Bacteroides faecis strain BFG-108 plasmid unnamed1, complete sequence.
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.
WGS Sequencing of Bacteroides fragilis Group Isolates
NISC Comparative Sequencing Program, N.I.H.
Submitted (20-AUG-2021) LCIM, National Institute of Allergy and Infectious Diseases, 9000 Rockville Pike, Bethesda, MD 20892, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP081914.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP/FALCON v. v. 6.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 288x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 07:09:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,043\nCDSs (total) :: 4,955\nGenes (coding) :: 4,859\nCDSs (with protein) :: 4,859\nGenes (RNA) :: 88\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 2\nPseudo Genes (total) :: 96\nCDSs (without protein) :: 96\nPseudo Genes (ambiguous residues) :: 0 of 96\nPseudo Genes (frameshifted) :: 27 of 96\nPseudo Genes (incomplete) :: 55 of 96\nPseudo Genes (internal stop) :: 30 of 96\nPseudo Genes (multiple problems) :: 15 of 96\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Department of Laboratory Medicine - NIH Clinical Center
COORDINATES: similar to AA sequence:RefSeq:WP_008671630.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005647355.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004295346.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007557648.1
COORDINATES: similar to AA sequence:RefSeq:WP_011264142.1
COORDINATES: similar to AA sequence:RefSeq:WP_007660158.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004295357.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_004295359.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765230.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765229.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295363.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559092.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559096.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559098.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559101.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295365.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765225.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004295368.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559113.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765224.1
COORDINATES: similar to AA sequence:RefSeq:WP_008675930.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295374.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295375.1
COORDINATES: similar to AA sequence:RefSeq:WP_008671657.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765218.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765217.1
COORDINATES: similar to AA sequence:RefSeq:WP_008765216.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647318.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559134.1
COORDINATES: similar to AA sequence:RefSeq:WP_008675920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008656891.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647329.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647331.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647332.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011264154.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559152.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011264151.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647345.1
COORDINATES: similar to AA sequence:RefSeq:WP_008671625.1
topoisomerase C-terminal repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004295339.1
COORDINATES: similar to AA sequence:RefSeq:WP_004295340.1
COORDINATES: similar to AA sequence:RefSeq:WP_008671628.1
COORDINATES: similar to AA sequence:RefSeq:WP_005647353.1