Procambarus clarkii strain Jiangsu linkage group LG79, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035551.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123774712, transcript variant X2
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC123774712, transcript variant X1
uncharacterized protein LOC123774712 isoform X1
uncharacterized protein LOC123774712 isoform X2
tropomodulin-like, transcript variant X2
tropomodulin-like, transcript variant X1
tropomodulin-like, transcript variant X6
tropomodulin-like, transcript variant X5
tropomodulin-like, transcript variant X9
tropomodulin-like, transcript variant X8
tropomodulin-like, transcript variant X4
tropomodulin-like, transcript variant X10
tropomodulin-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
tropomodulin-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase-like
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like, transcript variant X1
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like, transcript variant X4
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like, transcript variant X2
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like, transcript variant X3
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like isoform X1
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like isoform X2
uncharacterized LOC123774717, transcript variant X2
uncharacterized LOC123774717, transcript variant X4
uncharacterized LOC123774717, transcript variant X3
uncharacterized LOC123774717, transcript variant X1
FERM domain-containing protein 5-like, transcript variant X1
FERM domain-containing protein 5-like, transcript variant X2
FERM domain-containing protein 5-like isoform X1
FERM domain-containing protein 5-like isoform X2
nucleolar and spindle-associated protein 1-like, transcript variant X1
nucleolar and spindle-associated protein 1-like, transcript variant X2
nucleolar and spindle-associated protein 1-like
zinc finger protein Xfin-like, transcript variant X2
zinc finger protein Xfin-like, transcript variant X1
zinc finger protein Xfin-like isoform X1
zinc finger protein Xfin-like isoform X2
general transcription and DNA repair factor IIH helicase subunit XPD-like
adhesion G protein-coupled receptor L3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
DNA-directed RNA polymerase II subunit RPB1-like
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized transmembrane protein DDB_G0289901-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123774700, transcript variant X2
uncharacterized LOC123774700, transcript variant X1
uncharacterized protein LOC123774700 isoform X2
uncharacterized protein LOC123774700 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
RNA-binding protein 26-like, transcript variant X1
RNA-binding protein 26-like, transcript variant X5
RNA-binding protein 26-like, transcript variant X6
RNA-binding protein 26-like, transcript variant X3
RNA-binding protein 26-like, transcript variant X2
RNA-binding protein 26-like, transcript variant X4
uncharacterized LOC123774702, transcript variant X2
uncharacterized LOC123774702, transcript variant X1
uncharacterized protein LOC123774702 isoform X1
uncharacterized protein LOC123774702 isoform X2
doublesex- and mab-3-related transcription factor 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
histone-lysine N-methyltransferase MECOM-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
steroidogenic acute regulatory protein-like, transcript variant X3
steroidogenic acute regulatory protein-like, transcript variant X2
steroidogenic acute regulatory protein-like, transcript variant X1
steroidogenic acute regulatory protein-like isoform X1
steroidogenic acute regulatory protein-like isoform X2
steroidogenic acute regulatory protein-like, transcript variant X4
steroidogenic acute regulatory protein-like isoform X3
uncharacterized LOC123774734, transcript variant X3
uncharacterized LOC123774734, transcript variant X2
uncharacterized LOC123774734, transcript variant X1
uncharacterized protein LOC123774734 isoform X3
uncharacterized protein LOC123774734 isoform X2
uncharacterized protein LOC123774734 isoform X1
baculoviral IAP repeat-containing protein 3-like
murinoglobulin-2-like, transcript variant X1
murinoglobulin-2-like, transcript variant X4
murinoglobulin-2-like, transcript variant X2
murinoglobulin-2-like, transcript variant X3
probable ATP-dependent RNA helicase DDX43
leucine-rich repeat extensin-like protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
acyl-coenzyme A diphosphatase FITM2-like
ganglioside-induced differentiation-associated protein 1-like
GPI mannosyltransferase 3-like, transcript variant X3
GPI mannosyltransferase 3-like, transcript variant X1
GPI mannosyltransferase 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X1
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X3
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X2
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X4
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X6
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X7
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X9
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X8
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X10
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X11
heterogeneous nuclear ribonucleoprotein L-like isoform X1
heterogeneous nuclear ribonucleoprotein L-like isoform X3
heterogeneous nuclear ribonucleoprotein L-like isoform X2
heterogeneous nuclear ribonucleoprotein L-like isoform X4
heterogeneous nuclear ribonucleoprotein L-like isoform X6
heterogeneous nuclear ribonucleoprotein L-like isoform X7
heterogeneous nuclear ribonucleoprotein L-like isoform X9
heterogeneous nuclear ribonucleoprotein L-like isoform X8
heterogeneous nuclear ribonucleoprotein L-like isoform X10
heterogeneous nuclear ribonucleoprotein L-like isoform X11
