYSLLVVFFPYIAALLVLVALADSYLDFRHRVLPKH
SIO_010081: DMP02_RS02200
subclass of: SO_0000673
so part of: DMP02_RS02200
location: 468482..469366
location: region:468482-469366:1
so has part: feature:468482-469366:1:exon

WP_126322464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468482-469366:1:exon

DMP02_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rplI
locus tag: DMP02_RS02205
old locus tag: RVIR1_04480
so part of: sequence
location: 469420..469872
location: region:469420-469872:1
so has part: feature:469420-469872:1:exon
subclass of: SO_0000010

position:469420:1
position: 469420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469872:1
position: 469872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469420-469872:1:exon

DMP02_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rplI
locus tag: DMP02_RS02205
old locus tag: RVIR1_04480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035292.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MAQVILLEKVYSLGDLGEQGSVRNGYARNYLIPYGKAVPANKETIAQFEAKRAELEKLAQEKLAVAQARADALSQLVLNIPVKAAEEGRLYGSVGLQEIVNAATEAGCPLEKSEIRLPEGALRQLGEHDVTVQLHSDVVVTLKVNIVAEA
SIO_010081: DMP02_RS02205
subclass of: SO_0000673
so part of: DMP02_RS02205
location: 469420..469872
location: region:469420-469872:1
so has part: feature:469420-469872:1:exon

WP_126322465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469420-469872:1:exon

DMP02_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dnaB
locus tag: DMP02_RS02210
old locus tag: RVIR1_04490
so part of: sequence
location: 470017..471390
location: region:470017-471390:1
so has part: feature:470017-471390:1:exon
subclass of: SO_0000010

position:470017:1
position: 470017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471390:1
position: 471390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470017-471390:1:exon

DMP02_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dnaB
locus tag: DMP02_RS02210
old locus tag: RVIR1_04490
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035905.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MLAMQNTDHLKLPPHSLEAEQSVLGGLMLDNQAWDRVAERLQEKDFYLLAHRILFRTIVDFANHAKPFDVVTLTDALKSTNQLAEIGGELYLYELARNTPSAANISAYADIVRERSVLRQLIGIATEITENAYLPDGRSITELVDEAERKVFQISDQGARGSGPQRIGDFLARAVDRIDILFHSDQAITGLSTAYKDLDEMTSGLQPSDLVIVAGRPSMGKTTFAMNMAEHAAIQGSKPVLIFSMEMPGQALAMRMMSSLGRIDQHKIRTGKLSDEDWPRMTSAVSMLSEAKMFIDDTPALSPGEVRARARRVAKEQGALGLIVIDYLQLMQVPGSKENRTTEISEISRSLKALAKELDVPIIALSQLNRSLEQRADKRPVMSDLRDSGAIEQDADVIIFIYRDEVYNEGSPDKGSAEIIIAKQRNGPTGKVRLTFLGKYTRFENFSPQRYHAENYA
SIO_010081: DMP02_RS02210
subclass of: SO_0000673
so part of: DMP02_RS02210
location: 470017..471390
location: region:470017-471390:1
so has part: feature:470017-471390:1:exon

WP_126322466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470017-471390:1:exon

DMP02_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: alr
locus tag: DMP02_RS02215
old locus tag: RVIR1_04500
so part of: sequence
location: 471387..472490
location: region:471387-472490:1
so has part: feature:471387-472490:1:exon
subclass of: SO_0000010

position:471387:1
position: 471387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472490:1
position: 472490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471387-472490:1:exon

DMP02_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: alr
locus tag: DMP02_RS02215
old locus tag: RVIR1_04500
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035535.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MSRPVAVELDLAALQHNVKRIRELAPQSKILAMVKANAYGHGLIPIARALDSSVEGFGVSCSEEALYLRKAGIKQRIVLMEGLFSAAELPLLDQYQLDTVIHDRRQLDLLTQQKLPKPVNVWIKINTGMNRLGLAIQDFPEVLQRCQACAWIEVICVMTHFSSADDPSETTTLQQIEQFEQITSDVKIAKSLANSAAILSYPRSHSEWIRPGLMLYGVSPFSNKSGLQHDLKPVMNLTSEIIAVNQLQPGDHVGYGGTWIAPDNRRIGVVAIGYGDGYPHGAAAGTPVLVNGQLAKLVGQVSMDMLSIDLSTQPEAKQGDPVCLWGAGLPIEQVANSTSTFRYELLCGINRGQLVRMRIEEKNDAKK
SIO_010081: DMP02_RS02215
subclass of: SO_0000673
so part of: DMP02_RS02215
location: 471387..472490
location: region:471387-472490:1
so has part: feature:471387-472490:1:exon

WP_126322467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471387-472490:1:exon

DMP02_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02220
old locus tag: RVIR1_04510
so part of: sequence
location: 472477..472884
location: region:472477-472884:1
so has part: feature:472477-472884:1:exon
subclass of: SO_0000010

position:472477:1
position: 472477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472884:1
position: 472884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472477-472884:1:exon

DMP02_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02220
old locus tag: RVIR1_04510
inference: COORDINATES: protein motif:HMM:NF028308.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RT0821/Lpp0805 family surface protein
translation: MQKNRINHFLIVLFVIMLSACSSVPEEPHSEVNISTSDTDIFVAPSISRSMGSSDRLKLQSLVATAQPQQWTKWVSSATGARFEFTSLSIYVNAQGQGCRNYKMAMRHGFLVHHTFNYTACRDGQGAWQVLKSKS
SIO_010081: DMP02_RS02220
subclass of: SO_0000673
so part of: DMP02_RS02220
location: 472477..472884
location: region:472477-472884:1
so has part: feature:472477-472884:1:exon

WP_126322468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472477-472884:1:exon

DMP02_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dacB
locus tag: DMP02_RS02225
old locus tag: RVIR1_04520
so part of: sequence
location: 472910..474349
location: region:472910-474349:1
so has part: feature:472910-474349:1:exon
subclass of: SO_0000010

position:472910:1
position: 472910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474349:1
position: 474349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472910-474349:1:exon

DMP02_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dacB
locus tag: DMP02_RS02225
old locus tag: RVIR1_04520
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:NF014200.2
GO function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
translation: MKYAISLLLLLFSFSLCAEDKSFAPQTSELFVDLTHPKVLYANHASLALIPASVTKLFVAASALKHWGSYHTFASEIYQRGQWKQGVLIGDLVFYGQGDPAFTNEKMWQLVNNLQQLGLKKITGNLIVNTSYLGNITVSASDRIAAKSYSKVSYDSLPSSAGSNFSTVGVAIMPGEKAGDLAQIKILPYQLQNVRLDGNVMTASGANNTLQLHRLSQAGKEILTLSGTIGLKSVPVILYRSVGNPNILTGALLKAFLKQAGIFLDGKIIIETTPLKKTDKQLAQVQSDSLIHCLQDMLRYSNNYIADVLTLDLERENHTSLSSMKLSEAAKILLATYRRVLHQSSFSQQTELDPIFASGSGLTPSNRISASNLITLLAGMYHDQRDFSLFYGSLVVPGQQTHWHNLSTINHPWMNQVSLKTGYITVPKIVHSLAGYFRMKNGDIGAFAVLFNFPPEAQNDEGQLFNGLIKHLDSVFQRI
SIO_010081: DMP02_RS02225
subclass of: SO_0000673
so part of: DMP02_RS02225
location: 472910..474349
location: region:472910-474349:1
so has part: feature:472910-474349:1:exon

WP_172593961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472910-474349:1:exon

DMP02_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02230
old locus tag: RVIR1_04540
so part of: sequence
location: complement(474659..475246)
location: region:474659-475246:-1
so has part: feature:474659-475246:-1:exon
subclass of: SO_0000010

position:474659:-1
position: 474659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475246:-1
position: 475246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474659-475246:-1:exon

DMP02_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02230
old locus tag: RVIR1_04540
EC number: 6.3.3.2
inference: COORDINATES: protein motif:HMM:TIGR02727.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MDARSALRKKLREYRAKLSLHDQTVASQEITQRLIQDPRFQKSQHVAAYIAINQEVDPELIIKTAWENDKNCYLPVLQKKQLMFSLYKKHMLLIKNQFNIPEPPLLPESIIQPCDLDIVLVPLLGFTNNSERLGMGGGFYDRSFSFLLNDIRPAKPYLIGLAYEWQKVESFESSAWDVPLNAVATEENFYVNTNL
SIO_010081: DMP02_RS02230
subclass of: SO_0000673
so part of: DMP02_RS02230
location: complement(474659..475246)
location: region:474659-475246:-1
so has part: feature:474659-475246:-1:exon

WP_126322470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474659-475246:-1:exon

DMP02_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ssrS
locus tag: DMP02_RS02235
so part of: sequence
location: complement(475282..475456)
location: region:475282-475456:-1
so has part: feature:475282-475456:-1:exon
subclass of: SO_0000011

position:475282:-1
position: 475282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475456:-1
position: 475456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475282-475456:-1:exon

DMP02_RS02235
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 676208
nc RNA class: other
gene: ssrS
locus tag: DMP02_RS02235
product: 6S RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00013
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DMP02_RS02235
subclass of: SO_0000673
so part of: DMP02_RS02235
location: complement(475282..475456)
location: region:475282-475456:-1
so has part: feature:475282-475456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475282-475456:-1:exon

DMP02_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02240
old locus tag: RVIR1_04550
so part of: sequence
location: 475637..476206
location: region:475637-476206:1
so has part: feature:475637-476206:1:exon
subclass of: SO_0000010

position:475637:1
position: 475637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476206:1
position: 476206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475637-476206:1:exon

DMP02_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02240
old locus tag: RVIR1_04550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0149 family protein
translation: MQFQAQPPAFDDFYRLLSQAEVVTSPAEIHGMLCGFVCVGPKLNGGFWIDILLKRLGVRPRQGAVVGLYDAACRQLSGLQSFKLLLPDEQHELEKRAEALSLWCEGFLYGLGLLGGGSFDEETSDTVYEALYCIAEIAKLDVSQLEITELDKLAYEEAIEFITQAIPLIYEEVTHCPMKGNAGGSMYLH
SIO_010081: DMP02_RS02240
subclass of: SO_0000673
so part of: DMP02_RS02240
location: 475637..476206
location: region:475637-476206:1
so has part: feature:475637-476206:1:exon

WP_126322471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475637-476206:1:exon

DMP02_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02245
old locus tag: RVIR1_04560
so part of: sequence
location: 476240..477538
location: region:476240-477538:1
so has part: feature:476240-477538:1:exon
subclass of: SO_0000010

position:476240:1
position: 476240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477538:1
position: 477538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476240-477538:1:exon

DMP02_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02245
old locus tag: RVIR1_04560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035206.1
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase P N-terminal domain-containing protein
translation: MFNFSELKKRRRQLMAAIDKDVVIILISAPESLRNGDVHYPYRQDSDFYYLTAFPESNAVALLLPDSKDGKFILFSRPYDVIESIWNGQSIGQENAKKIYGADEAYAIDQLEARLPDFLTTKVRCYYLGSQNQVLIKRLNEVLGRASQLACQEGLVEITQAVHELRLRKSPYELDCLRKAARISAQAHIKAMQACRPGRYEYQIEAELLYEFYQNGSRAVAYPNIVASGSNACILHYTDNSALLKSGDLLLIDAGCEYQSYASDITRSFPVNGRFSPEQKIIYEIVLKAQQALIAAIKPGVLWDSLQARCVRIITEGLLDLGLLKGEPESLIENKSYKKFYMHGCSHWLGLDVHDVGCYKLNKKWRPLEANMVFTVEPGIYIAAQTEGVDEKWWNIGVRIEDDVCVMKDGCEVLSQDAPKKISDIESLMNSS
SIO_010081: DMP02_RS02245
subclass of: SO_0000673
so part of: DMP02_RS02245
location: 476240..477538
location: region:476240-477538:1
so has part: feature:476240-477538:1:exon

WP_126322472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476240-477538:1:exon

DMP02_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02250
old locus tag: RVIR1_04570
so part of: sequence
location: 477535..478818
location: region:477535-478818:1
so has part: feature:477535-478818:1:exon
subclass of: SO_0000010

position:477535:1
position: 477535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478818:1
position: 478818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477535-478818:1:exon

DMP02_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02250
old locus tag: RVIR1_04570
inference: COORDINATES: protein motif:HMM:TIGR01988.1
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
translation: MKQDHDKRDYDILIMGAGMVGTSLALALSHLPLRIAIIEKTSFNLDITPNLDSKPIALNYASSRILKNLIPWTDLSAYANPIEQVHISEAGCFAAARIKAKAMGVSALGYVIPASLLGCAFTKALIPLTEGSKPLRLDLFNPAQCQALLKNEQVWEAHITTETGELQTISARLVVAADGSDSIVRQLLGIKVQAQSKGQMALVTTLKLARHHHHTAYQRFTSQGVMAALPLLGNQVGFVCTAPQHQIEERQSLSKSEFLAWVQSLFAYRLGQFLESGSLRSYPIKSFIAEPQAQAGLILLGNAAHTLSPIAAQGLNLALQDMAELADRIAKAFVAQKDLADSSISQAYLAARLPAQKQLIGLTENLGRLFQEKFRPLTLIRNSGLLAFDLVSPLKQNISRRLMGTHGRLSPLVRGIAPQQEEEHVKI
SIO_010081: DMP02_RS02250
subclass of: SO_0000673
so part of: DMP02_RS02250
location: 477535..478818
location: region:477535-478818:1
so has part: feature:477535-478818:1:exon

WP_126322473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477535-478818:1:exon

DMP02_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02255
old locus tag: RVIR1_04580
so part of: sequence
location: 478805..480493
location: region:478805-480493:1
so has part: feature:478805-480493:1:exon
subclass of: SO_0000010

position:478805:1
position: 478805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480493:1
position: 480493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478805-480493:1:exon

DMP02_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02255
old locus tag: RVIR1_04580
EC number: 1.1.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035285.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent malic enzyme
translation: MSRFKQVIKEGKILYIETNALGQSLLTTPKLNKGSAFSEQERQQFHLLGKLPYRIETLDEQVLRIYQQFLRKGNDIQKHVYLRSLHDTNETLFYKLVIQNLKEMLPIIYTPTVGKAVEQFSHAFRRPRGLYVAYPDRDRIDEIIENRLNPEVDIIVITDGEGVLGIGDQGIGGMDICIAKLMVYVICGGANPHRLLPIQIDVGTNNEKLLNDPMYLGWRHKRLVGKEYDDMIERTVAAIQRKLPHVYLHWEDFGRENARRNLQRYQEHFCTFNDDMQGTGAVTLAALLTAIKQTKLPLTEQRIVILGAGTAGTGIADQLCAGMMRAGLTREEALARFWLVDKQGLLTEQSADLTEFQKPYARHSVRAMNLETVVREIKPTVLIGCSSQAGAFNEVIVKAMASGVHRPIIFPLSNPTEKAEATPLDLLHWTEGRALIATGSPFGSVEFQGKTFCISQCNNALIYPGIGLGIVIAKAARLSDAMLWEACKALSYYAINTESFNAALLPDFDQIHAISQRIALAVAEQARKEGLSSVSDMVDFTQAIENQFWLPKYYDYRYSSRL
SIO_010081: DMP02_RS02255
subclass of: SO_0000673
so part of: DMP02_RS02255
location: 478805..480493
location: region:478805-480493:1
so has part: feature:478805-480493:1:exon

WP_126322474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478805-480493:1:exon

DMP02_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02260
old locus tag: RVIR1_04590
so part of: sequence
location: 480465..481709
location: region:480465-481709:1
so has part: feature:480465-481709:1:exon
subclass of: SO_0000010

position:480465:1
position: 480465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481709:1
position: 481709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480465-481709:1:exon

DMP02_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02260
old locus tag: RVIR1_04590
inference: COORDINATES: protein motif:HMM:TIGR01988.1
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
translation: MIIDIPQDYDVVIVGAGTAGLTLACGLINQGLRLAIIDKDSESKAPAIRLASVPAYERGDRVSAITQGSQQILENYQVWQRLAKTTLSPFECMEVWEEGSASQLIFDAAETGQPCLGTILYNQVLQTALLTQAKTASEVDWFFSESLSAIQRGPSSILLSLASGQSITTQLLVGADGAQSCVRQLAGIAHSERDYQQEALVATVRTVLAHEKTARQIFLPTGPLAFLPLADSNLSSIVWSTTPEEAKRLKALSEIDFNSALAHAFEQRLGAVEWSSARLNFALKTQHCEQYIKSGIALIGDAAHTIHPLAGQGANLGIADAYCLANTILAAHQKQRALGALYSLRRYERERRFYHRVMGAGIDLIKQTFATKSSFLVNTRQVGLSFIEKTPWLKNYFMRFAMGIPRAETTKLML
SIO_010081: DMP02_RS02260
subclass of: SO_0000673
so part of: DMP02_RS02260
location: 480465..481709
location: region:480465-481709:1
so has part: feature:480465-481709:1:exon

WP_126322475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480465-481709:1:exon

DMP02_RS07195
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07195
old locus tag: RVIR1_04600
so part of: sequence
location: complement(481698..481868)
location: region:481698-481868:-1
so has part: feature:481698-481868:-1:exon
subclass of: SO_0000010

position:481698:-1
position: 481698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481868:-1
position: 481868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481698-481868:-1:exon

DMP02_RS07195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07195
old locus tag: RVIR1_04600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVSSFPFFKKHQDKLMLSDEQIKNLKDDFEKLNTNLNQLENAIHTETQSPSTLKH
SIO_010081: DMP02_RS07195
subclass of: SO_0000673
so part of: DMP02_RS07195
location: complement(481698..481868)
location: region:481698-481868:-1
so has part: feature:481698-481868:-1:exon

WP_172593962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481698-481868:-1:exon

DMP02_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gmhB
locus tag: DMP02_RS02265
old locus tag: RVIR1_04620
so part of: sequence
location: 482237..482800
location: region:482237-482800:1
so has part: feature:482237-482800:1:exon
subclass of: SO_0000010

position:482237:1
position: 482237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482800:1
position: 482800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482237-482800:1:exon

DMP02_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gmhB
locus tag: DMP02_RS02265
old locus tag: RVIR1_04620
EC number: 3.1.3.82
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035118.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
translation: MARELKFIILDRDGVINEESAEYIKSSAEWRPIPGSLEAISLLSQAGYTIVVATNQSGVGRGYYTEEDLAEIHQKMIACAKAQGGVIDKVFYCPHRSDEHCSCRKPASGLFEQIAAAYKIDLSGVVSIGDSLRDIQAAEKLACKPILVLTGNGEETLKNNPELHGKIPVFPNLLTAAQTLLKERENV
SIO_010081: DMP02_RS02265
subclass of: SO_0000673
so part of: DMP02_RS02265
location: 482237..482800
location: region:482237-482800:1
so has part: feature:482237-482800:1:exon

WP_126322476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482237-482800:1:exon

DMP02_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: radA
locus tag: DMP02_RS02270
old locus tag: RVIR1_04630
so part of: sequence
location: 482793..484187
location: region:482793-484187:1
so has part: feature:482793-484187:1:exon
subclass of: SO_0000010

position:482793:1
position: 482793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484187:1
position: 484187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482793-484187:1:exon

DMP02_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: radA
locus tag: DMP02_RS02270
old locus tag: RVIR1_04630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035014.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MSKSKRVYSCQSCGGQFLQWSGQCGECQAWNSLLEETRITTSPANVSPRLSGYTATNDQKIRSLDSIQLDEVKRFSSTIKELDRVLGGGIVPGSVILMGGDPGIGKSTLLLQSLCQLSQQQAVLYITGEESLQQVALRARRLDLPQEKLRLLTETRIESILAHALKEKPQVLVVDSIQTMYTELLQSSPGSVGQVRESAMQLTRLAKQAGIALFLVGHVTKDGVLAGPRVLEHMVDTVLYFEGETDSRHRLIRSVKNRFGAVNELGVFVMTEKGLREVNNPSAMLLSRSDDCVPGSLVTATWQGSRPLLVEVQALVDTSHLGNPRRVTVGLDNNRLAMLLAVLHRHAGVATYDQDVFINVVGGVRLLETSADLPILLAALSSLRNKAIPHDWIAFGEVGLSGEIRPVPNGQERLRDAAKHGFKSAIVPKANISKQTIAGMTIFPVSQLSEAIEIAKQATEVLSV
SIO_010081: DMP02_RS02270
subclass of: SO_0000673
so part of: DMP02_RS02270
location: 482793..484187
location: region:482793-484187:1
so has part: feature:482793-484187:1:exon

