Procambarus clarkii strain Jiangsu linkage group LG74, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035546.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIF subunit 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
putative uncharacterized protein YKL202W
protein phosphatase 1H-like, transcript variant X1
protein phosphatase 1H-like, transcript variant X3
protein phosphatase 1H-like, transcript variant X2
putative ferric-chelate reductase 1 homolog, transcript variant X1
putative ferric-chelate reductase 1 homolog, transcript variant X2
putative ferric-chelate reductase 1 homolog, transcript variant X3
putative ferric-chelate reductase 1 homolog isoform X1
putative ferric-chelate reductase 1 homolog isoform X2
putative ferric-chelate reductase 1 homolog isoform X3
suppressor of lurcher protein 1-like, transcript variant X7
suppressor of lurcher protein 1-like, transcript variant X4
suppressor of lurcher protein 1-like, transcript variant X5
suppressor of lurcher protein 1-like, transcript variant X6
suppressor of lurcher protein 1-like, transcript variant X9
suppressor of lurcher protein 1-like, transcript variant X2
suppressor of lurcher protein 1-like, transcript variant X8
suppressor of lurcher protein 1-like, transcript variant X3
suppressor of lurcher protein 1-like, transcript variant X1
juvenile hormone esterase-like, transcript variant X1
juvenile hormone esterase-like, transcript variant X3
juvenile hormone esterase-like isoform X1
juvenile hormone esterase-like isoform X3
juvenile hormone esterase-like, transcript variant X2
juvenile hormone esterase-like isoform X2
uncharacterized LOC123773625, transcript variant X1
uncharacterized LOC123773625, transcript variant X2
uncharacterized protein LOC123773625 isoform X2
uncharacterized protein LOC123773625 isoform X1
guanine nucleotide exchange factor DBS-like, transcript variant X3
guanine nucleotide exchange factor DBS-like, transcript variant X2
guanine nucleotide exchange factor DBS-like, transcript variant X1
guanine nucleotide exchange factor DBS-like, transcript variant X4
guanine nucleotide exchange factor DBS-like, transcript variant X5
guanine nucleotide exchange factor DBS-like, transcript variant X6
guanine nucleotide exchange factor DBS-like isoform X4
guanine nucleotide exchange factor DBS-like isoform X3
guanine nucleotide exchange factor DBS-like isoform X2
guanine nucleotide exchange factor DBS-like isoform X5
uncharacterized protein LOC123773626 isoform X1
guanine nucleotide exchange factor DBS-like isoform X6
uncharacterized LOC123773628, transcript variant X2
uncharacterized LOC123773628, transcript variant X1
myosin heavy chain, striated muscle-like, transcript variant X3
myosin heavy chain, striated muscle-like, transcript variant X1
myosin heavy chain, striated muscle-like, transcript variant X2
myosin heavy chain, striated muscle-like, transcript variant X4
myosin heavy chain, striated muscle-like isoform X1
myosin heavy chain, striated muscle-like isoform X2
myosin heavy chain, striated muscle-like isoform X3
aromatic-L-amino-acid decarboxylase-like
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
probable cytochrome P450 49a1, transcript variant X2
probable cytochrome P450 49a1, transcript variant X1
probable cytochrome P450 49a1, transcript variant X3
probable cytochrome P450 49a1 isoform X1
probable cytochrome P450 49a1 isoform X2
uncharacterized LOC123773639, transcript variant X1
uncharacterized LOC123773639, transcript variant X3
uncharacterized LOC123773639, transcript variant X2
uncharacterized protein LOC123773639 isoform X2
uncharacterized protein LOC123773639 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
acidic leucine-rich nuclear phosphoprotein 32 family member B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
phosphopantothenoylcysteine decarboxylase subunit VHS3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
myotubularin-related protein DDB_G0290005-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
lateral signaling target protein 2 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123773656, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123773656, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
endoribonuclease Dicer-like, transcript variant X2
endoribonuclease Dicer-like, transcript variant X1
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2-like, transcript variant X2
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2-like, transcript variant X1
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2-like
pre-mRNA-splicing factor SLU7-like, transcript variant X1
pre-mRNA-splicing factor SLU7-like, transcript variant X3
pre-mRNA-splicing factor SLU7-like, transcript variant X2
39S ribosomal protein L39, mitochondrial-like
similar to RNA sequence (same species):INSD:GBEV01012040.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 165 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 165 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