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X12
heterogeneous nuclear ribonucleoprotein L-like isoform X12
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X5
heterogeneous nuclear ribonucleoprotein L-like isoform X5
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X13
heterogeneous nuclear ribonucleoprotein L-like isoform X13
heterogeneous nuclear ribonucleoprotein L-like, transcript variant X14
heterogeneous nuclear ribonucleoprotein L-like isoform X14
integrin alpha-PS3-like, transcript variant X1
integrin alpha-PS3-like, transcript variant X2
integrin alpha-PS3-like, transcript variant X3
major facilitator superfamily domain-containing protein 12-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
major facilitator superfamily domain-containing protein 12-like
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
alpha-methylacyl-CoA racemase-like, transcript variant X2
alpha-methylacyl-CoA racemase-like, transcript variant X1
alpha-methylacyl-CoA racemase-like, transcript variant X3
alpha-methylacyl-CoA racemase-like isoform X1
alpha-methylacyl-CoA racemase-like isoform X2
mitochondrial coenzyme A transporter SLC25A42-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
mitochondrial coenzyme A transporter SLC25A42-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
mitochondrial coenzyme A transporter SLC25A42-like isoform X1
mitochondrial coenzyme A transporter SLC25A42-like isoform X2
serine/threonine-protein kinase BRSK2-like, transcript variant X1
serine/threonine-protein kinase BRSK2-like, transcript variant X2
serine/threonine-protein kinase BRSK2-like isoform X2
serine/threonine-protein kinase BRSK2-like isoform X1
basic salivary proline-rich protein 1-like
kelch domain-containing protein 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
kelch domain-containing protein 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
MAM and LDL-receptor class A domain-containing protein 2-like
pollen-specific leucine-rich repeat extensin-like protein 1
doublesex and mab-3 related transcription factor 3, truncated-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
SET and MYND domain-containing protein 4-like, transcript variant X1
SET and MYND domain-containing protein 4-like, transcript variant X3
SET and MYND domain-containing protein 4-like, transcript variant X2
SET and MYND domain-containing protein 4-like, transcript variant X4
SET and MYND domain-containing protein 4-like isoform X1
SET and MYND domain-containing protein 4-like isoform X3
SET and MYND domain-containing protein 4-like isoform X2
SET and MYND domain-containing protein 4-like isoform X4
G-protein coupled receptor Mth2-like, transcript variant X4
G-protein coupled receptor Mth2-like, transcript variant X3
G-protein coupled receptor Mth2-like, transcript variant X2
G-protein coupled receptor Mth2-like, transcript variant X1
G-protein coupled receptor Mth2-like isoform X4
G-protein coupled receptor Mth2-like isoform X3
G-protein coupled receptor Mth2-like isoform X2
G-protein coupled receptor Mth2-like isoform X1
DNA ligase 1-like, transcript variant X2
DNA ligase 1-like, transcript variant X1
vicilin-like seed storage protein At2g18540
adenosine deaminase-like, transcript variant X2
adenosine deaminase-like, transcript variant X1
adenosine deaminase-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol-glycan biosynthesis class F protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
39S ribosomal protein L9, mitochondrial-like
voltage-dependent calcium channel gamma-7 subunit-like
sortilin-related receptor-like, transcript variant X2
sortilin-related receptor-like, transcript variant X1
sortilin-related receptor-like isoform X2
sortilin-related receptor-like isoform X1
sortilin-related receptor-like, transcript variant X3
sortilin-related receptor-like isoform X3
peptidylprolyl isomerase domain and WD repeat-containing protein 1-like, transcript variant X3
peptidylprolyl isomerase domain and WD repeat-containing protein 1-like, transcript variant X2
peptidylprolyl isomerase domain and WD repeat-containing protein 1-like, transcript variant X1
peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
poly(ADP-ribose) glycohydrolase-like, transcript variant X2
poly(ADP-ribose) glycohydrolase-like isoform X2
poly(ADP-ribose) glycohydrolase-like, transcript variant X3
poly(ADP-ribose) glycohydrolase-like, transcript variant X7
poly(ADP-ribose) glycohydrolase-like isoform X3
poly(ADP-ribose) glycohydrolase-like, transcript variant X6
poly(ADP-ribose) glycohydrolase-like, transcript variant X4
poly(ADP-ribose) glycohydrolase-like, transcript variant X1
poly(ADP-ribose) glycohydrolase-like, transcript variant X5
poly(ADP-ribose) glycohydrolase-like, transcript variant X8
poly(ADP-ribose) glycohydrolase-like isoform X1
poly(ADP-ribose) glycohydrolase-like isoform X4
poly(ADP-ribose) glycohydrolase-like isoform X5
poly(ADP-ribose) glycohydrolase-like isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
histone-lysine N-methyltransferase 2D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123774778, transcript variant X2
uncharacterized LOC123774778, transcript variant X1
uncharacterized protein LOC123774778 isoform X2
uncharacterized protein LOC123774778 isoform X1
G-protein coupled receptor 52-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
G-protein coupled receptor 52-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
G-protein coupled receptor 52-like isoform X2
G-protein coupled receptor 52-like isoform X1
pumilio homolog 2-like, transcript variant X1
pumilio homolog 2-like, transcript variant X4
pumilio homolog 2-like, transcript variant X2
pumilio homolog 2-like, transcript variant X9
pumilio homolog 2-like, transcript variant X3
pumilio homolog 2-like, transcript variant X5
pumilio homolog 2-like, transcript variant X6
pumilio homolog 2-like, transcript variant X7