WP_126322477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482793-484187:1:exon

DMP02_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02275
old locus tag: RVIR1_04640
pseudo: true
so part of: sequence
location: 484193..485061
location: region:484193-485061:1
so has part: feature:484193-485061:1:exon
subclass of: SO_0000010

position:484193:1
position: 484193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485061:1
position: 485061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484193-485061:1:exon

DMP02_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02275
old locus tag: RVIR1_04640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035232.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: bifunctional methionine sulfoxide reductase B/A protein
SIO_010081: DMP02_RS02275
subclass of: SO_0000673
so part of: DMP02_RS02275
location: 484193..485061
location: region:484193-485061:1
so has part: feature:484193-485061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484193-485061:1:exon

DMP02_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02280
old locus tag: RVIR1_04650
so part of: sequence
location: 485126..485494
location: region:485126-485494:1
so has part: feature:485126-485494:1:exon
subclass of: SO_0000010

position:485126:1
position: 485126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485494:1
position: 485494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485126-485494:1:exon

DMP02_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02280
old locus tag: RVIR1_04650
inference: COORDINATES: protein motif:HMM:NF013767.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hpt domain-containing protein
translation: MTPSTLQDFVLIDIDKAIHLMGDKEFIKEIFQLFTDNLTAYLAILKQHYQARNWSAIQAIAYKWRVEASYCGANRLGKVCQQLETLLQRRLFEEAEMYYQSLLEAAVATKEAAKNAITALIN
SIO_010081: DMP02_RS02280
subclass of: SO_0000673
so part of: DMP02_RS02280
location: 485126..485494
location: region:485126-485494:1
so has part: feature:485126-485494:1:exon

WP_126322478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485126-485494:1:exon

DMP02_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02285
old locus tag: RVIR1_04660
so part of: sequence
location: complement(485625..486578)
location: region:485625-486578:-1
so has part: feature:485625-486578:-1:exon
subclass of: SO_0000010

position:485625:-1
position: 485625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486578:-1
position: 486578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485625-486578:-1:exon

DMP02_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02285
old locus tag: RVIR1_04660
inference: COORDINATES: protein motif:HMM:NF019474.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MPLNYTISEHRKFILSLQQKEKRIAAKNVIISPLFFSLENNNRLTAFIYRPFRLASNKLYPTVLHIRGTGYNADARYYAYITCSHLAEKSSCQVIDLDHRLAPEYPCPIGFNDVYASIKSIIKNSEQLKIDPEKIAISGYSSGGNFAALAAIQAKTDKLPISLQLLISPITDLSRNLKKYSNFEKKDSFPLSLAQWFITLYLQQGASNPKSPLISPYWSNDLTNLPPTYFLCGEFDRFRSDSEGYRNKLAKAHVWTHMSVFKKENHSFFWHNIRVIETMATQLRMSFNLFSIPRSITQKRISEKQEKSPDLKKSNHI
SIO_010081: DMP02_RS02285
subclass of: SO_0000673
so part of: DMP02_RS02285
location: complement(485625..486578)
location: region:485625-486578:-1
so has part: feature:485625-486578:-1:exon

WP_126322479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485625-486578:-1:exon

DMP02_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02290
old locus tag: RVIR1_04670
so part of: sequence
location: complement(486578..487384)
location: region:486578-487384:-1
so has part: feature:486578-487384:-1:exon
subclass of: SO_0000010

position:487384:-1
position: 487384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486578-487384:-1:exon

DMP02_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02290
old locus tag: RVIR1_04670
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF014414.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MYNPKNLIELYSGNDLATLFKGDFINFGYWKNVPTVISEYDVVEANKNLYHQVFQRLSLNAQDKILEIGSGHGGGCALLSSSHSIKFITGLDYLAAHTEHSQKKHSSLVKLGKLQFLQGAAESIPMPDSSINKIYTIEAFQHFNARHAIPEFYRVLSPNGKLVISTLFAKNKSCFEELLTLIPRPALLSDSSDGEIAALPEVLNLLEKYSFQNIKLENISQYVWLGYDTWVKQNDPSIWDMNWKIANEKGLLDYYIITANIKNKYKKF
SIO_010081: DMP02_RS02290
subclass of: SO_0000673
so part of: DMP02_RS02290
location: complement(486578..487384)
location: region:486578-487384:-1
so has part: feature:486578-487384:-1:exon

WP_126322480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486578-487384:-1:exon

DMP02_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02295
old locus tag: RVIR1_04680
so part of: sequence
location: 487469..487867
location: region:487469-487867:1
so has part: feature:487469-487867:1:exon
subclass of: SO_0000010

position:487469:1
position: 487469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487867:1
position: 487867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487469-487867:1:exon

DMP02_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02295
old locus tag: RVIR1_04680
EC number: 3.5.4.5
inference: COORDINATES: protein motif:HMM:NF004064.0
GO function: GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0009972 - cytidine deamination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytidine deaminase
translation: MKKYIHEMVLLAKEAALNAYVPFCKFNIGACIRTIEGKLFNGCNWENAATPLSQCAETSALSAMLTAGYKNISDIVLVTPKLVCMPCGACRQRLIQFSDSETNFYSYNMDNEQLKAIKLNELLPDKFTWELS
SIO_010081: DMP02_RS02295
subclass of: SO_0000673
so part of: DMP02_RS02295
location: 487469..487867
location: region:487469-487867:1
so has part: feature:487469-487867:1:exon

WP_126322481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487469-487867:1:exon

DMP02_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02300
old locus tag: RVIR1_04690
so part of: sequence
location: 487926..490001
location: region:487926-490001:1
so has part: feature:487926-490001:1:exon
subclass of: SO_0000010

position:487926:1
position: 487926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490001:1
position: 490001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487926-490001:1:exon

DMP02_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02300
old locus tag: RVIR1_04690
inference: COORDINATES: protein motif:HMM:NF014567.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MQNLNKSELLNIIENQQLEIKKLKNKYKKEIYTLNFILKNLPGSVYWKNKEGVYLGQNSYAKKLMHKLGFSEVVFGKTDYDLFTKVVADNFRETDLAVLSGKNLTMEEVVTLPSGKKRIFLSSKIPLPDRSKNIVGILGISIDITKRKQAEDALKLAKEKAETANQAKTEFLENMRHDIRTPISGIVGNAHLIQMQPDIPKKVTKFVDDLVQSSDALLEFLDRILESIKAESGEIPVLEHKFELKEALKQIVRLNKSQALVKGLELNLVYDQTIPSYLMGDSVRIQKIILELLTNALKYSDKGQITVSARLMKDKKREAIVELRVSDTGMGIPKDKHAEVYKRFTRLMPSYQGIPGTGLGLSTVKQFIEDLHGEIHIESDLGKGTTFICLIPLQKPLLMDDANVAELKGNVVLPKISVVTKPLTSEAAISANGNGSCVLIVEDTEVAVRVAQNVLSALGCRTEVAPDGKTALEKIEKNHYDLVLMDMGLPDGDGCDVTRRIRLQKKQPNPSVPIIGLTAHVEDAKKQLCLETGMNAVFNKPLTLKKAAEILAFTSHQQPQQIAIHNEPAEPVKATPIQDLPILDIKKAIETLGKKETVKDCLDLLASELSKELEEIKQYHNNSDWPAIRNLAHKWKGGAGYCGASRLEQVCKEIGSALKAESPEKFEILYQTLLQVAEETKEAAMKALIVE
SIO_010081: DMP02_RS02300
subclass of: SO_0000673
so part of: DMP02_RS02300
location: 487926..490001
location: region:487926-490001:1
so has part: feature:487926-490001:1:exon

WP_126322482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487926-490001:1:exon

DMP02_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02305
old locus tag: RVIR1_04700
so part of: sequence
location: complement(490060..490506)
location: region:490060-490506:-1
so has part: feature:490060-490506:-1:exon
subclass of: SO_0000010

position:490060:-1
position: 490060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490506:-1
position: 490506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490060-490506:-1:exon

DMP02_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02305
old locus tag: RVIR1_04700
inference: COORDINATES: protein motif:HMM:NF019491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dabb family protein
translation: MLQLSKPLPIDKLQTNHIVFLPFKENCSDLVITEAFSLLKNLFDTLCGISSFQYGKCADLSLDKNYIFEMAFTDCVARDHYLTHDTHIKAAEFIIPLLKNGKQSIIAFDYLKHKKFLDIHRSQFFKSATVTHTANDPCPLDEGVIYKK
SIO_010081: DMP02_RS02305
subclass of: SO_0000673
so part of: DMP02_RS02305
location: complement(490060..490506)
location: region:490060-490506:-1
so has part: feature:490060-490506:-1:exon

WP_172593963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490060-490506:-1:exon

DMP02_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02310
old locus tag: RVIR1_04720
so part of: sequence
location: complement(490835..491509)
location: region:490835-491509:-1
so has part: feature:490835-491509:-1:exon
subclass of: SO_0000010

position:490835:-1
position: 490835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491509:-1
position: 491509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490835-491509:-1:exon

DMP02_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02310
old locus tag: RVIR1_04720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSRFYSTLVRAGLAFSLVFIFAGPIKGIFASIQDTINKSNNTNIKFKDLDIDFSTNNQLSPINQMYKRDLEMAFQSPVISRDETFLIKRLIEAKLSPDDQTDVLIRLLANTRLNLFMLLIDKQVSEEQIGLLSYLNDQTIPIEQTKLLPFFKKWQKKSKNNSYAFTQFLNVLLALNLIAENVSSYTITPLGKEYLIFRVRFGHPINFDNIPSSKNKLDMGQQK
SIO_010081: DMP02_RS02310
subclass of: SO_0000673
so part of: DMP02_RS02310
location: complement(490835..491509)
location: region:490835-491509:-1
so has part: feature:490835-491509:-1:exon

WP_126322484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490835-491509:-1:exon

DMP02_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02315
old locus tag: RVIR1_04730
so part of: sequence
location: complement(491664..492395)
location: region:491664-492395:-1
so has part: feature:491664-492395:-1:exon
subclass of: SO_0000010

position:491664:-1
position: 491664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492395:-1
position: 492395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491664-492395:-1:exon

DMP02_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02315
old locus tag: RVIR1_04730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTEIILSYVAKKALNILENKFISNVVEKWSQYRARKFLQTFIAEIEKNTDFKDPTKLKNMIEEFFEDENKSEILFEAYRKVVLSASKNIGPIIIAIITAKLILEKKQSNETEDRIILAAENLSDNELISFLEFYYKKIKKENDDLEILLHEESYGESFENDLTAPPLSEWPGIWALKLKNMGILLERVTQKTRHYPASCYADKDYDAGISNDFKYYIIIPQEYQLLADYINTALKITNSKSS
SIO_010081: DMP02_RS02315
subclass of: SO_0000673
so part of: DMP02_RS02315
location: complement(491664..492395)
location: region:491664-492395:-1
so has part: feature:491664-492395:-1:exon

WP_126322485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491664-492395:-1:exon

DMP02_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02320
old locus tag: RVIR1_04740
so part of: sequence
location: complement(492495..492571)
location: region:492495-492571:-1
so has part: feature:492495-492571:-1:exon
subclass of: SO_0000663

position:492495:-1
position: 492495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492571:-1
position: 492571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492495-492571:-1:exon

DMP02_RS02320
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS02320
old locus tag: RVIR1_04740
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(492535..492537),aa:Met,seq:cat)
SIO_010081: DMP02_RS02320
subclass of: SO_0000673
so part of: DMP02_RS02320
location: complement(492495..492571)
location: region:492495-492571:-1
so has part: feature:492495-492571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492495-492571:-1:exon

DMP02_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02325
old locus tag: RVIR1_04760
so part of: sequence
location: complement(493469..494947)
location: region:493469-494947:-1
so has part: feature:493469-494947:-1:exon
subclass of: SO_0000010

position:493469:-1
position: 493469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494947:-1
position: 494947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493469-494947:-1:exon

DMP02_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02325
old locus tag: RVIR1_04760
inference: COORDINATES: protein motif:HMM:NF023321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3413 domain-containing protein
translation: MSSSAVKKAYLNWIFWFFVGNAILFWVIGLHYFAVILPFHLSTSTVVNQFIAWLFLLSAYFGQLGLFAILAAALPTLLAFIYPKKYLIFTSALISGFLIAWLLCLDTFVFSQYRFHLNGILWNLVTSGQATEVFDLSWLEWLATGLLSLLLLGLEIGLALLIWKKCSTKPFRSKYPLSLIGCLLFSYYMLALIVPVSGSLSLNQQAYTIPLYYEVLAKFLPGNRLPALESLYRQDFVEINHTNAKLHYPLHPLIYKTTQKPLNIVFILIDTWRFDMMNAVNTPNIYRFAQESWQFQRHFSGGNGTQPGIFSLFYSLPASYWTATINEHKSPVFINKLLDEGYHTGVFASATLLAPAFNQNVFSKIKNLQTTTPGDLPPDRDKRITSEFKQFVSHTSSPFFSFLFYDAAHSFCYGNSPDNPFQPSIGVCDRLTYTNHTDPTPTFNRYKNALYYIDELVGQDLALLKKQHLLDNTIVVITGDHGNEFNDNHLGY
SIO_010081: DMP02_RS02325
subclass of: SO_0000673
so part of: DMP02_RS02325
location: complement(493469..494947)
location: region:493469-494947:-1
so has part: feature:493469-494947:-1:exon

WP_126322486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493469-494947:-1:exon

DMP02_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: fis
locus tag: DMP02_RS02330
old locus tag: RVIR1_04770
so part of: sequence
location: complement(495015..495329)
location: region:495015-495329:-1
so has part: feature:495015-495329:-1:exon
subclass of: SO_0000010

position:495015:-1
position: 495015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495329:-1
position: 495329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495015-495329:-1:exon

DMP02_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: fis
locus tag: DMP02_RS02330
old locus tag: RVIR1_04770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator Fis
translation: MQNAIDQLPVLSIQASPSTDTAQQPLKTYVKRALENYFSHLTTENNLSSTPPKLDLYGLVLSEVEYPLLEIVLQQTRGNQTRAAKLLGISRGTLRKKLKQYDLA
SIO_010081: DMP02_RS02330
subclass of: SO_0000673
so part of: DMP02_RS02330
location: complement(495015..495329)
location: region:495015-495329:-1
so has part: feature:495015-495329:-1:exon

WP_126322487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495015-495329:-1:exon

DMP02_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dsbD
locus tag: DMP02_RS02335
old locus tag: RVIR1_04780
so part of: sequence
location: 495668..497245
location: region:495668-497245:1
so has part: feature:495668-497245:1:exon
subclass of: SO_0000010

position:495668:1
position: 495668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497245:1
position: 497245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495668-497245:1:exon

DMP02_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dsbD
locus tag: DMP02_RS02335
old locus tag: RVIR1_04780
EC number: 1.8.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018578032.1
GO function: GO:0047134 - protein-disulfide reductase (NAD(P)) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-disulfide reductase DsbD
translation: MLFFSKFIKIFVLGSLLGGVFTTSYADEPLPVEQVFQVTTKQLDAQTMSVHWAIKPGYYLYREKMHFESDQPIKSVVLPPGIPKHNKFLNNYQVYQSGTTVLLKFIHPLKNTLKLSIHYQGCAAAGFCYPPVTRQLTLSLQKGVGTSQSTAKGEQGKAMRLLASHNIGLILLGFFGFGLLLSLTPCVLPLIPVLSAIILGQKQQLTTLKAFSLSLTYVLAMALTYALAGVFAGLAGSYLQSFLQSPWVIIFVSLVFVFLAFSLFGFYDLQLPASWQEKLNNLTNRQQGGNYWGVALMGCLSTLVISPCITAPLVGVLTYIGNTGNAVLGGFALFILGLGSGVPLLIIGTSAGKWLPKSGPWMNGVKIVLGIMMLVMAGWLLLRIVPQNLQPFNGFKSQQAAVNGNFQAIKGIPDLNRALIKAKQENKPVLLDFYANWCISCKEMEHAVFPESQVKSLLSRFIVLRADVTANDAIDKALEKKFNVIAPPTFLFFTPDGRELNEQRIVGQLGHQAFAKHLQQVLSSK
SIO_010081: DMP02_RS02335
subclass of: SO_0000673
so part of: DMP02_RS02335
location: 495668..497245
location: region:495668-497245:1
so has part: feature:495668-497245:1:exon

WP_232019595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495668-497245:1:exon

DMP02_RS07330
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07330
so part of: sequence
location: complement(497368..497820)
location: region:497368-497820:-1
so has part: feature:497368-497820:-1:exon
subclass of: SO_0000010

position:497368:-1
position: 497368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497820:-1
position: 497820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497368-497820:-1:exon

DMP02_RS07330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07330
inference: COORDINATES: protein motif:HMM:NF013088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MSVLLMAISYAIGNLLNQRMLSGKIKLAFYANIYHQHWASLIFLILASLCFESLPSKILLLHTPLLWVASIYMGLFSTALAWIIYYHLIREWDAVRASAVMYIVPIMAILWDFIFFHNRPQWTEGLGIITILLGVILIQLPKNRRLQPTP
SIO_010081: DMP02_RS07330
subclass of: SO_0000673
so part of: DMP02_RS07330
location: complement(497368..497820)
location: region:497368-497820:-1
so has part: feature:497368-497820:-1:exon

WP_232019596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497368-497820:-1:exon

DMP02_RS07335
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07335
so part of: sequence
location: complement(497866..498288)
location: region:497866-498288:-1
so has part: feature:497866-498288:-1:exon
subclass of: SO_0000010

position:497866:-1
position: 497866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498288:-1
position: 498288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497866-498288:-1:exon

DMP02_RS07335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07335
inference: COORDINATES: protein motif:HMM:NF013088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MLNKHINYLWFFLLASFWGGSFVAIKEVVNTVPPFFGAALRVGLALFFLTIMLCCLRKKVAVPFSIRWRIWIMGLFSQGIPFFFLFWGEQHISSGLAGILNGTVPIWTLLFSLTSPRTRNFSPLKGIGLSTGLLGICIIF
SIO_010081: DMP02_RS07335
subclass of: SO_0000673
so part of: DMP02_RS07335
location: complement(497866..498288)
location: region:497866-498288:-1
so has part: feature:497866-498288:-1:exon

WP_232019597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497866-498288:-1:exon

DMP02_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: parC
locus tag: DMP02_RS02345
old locus tag: RVIR1_04800
so part of: sequence
location: complement(498293..500551)
location: region:498293-500551:-1
so has part: feature:498293-500551:-1:exon
subclass of: SO_0000010

position:498293:-1
position: 498293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500551:-1
position: 500551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498293-500551:-1:exon

DMP02_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: parC
locus tag: DMP02_RS02345
old locus tag: RVIR1_04800
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035490.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MAKTKTTELSTTEHQPLRVFTEKAYLDYSMYVILDRALPHIGDGLKPVQRRIVYAMSELGLTAVAKYKKSARTVGDVLGKFHPHGDVACYEAMVLMAQPFSYRYPLVDGQGNWGSQDDPKSFAAMRYTESRLTQYAQALLSELADGTVDWVPNFDATLEEPHLLPARLPNILLNGAAGIAVGMATDIPPHNLREIVSACIRLLDDPKTTLNDLFDHIQGPDFPSAAEIITPADEIRKIYQQGQGAVRARAVYKEENGQLIITALPYQVSGAKIIEQIAEQIREKKLSLIEDLRDESDHENPTRLVITPRSNRVDTEALMGHLFVSTDLERSYRINLNMIGLDGRPHVKNLLTILKEWLEYRQQTVRKRLEFRLEKILNRLHLLEGFLIVYLHIDEVIKIIRQHDDPKAQLIKRFKLSDVQADAILEIRLRQLAKLEEIKLRTEQKNLTAERDELEKILASNAKLKRLIRDELQKDAKLYGDERRSKLVQRNAAQAIQKTEIIPSDPVTVILSTRGWIRAAKGHDFDVNGLNFKAGDSFKMAIPGRNNQLVVFIDSTGRSYSTPIHTLPSARSSGEPLTSRFNPAPGANFQAMITGNPEQSILVASDAGYGFITQISELYSKNRNGKNLLKLATQSQVLQPRWIDNLEDNYLAIVTNSGYLLIIAAKELPILPRGKGNKIIQIPTEKLEQREEFVIDIAVLPSKNSSLDIIAGKRQVTLKASDLAHYRGKRGQRGHKLPRGLQKLDQLAVPTR
SIO_010081: DMP02_RS02345
subclass of: SO_0000673
so part of: DMP02_RS02345
location: complement(498293..500551)
location: region:498293-500551:-1
so has part: feature:498293-500551:-1:exon