vitelline membrane outer layer protein 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
peroxisomal membrane protein 11C-like, transcript variant X2
peroxisomal membrane protein 11C-like, transcript variant X1
peroxisomal membrane protein 11C-like, transcript variant X3
peroxisomal membrane protein 11C-like isoform X1
peroxisomal membrane protein 11C-like isoform X2
DNA repair protein XRCC2-like, transcript variant X2
DNA repair protein XRCC2-like, transcript variant X1
uncharacterized LOC123773670, transcript variant X1
uncharacterized LOC123773670, transcript variant X2
uncharacterized LOC123773669, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
uncharacterized LOC123773669, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
intraflagellar transport protein 20 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123773674, transcript variant X1
uncharacterized LOC123773674, transcript variant X2
tight junction protein ZO-1-like, transcript variant X4
tight junction protein ZO-1-like, transcript variant X2
tight junction protein ZO-1-like, transcript variant X10
tight junction protein ZO-1-like, transcript variant X8
tight junction protein ZO-1-like, transcript variant X6
tight junction protein ZO-1-like, transcript variant X1
tight junction protein ZO-1-like, transcript variant X3
tight junction protein ZO-1-like, transcript variant X5
tight junction protein ZO-1-like, transcript variant X9
tight junction protein ZO-1-like isoform X4
tight junction protein ZO-1-like isoform X2
tight junction protein ZO-1-like isoform X10
tight junction protein ZO-1-like isoform X8
tight junction protein ZO-1-like isoform X6
tight junction protein ZO-1-like isoform X1
tight junction protein ZO-1-like isoform X3
tight junction protein ZO-1-like isoform X5
tight junction protein ZO-1-like isoform X9
tight junction protein ZO-1-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
tight junction protein ZO-2-like isoform X7
probable H/ACA ribonucleoprotein complex subunit 1
AP-3 complex subunit sigma-2-like, transcript variant X3
AP-3 complex subunit sigma-2-like, transcript variant X4
AP-3 complex subunit sigma-2-like, transcript variant X1
AP-3 complex subunit sigma-2-like, transcript variant X2
AP-3 complex subunit sigma-2-like isoform X2
AP-3 complex subunit sigma-2-like isoform X1
AP-3 complex subunit sigma-2-like isoform X3
AP-3 complex subunit sigma-2-like isoform X4
RUN and FYVE domain-containing protein 2-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
RUN and FYVE domain-containing protein 2-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
RUN and FYVE domain-containing protein 2-like, transcript variant X4
RUN and FYVE domain-containing protein 2-like, transcript variant X3
RUN and FYVE domain-containing protein 2-like, transcript variant X1
RUN and FYVE domain-containing protein 2-like, transcript variant X2
RUN and FYVE domain-containing protein 2-like, transcript variant X5
RUN and FYVE domain-containing protein 2-like isoform X2
RUN and FYVE domain-containing protein 2-like isoform X1
RUN and FYVE domain-containing protein 2-like isoform X3
RUN and FYVE domain-containing protein 2-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate dehydrogenase, mitochondrial-like, transcript variant X3
glutamate dehydrogenase, mitochondrial-like, transcript variant X4
glutamate dehydrogenase, mitochondrial-like, transcript variant X1
glutamate dehydrogenase, mitochondrial-like, transcript variant X2
glutamate dehydrogenase, mitochondrial-like isoform X3
glutamate dehydrogenase, mitochondrial-like isoform X1
glutamate dehydrogenase, mitochondrial-like isoform X2
mitochondrial Rho GTPase-like, transcript variant X3
mitochondrial Rho GTPase-like, transcript variant X4
mitochondrial Rho GTPase-like, transcript variant X1
mitochondrial Rho GTPase-like, transcript variant X5
mitochondrial Rho GTPase-like isoform X4
mitochondrial Rho GTPase-like isoform X1
mitochondrial Rho GTPase-like isoform X5
mitochondrial Rho GTPase-like, transcript variant X2
mitochondrial Rho GTPase 1-like isoform X2
mitochondrial Rho GTPase 1-like isoform X3
phospholipase A2-like, transcript variant X3
phospholipase A2-like, transcript variant X2
phospholipase A2-like, transcript variant X1
aminopeptidase N-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
aminopeptidase N-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
aminopeptidase N-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123773696, transcript variant X2
uncharacterized LOC123773696, transcript variant X3
uncharacterized LOC123773696, transcript variant X1
uncharacterized protein LOC123773696 isoform X2
uncharacterized protein LOC123773696 isoform X1
DNA topoisomerase 2-alpha-like, transcript variant X2
DNA topoisomerase 2-alpha-like isoform X2
DNA topoisomerase 2-alpha-like, transcript variant X1