pumilio homolog 2-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein Star-like, transcript variant X1
protein Star-like, transcript variant X2
segment polarity protein dishevelled homolog DVL-3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
golgin subfamily A member 6-like protein 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123774708, transcript variant X1
uncharacterized LOC123774708, transcript variant X2
uncharacterized protein LOC123774708 isoform X1
uncharacterized protein LOC123774708 isoform X2
uncharacterized LOC123774709, transcript variant X1
uncharacterized LOC123774709, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123774787, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123774787, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized protein LOC123774787 isoform X1
uncharacterized protein LOC123774787 isoform X2
4-hydroxy-2-oxoglutarate aldolase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like, transcript variant X2
phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like
uncharacterized LOC123774794, transcript variant X2
uncharacterized protein LOC123774794 isoform X2
uncharacterized LOC123774794, transcript variant X1
uncharacterized protein LOC123774794 isoform X1
zinc transporter 2-like, transcript variant X3
zinc transporter 2-like, transcript variant X5
zinc transporter 2-like, transcript variant X4
zinc transporter 2-like, transcript variant X2
zinc transporter 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
anther-specific proline-rich protein APG-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
uncharacterized LOC123774798, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123774798, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 283 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
serine/arginine-rich splicing factor 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
plasma membrane calcium-transporting ATPase 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
plasma membrane calcium-transporting ATPase 2-like, transcript variant X3
plasma membrane calcium-transporting ATPase 2-like, transcript variant X2
plasma membrane calcium-transporting ATPase 2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
plasma membrane calcium-transporting ATPase 2-like isoform X4
plasma membrane calcium-transporting ATPase 2-like isoform X1
plasma membrane calcium-transporting ATPase 2-like isoform X3
plasma membrane calcium-transporting ATPase 2-like isoform X2
peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like
cohesin subunit SA-2-like, transcript variant X3
cohesin subunit SA-2-like, transcript variant X2
cohesin subunit SA-2-like, transcript variant X1
hydroxyacid oxidase 1-like, transcript variant X1
hydroxyacid oxidase 1-like, transcript variant X2
potassium voltage-gated channel unc-103-like, transcript variant X1
potassium voltage-gated channel unc-103-like, transcript variant X2
potassium voltage-gated channel subfamily H member 6-like isoform X1
potassium voltage-gated channel unc-103-like isoform X2
similar to RNA sequence (same species):INSD:GBEV01129033.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 174 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 174 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X4
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X8
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X7
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X3
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X5
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X6
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X9
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X2
high mobility group nucleosome-binding domain-containing protein 5-like, transcript variant X1
high mobility group nucleosome-binding domain-containing protein 5-like isoform X9
golgin subfamily A member 6-like protein 22 isoform X6
golgin subfamily A member 6-like protein 6 isoform X2
golgin subfamily A member 6-like protein 1 isoform X8
golgin subfamily A member 6-like protein 1 isoform X7
golgin subfamily A member 6-like protein 22 isoform X1
CDGSH iron-sulfur domain-containing protein 2 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
regulator of telomere elongation helicase 1 homolog, transcript variant X4
regulator of telomere elongation helicase 1 homolog, transcript variant X1
regulator of telomere elongation helicase 1 homolog, transcript variant X2
regulator of telomere elongation helicase 1 homolog, transcript variant X3
regulator of telomere elongation helicase 1 homolog isoform X1
regulator of telomere elongation helicase 1 homolog isoform X2
phosphatidylinositol-3-phosphatase SAC1-like
nuclear hormone receptor FTZ-F1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
nuclear hormone receptor FTZ-F1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
nuclear hormone receptor FTZ-F1-like isoform X2
nuclear hormone receptor FTZ-F1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
serine-aspartate repeat-containing protein I-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
asparagine--tRNA ligase, cytoplasmic-like, transcript variant X1
asparagine--tRNA ligase, cytoplasmic-like, transcript variant X2
asparagine--tRNA ligase, cytoplasmic-like isoform X1
asparagine--tRNA ligase, cytoplasmic-like isoform X2
dual specificity protein phosphatase 23-like, transcript variant X1
dual specificity protein phosphatase 23-like, transcript variant X2
dual specificity protein phosphatase 23-like
oxysterol-binding protein-related protein 1-like, transcript variant X2
oxysterol-binding protein-related protein 1-like, transcript variant X1
oxysterol-binding protein-related protein 1-like, transcript variant X3
oxysterol-binding protein-related protein 1-like isoform X1
oxysterol-binding protein-related protein 1-like isoform X2
oxysterol-binding protein-related protein 1-like