WP_126322488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498293-500551:-1:exon

DMP02_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02350
old locus tag: RVIR1_04810
so part of: sequence
location: complement(500763..501356)
location: region:500763-501356:-1
so has part: feature:500763-501356:-1:exon
subclass of: SO_0000010

position:500763:-1
position: 500763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501356:-1
position: 501356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500763-501356:-1:exon

DMP02_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02350
old locus tag: RVIR1_04810
inference: COORDINATES: protein motif:HMM:NF020965.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyloxyacyl hydrolase
translation: MLKTSLYTNKELRLSSLIIALIFVCFWPKKAFAFQPGLSLSYGTGKPDHLEGYRIALQDFWPFVGFPKSALNLTGYWDLSLARWTNNPPLANQPQHISIAAISPVIRLQTQKFYFLYAQPYLELGIGASLLSNNHFGHRDLGGQFAFQDLLGIGLRWKATHAWSLSYHYVHYSNAHLLPPNQGIDVKHLFSLGYEFN
SIO_010081: DMP02_RS02350
subclass of: SO_0000673
so part of: DMP02_RS02350
location: complement(500763..501356)
location: region:500763-501356:-1
so has part: feature:500763-501356:-1:exon

WP_172593964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500763-501356:-1:exon

DMP02_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpmE
locus tag: DMP02_RS02355
old locus tag: RVIR1_04820
so part of: sequence
location: 501584..501838
location: region:501584-501838:1
so has part: feature:501584-501838:1:exon
subclass of: SO_0000010

position:501584:1
position: 501584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501838:1
position: 501838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501584-501838:1:exon

DMP02_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpmE
locus tag: DMP02_RS02355
old locus tag: RVIR1_04820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008254787.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MQQDIHPGYEVVTVTCSCGNSFKTRSTLGDANLSIEVCAKCHPFYTGKQKIVDSSGRIDKYKQKYGNRSSKAPSAKSSDTAEVA
SIO_010081: DMP02_RS02355
subclass of: SO_0000673
so part of: DMP02_RS02355
location: 501584..501838
location: region:501584-501838:1
so has part: feature:501584-501838:1:exon

WP_126322490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501584-501838:1:exon

DMP02_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02360
old locus tag: RVIR1_04830
so part of: sequence
location: 502053..503243
location: region:502053-503243:1
so has part: feature:502053-503243:1:exon
subclass of: SO_0000010

position:502053:1
position: 502053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503243:1
position: 503243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502053-503243:1:exon

DMP02_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02360
old locus tag: RVIR1_04830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034856.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTEDLLKMFSIGGVAFGNLVAFYYYAYTPMQLPVGIMMDRFGPRKLLVFASLVCALGTYLFAHHFLPTAQVGRFLVGFGSAFAFVGVLKLASLWFPPSRFAFIAGMATSLGMVGAMIGDITLSKLVVSIGSNTTLYLAAVVGVGLTIVMWLVIPETKAVKTAAASASSKLSYREFFQAVFKLCKNPQMWLIGIIGSLLYLSLSGFAEVWGIPYLIRVYGLSNVSAATAISFVFLGWAIGSPLVGWISDKMGNRRYPIILGALLGAVLFSLIIYFPSMSTHSPSMSTHSLKVLLFTFGVCSSTQIIVFPIARELNVAALAGTAIAVINSLVMLGGALSQPLIGKALDVLTGVHVKGNLMAFSTTSFQHALSIIPIAFLAAAALTFLVKETRGTIVKQ
SIO_010081: DMP02_RS02360
subclass of: SO_0000673
so part of: DMP02_RS02360
location: 502053..503243
location: region:502053-503243:1
so has part: feature:502053-503243:1:exon

WP_232019598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502053-503243:1:exon

DMP02_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02365
old locus tag: RVIR1_04840
so part of: sequence
location: complement(503334..504527)
location: region:503334-504527:-1
so has part: feature:503334-504527:-1:exon
subclass of: SO_0000010

position:503334:-1
position: 503334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504527:-1
position: 504527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503334-504527:-1:exon

DMP02_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02365
old locus tag: RVIR1_04840
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003634054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MKIMLSRRVAQIKPSPTLSLSAAANRLKASGRPIINLTVGEPDFDTPELIKQAAHQALDQGCTKYTAVDGIASLKQAIIDKFKHENQLSYVANQIIVSSGAKQCIYNLMQALLNPGDEVIIPAPYWVSYPDMALMAEAKPVFISTTIEQHLKINAEQLTKAITPQTRLLIINSPSNPSGMVYTREELSELAAVLLKNPQVFILTDDIYEHIYWGKQAFENIVNVCPELYERTIVLNGCSKAYAMTGWRIGYAAAAKEIIQAMTNIQSQSTSNPNSIAQVAAKAALTSNQDCVREMNRIYQQRHQFFSEGLNAIPGVNCLAAMGAFYCFPSFRHFIGEGKAFSSDYKLADYLLNKADIATVPGSAFGAPGHLRLSFATDDINLKNALAKLREALKDFK
SIO_010081: DMP02_RS02365
subclass of: SO_0000673
so part of: DMP02_RS02365
location: complement(503334..504527)
location: region:503334-504527:-1
so has part: feature:503334-504527:-1:exon

WP_126322492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503334-504527:-1:exon

DMP02_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: uvrB
locus tag: DMP02_RS02370
old locus tag: RVIR1_04850
pseudo: true
so part of: sequence
location: 504716..506700
location: region:504716-506700:1
so has part: feature:504716-506700:1:exon
subclass of: SO_0000010

position:504716:1
position: 504716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506700:1
position: 506700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504716-506700:1:exon

DMP02_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: uvrB
locus tag: DMP02_RS02370
old locus tag: RVIR1_04850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035446.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
SIO_010081: DMP02_RS02370
subclass of: SO_0000673
so part of: DMP02_RS02370
location: 504716..506700
location: region:504716-506700:1
so has part: feature:504716-506700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504716-506700:1:exon

DMP02_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02375
old locus tag: RVIR1_04860
so part of: sequence
location: 507128..507202
location: region:507128-507202:1
so has part: feature:507128-507202:1:exon
subclass of: SO_0000663

position:507128:1
position: 507128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507202:1
position: 507202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507128-507202:1:exon

DMP02_RS02375
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS02375
old locus tag: RVIR1_04860
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:507160..507162,aa:Val,seq:gac)
SIO_010081: DMP02_RS02375
subclass of: SO_0000673
so part of: DMP02_RS02375
location: 507128..507202
location: region:507128-507202:1
so has part: feature:507128-507202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507128-507202:1:exon

DMP02_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: thrS
locus tag: DMP02_RS02380
old locus tag: RVIR1_04870
so part of: sequence
location: 507218..509173
location: region:507218-509173:1
so has part: feature:507218-509173:1:exon
subclass of: SO_0000010

position:507218:1
position: 507218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509173:1
position: 509173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507218-509173:1:exon

DMP02_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: thrS
locus tag: DMP02_RS02380
old locus tag: RVIR1_04870
EC number: 6.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034664.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MPLITLLDSKQLTFPEPITAYQVATEISPGLARNAIAAAVDGRLVDLSYVIESDVALRILTERDTESLEVIRHSTAHLLAHAVKQLFPQAQVTIGPVIENGFYYDFAFERPFTPDDLKQIEKRMQELVKQALPVKRFTLSRTEAIERFRKMGEEYKAKIIEAIFEGEVLSLYQEGDFVDLCRGPHVPNTSKLKVFKLTRVAGAYWRGDAKNEMLQRIYGTAWFTKDDLNAYLQGIEEAEKRDHRKLGKQLELFHIQEEAPGMIFWHPKGWGIYQIIEQYIRKRLEKCGYQEIRTPQLLARQLWERSGHWDKFFKEMFTTHASENTEFAIKPMNCPGHIQVFNQGLKSYRDLPLRFSEFGCCHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIQSEVAAFIDLLYDVYADFGFNEILLKLATRPEVRVGSDESWDKAEQALAQALNDKALKWEYSVGEGAFYGPKIEFSLKDCLGRIWQCGTIQVDFSMPGRLGAEYTTEQGERKTPVMLHRAILGSFERFIAILIEHYAGHFPVWLAPIQAVVMTITDKQNDYAKAVAQELESLGLRIKLDLRNEKIGYKIREHSLQKVPYQLIIGDQEVQAKQVNVRRQGGGNLGSMSSPQPLSMSVREFEQIVKREGLVQRSRIDAEK
SIO_010081: DMP02_RS02380
subclass of: SO_0000673
so part of: DMP02_RS02380
location: 507218..509173
location: region:507218-509173:1
so has part: feature:507218-509173:1:exon

WP_126322493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507218-509173:1:exon

DMP02_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: infC
locus tag: DMP02_RS02385
old locus tag: RVIR1_04880
so part of: sequence
location: 509206..509769
location: region:509206-509769:1
so has part: feature:509206-509769:1:exon
subclass of: SO_0000010

position:509206:1
position: 509206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509769:1
position: 509769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509206-509769:1:exon

DMP02_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: infC
locus tag: DMP02_RS02385
old locus tag: RVIR1_04880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MRPRPGGAYQPRTGSSNTKKVRVNGEIRVPQVRLIGPEREQLGVLSLTEALRQAQQAGLDLVEIAPTAAPPVCRIMDYGKYLFELNKQKAAQKKKQKRIQLKEVKFRPVTEEGDYQVKLRNLIRFLEQGDKAKITVRFRGREIAHVHLGTKLIERLEKDLAAYAAIDDRPKMEGKQMVLVVSPKKTK
SIO_010081: DMP02_RS02385
subclass of: SO_0000673
so part of: DMP02_RS02385
location: 509206..509769
location: region:509206-509769:1
so has part: feature:509206-509769:1:exon

WP_126323483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509206-509769:1:exon

DMP02_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rpmI
locus tag: DMP02_RS02390
old locus tag: RVIR1_04890
so part of: sequence
location: 509807..510001
location: region:509807-510001:1
so has part: feature:509807-510001:1:exon
subclass of: SO_0000010

position:509807:1
position: 509807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510001:1
position: 510001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509807-510001:1:exon

DMP02_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rpmI
locus tag: DMP02_RS02390
old locus tag: RVIR1_04890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019234612.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MPKLKTHRGAAKRFKPTAKGYKCAQSHHNHILTKKDTKRKRNLRQTNLVHPSDVRSVDRMLQGS
SIO_010081: DMP02_RS02390
subclass of: SO_0000673
so part of: DMP02_RS02390
location: 509807..510001
location: region:509807-510001:1
so has part: feature:509807-510001:1:exon

WP_126322494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509807-510001:1:exon

DMP02_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rplT
locus tag: DMP02_RS02395
old locus tag: RVIR1_04900
so part of: sequence
location: 510033..510389
location: region:510033-510389:1
so has part: feature:510033-510389:1:exon
subclass of: SO_0000010

position:510033:1
position: 510033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510389:1
position: 510389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510033-510389:1:exon

DMP02_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rplT
locus tag: DMP02_RS02395
old locus tag: RVIR1_04900
inference: COORDINATES: similar to AA sequence:RefSeq:NP_251431.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MARVKRGVTARARHKKILKAAKGYKGARSRVIRAAKQAVTKAGQYAYRDRKQKKRDFRALWIVRINAGARENGLSYSRLIAGLAKAEIAVDRKVLADLAVTDKATFAQLVEKAKQALI
SIO_010081: DMP02_RS02395
subclass of: SO_0000673
so part of: DMP02_RS02395
location: 510033..510389
location: region:510033-510389:1
so has part: feature:510033-510389:1:exon

WP_126322495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510033-510389:1:exon

DMP02_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02400
old locus tag: RVIR1_04910
so part of: sequence
location: complement(510465..511184)
location: region:510465-511184:-1
so has part: feature:510465-511184:-1:exon
subclass of: SO_0000010

position:510465:-1
position: 510465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511184:-1
position: 511184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510465-511184:-1:exon

DMP02_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02400
old locus tag: RVIR1_04910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVIILSNEDVKLQREKLEELIKVVGFKGPIKNFKYSDYFVEELEENDTLFVICPKGPNVDIPFLDNTIISKYKKIIPVCYDDSKKENMPTCLHVKKGLYINGNPFLLNLINSLSYSLDIPNLCTDYFSQIKNIHSLQQSSENLLQIKNSLLELEKVQKPYYCAETLDHAIILDKIKTLHDVTSKTAENLHAILTSLSASQQNKIYAALKNTLLGECLEKIDLEKSQEAAPAKKSYFRL
SIO_010081: DMP02_RS02400
subclass of: SO_0000673
so part of: DMP02_RS02400
location: complement(510465..511184)
location: region:510465-511184:-1
so has part: feature:510465-511184:-1:exon

WP_126322496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510465-511184:-1:exon

DMP02_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: recR
locus tag: DMP02_RS02405
old locus tag: RVIR1_04920
so part of: sequence
location: complement(511296..511904)
location: region:511296-511904:-1
so has part: feature:511296-511904:-1:exon
subclass of: SO_0000010

position:511296:-1
position: 511296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511904:-1
position: 511904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511296-511904:-1:exon

DMP02_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: recR
locus tag: DMP02_RS02405
old locus tag: RVIR1_04920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012570215.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MAFSPLITQLMTHLRCLPGIGPKSAQRMAFHLLERARPEGLALAKTIEQAIQKIGHCEQCRSLSETQICTLCANPNRDSDLLCVVETPIDVMAIEQTASYNGYYFVLMGRLSPLDGIGPEEIGIKHFIQRIHTHPPREVILATNPTVEGEATAHYLAELLKQHHIKTSRIAHGVPLGSELEFIDGNTIIRSLHSRITIAENS
SIO_010081: DMP02_RS02405
subclass of: SO_0000673
so part of: DMP02_RS02405
location: complement(511296..511904)
location: region:511296-511904:-1
so has part: feature:511296-511904:-1:exon

WP_126322497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511296-511904:-1:exon

DMP02_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02410
old locus tag: RVIR1_04930
so part of: sequence
location: complement(511937..512296)
location: region:511937-512296:-1
so has part: feature:511937-512296:-1:exon
subclass of: SO_0000010

position:511937:-1
position: 511937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512296:-1
position: 512296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511937-512296:-1:exon

DMP02_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02410
old locus tag: RVIR1_04930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010598742.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MNMKVDLNNLLKQAQDMQSKMQSAQEELAKIVVTGETGGGLVKIDMDGRHTAKSMWLDPSLLKAILDPILLEETKKIIEELTIGAFNNALQKIEKASRQKLTDLTAQIQTKFTDSAIES
SIO_010081: DMP02_RS02410
subclass of: SO_0000673
so part of: DMP02_RS02410
location: complement(511937..512296)
location: region:511937-512296:-1
so has part: feature:511937-512296:-1:exon

WP_232019600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511937-512296:-1:exon

DMP02_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dnaX
locus tag: DMP02_RS02415
old locus tag: RVIR1_04940
so part of: sequence
location: complement(512377..513954)
location: region:512377-513954:-1
so has part: feature:512377-513954:-1:exon
subclass of: SO_0000010

position:512377:-1
position: 512377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513954:-1
position: 513954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512377-513954:-1:exon

DMP02_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dnaX
locus tag: DMP02_RS02415
old locus tag: RVIR1_04940
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005771883.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSYQVLARKYRPRSFTQLVGQESTCRILKNALDSQRIHHAYLFTGTRGVGKTSLARLLAKCLNCATKITAEPCDQCSACQAINANRFTDLLEVDAASRTKVEDTRDLLADIHYAPSQGRYKVYLIDEVHMLSSHSFNALLKTLEEPPPHVVFLLATTDPQRLPATILSRCLQFHLKALSVEQISQHLETILKNEQVPYELNALQILAQASRGSLRDSLSLLDQAIAYAKQTITEQDIKTLLGSVATTDITELLEALILQDAVKLWTIVEKLNAQAADFLQVIDALLTHLHQMALIQVLPASMTKENECIQPLAQQLSAEDTQLYYQIALLSRRDLSLAPTPRLGFEMMLLRMLAFNPIKPAEKNQSPVTKSLAPAVVSLAKDRPSIENNKLDKTQQKSALDWITLVKQLNLTGLSYTFACQCVLQKYANNQVKLLLDPKQTALHTPKQEERLAQALSKHFAQPIGLTISLGGDNLLTPARYEQQQKAQRLEETTKNLQEDPTLQAIIKTFDAKLQPESIQFLDEN
SIO_010081: DMP02_RS02415
subclass of: SO_0000673
so part of: DMP02_RS02415
location: complement(512377..513954)
location: region:512377-513954:-1
so has part: feature:512377-513954:-1:exon

WP_126322498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512377-513954:-1:exon

DMP02_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ffs
locus tag: DMP02_RS02420
so part of: sequence
location: complement(513983..514079)
location: region:513983-514079:-1
so has part: feature:513983-514079:-1:exon
subclass of: SO_0000642

position:513983:-1
position: 513983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514079:-1
position: 514079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513983-514079:-1:exon

DMP02_RS02420
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 676208
nc RNA class: SRP_RNA
gene: ffs
locus tag: DMP02_RS02420
product: signal recognition particle sRNA small type
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00169
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DMP02_RS02420
subclass of: SO_0000673
so part of: DMP02_RS02420
location: complement(513983..514079)
location: region:513983-514079:-1
so has part: feature:513983-514079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513983-514079:-1:exon

DMP02_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02425
old locus tag: RVIR1_04950
so part of: sequence
location: complement(514090..514179)
location: region:514090-514179:-1
so has part: feature:514090-514179:-1:exon
subclass of: SO_0000663

position:514090:-1
position: 514090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514179:-1
position: 514179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514090-514179:-1:exon

DMP02_RS02425
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 676208
locus tag: DMP02_RS02425
old locus tag: RVIR1_04950
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(514143..514145),aa:Ser,seq:gga)
SIO_010081: DMP02_RS02425
subclass of: SO_0000673
so part of: DMP02_RS02425
location: complement(514090..514179)
location: region:514090-514179:-1
so has part: feature:514090-514179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514090-514179:-1:exon

DMP02_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02430
old locus tag: RVIR1_04960
so part of: sequence
location: 514474..516048
location: region:514474-516048:1
so has part: feature:514474-516048:1:exon
subclass of: SO_0000010

position:514474:1
position: 514474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516048:1
position: 516048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514474-516048:1:exon

DMP02_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02430
old locus tag: RVIR1_04960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035858.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 3
translation: MLEPEIQARRTFAIISHPDAGKTTLTEKLLLWGGVIQLAGTVKARKAAHHATSDWMALEKERGISVTTSVMQFPYQGCIFNLLDTPGHADFSEDTYRTLTAVDSALMVIDAAKGVEPRTQKLLEICRLRQIPILTFINKMDREARLPIELLDDIESTLGISCAPMTWPIGMGKQFKGIYHIPEDKIYFYASSSNLKRKEGECFSGLDDPIVKERIGFLYQELQDELALVRGVCPVFNEQAYRDGKLTPVFFGSAINNFGIQELLAAFVKFAPFPQSRQADTRLVKPEEPSFSGFVFKIQANMDPAHRDRIAFLRLCSGKYTPGMKLYHVRTQRELMVNNALTFMAGDRSRADEAWPGDIIGLHNHGTIRIGDSFTAGETLKFIGIPSFSPELFQRVRLKDPLKSKALLKGLVQLSEEGAIQIFRPLASSDLILGAIGVLQFDVVAYRLKYEYKVECAYEPINVVTARWVSCHDAKRLEEFKTKALMHLAVDSKENLAYLAPSNVNLNLTIERWPEIHFSKLMEV
SIO_010081: DMP02_RS02430
subclass of: SO_0000673
so part of: DMP02_RS02430
location: 514474..516048
location: region:514474-516048:1
so has part: feature:514474-516048:1:exon