DNA topoisomerase 2-alpha-like, transcript variant X3
DNA topoisomerase 2-alpha-like isoform X1
DNA topoisomerase 2-alpha-like isoform X3
cilia- and flagella-associated protein 20
serine-rich adhesin for platelets-like, transcript variant X6
serine-rich adhesin for platelets-like isoform X6
serine-rich adhesin for platelets-like, transcript variant X8
serine-rich adhesin for platelets-like, transcript variant X7
serine-rich adhesin for platelets-like isoform X7
serine-rich adhesin for platelets-like, transcript variant X2
serine-rich adhesin for platelets-like, transcript variant X1
serine-rich adhesin for platelets-like, transcript variant X4
serine-rich adhesin for platelets-like, transcript variant X3
serine-rich adhesin for platelets-like, transcript variant X5
uncharacterized protein LOC123773700 isoform X1
uncharacterized protein LOC123773700 isoform X4
uncharacterized protein LOC123773700 isoform X3
uncharacterized protein LOC123773700 isoform X5
uncharacterized protein LOC123773700 isoform X2
serine-rich adhesin for platelets-like isoform X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
ATP-binding cassette sub-family F member 2-like
acyl-coenzyme A thioesterase 9, mitochondrial-like, transcript variant X2
acyl-coenzyme A thioesterase 9, mitochondrial-like, transcript variant X1
acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X1
acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 103 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 138 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
uncharacterized LOC123773711, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
uncharacterized LOC123773711, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
uncharacterized protein LOC123773711 isoform X2
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X1
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X2
peptidyl-prolyl cis-trans isomerase FKBP4-like
uncharacterized protein LOC123773711 isoform X1
methyltransferase-like protein 17, mitochondrial
venom dipeptidyl peptidase 4-like, transcript variant X3
venom dipeptidyl peptidase 4-like, transcript variant X2
venom dipeptidyl peptidase 4-like, transcript variant X1
venom dipeptidyl peptidase 4-like, transcript variant X4
venom dipeptidyl peptidase 4-like isoform X3
venom dipeptidyl peptidase 4-like isoform X2
venom dipeptidyl peptidase 4-like isoform X1
venom dipeptidyl peptidase 4-like isoform X4
uncharacterized LOC123773716, transcript variant X2
uncharacterized LOC123773716, transcript variant X1
uncharacterized protein LOC123773716 isoform X2
uncharacterized protein LOC123773716 isoform X1
uncharacterized LOC123773718, transcript variant X1
uncharacterized LOC123773718, transcript variant X2
uncharacterized protein LOC123773718 isoform X1
uncharacterized protein LOC123773718 isoform X2
uncharacterized LOC123773721, transcript variant X1
uncharacterized LOC123773721, transcript variant X2
lysosome membrane protein 2-like, transcript variant X1
lysosome membrane protein 2-like isoform X1
lysosome membrane protein 2-like, transcript variant X2
lysosome membrane protein 2-like isoform X2
neuroblast differentiation-associated protein AHNAK-like, transcript variant X1
neuroblast differentiation-associated protein AHNAK-like, transcript variant X2
neuroblast differentiation-associated protein AHNAK-like isoform X1
neuroblast differentiation-associated protein AHNAK-like isoform X2
uncharacterized LOC123773726, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC123773726, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
uncharacterized LOC123773726, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC123773726 isoform X1
uncharacterized protein LOC123773726 isoform X2
uncharacterized protein LOC123773726 isoform X3
uncharacterized LOC123773727, transcript variant X1
uncharacterized LOC123773727, transcript variant X2
ADP-ribosylation factor-like protein 6-interacting protein 1
uncharacterized LOC123773730, transcript variant X1
uncharacterized protein LOC123773730 isoform X1
uncharacterized LOC123773730, transcript variant X2
uncharacterized protein LOC123773730 isoform X2
uncharacterized LOC123773729, transcript variant X2
uncharacterized LOC123773729, transcript variant X1
uncharacterized protein LOC123773729 isoform X1
uncharacterized protein LOC123773729 isoform X2
uncharacterized LOC123773729, transcript variant X3
dolichyl-phosphate beta-glucosyltransferase-like, transcript variant X2
dolichyl-phosphate beta-glucosyltransferase-like, transcript variant X1
dolichyl-phosphate beta-glucosyltransferase-like isoform X1
dolichyl-phosphate beta-glucosyltransferase-like isoform X2
ER degradation-enhancing alpha-mannosidase-like protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X4
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X5
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X6
peptidyl-prolyl cis-trans isomerase FKBP4-like, transcript variant X3