WP_126322499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514474-516048:1:exon

DMP02_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02435
old locus tag: RVIR1_04970
so part of: sequence
location: 516094..517308
location: region:516094-517308:1
so has part: feature:516094-517308:1:exon
subclass of: SO_0000010

position:516094:1
position: 516094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517308:1
position: 517308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516094-517308:1:exon

DMP02_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02435
old locus tag: RVIR1_04970
inference: COORDINATES: protein motif:HMM:NF014567.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MQKDKGLLSSAIKIAREAIKAERAKSELIANLSYELRTALTSIMGTAQLLTMDCLLPTQQQYVTDILNVSDAILPLVNRLLNLSEQETQQMRQSARPFNLKTLLEKVIKQLLFQAKSKGLQVLLDYPSHVPVNVIGAPDLIYQMVIHLSHYLMKNMQHGSIVIQVNCEQSQDEQEPDQFKLSIKDGGQGIQKQDLIRLKACLDQFDPSYIRDYRGIDLGMSITLTYIKLLNVTLEIASEAEKGGFFVCNIPLRRIINSLDEKIEVQPKSLSLGTSELRILLIEDNNLIQRVYRAVLESIEGCSVDSAMNAQMALEYYMQYSYDLIFMDICLPDSSGIELTQIIRQQEAKGERIPIIAITAHGDAKDKTRFLAAGMDEVVIKPISLEAIMSILERWTSLTTLSLA
SIO_010081: DMP02_RS02435
subclass of: SO_0000673
so part of: DMP02_RS02435
location: 516094..517308
location: region:516094-517308:1
so has part: feature:516094-517308:1:exon

WP_126322500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516094-517308:1:exon

DMP02_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: minC
locus tag: DMP02_RS02440
old locus tag: RVIR1_04980
so part of: sequence
location: complement(517305..518027)
location: region:517305-518027:-1
so has part: feature:517305-518027:-1:exon
subclass of: SO_0000010

position:517305:-1
position: 517305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518027:-1
position: 518027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517305-518027:-1:exon

DMP02_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: minC
locus tag: DMP02_RS02440
old locus tag: RVIR1_04980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035077.1
GO function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MNSLMGASKESFKLKASLFTLTTLHLFNADPLFIQQQLKSLIEQTPHFFQQLPVILDFSALKNNAEQTIDFPGIISCLRRSGVIPVGIRGGNAEQQTLAIQAGLTILPNVKLENTDTTPKPSSAPTATAKLITQPVRSGQQIYAKNADLIVLASVSPGAELLADGNIHIYGRLKGRALAGVTGNQNTHIFCKHLEAELVAIAGHYWLSEDLHDLEQTQALAKDGVHISLHQERLQIKTLN
SIO_010081: DMP02_RS02440
subclass of: SO_0000673
so part of: DMP02_RS02440
location: complement(517305..518027)
location: region:517305-518027:-1
so has part: feature:517305-518027:-1:exon

WP_126322501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517305-518027:-1:exon

DMP02_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02445
old locus tag: RVIR1_04990
so part of: sequence
location: 518211..519872
location: region:518211-519872:1
so has part: feature:518211-519872:1:exon
subclass of: SO_0000010

position:518211:1
position: 518211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519872:1
position: 519872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518211-519872:1:exon

DMP02_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02445
old locus tag: RVIR1_04990
inference: COORDINATES: protein motif:HMM:NF012711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MEKIWLNRYQQQVPSEIDPDIYPSLNALFTDSCQKFKNLPALNFFNTSISYQKWAMLSEQLAAYLQKQLNLKKGGRVALMLPNCPQYMVCVFAVLQAGLTVVNVNPLYTPSELIQQIKHSQAETIVILENFLPKLSQGLKETHVKHVISSELGDLLPWWRSWVISWFVRRTIKNSPKAKSHFPTIKFSRCLKEANNLHYQPPSLQNQDIAFLQYTGGTTGTPKAAMLTHRNMLANIEQLTAWVRPILKEGSETMITALPLYHIFSLMVNGLMGLRLGATNVLIPDARNIRQLISVLGKQHFSVLLGVNTLFRALLKKPAFSQLDFSSLKIALGGGAPLQDVVKKRWKEVTGKLLLEGYGLTEASPVVCAPPWDLVTAGNHVGLPLPSTDIRLCDTQEREVPLGEVGELCVKGPQVMKAYWTAGVEETIPIFDSEGWLLTGDLARLDQQGFVFIVGRKKELILVSGFNVYPGEIEEVIQKNSKVSEAAVLGIPSESTGEAVKAFVVRRDNTLTVEELLSYCRQYLSAYKVPTQISFLDYLPKSSLGKILKKQLK
SIO_010081: DMP02_RS02445
subclass of: SO_0000673
so part of: DMP02_RS02445
location: 518211..519872
location: region:518211-519872:1
so has part: feature:518211-519872:1:exon

WP_126322502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518211-519872:1:exon

DMP02_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02450
old locus tag: RVIR1_05000
so part of: sequence
location: complement(520094..521512)
location: region:520094-521512:-1
so has part: feature:520094-521512:-1:exon
subclass of: SO_0000010

position:520094:-1
position: 520094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521512:-1
position: 521512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520094-521512:-1:exon

DMP02_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02450
old locus tag: RVIR1_05000
inference: COORDINATES: protein motif:HMM:NF020110.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MYTILSIRRFLLFNLVTTVIAMIIITALGNYYIDNQAINETLDSSLVETGSLIKTIMHTPDLAIPAKLQAIQSQLNAHPSLKKALIEEDKFKLDEIIKENNRYKFQLWDSDGKLLLNSPQAPTIPLIGKPGLSNKIIAGNKWRTFTIYDHQQGLILAIGEKHTSRYTLIRHMLIDDAYLTLLVYPLSGLFIWLIIGSSLKSIRFFAKELAERAADHLEPVNLNEIPIEISPLADELNKLFSRLQQAFEREQRFAADAAHELHTPLAALKTQAQLALKAADPQECYTHLKQVIAGVDRCTHVIQQLLTLCRLSPETIMPEHFTQINLARIAAEAVAQLAPQAILKQIEIELVATDSEYKLLGNATGLHVLIRNLVDNAIRYTPHGGMVKVVILNLPHAIHLHVIDNGPGIPEKLRSRVFERFFRVLGNNAQGSGLGLAIVEQIAKLHHGSIHLDQPATETGLKVEVRFPRDKN
SIO_010081: DMP02_RS02450
subclass of: SO_0000673
so part of: DMP02_RS02450
location: complement(520094..521512)
location: region:520094-521512:-1
so has part: feature:520094-521512:-1:exon

WP_126322503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520094-521512:-1:exon

DMP02_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02455
old locus tag: RVIR1_05010
so part of: sequence
location: complement(521512..522183)
location: region:521512-522183:-1
so has part: feature:521512-522183:-1:exon
subclass of: SO_0000010

position:522183:-1
position: 522183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521512-522183:-1:exon

DMP02_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02455
old locus tag: RVIR1_05010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035890.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRILLVEDDESLGDGIYKGLKHYGYTVDWLKDGKTALSFIKAESFDVILLDLNLPGLAGLSVLSEMRAAGITTPVLILTARHAVEDRIKGLDGGADDYLTKPFDLDELSARIRALQRRFSSNRAVSVLTYRDIQLDPSSFSVTAKGQAINLSRREFSLLQKLLENAGHVISRDSLNQCLYGWDDEIDSNTLEVHVHNIRKKLAGINFIRTIRGVGYMAEKENN
SIO_010081: DMP02_RS02455
subclass of: SO_0000673
so part of: DMP02_RS02455
location: complement(521512..522183)
location: region:521512-522183:-1
so has part: feature:521512-522183:-1:exon

WP_126322504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521512-522183:-1:exon

DMP02_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ligA
locus tag: DMP02_RS02460
old locus tag: RVIR1_05020
so part of: sequence
location: complement(522461..524482)
location: region:522461-524482:-1
so has part: feature:522461-524482:-1:exon
subclass of: SO_0000010

position:522461:-1
position: 522461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524482:-1
position: 524482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522461-524482:-1:exon

DMP02_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ligA
locus tag: DMP02_RS02460
old locus tag: RVIR1_05020
EC number: 6.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035553.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MPKPSPALIKKITALKKKINEHNYRYHILDDPQISDVSFDKLFRELQTLEKQHPELITQDSPTQRIGATPLTSFNQIEHAMPMLSLDNAFSDQEVLAFNKRIQDRLGCDKAIEYACEPKLDGIAVSLTYQHGKLIRAATRGDGNIGEDITLNSRTILSIPLQLRGSDYPDTLEVRGEVYMPKKAFQQLNQKLQQAGEKTFVNPRNAAAGSLRQLDPKITAQRALAFFTHSVGAVKKGQLADKHTAILQQFEQWGLPCCPQTQRAQGIEACLDYYHKMGAQRPQLPYEIDGVVYKVNALALQQRLGFISRAPRWALAHKFPAQEELSRVLAIEFQVGRTGALTPVARLEPVFVGGATVSNATLHNIDEVNRKDIRVGDTIVVRRAGDVIPEVVRVIKEKRPQHTHRIQLPKNCPACGSEVTKLASESVARCNGGLYCPAQLKEAIKHFASRKAMNIEGLGNKIVDQLVEKSLIKDVADVYTLTTIQLAGLERLGEKSAAKLCRAIAASKNTSFSRFLYALGIRDVGISTALNLAQHFQQLQPLMQTDETYLQSISDIGPIVATHIKKFFTQTHNKEIIQRLLAAGIHWPKPTLNKKQTPLAGKTFVLTGSLNDLSREEATHQLQEQGAKVSSSVSKKTNYVVVGKDPGSKFSQAKKLGVTCLTEAELQTLLRSL
SIO_010081: DMP02_RS02460
subclass of: SO_0000673
so part of: DMP02_RS02460
location: complement(522461..524482)
location: region:522461-524482:-1
so has part: feature:522461-524482:-1:exon

WP_126322505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522461-524482:-1:exon

DMP02_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: zipA
locus tag: DMP02_RS02465
old locus tag: RVIR1_05030
so part of: sequence
location: complement(524475..525137)
location: region:524475-525137:-1
so has part: feature:524475-525137:-1:exon
subclass of: SO_0000010

position:524475:-1
position: 524475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525137:-1
position: 525137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524475-525137:-1:exon

DMP02_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: zipA
locus tag: DMP02_RS02465
old locus tag: RVIR1_05030
inference: COORDINATES: protein motif:HMM:TIGR02205.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0000917 - division septum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZipA
translation: MDIDYLLIILPGIVFLGFLGLILVIWQYGDFRSKKEDEDDDKILSTMPSKNLYKTIPHYSSREEEEASILDKSMSEINIKETSANGTESLIILHLLAAEERPYAGYELVQTLSSAGFYYGAMNIFHYYEDQNEKSARLFSLASAVEPGTFDLTHIAEILAPGLCLFMSLKDKNALANFELMLETAQLLIQDLGGQLCDGQRQPLTDYVLTHYRSKLYSYA
SIO_010081: DMP02_RS02465
subclass of: SO_0000673
so part of: DMP02_RS02465
location: complement(524475..525137)
location: region:524475-525137:-1
so has part: feature:524475-525137:-1:exon

WP_126322506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524475-525137:-1:exon

DMP02_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: smc
locus tag: DMP02_RS02470
old locus tag: RVIR1_05040
so part of: sequence
location: complement(525297..528827)
location: region:525297-528827:-1
so has part: feature:525297-528827:-1:exon
subclass of: SO_0000010

position:525297:-1
position: 525297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528827:-1
position: 528827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525297-528827:-1:exon

DMP02_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: smc
locus tag: DMP02_RS02470
old locus tag: RVIR1_05040
inference: COORDINATES: protein motif:HMM:TIGR02168.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome segregation protein SMC
translation: MRLESIKLAGFKSFVDPTTLAFPSNLTAIVGPNGCGKSNIIDAIRWVMGESSAKQLRGQSLDDVIFNGCTTRKPLGQAAIELNFDNSDGGLGGQYSSYAQISIRREITREGQSIYYLNGSRCRRRDIRDIFLGTGLGPRSYAIIEQGMISRVVEAKPDELRAYIEEAAGISKYKERRRETENRLEHTQENLNRLNDLREELAKQAKHLQRQANAAERYKNFKEEERLLKAHLQALRYRTLNNQLQSQLITIAETEAQLNETQGQQQTLLKELSHDRDQQNIIRTGCDTLQNRYYELGNEITRLEEKLRSQTAQFKQNQQEESELRQKNIFLEQQSQENQALQNRLNQEIAILHEEWASTQETTEQSQTALKQSELDLKNCQLQWEEFQAHAAQLTQQNRVAQTQHQHYQQQSAMLKKRIERLEQEQMEQNQILGNDNDMADLTVALTESQQKQASAQLEQTQTAQQINAQRMALQQLAKELDHCKSQLQKNQGHTASLMALQQEALGQREESLLGWLKKHNLSEHPRLAQLVQVETGWERAVEVALNQHIQAVCLTDRDSLDDFFNQSLPDSSVSLMAKSTPCEHTSLQFESQLPLPRLSTKLTAPWPLDNLLAGVYVAETLSEALTHSKQLKGYESIITREGVCLGNHWLSLSNNNTVQTGLLQREREINTLQKEQHAIQTQIDTQQADYTTKQKQLKALEEKLIEKQKQLSELLSGHADLKARHQIKEARLSQAKQRLQRIQQELQENKAQCDKMEIKWQQIRQEQISTQAQLDEVQPQREALLENKTQLQKKLSDATQKAKADESQRHQLELRKQTAEHQFKTLEETIARLQQQQTQLKERVSHLQQTLAGAESPLHAIKQQLDSLNDQRYTLANKLKQSQATLQDIEQRLKHKEQQTQTLETDLSLDRDDLEQRRLQCQELRVRAKTLEEQLHEQAYEVETLLKELPDEADISSYETQLSEITQRIEQIGAVNLAALEEHQSVSERKIYLDAQHQDLEQALETLKTAIQKMDKETRSRFKETFDKINQNFKDLFPRLFSGGEASLQLQDPDLLSSGICIMAQPPGKRNSSIQLLSGGEKALTATALVFSFFQLNPAPFCMLDEVDAPLDDTNVLRFCKLVKEMATDVQFIFISHNKVAIEMAQHLAGVTMHEPGVSRLVTVDIEKAIAIASA
SIO_010081: DMP02_RS02470
subclass of: SO_0000673
so part of: DMP02_RS02470
location: complement(525297..528827)
location: region:525297-528827:-1
so has part: feature:525297-528827:-1:exon

WP_126322507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525297-528827:-1:exon

DMP02_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02475
old locus tag: RVIR1_05050
so part of: sequence
location: complement(528981..529274)
location: region:528981-529274:-1
so has part: feature:528981-529274:-1:exon
subclass of: SO_0000010

position:528981:-1
position: 528981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529274:-1
position: 529274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528981-529274:-1:exon

DMP02_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02475
old locus tag: RVIR1_05050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597546.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine zipper 2TM domain-containing protein
translation: MKKFNSFLLIGVALVGLTACDSMSPDQRAVAGGLGGAAVGGLLGNAIGGGTGRTVATIAGAGIGAVAGSSLGRGTGNNSQQQVRYYRGQDGRYYPVR
SIO_010081: DMP02_RS02475
subclass of: SO_0000673
so part of: DMP02_RS02475
location: complement(528981..529274)
location: region:528981-529274:-1
so has part: feature:528981-529274:-1:exon

WP_126322508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528981-529274:-1:exon

DMP02_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: dut
locus tag: DMP02_RS02480
old locus tag: RVIR1_05070
so part of: sequence
location: 529435..529890
location: region:529435-529890:1
so has part: feature:529435-529890:1:exon
subclass of: SO_0000010

position:529435:1
position: 529435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529890:1
position: 529890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529435-529890:1:exon

DMP02_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: dut
locus tag: DMP02_RS02480
old locus tag: RVIR1_05070
EC number: 3.6.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001298007.1
GO function: GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dUTP diphosphatase
translation: MKNIQLKILDARLGQDFPLPAYATDGSAGLDLRACLAATVQLLPNQVELIPTGLAMHIAQPDMAAVILPRSGLGHKNGIVLGNLIGLIDSDYQGELKISCWNRGKDSFAIQPGDRIAQLVFVPIVRTQFDVVPEFIESERGQGGFGHSGVQ
SIO_010081: DMP02_RS02480
subclass of: SO_0000673
so part of: DMP02_RS02480
location: 529435..529890
location: region:529435-529890:1
so has part: feature:529435-529890:1:exon

WP_126322509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529435-529890:1:exon

DMP02_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02485
old locus tag: RVIR1_05080
so part of: sequence
location: complement(529928..530845)
location: region:529928-530845:-1
so has part: feature:529928-530845:-1:exon
subclass of: SO_0000010

position:529928:-1
position: 529928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530845:-1
position: 530845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529928-530845:-1:exon

DMP02_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02485
old locus tag: RVIR1_05080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHKNKNYLTKKIAKNWNNVVLPTEEIILTRTPEEIYNKKIIKPLLDTYIKNIKQNINLYKENKELKIILNERITCIENFVKLKKILANKPYAHKQDKNNPFFDKEKNSLIQLIKELIKHNHYIQTNKIRLAIYQIPEDHIQPLIFNILAEAFNHLATLDWNSMALNPTDPNPEEFYPTCLSVLNAYETSLRYLKAERECLSNVDMRILCDEKILNTLDNIGATIYESFKTYNVLLSMNPLLKKEKELNTIENKSDIPPKQPPVTRKKRLVKDIVQTNRDCGFFKCKKSKRLPIKQATKRQTNQCP
SIO_010081: DMP02_RS02485
subclass of: SO_0000673
so part of: DMP02_RS02485
location: complement(529928..530845)
location: region:529928-530845:-1
so has part: feature:529928-530845:-1:exon

WP_126322510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529928-530845:-1:exon

DMP02_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02490
old locus tag: RVIR1_05090
so part of: sequence
location: 531101..531892
location: region:531101-531892:1
so has part: feature:531101-531892:1:exon
subclass of: SO_0000010

position:531101:1
position: 531101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531892:1
position: 531892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531101-531892:1:exon

DMP02_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02490
old locus tag: RVIR1_05090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVHQSLDSYLSSPSGEEDVNNRMLAAEEAIARFEQEHSRAMYQAFVERVPVEHQLTNETFDKHSFCEEEEDALPEPPYLAFKIAFVEARYDLKCAEQTLKSLRDSYRKEKSLELAANAKGKGDEAYKRFVGYREKEFYPALQYYKDARKAYFKAFIARQFNWLKHFVHTIKEICVRFIIKPIKNSWKSFNRPVYFVSEVSYDRETACIVEEKQNDKQEQLFKTLHSTLEKMQNGVENKKETTEEAKPVPEIEIVADGIRYRQR
SIO_010081: DMP02_RS02490
subclass of: SO_0000673
so part of: DMP02_RS02490
location: 531101..531892
location: region:531101-531892:1
so has part: feature:531101-531892:1:exon

WP_126322511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531101-531892:1:exon

DMP02_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02495
old locus tag: RVIR1_05100
so part of: sequence
location: complement(531873..532856)
location: region:531873-532856:-1
so has part: feature:531873-532856:-1:exon
subclass of: SO_0000010

position:531873:-1
position: 531873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532856:-1
position: 532856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531873-532856:-1:exon

DMP02_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02495
old locus tag: RVIR1_05100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034951.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter associated domain-containing protein
translation: MQTPISDDKRQRKKNRQSLLKRFNQLLSRGPRNREQLVQQLRTSKQRKLLDAQALKMIEGVLQISDRHVRDIMIPRAKITVISDTTSLPELLPIVIDSGHSRFPVIGNSNKEVIGLLLAKDLLKYNPLVHSQQLDFRQGAAKTKPPEGIKIHEDGKLSGNTAEDSSAQSAHQDNFNIRDIIRPAVFIPESKRLDSLLEEFQHKHYHMAIVVDEYGAVSGLVTIEDVLEEIVGEIEDEYDDNEEVFVQKQTEHQFLVKALMPIEAFNHYFSSDFTTEQFDTIGGFIANRFGYLPKRGASITLAPLHFKVLRADNRQIRLLQVTNAVDT
SIO_010081: DMP02_RS02495
subclass of: SO_0000673
so part of: DMP02_RS02495
location: complement(531873..532856)
location: region:531873-532856:-1
so has part: feature:531873-532856:-1:exon

WP_232019601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531873-532856:-1:exon

DMP02_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ybeY
locus tag: DMP02_RS02500
old locus tag: RVIR1_05110
so part of: sequence
location: complement(532837..533259)
location: region:532837-533259:-1
so has part: feature:532837-533259:-1:exon
subclass of: SO_0000010

position:532837:-1
position: 532837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533259:-1
position: 533259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532837-533259:-1:exon

DMP02_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ybeY
locus tag: DMP02_RS02500
old locus tag: RVIR1_05110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035653.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MTRRSFIPNRYYFQRWVNKALINRTRLSEITIRLVDRKESTDLNEAFRHKKGPTNILSFPFEPPPEVYSPLLGDLVIYAGLVNQEAKQQKKTRLAHWAHLVIHGCLHLIGYDHENEKDATKMETLEIQLLQELGYANPYL
SIO_010081: DMP02_RS02500
subclass of: SO_0000673
so part of: DMP02_RS02500
location: complement(532837..533259)
location: region:532837-533259:-1
so has part: feature:532837-533259:-1:exon

WP_232019602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532837-533259:-1:exon

DMP02_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02505
old locus tag: RVIR1_05120
so part of: sequence
location: complement(533276..534247)
location: region:533276-534247:-1
so has part: feature:533276-534247:-1:exon
subclass of: SO_0000010

position:533276:-1
position: 533276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534247:-1
position: 534247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533276-534247:-1:exon

DMP02_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02505
old locus tag: RVIR1_05120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PhoH family protein
translation: MNTQPEPYSFQLSPEDNHRLANLCGPFDQHLRQIEQQLNVSIYNRGHDFQINGPMPSVEVAAKVLHHLYEETQGKTTLTPNNIHLALQTLQTGSSAPQETNSTAEVSIQTRRGIIKSCSPNQARYLKNILSHDISFGLGPAGTGKTYLAVAALEKEKVSRIILVRPAVEAGEKLGFLPGDFSQKLDPYFRPLYDALNEMLGFEQVLQCVEQHIIEVVALAYMRGRTLNDAFIILDEAQNTTKEQMKMFLTRIGFNSKVVINGDITQTDLPRGVKSGLGHSLAILQGIKGISFTEFDSPDIVRHSLVQAILHAYAQYENQKKAD
SIO_010081: DMP02_RS02505
subclass of: SO_0000673
so part of: DMP02_RS02505
location: complement(533276..534247)
location: region:533276-534247:-1
so has part: feature:533276-534247:-1:exon

WP_126322513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533276-534247:-1:exon

DMP02_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: miaB
locus tag: DMP02_RS02510
old locus tag: RVIR1_05130
so part of: sequence
location: complement(534244..535572)
location: region:534244-535572:-1
so has part: feature:534244-535572:-1:exon
subclass of: SO_0000010

position:534244:-1
position: 534244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535572:-1
position: 535572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534244-535572:-1:exon

DMP02_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: miaB
locus tag: DMP02_RS02510
old locus tag: RVIR1_05130
EC number: 2.8.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233140.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
translation: MLKKLYIETHGCQMNEYDSDSMANLLHHSHGLTLTKDPSEADVLLLNSCSIREKAEEKVFSQVGQFRKIKNRHPHVIIGVGGCVASQEGAGIRQRAPYVDIVFGPQTLHRLPQLINHVLEQKRPIVDISFPEIEKFDHLPAPRAEGVRAFVSIMEGCNKYCSFCVVPYTRGEEISRPLDDVLAEVVALSEQGVREITLLGQNVNDYQGPRHEGGLADLADLIRYIAALDGINRIRFTTSHPLAFSERLIQAYADIPKLANHLHLPVQSGSDRILAAMKRGYTALEFKSKMRKLRKVRPDISISSDFIIGFPGETEDDFRATLNLVESVGIDHSFSFIYSRRPGTPAAELPDNVPPEIKKQRLQILQNLLVFQGRAISEKMLGKVEQILVDGPSKKNDDVLQGRTENNRVVNFKGNTRLIGHIVPVTITEVLKNSLRGELVIA
SIO_010081: DMP02_RS02510
subclass of: SO_0000673
so part of: DMP02_RS02510
location: complement(534244..535572)
location: region:534244-535572:-1
so has part: feature:534244-535572:-1:exon

WP_126322514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534244-535572:-1:exon

DMP02_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gatB
locus tag: DMP02_RS02515
old locus tag: RVIR1_05150
so part of: sequence
location: complement(535796..537247)
location: region:535796-537247:-1
so has part: feature:535796-537247:-1:exon
subclass of: SO_0000010

position:535796:-1
position: 535796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537247:-1
position: 537247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535796-537247:-1:exon

DMP02_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gatB
locus tag: DMP02_RS02515
old locus tag: RVIR1_05150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035852.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MAEKKNAGAWIPTIGLEVHAQLATQSKLFSGAATAYGSDPNTQACPIDLALPGVLPVLNAEAVNMAVKFGLSIEADIPSYSVFARKNYFYPDLPKGYQISQHEHPIVGNGQLTIELENGEHKLVRITRAHLEEDAGKSIHEGLEDLSGIDLNRAGVPLLEIVSEPDLASPKEAVAYLKTLHTLVRYLEICDGNLQEGSFRCDANVSVRRENGPLGTRVEIKNLNSFRFVEKAIQYEIDRQIQVLENGGAIQQETRLYDSDKQETRTMRSKENANDYRYFADPDLCPVVLSTDFIDALRQKLPELPHKKTQRFQEAYELSAYDASLLTSSRELADYFERVAQQSLPAKLAANWVMGELSAALNKDNLNISESPLSAERLAGLLKRIADNTISSKIAKDIFPMLWESKKTTDDIIQEQGLRQVTDQTAIAKIIDEVLAAHPQQLSDYRAGRDKLYGFFVGQVMKASGGKLNPQQLNALLKQKLDQ
SIO_010081: DMP02_RS02515
subclass of: SO_0000673
so part of: DMP02_RS02515
location: complement(535796..537247)
location: region:535796-537247:-1
so has part: feature:535796-537247:-1:exon

WP_126323486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535796-537247:-1:exon

DMP02_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gatA
locus tag: DMP02_RS02520
old locus tag: RVIR1_05160
so part of: sequence
location: complement(537412..538866)
location: region:537412-538866:-1
so has part: feature:537412-538866:-1:exon
subclass of: SO_0000010

position:537412:-1
position: 537412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538866:-1
position: 538866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537412-538866:-1:exon

DMP02_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gatA
locus tag: DMP02_RS02520
old locus tag: RVIR1_05160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035053.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
translation: MHTATLTELSIALKNKKISSRELTEHFLARIKQYDPALNSFITVTAEQALQQADHADERYSKGTAGPLTGIPIAHKDIFCTDGIKTSCASQMLDNFIAPYDASLVTAFKQAGTVLLGKTNMDEFAMGSSNETSFYGSVKNPWDLARVPGGSSGGSSAAVAARLTPAATGTDTGGSIRQPAALCNLTGLKPTYGRVSRYGLIAFASSLDQAGPMTQTAEDAALLMNVMAGFDKKDSTSMDEPVPDYTQSLNDSLEGLKIGLPKEYFSADLDPKIAACIKKAIKHYESLGASIHAVSLPNCHLVIPLYYIIASAECSSNLARYDGIRYGYRCNNPKDLRDLYERTRAEGFGDEVKRRILMGTYVLSAGYYDAYYIKAQKIRALMIQDFAQAFKQVDILIGPTTPSTAFKLGEKTKDPVSMYLSDIYTIAVNLAGLPAVSIPAGFNDGLPVGMQLISPAFTEAKLLNVAHRYQQITDWHKELPENFK
SIO_010081: DMP02_RS02520
subclass of: SO_0000673
so part of: DMP02_RS02520
location: complement(537412..538866)
location: region:537412-538866:-1
so has part: feature:537412-538866:-1:exon

WP_126322515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537412-538866:-1:exon

DMP02_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: gatC
locus tag: DMP02_RS02525
old locus tag: RVIR1_05170
so part of: sequence
location: complement(538883..539170)
location: region:538883-539170:-1
so has part: feature:538883-539170:-1:exon
subclass of: SO_0000010

position:538883:-1
position: 538883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539170:-1
position: 539170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538883-539170:-1:exon

DMP02_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: gatC
locus tag: DMP02_RS02525
old locus tag: RVIR1_05170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597313.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
translation: MTITLDDVNKVAKLASLKINAEEAAHYLENLQGILKLANQMETVATESIQAVAHCFDVPQCLRSDEVTETNQRDRLQQLTEQVQSGLYCVPPVIE
SIO_010081: DMP02_RS02525
subclass of: SO_0000673
so part of: DMP02_RS02525
location: complement(538883..539170)
location: region:538883-539170:-1
so has part: feature:538883-539170:-1:exon

WP_126322516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538883-539170:-1:exon

DMP02_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02530
old locus tag: RVIR1_05180
so part of: sequence
location: 539302..540342
location: region:539302-540342:1
so has part: feature:539302-540342:1:exon
subclass of: SO_0000010

position:539302:1
position: 539302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540342:1
position: 540342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539302-540342:1:exon

DMP02_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02530
old locus tag: RVIR1_05180
inference: COORDINATES: similar to AA sequence:RefSeq:NP_820454.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MLSKFRGLFSKDISIDLGTANSLIYVRGEGIVLNEPSVVAIRMEEGNQRSVLAVGWEAKRMLGRTPGNINAIRPLKDGVIADFFVTEKMLQHFIHKVHQNRFLRPAPRILICVPCGSTQVERRAIRESALGAGAREVYLIEEPMAAAIGAGMPVDEARGSLVVDIGGGTTEVAVISLGGVVYAQSVRIGGDRFDEAIVNYVRRTYGSLIGEPTAERIKHEIGTAFALPELREMEIRGRNISEGVPRAFVLTSNEILEALQEPLSNIIGAIRTGLEQTPPELAADISERGMVLTGGGALLRNLDRLITEETGMPVVVAEDPLTCVARGGGRALEIIDEMGGGFLVKD
SIO_010081: DMP02_RS02530
subclass of: SO_0000673
so part of: DMP02_RS02530
location: 539302..540342
location: region:539302-540342:1
so has part: feature:539302-540342:1:exon

WP_126322517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539302-540342:1:exon

DMP02_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mreC
locus tag: DMP02_RS02535
old locus tag: RVIR1_05190
so part of: sequence
location: 540361..541224
location: region:540361-541224:1
so has part: feature:540361-541224:1:exon
subclass of: SO_0000010

position:540361:1
position: 540361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541224:1
position: 541224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540361-541224:1:exon

DMP02_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mreC
locus tag: DMP02_RS02535
old locus tag: RVIR1_05190
inference: COORDINATES: protein motif:HMM:TIGR00219.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MLFNQGRTPLWLRLGFFIVLSILLLLLDYHHYLPSLRRVLNNAAAPLQYVIDAPLRFLNKVDQSVTTQSVLRTDNIKLQSQQLFLEAKLQRFDALESENRQLNQLLSASEHLKKQRIELARLLLVNADPLLNEVLLDKGQNDGVYIGQPVIDADGIMGQVISVDLLTSRVLLLTDFRSAIPVQDVRSDARGILVGRGRLAKLTLRDTPGTVDIKVNDLLVTSGLGGHYPPGYPVGLVSSVNMNVAAQFASIQVTPSAQLNRNRPVLLIWPDKSSGTATKVVSPHSKK
SIO_010081: DMP02_RS02535
subclass of: SO_0000673
so part of: DMP02_RS02535
location: 540361..541224
location: region:540361-541224:1
so has part: feature:540361-541224:1:exon

WP_126322518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540361-541224:1:exon

DMP02_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mreD
locus tag: DMP02_RS02540
old locus tag: RVIR1_05200
so part of: sequence
location: 541355..541840
location: region:541355-541840:1
so has part: feature:541355-541840:1:exon
subclass of: SO_0000010

position:541355:1
position: 541355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541840:1
position: 541840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541355-541840:1:exon

DMP02_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mreD
locus tag: DMP02_RS02540
old locus tag: RVIR1_05200
inference: COORDINATES: protein motif:HMM:NF016019.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MKPLYFSTYLLLILSFVFAVMLNIVPLTPTLALIYPLWLPLILIYWVMVLPEHIHLTLAWSLGLIIDVLHGSYLGEHSLALCVITFLAYRFHLQFRMFPLMQQMLFVFMLLLIYVGLLAWIQSLLKVTIQLRWLWVSLIVSAFMWPVLQKLLRINPIDMRY
SIO_010081: DMP02_RS02540
subclass of: SO_0000673
so part of: DMP02_RS02540
location: 541355..541840
location: region:541355-541840:1
so has part: feature:541355-541840:1:exon

WP_126322519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541355-541840:1:exon

DMP02_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02545
old locus tag: RVIR1_05210
so part of: sequence
location: 542344..542589
location: region:542344-542589:1
so has part: feature:542344-542589:1:exon
subclass of: SO_0000010

position:542344:1
position: 542344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542589:1
position: 542589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542344-542589:1:exon

DMP02_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02545
old locus tag: RVIR1_05210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGKESNKRSHSTHSGSATFKQRIAPKIAAHIQEPIVVRITGEDTCLNAWLIENLRTISPLHITLSARGAQRPGKCYRKRA
SIO_010081: DMP02_RS02545
subclass of: SO_0000673
so part of: DMP02_RS02545
location: 542344..542589
location: region:542344-542589:1
so has part: feature:542344-542589:1:exon

WP_126322520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542344-542589:1:exon

DMP02_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02550
old locus tag: RVIR1_05220
so part of: sequence
location: 542591..542797
location: region:542591-542797:1
so has part: feature:542591-542797:1:exon
subclass of: SO_0000010

position:542591:1
position: 542591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542797:1
position: 542797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542591-542797:1:exon

DMP02_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02550
old locus tag: RVIR1_05220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKVTITLKDGTSFEHDFACNHPYAEMFQIIREIIGIDSRVKWFKDLKDEFYNIQCFGDVRVDISKDK
SIO_010081: DMP02_RS02550
subclass of: SO_0000673
so part of: DMP02_RS02550
location: 542591..542797
location: region:542591-542797:1
so has part: feature:542591-542797:1:exon

WP_126322521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542591-542797:1:exon

DMP02_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02555
old locus tag: RVIR1_05230
so part of: sequence
location: 542953..544065
location: region:542953-544065:1
so has part: feature:542953-544065:1:exon
subclass of: SO_0000010

position:542953:1
position: 542953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544065:1
position: 544065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542953-544065:1:exon

DMP02_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02555
old locus tag: RVIR1_05230
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF013257.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 9 protein
translation: MNKILSGRLLIICTRRIGDVLLVTPLIRTFKRHWPDAQIDVLVFQGTESILANNKDIHTIISIEERPCFSSYCRLIKKIFRAYDLSISTLPNDKSTLYAFFAARYRVGMLSDDKSRWWKSRLLSKAVKFDNLSTHTVVMNLRLAEVLQLTPFPEIVLAWNAKDVAQVANYVDIADKKMAVLHVMPKFSYKEWVQQGWLQLANCLQMHGYTVIFSGDNSQQEKKIVSEILAHLKANAINLVGCLSLSQLAFLLQHSQLYIGPDTVVTHMAAALGIPTIALFGPTNPVKWGPWPKAWNSLSNPFVYKGSQQKNNVYLIQGEGGSCVPCFQEGCERHIKSRSRCLENLTAHQVIAVIQQLTDTVREPVEVYLP
SIO_010081: DMP02_RS02555
subclass of: SO_0000673
so part of: DMP02_RS02555
location: 542953..544065
location: region:542953-544065:1
so has part: feature:542953-544065:1:exon

WP_126322522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542953-544065:1:exon

DMP02_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02560
old locus tag: RVIR1_05240
so part of: sequence
location: 544144..544908
location: region:544144-544908:1
so has part: feature:544144-544908:1:exon
subclass of: SO_0000010

position:544144:1
position: 544144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544908:1
position: 544908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544144-544908:1:exon

DMP02_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02560
old locus tag: RVIR1_05240
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MQLSVIIISKNASNDIRFCLESVKWADEIIVLDSGSTDNTREICSEYTSNVFSVDWPGFGVQKNRALAKAQGKWVLSIDSDEVLSEALTVEIKQIISNSNICQDAYSIKRVSYFCGKKIHYGDWGNDRVVRLFKNHVKIQFNPVPVHEKVVNYHYLGYLKHFIFHQTTKSISQMLVKLDNYSTSGAQLAYQRGKKSSMLKACLHGLWCFIRGYIIRLGFLDGREGFILAVSNAMGVFYRYVKIIYLYQAQSKEL
SIO_010081: DMP02_RS02560
subclass of: SO_0000673
so part of: DMP02_RS02560
location: 544144..544908
location: region:544144-544908:1
so has part: feature:544144-544908:1:exon

WP_126322523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544144-544908:1:exon

DMP02_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02565
old locus tag: RVIR1_05250
so part of: sequence
location: 544918..546144
location: region:544918-546144:1
so has part: feature:544918-546144:1:exon
subclass of: SO_0000010

position:544918:1
position: 544918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546144:1
position: 546144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544918-546144:1:exon

DMP02_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02565
old locus tag: RVIR1_05250
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MSASTIATKISGLKNSFKHLSQIFVIIAAFALPLSTAVLEVFFIASVMCCILAGDWKKHAEVLRTNRMALMFLVFFALFIVCISYSVASWSEELYILSKYSKFLLGFFLFSVFSDEKTRYYAFFSFLCAATLTLLLSYLKFFGWDILHRFSGDSGVFKDHIFTGFLLAFTSYAYALLAFSNKKWRLVFTVLFLLASFNVLFINLGRSGYVVFFSLLLLLSWQKFSWKGFSVAVLLSIFLLGGTLLLPSNFKDRFFTVHKEIQQYDKGKEDTSTGLRLSFYKNSLQLFFKHPWIGTGTGSFAKAYASVAKENEWLTKNPHNEYLNIAVQFGLLGLIVLLALFISHWQQSFRLPWVAKNFAQAVVVSIAVGCLFNSWLLDVTQGTFYVLFTALLFSRASDNCLEFEQGIG
SIO_010081: DMP02_RS02565
subclass of: SO_0000673
so part of: DMP02_RS02565
location: 544918..546144
location: region:544918-546144:1
so has part: feature:544918-546144:1:exon

WP_126322524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544918-546144:1:exon

DMP02_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02570
old locus tag: RVIR1_05260
so part of: sequence
location: 546302..549310
location: region:546302-549310:1
so has part: feature:546302-549310:1:exon
subclass of: SO_0000010

position:546302:1
position: 546302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549310:1
position: 549310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546302-549310:1:exon

DMP02_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02570
old locus tag: RVIR1_05260
inference: COORDINATES: protein motif:HMM:NF024893.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3971 domain-containing protein
translation: MKHLFFSLSRFAVVFLSSSLVFFALLVVTGRLLTPFLNHQTQAIEQFTADLLHKPVQVKQFSVIWRGLLPILQGEDVIIWNDSRTQPLLQVKQLDVGINLVKTLLTGSIKLGEVRGLGAELAIHQTKDNQFIVNGFNTALAQPEKDQPNSINALLGWLLEPQLSLQNIKLSYYPVSGEKWPEMQLSAAIENKNNHHYLSAQLQFIGTAQPENLTLIADMTGSVEPSLNNLKGQFYLEGHSVLLDRWIALVTKKYTLQQGVANFKLWSDWQQAHFTKIQALVAHTENSVIQIAKEPPLTLMPFSANIEWQSASDNSWAVNAIVRNFGFLAWKKIPGVKGLNAYAHVTPNSGNFTAHSRNLDVDFKKLFKAPIHLDDLYSELNWQRKTDATLIKVTKFSAVNADASANGQMGLLIPANNATPIINLLAHVKTKRPSQIGSYLLLPFVGHELVQWLDSAIIKGKGDGSVILQGSLSEFPFDKNDGTFLIDTQIHNAELHYESDWPNLQNINGELVFSGRQMQMVVDSAEIFGVDLKDIRANIPLIKTHVQAMLHIATDTINTQLEKGLDFLQATPLAKELGGLSSLELTGPLKLALQLTVPLESGKEKLKVAGTGITQNAKANIPSHNIQIDDLKGQFSVSETSVQAQNLMGVLWNKPINIGIRSVPKTQLVINYDGIDTVLSPEGQGWRFSVNNKLAKGSILIPNNKEQAIEANFDSLVLNSESSAQSEWSFKQIPAINLIAKDVRYNKMDFGKVQLKLRPVLAGIAIRGLQAGNASYHLIANGVWHRQENKKTEFIGQLDSPDLSSFLRSWGLPASLTAEQAHIRFNLQWSGAPYEINLAKLQGSFSFNAANGQIVDIGSSAEAKLGFGRLLTFLSLQSLGKRLQLDFSDLQAKGFDFTSMQGHFNLRAGNAITRDLTIEGPVAAISIMGRVGLQAKDYDLRIKVLPHFTSSLPVIVGLAGGPIAGAITWVANAVLGSTVQKIAETSYHITGSWAKPNIQKNT
SIO_010081: DMP02_RS02570
subclass of: SO_0000673
so part of: DMP02_RS02570
location: 546302..549310
location: region:546302-549310:1
so has part: feature:546302-549310:1:exon

WP_126322525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546302-549310:1:exon

DMP02_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: tldD
locus tag: DMP02_RS02575
old locus tag: RVIR1_05270
so part of: sequence
location: 549553..551001
location: region:549553-551001:1
so has part: feature:549553-551001:1:exon
subclass of: SO_0000010

position:549553:1
position: 549553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551001:1
position: 551001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549553-551001:1:exon

DMP02_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: tldD
locus tag: DMP02_RS02575
old locus tag: RVIR1_05270
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010654081.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloprotease TldD
translation: MTKNNLILARQVLLEPAGLTENQLQTVLSQLLSPAVDMADLYFQATQSESWVLEDRIIKNGSFNIERGVGVRAISGEKTGFAYSDDIILPALQSAAKMAASIAGRGQHGHMNAWQKKPLVNPLYQPIDPILSLNEREKLDLLRQVDEAARAMDPRVQQVNVSLVGEQETILVFNSDGSMSADIRPLVRLNVSVIAEEKGQREQGFAGGGGRTDYHYFMRDNIAIDLAKEAVRQAILNLEAVPAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFTGRVGQRVASPGCTVVDDGTLPNRRGSLTIDDEGTPTQRTILIEKGILKGYMQDKLNARLMGTQSTGNGRRESYACLPMPRMTNTYMLPGPYAPEEIIASVDKGLYAVNFSGGQVDITSGKFVFSACEAYLIENGRITRPVKGATLIGNGPEVLNQVSMIGNDLKLDSGIGSCGKEGQSVPVGVGQPTLKIDSLTVGGTAT
SIO_010081: DMP02_RS02575
subclass of: SO_0000673
so part of: DMP02_RS02575
location: 549553..551001
location: region:549553-551001:1
so has part: feature:549553-551001:1:exon

WP_126322526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549553-551001:1:exon

DMP02_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: msbA
locus tag: DMP02_RS02580
old locus tag: RVIR1_05280
so part of: sequence
location: 551083..552816
location: region:551083-552816:1
so has part: feature:551083-552816:1:exon
subclass of: SO_0000010

position:551083:1
position: 551083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552816:1
position: 552816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551083-552816:1:exon

DMP02_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: msbA
locus tag: DMP02_RS02580
old locus tag: RVIR1_05280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012220444.1
GO function: GO:0005319 - lipid transporter activity [Evidence IEA]
GO process: GO:0006869 - lipid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid A export permease/ATP-binding protein MsbA
translation: MTKSISHLYTYRRLLGYLQRNWGWFLLGIIGTVFLAGTDAGLIWFLKPLLNKGFVDKDMHFIRYLPIILVVAFIVRGLANFSSGYCLARVARSTVMHIRQEVLAKLLRLPATFYDNTTSGQLLSTIIYNVEQIANASTNSLITLVQESAFIIGLVIIMLTASWQLSLLFFVAVPTMIWIARYSSRRMRTLNKAVQDSMSELTQVAEEVIDGYKVIRTFGGENYETTKFNSLLGRNRFRELKVVVTSSLASSAVQLIAGGIVVITIYLATSHLTHITAGGFASMVTAMLLLLKPMRNLAAVNNVIQRGVSAASSIFALLDEKPERDEGTHTLSTVKGALEFRDVNFSYLQNQVVLAGISFKVNPGETIAIVGRSGSGKSTLVNLLPRFYDHYTGKILLDGIDIRELKLSDLRTQFAFVSQHVTLFNDTIAHNIAYGQLSSVSESMIRRAATAAHAMEFIQQLPEGLSTLIGENGVLLSGGQRQRIAIARALLKNAPFLILDEATSALDTEAERHIQAALEELMHNRTTLVIAHRLSTVEKASKILVLDAGCIVETGTHQELLARNGYYAKLYSMQFAV
SIO_010081: DMP02_RS02580
subclass of: SO_0000673
so part of: DMP02_RS02580
location: 551083..552816
location: region:551083-552816:1
so has part: feature:551083-552816:1:exon

WP_126322527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551083-552816:1:exon

DMP02_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02585
old locus tag: RVIR1_05300
so part of: sequence
location: 552935..554011
location: region:552935-554011:1
so has part: feature:552935-554011:1:exon
subclass of: SO_0000010

position:552935:1
position: 552935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554011:1
position: 554011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552935-554011:1:exon

DMP02_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02585
old locus tag: RVIR1_05300
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MraY family glycosyltransferase
translation: MFHLFSATIAFFTTVFCIFLLKPLALRLGLIDVPNDRKQHQHHTPLIGGLAMFIGFLVALLTLPISLQHYRSFIAGSALLVFVGLLDDFHELSPRSRFLAQIFALLLMFFWGGIKLTHLGDLIFYKPIGLGIYSLPVTLIAGLGIINAINMTDGVDGLAGTLVLTELTLLIVCTVIKGQFLSLSILLLIAATVLAFLMFNFRLPRRLHAQVFMGDAGSMFLGFALVWFLIELSQSGSQAVRPVTMLWITGLPLFDTTAVMLYRASKKQSIFSSDRQHLHHLLVELNMTSAQISISLGASNLALGLLGVLADHYQWAEGVVFIGFIILFVLYFISLFYLRYKLSQKKNSVVFARLLSEN
SIO_010081: DMP02_RS02585
subclass of: SO_0000673
so part of: DMP02_RS02585
location: 552935..554011
location: region:552935-554011:1
so has part: feature:552935-554011:1:exon

WP_126322528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552935-554011:1:exon

DMP02_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02590
so part of: sequence
location: 554156..554398
location: region:554156-554398:1
so has part: feature:554156-554398:1:exon
subclass of: SO_0000010

position:554156:1
position: 554156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554398:1
position: 554398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554156-554398:1:exon

DMP02_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTGLVIAAAAAAMILSGCATGARNIPENSPICETPCAAPCNTCKCMSSCKSACPTKKHKRHKKHRRCSAENTQTQMSA
SIO_010081: DMP02_RS02590
subclass of: SO_0000673
so part of: DMP02_RS02590
location: 554156..554398
location: region:554156-554398:1
so has part: feature:554156-554398:1:exon

WP_126322529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554156-554398:1:exon

DMP02_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02595
old locus tag: RVIR1_05320
so part of: sequence
location: 554533..555375
location: region:554533-555375:1
so has part: feature:554533-555375:1:exon
subclass of: SO_0000010

position:554533:1
position: 554533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555375:1
position: 555375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554533-555375:1:exon

DMP02_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02595
old locus tag: RVIR1_05320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF692 domain-containing protein
translation: MDEVFLGFGLGLRAPHYSTILESRPKVDWFEAITEDYLVPGGRPLYYLNRIREHYPLVMHGVSLSIGSGDGINFEYLKKVKALAASIQPAWISDHLCWTGIQGLNMHDLLPLPYTEESLNHVVNKIKKVQDFLGRQILLENVSSYIEYQASMMKEWDFLAAIAEQADCFILLDINNIYVSSINHQFNPLDYLNAIPAHRVRQFHLAGHKNCGTHIIDTHDAPIIDSVWSLYAAAVRRFAKVSTMIERDDNIPALSELLTELQQARQIAETVWKEEDVFIS
SIO_010081: DMP02_RS02595
subclass of: SO_0000673
so part of: DMP02_RS02595
location: 554533..555375
location: region:554533-555375:1
so has part: feature:554533-555375:1:exon

WP_126322530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554533-555375:1:exon

DMP02_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02600
old locus tag: RVIR1_05330
so part of: sequence
location: 555359..556135
location: region:555359-556135:1
so has part: feature:555359-556135:1:exon
subclass of: SO_0000010

position:555359:1
position: 555359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556135:1
position: 556135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555359-556135:1:exon

DMP02_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02600
old locus tag: RVIR1_05330
inference: COORDINATES: protein motif:HMM:NF021364.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding domain-containing protein
translation: MSSLVSLQEALQRHLLEDDEQIANELVSPRQGGLVERLAVYADGYRWRLIDALQKEYALLHHYLGDDAFTELADTYIDENPSRFYSISDFTKQLPEFLLKYRPQQGYLSELAQIISALSLSLEAADVPFLDQAALAKIPVQNWPSLCFKFHPSLHYFSFQWNTFALWKALVKKTAYPTLIRQNSYCIVWRKELQSYANSLAESEAAVFAAFSAGACFEEVCERVCARGLVGETEAAALLANCLTRWLNDHLISEVYIP
SIO_010081: DMP02_RS02600
subclass of: SO_0000673
so part of: DMP02_RS02600
location: 555359..556135
location: region:555359-556135:1
so has part: feature:555359-556135:1:exon

WP_126322531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555359-556135:1:exon

DMP02_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02605
old locus tag: RVIR1_05340
so part of: sequence
location: 556135..557787
location: region:556135-557787:1
so has part: feature:556135-557787:1:exon
subclass of: SO_0000010

position:557787:1
position: 557787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556135-557787:1:exon

DMP02_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02605
old locus tag: RVIR1_05340
EC number: 6.3.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006870287.1
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MTTRYIFITGGVVSSLGKGIAAASLGAILESRGLKVSLLKLDPYLNLDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFVRAKMTRNNNFTAGQIYARVLRKERRGDYLGGTVQVIPHVTDEIKQAIVKGADDADIALVEIGGTVGDMESLPFLEAIRQLRIELGNQQTLFIHLTWVPYIGTAGEIKTKPTQHSTKELGSFGIQADMLICRSEKELPEHAREKIALYTNVGAGVISLPDVDNIYRVPLLLHEQGLDEMVLKRFGLNYPPADLKAWEEVVAAQKNPTAEVKVGMVGKYMGLADSYKSLSEALIHAGIKTHTYVNIVYIDAEALEQHGTKLLEPLDAILVPGGFGKRGIDGKIMAAQYARENNVPYLGICLGMQTALIEFARHVGLKAAHSTEFDDQTPYPVVALVTEWVTPEGRREKRDKDSDLGGTMRLGGQTCCLVEGSKARTLYGKDSVIERHRHRYEVNDQLLPKLEENGLIVSGRSADGNLVEMIELKDHSWFIGCQFHPEFTSNPRDGHPLFVSFVEAARSQHAQTLHADKVIST
SIO_010081: DMP02_RS02605
subclass of: SO_0000673
so part of: DMP02_RS02605
location: 556135..557787
location: region:556135-557787:1
so has part: feature:556135-557787:1:exon

WP_126322532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556135-557787:1:exon

DMP02_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02610
old locus tag: RVIR1_05350
so part of: sequence
location: 557837..558709
location: region:557837-558709:1
so has part: feature:557837-558709:1:exon
subclass of: SO_0000010

position:557837:1
position: 557837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558709:1
position: 558709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557837-558709:1:exon

DMP02_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02610
old locus tag: RVIR1_05350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MDGINEEVFLENTLLQNNDNVAPVIPFNSKYRLALADICDGLKQWRIWLLLAWQEVKLRYRRSTLGPFWITLSMAITIYTMGLLYGHLFKMDLSQYYPFLACGILGWGLISSLLTESTNIFVESEQFIKQIKQPYSLFIFKNVTRSFIIFLHHIIILVPIFIFFNVKINVYSLFFLFSLTVIWLNAVTYGVMLAILGTRFRDIVQLVNSLIQVIFFLTPIIWLPSVLPDRYQYIIQLNPFAQFMELLRNPLLGSLPSHYTLFFTLFITLLGLSAAFMLFARCRARIAYWL
SIO_010081: DMP02_RS02610
subclass of: SO_0000673
so part of: DMP02_RS02610
location: 557837..558709
location: region:557837-558709:1
so has part: feature:557837-558709:1:exon

WP_126322533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557837-558709:1:exon

DMP02_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02615
old locus tag: RVIR1_05360
so part of: sequence
location: 558722..559471
location: region:558722-559471:1
so has part: feature:558722-559471:1:exon
subclass of: SO_0000010

position:558722:1
position: 558722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559471:1
position: 559471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558722-559471:1:exon

DMP02_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02615
old locus tag: RVIR1_05360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAVIQLDSVSVNFPIYNLNTRSLKKKFLRLSTGGFLNTEEKVVVVKALDKVTFKLNHGDRVGLIGHNGAGKSTLLRVLAGIYEPIQGRFRSEGKVSSLLNIMLGINHESSGYENIMVRGLLLGLTRKEIRIKLNEIAEFTELGDYLFAPVRTYSAGMQLRLAFAVATCIKPDILLMDEMIEVGDANFVKKAQQRLGEFINKSSILVLASHSNETIKRLCNKVVLLEKGCVKYFGPVEEGFEKYNQPKPF
SIO_010081: DMP02_RS02615
subclass of: SO_0000673
so part of: DMP02_RS02615
location: 558722..559471
location: region:558722-559471:1
so has part: feature:558722-559471:1:exon

WP_126322534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558722-559471:1:exon

DMP02_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02620
old locus tag: RVIR1_05370
so part of: sequence
location: 559580..560359
location: region:559580-560359:1
so has part: feature:559580-560359:1:exon
subclass of: SO_0000010

position:559580:1
position: 559580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560359:1
position: 560359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559580-560359:1:exon

DMP02_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02620
old locus tag: RVIR1_05370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNKKIWFSVIEILVLLFILFCVSSSYLSQEAIGLHYNADMLYLPIVFQDLFHNGGHYVDWSLAPIPYFFPDWIIFFIAFIFTKQVYFQLLVVACLNILLLYLSIRLIYQALFSSNKAALFALMSISIFTFLSIKYIQPFEAVLLPNIHVGGFTVGLFYIWIQIKLLAKKQISQCSTWLFFAVLICFATGMSDLLYILQFTVPVFFGVLLFALKKKSKLSASISIRFITTPVFSVRRVVDKVHRASIHFVELLTRVSFH
SIO_010081: DMP02_RS02620
subclass of: SO_0000673
so part of: DMP02_RS02620
location: 559580..560359
location: region:559580-560359:1
so has part: feature:559580-560359:1:exon

WP_126322535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559580-560359:1:exon

DMP02_RS07445
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS07445
old locus tag: RVIR1_05380
so part of: sequence
location: 560998..561129
location: region:560998-561129:1
so has part: feature:560998-561129:1:exon
subclass of: SO_0000010

position:560998:1
position: 560998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561129:1
position: 561129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560998-561129:1:exon

DMP02_RS07445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS07445
old locus tag: RVIR1_05380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCNKVAEFTELGDYLLTSIRIYLALLAIAICIKPDTVFDGRND
SIO_010081: DMP02_RS07445
subclass of: SO_0000673
so part of: DMP02_RS07445
location: 560998..561129
location: region:560998-561129:1
so has part: feature:560998-561129:1:exon

WP_269471420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560998-561129:1:exon

DMP02_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02625
old locus tag: RVIR1_05390
so part of: sequence
location: 561370..562761
location: region:561370-562761:1
so has part: feature:561370-562761:1:exon
subclass of: SO_0000010

position:561370:1
position: 561370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562761:1
position: 562761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561370-562761:1:exon

DMP02_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02625
old locus tag: RVIR1_05390
inference: COORDINATES: protein motif:HMM:NF025217.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MLKLIKRFFNHFPRLIHLKLLLTNKWEIAKNVFMIYKLLKKIEYYQPLYNFNIFSKKNPQRKCIDRADTIYKEIVSWGNNSRILDIGCSLGYFSFFFAERNFLVNGVDYHSDNIKLCNSLKCFNSKNATFSTENFSESYINNLNCMQYDIAFIFSVLHHIIHEKGLYYVKNLINKLLDKIPVLFVELAVSREEVSTVWINSLPENELAIFDLERVDITLMGYFPTHLSSVLRRLYMVKNKVISLGGIACNFVGFRTLAYEKAPNLCRKYYDCGDIFVKQYLLDNDINNLENIIREIGVYNSLPKNSYIPTLINHKINHKTVEMFFLKYPGYPLFDWFIKGKKVLNHEIFKSLIESLSFLLDQGLYHNDIRLWNILFDGKKSYLIDLSEANSYEVESTKISLQWIIKEMHYFTCYRMLYPICEAPKFDISILSDEFKFFYQLLSSSRDLRVIFDNILNYDCINV
SIO_010081: DMP02_RS02625
subclass of: SO_0000673
so part of: DMP02_RS02625
location: 561370..562761
location: region:561370-562761:1
so has part: feature:561370-562761:1:exon

WP_126322536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561370-562761:1:exon

DMP02_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02630
old locus tag: RVIR1_05400
so part of: sequence
location: complement(562781..564016)
location: region:562781-564016:-1
so has part: feature:562781-564016:-1:exon
subclass of: SO_0000010

position:562781:-1
position: 562781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564016:-1
position: 564016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562781-564016:-1:exon

DMP02_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02630
old locus tag: RVIR1_05400
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010957740.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: METYKSIDACRISGDKNLISVLNLGNQALTGIFPATKTEDIAVAPLELVWSPSSGLLQLNHSCKPTDMYGSNYGYRSSLNRSMIEHLTRKVHYLEKFVKLDADNTVLDIGSNDCTLLHAYSTPNIERIGIDPTGEKFHSFYSKDIKLVANFFNAESYFSVTSQLATIITSIAMFYDLESPIQFAKEIESILDDNGIWHLEQSYMPAMLRLNSYDTICHEHLEYYSLAVINDILKSANLKLVDVTMNDINGGSFSIIATKVSNPIKPNYSVINWLLRQEELMELSTVKPYQLFKERAYAHRNELKNFIQLLVSDGKRILGYGASTKGNVLLQFCGLTTNEIPAIAEVNDEKFGRLTPGTHIPIISEAEAKAMNPDYFLVLPWHFKTEIIRREQEYLSKGGKFIFPFPNIEVM
SIO_010081: DMP02_RS02630
subclass of: SO_0000673
so part of: DMP02_RS02630
location: complement(562781..564016)
location: region:562781-564016:-1
so has part: feature:562781-564016:-1:exon

WP_126322537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562781-564016:-1:exon

DMP02_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02635
old locus tag: RVIR1_05410
so part of: sequence
location: complement(564038..566485)
location: region:564038-566485:-1
so has part: feature:564038-566485:-1:exon
subclass of: SO_0000010

position:564038:-1
position: 564038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566485:-1
position: 566485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564038-566485:-1:exon

DMP02_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02635
old locus tag: RVIR1_05410
EC number: 2.4.-.-
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MYIDTPRLDLIGKTSLNMVNLKNKRIFWLGAHKLLIKTELNRLRILGYEVFNPPYLSTTIDQSAAMDWKQAPSSLPKEAISILSNTNFFYTSIPKQAAEILNEYFGTVIVTINPDWLKNILDVYHGKVIYRIYGQNYNLSQYMINNHIIDLISEHEDFWLYPHSNVALLPEDHWLQQLSPQSIPYCLADDIIEKKDTWRFKTELNTMGMMCPRALDNLYYHQHYQQIKRHFSDPNYKVFGIQIIPVSDPQVMGTLNRNEQLNHFIRLRGFIYHYSDPSVCYLPPIEFMTLGGPVIFLKGSLLANSFNTSTPGEAKDINQLAKLAKQIQKGDNILIQEIIASQESVRMLYDPSYVWPIFDKAIETALTKKDNSLKSIIYKPKKNNFIKLKSTQPNDKSILIPFHKFGPFIHKTNQSYHCSEGIARVTRLLTEELANKNHNIIITSARDSFGKIHGFISEHVKNISNIKILIIENKLPFLEKLENKISKTIDNRNYLKLFKITVGIIITIRKIFEYIYSLPYVYKLNHDTSIKKIIIPHYFLFPEYIFSKKNIYLYLPDYLPHFYPNYREMGDRWVYKIIGKIIAKKAKTIFTNSQVTKNYLPNTYLQVKKEKIHVFPLPYLNKEKEHAKKKFLLDNNIELPSLFVFYPTRDRPSKRLSDFTQTVFLINNYLREKGEKKCIYGVLTTPLKSVTSNRYIIHLPQLPDHMLSHVYKKAAALLFTSENEGNFPTQITEALYLETPIIAARIPQITQELGEISNSLQLIDIGNCKKFSEAVLYTMDNREKVLSNQKIAKEYIKKYFSYEKFSSGFMKACLT
SIO_010081: DMP02_RS02635
subclass of: SO_0000673
so part of: DMP02_RS02635
location: complement(564038..566485)
location: region:564038-566485:-1
so has part: feature:564038-566485:-1:exon

WP_145985125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564038-566485:-1:exon

DMP02_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02640
old locus tag: RVIR1_05420
so part of: sequence
location: complement(566497..567471)
location: region:566497-567471:-1
so has part: feature:566497-567471:-1:exon
subclass of: SO_0000010

position:566497:-1
position: 566497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567471:-1
position: 567471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566497-567471:-1:exon

DMP02_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02640
old locus tag: RVIR1_05420
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MTKRALITGITGQDGAYLAKLLLQKKYKVYGLVARRTSDSQWRLRELGLLDQVELINGDMIDPSSLVRAMELSEADEVYNLAAQSFVGTSWEQPSLTGQVTALGVTNLLEAIRLTNSKAKFYQASSSEIFGLIQEQTQNEKTPFYPRSPYAVAKVYGYWITVNYRESFGMHASNGILFNHESPLRGLEFVTRKISHAVACIKQKKLKKLSLGNISAKRDWGFAGDYVEAMWLMLQQNQPDDYVIATGRSTTVEQLCQLAFNHVGLDYKEYINTDQKLIRPAEVDILLGDPQKAKTKLNWQAETTLETLITMMVDADMKRVLVTN
SIO_010081: DMP02_RS02640
subclass of: SO_0000673
so part of: DMP02_RS02640
location: complement(566497..567471)
location: region:566497-567471:-1
so has part: feature:566497-567471:-1:exon

WP_126322539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566497-567471:-1:exon

DMP02_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02645
old locus tag: RVIR1_05430
so part of: sequence
location: 567606..568748
location: region:567606-568748:1
so has part: feature:567606-568748:1:exon
subclass of: SO_0000010

position:567606:1
position: 567606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568748:1
position: 568748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567606-568748:1:exon

DMP02_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02645
old locus tag: RVIR1_05430
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MSIKVFLTRYGLKPPLTGIGWYASNLMQGLLAHHTIKSLMLVPSIDRVNRKEKKIFFGIKKLVQCSSIAYRSLYHYQNIVFHGKSHSFEQQGFLYHEPSCILRPYSGVKICTVHDLSYIHYSEYHPRGRVKFLFRYLPKSVDMADHIITGSDFVRKELIDYFKIPTEKITTVHHGVSFAFRPRQMNEVDKVLNHYGLLGKTYILSVGTLEPRKNLERLLNAFTQLPEAQRKRYPLVLVGLSGWRVHKLEKLIKQLMKKGVLYCLGYVRSEDLPYLYSGAYGFVYLSLYEGFGLPLLEALASGIPTLCSATSSMPEVVGYAALLVNPFDIDLIKEKLTQLLTDNCLRKKLKKAGPLQAAKFSWGNCVDNTVKVYQKVLAVS
SIO_010081: DMP02_RS02645
subclass of: SO_0000673
so part of: DMP02_RS02645
location: 567606..568748
location: region:567606-568748:1
so has part: feature:567606-568748:1:exon

WP_126322540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567606-568748:1:exon

DMP02_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02650
old locus tag: RVIR1_05440
so part of: sequence
location: complement(568724..570214)
location: region:568724-570214:-1
so has part: feature:568724-570214:-1:exon
subclass of: SO_0000010

position:568724:-1
position: 568724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570214:-1
position: 570214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568724-570214:-1:exon

DMP02_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02650
old locus tag: RVIR1_05440
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: protein motif:HMM:TIGR01479.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MLVPIILSGGNGSRLWPISREACPKPFMQFGDSTSLLQATFKRAANLPDVTQIITTTNTAYYEQSRQELSQLNLEKKVQFRFLLEPVSKDTAPAILFSAFFIQKIISPEAILLILPADHTIDNETQFHCCVQQATELAKQGLVVTFGITPDKPEIGYGYIHYANCYANSQGYHVENFYEKPSIQVAKKFLEEKNYLWNSGIYCFSITTLVSSIKKYNPTLYDKALVCWDITKKNIFLKKGLVEKVYLDTDSFKKLETLSIDYAISEKIKNIAVIPASFRWSDVGTWNTFQKLLNADKNNNCTVGKVILKNSKNTTIYNKNQQKNRLIVGLGLNNLIVIDTCDALLISNQEDTQMIKQIVTELKENKQDSYQHYHTVYRPWGHFTVLNEEKNYKIKRIVVNPNSSLSLQIHQHRCEHWVVIEGVATVENNLDKLTLKEKESTFIQTGHKHRLKNLTNKSLVIIETQIGSYLGEDDIIRLEDDYHRQDTAHQETANTF
SIO_010081: DMP02_RS02650
subclass of: SO_0000673
so part of: DMP02_RS02650
location: complement(568724..570214)
location: region:568724-570214:-1
so has part: feature:568724-570214:-1:exon

WP_172593965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568724-570214:-1:exon

DMP02_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02655
old locus tag: RVIR1_05450
so part of: sequence
location: 570471..571601
location: region:570471-571601:1
so has part: feature:570471-571601:1:exon
subclass of: SO_0000010

position:570471:1
position: 570471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571601:1
position: 571601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570471-571601:1:exon

DMP02_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02655
old locus tag: RVIR1_05450
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MERILHIGKFSQGKVGGIETALDNLINGLSPFFQLFKVVSNNHFKLETIKKPQHLEVNVPSMGLLANTPICPTMAYHVKKMHKRFNFSIVHLHLPNPMAHFSSEFLPASVKRIVSWHSDIVKQKHLLPFYQPWVGRLLEKSAAVIVATHDLAEKSSQLAIARKKGILHVIPYGIDINSFNAEDSRIAVDMLRKKFKGKFIIFSLGRHVAYKGFCYLIEAMSYMQDDCILLLGGEGPLTMQLKKQVKGLGLTQRIHFLGQLPTRKLTTYFHACHVFCMSSIEKNEAFGLVQLEAMACTKPVVSCDLGNDDMVNQDGITGLVVPPKSPVFLANALTKLYQEPVLRRQLGEAAYSYVKEKYTYGRMVNTVQALYEDVLR
SIO_010081: DMP02_RS02655
subclass of: SO_0000673
so part of: DMP02_RS02655
location: 570471..571601
location: region:570471-571601:1
so has part: feature:570471-571601:1:exon

WP_126322542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570471-571601:1:exon

DMP02_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02660
old locus tag: RVIR1_05460
so part of: sequence
location: complement(571598..572530)
location: region:571598-572530:-1
so has part: feature:571598-572530:-1:exon
subclass of: SO_0000010

position:571598:-1
position: 571598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572530:-1
position: 572530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571598-572530:-1:exon

DMP02_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02660
old locus tag: RVIR1_05460
inference: COORDINATES: protein motif:HMM:NF039471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6492 family protein
translation: MIYFITIGKHHIIPALICVKTLKALNKNKIIIAGNLAPHDKKKFTALGAEYIDENDINLKDRFPAISWNEKYRNSGWYKQQFLRLSIDRYIKEDLVFILDSEFFPFSNWDESRFFEPDRKPRYLHWISSQRKPDWDYKMYRGAAYLLAGLPECKEIMTYANSDNYQRHISGVQIFSTKNLAHLWSRLTKETDLELNLHTLFNKSDLAFSDYDFYGMANTFNLFEKITPTATYNNLLGWYDVHDDHIFNQFKSDAMWSMCQRYPEYPTEHSYYKYMKNIASMLGREVIKIPVKHNFSKKIIGQFIRKIFEF
SIO_010081: DMP02_RS02660
subclass of: SO_0000673
so part of: DMP02_RS02660
location: complement(571598..572530)
location: region:571598-572530:-1
so has part: feature:571598-572530:-1:exon

WP_126322543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571598-572530:-1:exon

DMP02_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02665
old locus tag: RVIR1_05470
so part of: sequence
location: complement(572596..573882)
location: region:572596-573882:-1
so has part: feature:572596-573882:-1:exon
subclass of: SO_0000010

position:572596:-1
position: 572596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573882:-1
position: 573882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572596-573882:-1:exon

DMP02_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02665
old locus tag: RVIR1_05470
EC number: 6.3.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035677.1
GO function: GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate synthase
translation: MTKTLIIVGCQWGDEGKGKIVDLLTPQVKAVVRFQGGHNAGHTLVIQGKKTILRLIPSGILHAGVECLIGNGVVISPEALLKEMNELEEKGIPASQRLRISASCPLILASHIALDEARESDSKNAIGTTKRGIGPAYEDKVARRGLRMSDFFNPKQLAEKLKILLDYHNFLLQHYYKIPTIDYDQTLAALLEMAKKLTPLITDIPALLAKYQQEKKPLLFEGAQGTFLDIDQGTYPFVTSSNTIAGAAATGSGLGIRHFDAVLGISKAYSTRVGNGVFPTELLDEDGQTLRDRGHEYGSVTKRPRRCGWLDSVLLRRAVQLNSISSLCLTKLDVLDEMETIKICTAYQLDGKQLNDLPLNPEDLARCVPIYEEHSGWKTSTTPIKEFSKLPANAQKYLRRIEELTGVPISIISTGADREETIVLNKIF
SIO_010081: DMP02_RS02665
subclass of: SO_0000673
so part of: DMP02_RS02665
location: complement(572596..573882)
location: region:572596-573882:-1
so has part: feature:572596-573882:-1:exon

WP_126322544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572596-573882:-1:exon

DMP02_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02670
old locus tag: RVIR1_05480
so part of: sequence
location: complement(573879..574763)
location: region:573879-574763:-1
so has part: feature:573879-574763:-1:exon
subclass of: SO_0000010

position:573879:-1
position: 573879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574763:-1
position: 574763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573879-574763:-1:exon

DMP02_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02670
old locus tag: RVIR1_05480
inference: COORDINATES: protein motif:HMM:NF013324.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease modulator HflC
translation: MSLTKNKTILILGFLIATLFLSYQSIYTVAEGHTALLEKGNTAISQAEPGLHFTLPFFVRPEQIDLRIRSISFTKSNLLTADGHPLLIDYYTKWKIIDPVLYYQQTHNDSQQTQQRLTQIINTLLQNECARNTLNTMISSPNASTEVIQAQANQQLKTLGISLVDIGFKSIDFPTEANNTLLEKRRLEQAQIALEQRAMGKANAENIRLKADNEAALELAKATEEAALIRGQGDAEAAKIYTAAYQQNPQFATFYLNLEAYKKGFTQSSTNNNFLVLNTKASFFNDKEKLRLKS
SIO_010081: DMP02_RS02670
subclass of: SO_0000673
so part of: DMP02_RS02670
location: complement(573879..574763)
location: region:573879-574763:-1
so has part: feature:573879-574763:-1:exon

WP_126322545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573879-574763:-1:exon

DMP02_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hflK
locus tag: DMP02_RS02675
old locus tag: RVIR1_05490
so part of: sequence
location: complement(574760..575938)
location: region:574760-575938:-1
so has part: feature:574760-575938:-1:exon
subclass of: SO_0000010

position:574760:-1
position: 574760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575938:-1
position: 575938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574760-575938:-1:exon

DMP02_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hflK
locus tag: DMP02_RS02675
old locus tag: RVIR1_05490
inference: COORDINATES: protein motif:HMM:TIGR01933.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0045861 - negative regulation of proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsH protease activity modulator HflK
translation: MPWNEPGNSSNNKDPWTGRPKQTPPDLEAFLRDLRKKIAAFFKLKALNKNTRAFTKTFLPAQFNIKILGLIFSALFLSWLFSGFFSVAPSEQAVITRFGKYHATLSQGHHWIFRPLETRYIISEKNVAFSYETNLLTRDENKVSLVIKARYAVDNARQYLFADTQSLQSLQDAIANATHQTLSQFSLAQLLTANLFSLQQTLQSKVDALLAQYATGLTVSNLEIQTIQAPEELKASFEEVTQAQAEKEQLENQAKTYALQLEPKTQGEAKNLIANAKNYQQEVILKAKAETARFLALLPAYEASPLLTRKRLYLDAMQAMMANSHKMLLDIPSNTSLSLNVDNMTKQSGVAPTTMASTQTTAATKPNTVLSMATPAKNDKVPSSYNITGGYE
SIO_010081: DMP02_RS02675
subclass of: SO_0000673
so part of: DMP02_RS02675
location: complement(574760..575938)
location: region:574760-575938:-1
so has part: feature:574760-575938:-1:exon

WP_126322546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574760-575938:-1:exon

DMP02_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hflX
locus tag: DMP02_RS02680
old locus tag: RVIR1_05500
so part of: sequence
location: complement(576239..577408)
location: region:576239-577408:-1
so has part: feature:576239-577408:-1:exon
subclass of: SO_0000010

position:576239:-1
position: 576239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577408:-1
position: 577408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576239-577408:-1:exon

DMP02_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hflX
locus tag: DMP02_RS02680
old locus tag: RVIR1_05500
EC number: 3.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035263.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome rescue GTPase HflX
translation: MFERPQSGELAILVHIHFEQTESKEIVEEFHELALAAGAKPMHLILGRQRTPFAKYFIGLGKVDEVHAALTAHHAKLVIFNHDLSPAQERNLEQQLQCRVVGRIGLILDIFAQRARTFEGKLQVKLAQLQHMSTRLIRGWTHLERQRGGIGLRGPGETQLESDKRLIRQQIKTIKKRLAKVQKQRAQSQRARRKSQLSHISLIGYTNTGKSTLFNALTGATVLAANQPFATLDPSIRRLRLYNGTPAILADTVGFIRQLPHDLIEAFSATLEETQEANLLIHVIDATSTDKLERNKEVQHVLEKIQAKQIPQLLVYNKIDLLNDTTPHLERDSTGLPSKVWISASTGEGISLLQQALYELLLAKQTPTSNQSFSSSLRARSARQSSDIV
SIO_010081: DMP02_RS02680
subclass of: SO_0000673
so part of: DMP02_RS02680
location: complement(576239..577408)
location: region:576239-577408:-1
so has part: feature:576239-577408:-1:exon

WP_126322547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576239-577408:-1:exon

DMP02_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: hfq
locus tag: DMP02_RS02685
old locus tag: RVIR1_05510
so part of: sequence
location: complement(577401..577664)
location: region:577401-577664:-1
so has part: feature:577401-577664:-1:exon
subclass of: SO_0000010

position:577401:-1
position: 577401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577664:-1
position: 577664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577401-577664:-1:exon

DMP02_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: hfq
locus tag: DMP02_RS02685
old locus tag: RVIR1_05510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035877.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA chaperone Hfq
translation: MSKGQLQDPFLNALRTDKFPVSIYLVNGIKLQGLVESFDQFVVLLKNSVSQMVYKHAISTVVPARNVSLAICPTKTEKDEELESINV
SIO_010081: DMP02_RS02685
subclass of: SO_0000673
so part of: DMP02_RS02685
location: complement(577401..577664)
location: region:577401-577664:-1
so has part: feature:577401-577664:-1:exon

WP_126322548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577401-577664:-1:exon

DMP02_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02690
old locus tag: RVIR1_05520
so part of: sequence
location: complement(577881..581027)
location: region:577881-581027:-1
so has part: feature:577881-581027:-1:exon
subclass of: SO_0000010

position:577881:-1
position: 577881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581027:-1
position: 581027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577881-581027:-1:exon

DMP02_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02690
old locus tag: RVIR1_05520
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MSTSPLSARLKQIDEENTKLEITKQHIKSSDTTWYDSDDIANLLKLLNSGSEVQIASAIPFTTTDNKIQKNIIGGVLNSTASPTIIFPINATTNIGVNGGTHWILGVYYKNDRKLAIFDPYGKTPITGKIKKFFQTIIPDVEIGINQQTFQTDGHSCGPIFIEIANRIAFDPENDDGILDEQTINHLREKHINMINEKIERNNQEKTSLLAQSSQNRPEIDDTNQAFSDDDMASVIESVVEDELANEFDYNSEDENHIYENNLYEIPLYEIPLDDENDLNLNRATEDKESGYSSDSGSEHVKANSDTKKTTHELSINSQKLLYESIKKNNRNLFQEVLKAGINPTTNSLLIAIAYKRTEMAQILIKNGAKLDDKAIRNIYLNLYPDIQFSDKAIAQLPLFIQLQKEVATSNSATQMQTNTFNSLSLHLAAEKGLLTPTKYLLRERTRQINEASIKDKDRILDVINYQDPKHGYATALHLAAKNGHTKIVKELLENSANPAFEDSHGNTALHLAAKNNHADIVNLLFQYGAKLLVKNKKGNTPLTLAVKNNRLEMVKQLLNKNVHYRSSFAEGANQLHLAIQNKNIDMVALLLEYNAKPNDEDHKALMTLVVENNRKDILEGLFSAKILLSKDNLNHALRLAATLNRSPIAELLIYHGANISTQDQEGNTPLHLAIHKNNPQIVPKLLKYCGKTDLLVKNKKGEIPLTLAIKNNRLEMVKQLLNKKAHLYSSAEDGANQLCVAIQNENPDMVELLLKNDAKPYMNDYSKLLALEIKYNRIDTLKNLLKNHKLTDIHLNDALHLAVAHNRLAITKLLLSYGAKISAPDQQNNTPLHTAVEHKKHNMVAYLVKHSSQDLFSFNSQGYSPFHLAILNGNERLAKQLNQAQAEYTRHFTYRLKLFFGQKPVPDLMYHLSKQGDTVLHLAAYSGNQSLFDSLHQFIEANDPQFLQRRNDEGFSAQEVMQEIQENQAQIISNSSVVIASNPVTPDEEQEPHPSDAQPKTIVSLGINQGLTLFNNKTQSGTLGNSSKGNQADADTQADNGLYAMRL
SIO_010081: DMP02_RS02690
subclass of: SO_0000673
so part of: DMP02_RS02690
location: complement(577881..581027)
location: region:577881-581027:-1
so has part: feature:577881-581027:-1:exon

WP_126322549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577881-581027:-1:exon

DMP02_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: polA
locus tag: DMP02_RS02695
old locus tag: RVIR1_05530
so part of: sequence
location: complement(581183..583972)
location: region:581183-583972:-1
so has part: feature:581183-583972:-1:exon
subclass of: SO_0000010

position:581183:-1
position: 581183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583972:-1
position: 583972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581183-583972:-1:exon

DMP02_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: polA
locus tag: DMP02_RS02695
old locus tag: RVIR1_05530
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013100961.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006261 - DNA-templated DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MKKPLILVDGTSYLYRAYHALPPLNNTKGEPTGAIYGVINMLRKLIKDYQPDHIGIVFDAKGKTFREDLYTAYKANRATMPEELQQQIEPLYAIVDSLGLPRLILEGVEADDVIASLAEKAIQQHLPVLISTGDKDFAQLVNPHITLVNTMTNTVLDREGVIKKFGVTPEQITDYLSLVGDAVDNVPGIPNVGPKTAAKWLNQYGDLATLIKNAADISGKVGENLRAHLDQLPLSRQLVTIKKDIELNVDIEDLRPKAADTAELMRWYKQLEFKGWIKELEKTTPPIEEENTATKNTDSQQWDFQQVPRNCELSGNTAENSSAKNIPKKNYPIILDEPSLDHWIKQLETASEWALDTETTSLDAMNAELVGLSFAIKPGKAVYIPLAHDYLDAPKQLDRNLVLKKLKPLLENPKQLKIGHNLKYDMSVLANYGIQLQGLAFDTMLESYLLDSASNQHSLDNAALKYLDYKTIHFVDIAGKGAKQKTFNQIDLTTAGEYAAEDSDIALQLHQTLWPQLTQTPPLATVLTTLEMPLVSVLSRIERYGVLIDAALLKKQSVSLAKRLLILEKKAYDLAGKTFNLSSPKQLQTILFIEQGLPIVEKTPTGQASTSESVLQSLALEYPLANVILKHRSLSKLKSTYTDKLPLQINPKTGRVHTSYHQAAVSTGRLSSSDPNLQNIPARTEEGRKIRQAFIAAPGYRIISADYSQIELRIIAHFSQDKGLLDAFAQGLDIHQATAAEVLKIPLEKVTSEQRRSAKAVNFGLVYGMSAFGLARQLGIGREEAKQYIDRYFMRYPGVKNYMERTRQQAKQQGYVTTLLGRRLNLPRINASDPLQRKASERAAINAPLQGSAADIIKKAMIDVDHAFLSQGIDARMIMQVHDELVVEAAISCQAKAKQLLEEHMVNVVKLRVPLIVDIHTGHNWAESP
SIO_010081: DMP02_RS02695
subclass of: SO_0000673
so part of: DMP02_RS02695
location: complement(581183..583972)
location: region:581183-583972:-1
so has part: feature:581183-583972:-1:exon

WP_126322550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581183-583972:-1:exon

DMP02_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02700
old locus tag: RVIR1_05540
so part of: sequence
location: 584094..585158
location: region:584094-585158:1
so has part: feature:584094-585158:1:exon
subclass of: SO_0000010

position:584094:1
position: 584094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585158:1
position: 585158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584094-585158:1:exon

DMP02_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02700
old locus tag: RVIR1_05540
EC number: 1.7.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035221.1
GO function: GO:0003920 - GMP reductase activity [Evidence IEA]
GO process: GO:0009117 - nucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMP reductase
translation: MRIEQEIRLDFKDVLIRPKRSTLQTRADVDLTREYTFKHSQFSWKGMPIIASNMDHTGTFAMAESLAKHKLLTAIDKFADLKEWKQFHAKHPKLHKYCFATTGIKPEDAAFLDKILKAVPTPFICIDVANGYTQRFVDCIRTLREKYPTKTLIAGNVVTAEMAEELVLAGADIIKVGIGPGSVCTTRLKTGVGYPQLSAIIECADAVHGLGGHLCADGGCVSPGDVAKAFSAGADFVMLGGMFAGHEECSGEKIQEDGKWFMRFYGMSSSEAMYKHHGRMNAYRASEGRSVNVPYRGKVENTVLDILGGLRSTCTYVGAQRLKELSKRTTFLRVTQQLNEVFAALQVNEVVNDN
SIO_010081: DMP02_RS02700
subclass of: SO_0000673
so part of: DMP02_RS02700
location: 584094..585158
location: region:584094-585158:1
so has part: feature:584094-585158:1:exon

WP_126322551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584094-585158:1:exon

DMP02_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02705
old locus tag: RVIR1_05550
so part of: sequence
location: 585230..585604
location: region:585230-585604:1
so has part: feature:585230-585604:1:exon
subclass of: SO_0000010

position:585230:1
position: 585230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585604:1
position: 585604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585230-585604:1:exon

DMP02_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02705
old locus tag: RVIR1_05550
inference: COORDINATES: protein motif:HMM:NF015085.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c maturation protein CcmE
translation: MDAVRRQRLYFSILALAILAVIGALFFYPLKQNFNLFYTPSQIAKGLVAAGQSFHLGGQVKKGTIKQNSNNLQVAFVVSDPQHNVLVEYEGVLPDSFREGQSVVIDGCLDEVGIMQAKRVLIKR
SIO_010081: DMP02_RS02705
subclass of: SO_0000673
so part of: DMP02_RS02705
location: 585230..585604
location: region:585230-585604:1
so has part: feature:585230-585604:1:exon

WP_126322552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585230-585604:1:exon

DMP02_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02710
old locus tag: RVIR1_05560
so part of: sequence
location: 585777..586313
location: region:585777-586313:1
so has part: feature:585777-586313:1:exon
subclass of: SO_0000010

position:585777:1
position: 585777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586313:1
position: 586313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585777-586313:1:exon

DMP02_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02710
old locus tag: RVIR1_05560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGLKIIAAIVSIIIASLAYILLTRYFPSEEVFFMGSGPLVRALAVDMKVKSNKEFPTFLPENSGFLVIHPSKSPEDHRDDVLETRRILALVAKTNNNVVQEADPLYTELEILFLKHTLVGVRASYITLANAGIKSITFNSDYLSQFAELYQDKLPHAAGYVMMADGSQRLIHDILVK
SIO_010081: DMP02_RS02710
subclass of: SO_0000673
so part of: DMP02_RS02710
location: 585777..586313
location: region:585777-586313:1
so has part: feature:585777-586313:1:exon

WP_126322553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585777-586313:1:exon

DMP02_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02715
old locus tag: RVIR1_05570
so part of: sequence
location: 586411..586698
location: region:586411-586698:1
so has part: feature:586411-586698:1:exon
subclass of: SO_0000010

position:586411:1
position: 586411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586698:1
position: 586698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586411-586698:1:exon

DMP02_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02715
old locus tag: RVIR1_05570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinate dehydrogenase assembly factor 2
translation: MINEDCKLNSNAAESSSAKSLNRLRWQCRRGMLELDLLLLPFVEKHYAGLSASDQELFEELLSYQDQDLYQVLIKNKSVEDPQLGRLVEAISHGG
SIO_010081: DMP02_RS02715
subclass of: SO_0000673
so part of: DMP02_RS02715
location: 586411..586698
location: region:586411-586698:1
so has part: feature:586411-586698:1:exon

WP_126322554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586411-586698:1:exon

DMP02_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02720
old locus tag: RVIR1_05580
so part of: sequence
location: 586688..587119
location: region:586688-587119:1
so has part: feature:586688-587119:1:exon
subclass of: SO_0000010

position:586688:1
position: 586688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587119:1
position: 587119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586688-587119:1:exon

DMP02_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02720
old locus tag: RVIR1_05580
inference: COORDINATES: protein motif:HMM:NF018908.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein YgfX
translation: MAVKFFRLKPSYYLAILLLIIHGGAIACLWVVPWPWWTKLLLVLAALVSFMTLFRQHVLLNNPRSIIEFWQQKGGHWQLKDNLAEIKTAKLADNSICTRYFVLLNFNCFNKQQPVSHVSVLVLSDSLNEHDFRCLRRQLQRIS
SIO_010081: DMP02_RS02720
subclass of: SO_0000673
so part of: DMP02_RS02720
location: 586688..587119
location: region:586688-587119:1
so has part: feature:586688-587119:1:exon

WP_126322555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586688-587119:1:exon

DMP02_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: erpA
locus tag: DMP02_RS02725
old locus tag: RVIR1_05590
so part of: sequence
location: 587136..587570
location: region:587136-587570:1
so has part: feature:587136-587570:1:exon
subclass of: SO_0000010

position:587136:1
position: 587136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587570:1
position: 587570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587136-587570:1:exon

DMP02_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: erpA
locus tag: DMP02_RS02725
old locus tag: RVIR1_05590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597252.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
translation: MYNCYAYSTIHLKIMSEALQQQVTPQVEPAAQVVTITENAVNKVWELIQEEDNLALKLRVFITGGGCSGFQYGFTFDEVQNEDDTVVSKQAVGSGTVQLLIDPMSLQYLMGAEIDYKSDLSGEQFIIRNPNAKTTCGCGSSFAA
SIO_010081: DMP02_RS02725
subclass of: SO_0000673
so part of: DMP02_RS02725
location: 587136..587570
location: region:587136-587570:1
so has part: feature:587136-587570:1:exon

WP_232019604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587136-587570:1:exon

DMP02_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02730
old locus tag: RVIR1_05600
so part of: sequence
location: complement(587512..588279)
location: region:587512-588279:-1
so has part: feature:587512-588279:-1:exon
subclass of: SO_0000010

position:587512:-1
position: 587512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588279:-1
position: 588279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587512-588279:-1:exon

DMP02_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02730
old locus tag: RVIR1_05600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidative stress defense protein
translation: MKLKTLILATIALGILPLTLPAKAGELPEGPHIVTSGTSSVEATPNMATISIEVSVSANNAAEAKKQVDLRVAQYFDFLRQNDIEKKDINAANLNTQPEYDYPKTGQAVLKGYRAVRQVQVTVRQIDKLNPLLDGALKLGLNEINAIKFGVANPSIYRQQARQKAIENAISVADSLAEGFKVKRGPIYSIRYSVANDQARHIVLMYKSSEANSAKTYEQETIHFDDQVDVVFELENPKQQMMNHSHRWSSHLGCG
SIO_010081: DMP02_RS02730
subclass of: SO_0000673
so part of: DMP02_RS02730
location: complement(587512..588279)
location: region:587512-588279:-1
so has part: feature:587512-588279:-1:exon

WP_126322556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587512-588279:-1:exon

DMP02_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02735
old locus tag: RVIR1_05610
so part of: sequence
location: complement(588320..589435)
location: region:588320-589435:-1
so has part: feature:588320-589435:-1:exon
subclass of: SO_0000010

position:588320:-1
position: 588320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589435:-1
position: 589435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588320-589435:-1:exon

DMP02_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02735
old locus tag: RVIR1_05610
EC number: 2.7.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006034721.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anhydro-N-acetylmuramic acid kinase
translation: MKKLYIGLMSGTSMDAVDTALVDFSDGTPKLIATHKTHLSPELRGALNQLCATDSPKITQLAELDVKMAHVFADATKTLLAKTSFSKKDILAIGSHGQTVFHYPQSNYPFSIQIGDPNIIAEKTGITTIADFRRRDIAAGGQGAPLTPAFHNFMFRSEKEDRIVLNLGGIANITYLPANTKSPIIGFDTGPANLLLDKWIYEHQRQWFDEDGNWAASASFDDKLLQQFLSDPYFHLAPPKSTGHDYFNLNWLKSQLIQGRKSLPPATVQATLCELTAASIGIAIQQLDSEQGSILLCGGGSKNTYLKKRLENHCPKHQIYPCDDLQFPAEWIEAMAFAWFAKQTLEGKTSNLPEVTGARNPTVLGGIYLKA
SIO_010081: DMP02_RS02735
subclass of: SO_0000673
so part of: DMP02_RS02735
location: complement(588320..589435)
location: region:588320-589435:-1
so has part: feature:588320-589435:-1:exon

WP_126322557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588320-589435:-1:exon

DMP02_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rnpB
locus tag: DMP02_RS02740
old locus tag: RVIR1_05620
so part of: sequence
location: 589748..590305
location: region:589748-590305:1
so has part: feature:589748-590305:1:exon
subclass of: SO_0000011

position:589748:1
position: 589748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590305:1
position: 590305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589748-590305:1:exon

DMP02_RS02740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 676208
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: DMP02_RS02740
old locus tag: RVIR1_05620
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DMP02_RS02740
subclass of: SO_0000673
so part of: DMP02_RS02740
location: 589748..590305
location: region:589748-590305:1
so has part: feature:589748-590305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589748-590305:1:exon

DMP02_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02745
old locus tag: RVIR1_05640
so part of: sequence
location: 590593..591282
location: region:590593-591282:1
so has part: feature:590593-591282:1:exon
subclass of: SO_0000010

position:590593:1
position: 590593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591282:1
position: 591282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590593-591282:1:exon

DMP02_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02745
old locus tag: RVIR1_05640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIILKYFIASIRYFLMITLSSIVLLPNVIFAQTMNKNDTYGFSMCHPWFVTGELGYSNYLDMYFSDGQTPVGRFSFGRELGQAGILNFGLEVGIQNGNTMRFRVDIAHTEDFGYVFDVSAKPVMDLLLTVKTNTFSDQVPVFALFKVGPAYQRWIITDRDTIDDRTKVSLEVQAGLGYWVNNRTNISLSYQRIFGSHPNFYVKADAETAYISQIPTQYAVLLGISVQF
SIO_010081: DMP02_RS02745
subclass of: SO_0000673
so part of: DMP02_RS02745
location: 590593..591282
location: region:590593-591282:1
so has part: feature:590593-591282:1:exon

WP_145985126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590593-591282:1:exon

DMP02_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02750
old locus tag: RVIR1_05650
so part of: sequence
location: 591319..592503
location: region:591319-592503:1
so has part: feature:591319-592503:1:exon
subclass of: SO_0000010

position:591319:1
position: 591319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592503:1
position: 592503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591319-592503:1:exon

DMP02_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02750
old locus tag: RVIR1_05650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKEGQQNQRDYPSGFLSQLRRFLGYSRENSPRFSNRNPLQRSEVLNELKKHAGIFDQRLAEVNSGERVTLGNEVSLWGEITSILNKGGRNPLQRTAVLEALKKFGDMFDRKLAVKNSGNLPALEKKIAALENQRADLTTKNTQLEIQNKLEKQAKEVAEKQAIEAMAAKEKAETQATEAMTAKEKAENRSAADKAVKEAAEKQTIEAIAVKEKAENQSAADKAAKEVAETKMAEATVAKAVAEKQAIEAMAAKEKAENQSAADKVTKEVAEIQVKELNGKLLTEMKRKDSLVELIKKQVDPAADKARSKIIEDYSLSKDCLHEFATTVEDEKEYLTLMGYKIISTGTVKPKWAQHVLGNFKEVSDKLLNTLQSDNTSHQEVREELEKLLKGGL
SIO_010081: DMP02_RS02750
subclass of: SO_0000673
so part of: DMP02_RS02750
location: 591319..592503
location: region:591319-592503:1
so has part: feature:591319-592503:1:exon

WP_126322559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591319-592503:1:exon

DMP02_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: mraZ
locus tag: DMP02_RS02755
old locus tag: RVIR1_05660
so part of: sequence
location: 592839..593294
location: region:592839-593294:1
so has part: feature:592839-593294:1:exon
subclass of: SO_0000010

position:592839:1
position: 592839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593294:1
position: 593294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592839-593294:1:exon

DMP02_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: mraZ
locus tag: DMP02_RS02755
old locus tag: RVIR1_05660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011213343.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0051302 - regulation of cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division/cell wall cluster transcriptional repressor MraZ
translation: MFRGINSVVLDAKGRVKLPARHRRLLPTDKALEVVVTIDTESPCLLLYPIQEWELIEEKLQALPSFNPAARRIQRLLIGHATDLELDTNGRILLPALLRDYAHIDKDIRVIGQGRKLELWSAKEWDEYRARWIVEAIKPGDLPDELQSLAL
SIO_010081: DMP02_RS02755
subclass of: SO_0000673
so part of: DMP02_RS02755
location: 592839..593294
location: region:592839-593294:1
so has part: feature:592839-593294:1:exon

WP_126322560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592839-593294:1:exon

DMP02_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: rsmH
locus tag: DMP02_RS02760
old locus tag: RVIR1_05670
so part of: sequence
location: 593325..594260
location: region:593325-594260:1
so has part: feature:593325-594260:1:exon
subclass of: SO_0000010

position:593325:1
position: 593325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594260:1
position: 594260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593325-594260:1:exon

DMP02_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: rsmH
locus tag: DMP02_RS02760
old locus tag: RVIR1_05670
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035467.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MQIKEEHQPVLLEEVIEHLAIKPDGIYIDATFGRGGHTREILKHLGGKGRLFVIDKDPAAVAYAKQHWGQDPRLQICAGSFSKIGEIAKANRIVGQVDGLLLDLGVSSPQLDQAERGFSFLRDGPLDMRMDPNHGISAAQWLACAREKEIAQVLKDYGEERYAKRIAKAIDAARQQTPITTTVQLAEIVKRAHPRWERHKHPATQTFQAIRIWINKELEDLQTCLEQSLDILSIGGRLVVISFHSLEDRIVKRFIRKHSSEPAELKRLAIIPTEWRPRLKSLGRGIKSDAQAIAKNPRSRSAVLRIGEKLL
SIO_010081: DMP02_RS02760
subclass of: SO_0000673
so part of: DMP02_RS02760
location: 593325..594260
location: region:593325-594260:1
so has part: feature:593325-594260:1:exon

WP_126322561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593325-594260:1:exon

DMP02_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
gene: ftsL
locus tag: DMP02_RS02765
old locus tag: RVIR1_05680
so part of: sequence
location: 594257..594604
location: region:594257-594604:1
so has part: feature:594257-594604:1:exon
subclass of: SO_0000010

position:594257:1
position: 594257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594604:1
position: 594604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594257-594604:1:exon

DMP02_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
gene: ftsL
locus tag: DMP02_RS02765
old locus tag: RVIR1_05680
inference: COORDINATES: protein motif:HMM:NF016860.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsL
translation: MNVAARALAQSPLTWEQGQRWRWRISLQMMGIILLMLAVLSSALSVIYVKASQRNLYSELQSSQQERDHLQTEWSQLLLEENTWAAPLRIQALAQQELGMQLPHTKATVLLTQPT
SIO_010081: DMP02_RS02765
subclass of: SO_0000673
so part of: DMP02_RS02765
location: 594257..594604
location: region:594257-594604:1
so has part: feature:594257-594604:1:exon

WP_126322562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594257-594604:1:exon

DMP02_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02770
old locus tag: RVIR1_05690
so part of: sequence
location: 594620..596368
location: region:594620-596368:1
so has part: feature:594620-596368:1:exon
subclass of: SO_0000010

position:594620:1
position: 594620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596368:1
position: 596368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594620-596368:1:exon

DMP02_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 676208
locus tag: DMP02_RS02770
old locus tag: RVIR1_05690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MGVRNLHSARRTSSNNRWRLGVVVLILLIIAFGLIARLIDLTIINRQFLRKQGNARTVRNLVIPAHRGMILDRHGEPLAISTPVNAVWIYPASFSPNFTQLHSLSQLLQIPAQTIREQARRAQDKEFLYLKRGLNPSLAKQIKLLKIPGVFLQDEYHRYYPEGPVMAHVVGLTNVDDKGQEGLELAYNNWLEGRSGLKKVIKDRLGRVIADVRSIRAPQPGHDLQLSIDKRIQYIAYRELNTGVEKYQADSGSVVVLDVKTGEILAMVNSPSYNPNDRITSQDGRYRNRALTDLFEPGSTIKSFSMASVLASGKFTPSSQVDTSPGWMIVAGKRIMDEHNNGVMDLTKILQISSNMGMSKLVLSLPADNLWRLLHEVGFGQLSQSGFPGERTGSLPNFRVWNPFVLATLSFGYGLSVTALQLAQAYAVLANGGIKVPVTFLKIQGQPPVGQRVIAANISREVLDMLETVLTKGGTAPLARVPGYRVTGKTGTVRIVGAQGYEKHRHNSIFIGIAPASHPRLVVAVVLHDPKGNAYYGGYTAGPIFSHVMCNALHLLNIAPDDLASLNQTPEKVVLPPKGMVD
SIO_010081: DMP02_RS02770
subclass of: SO_0000673
so part of: DMP02_RS02770
location: 594620..596368
location: region:594620-596368:1
so has part: feature:594620-596368:1:exon

WP_126322563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594620-596368:1:exon

DMP02_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 676208
locus tag: DMP02_RS02775
old locus tag: RVIR1_05700
so part of: sequence
location: 596511..597737
location: region:596511-597737:1
so has part: feature:596511-597737:1:exon
subclass of: SO_0000010

position:596511:1
position: 596511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597737:1
position: 597737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596511-597737:1:exon