uncharacterized LOC123773736, transcript variant X3
uncharacterized LOC123773736, transcript variant X4
uncharacterized protein LOC123773736 isoform X3
uncharacterized protein LOC123773736 isoform X4
uncharacterized LOC123773736, transcript variant X1
uncharacterized LOC123773736, transcript variant X2
uncharacterized LOC123773736, transcript variant X6
uncharacterized LOC123773736, transcript variant X7
uncharacterized protein LOC123773736 isoform X1
uncharacterized protein LOC123773736 isoform X2
uncharacterized protein LOC123773736 isoform X6
uncharacterized protein LOC123773736 isoform X7
uncharacterized LOC123773736, transcript variant X5
uncharacterized protein LOC123773736 isoform X5
uncharacterized LOC123773736, transcript variant X8
uncharacterized protein LOC123773736 isoform X8
cilia- and flagella-associated protein 58-like
putative RNA-binding protein Luc7-like 2, transcript variant X3
putative RNA-binding protein Luc7-like 2, transcript variant X2
putative RNA-binding protein Luc7-like 2, transcript variant X1
putative RNA-binding protein Luc7-like 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
putative RNA-binding protein Luc7-like 1 isoform X1
putative RNA-binding protein Luc7-like 2 isoform X3
putative RNA-binding protein Luc7-like 2, transcript variant X5
putative RNA-binding protein Luc7-like 2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
putative RNA-binding protein Luc7-like 1 isoform X2
putative RNA-binding protein Luc7-like 2 isoform X4
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X4
nuclear factor NF-kappa-B p105 subunit-like isoform X4
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X6
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X3
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X7
nuclear factor NF-kappa-B p105 subunit-like isoform X6
nuclear factor NF-kappa-B p105 subunit-like isoform X3
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X1
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X2
nuclear factor NF-kappa-B p105 subunit-like isoform X2
nuclear factor NF-kappa-B p105 subunit-like isoform X1
nuclear factor NF-kappa-B p105 subunit-like, transcript variant X5
nuclear factor NF-kappa-B p105 subunit-like isoform X5
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
tubulin beta chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
tubulin beta chain-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 374 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 7B-like, transcript variant X30
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X28
zinc finger and BTB domain-containing protein 7B-like, transcript variant X27
protein tramtrack, beta isoform-like isoform X25
zinc finger and BTB domain-containing protein 7B-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X12
zinc finger and BTB domain-containing protein 7B-like, transcript variant X18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X17
zinc finger and BTB domain-containing protein 7B-like, transcript variant X2
protein tramtrack, beta isoform-like isoform X2
zinc finger and BTB domain-containing protein 7B-like, transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X14
zinc finger and BTB domain-containing protein 7B-like, transcript variant X34
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 7B-like, transcript variant X23
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X32
zinc finger and BTB domain-containing protein 7B-like, transcript variant X22
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X21
zinc finger and BTB domain-containing protein 7B-like, transcript variant X20
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X19
zinc finger and BTB domain-containing protein 7B-like, transcript variant X1
protein tramtrack, beta isoform-like isoform X1
zinc finger and BTB domain-containing protein 7B-like, transcript variant X7
protein tramtrack, beta isoform-like isoform X7
zinc finger and BTB domain-containing protein 7B-like, transcript variant X25
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X23
zinc finger and BTB domain-containing protein 7B-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X10
zinc finger and BTB domain-containing protein 7B-like, transcript variant X29
protein tramtrack, beta isoform-like isoform X27
zinc finger and BTB domain-containing protein 7B-like, transcript variant X21
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 7B-like, transcript variant X16
zinc finger and BTB domain-containing protein 7B-like, transcript variant X19
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
zinc finger protein 865-like isoform X18
zinc finger and BTB domain-containing protein 7B-like, transcript variant X32
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X30
zinc finger and BTB domain-containing protein 7B-like, transcript variant X4
protein tramtrack, beta isoform-like isoform X4
zinc finger and BTB domain-containing protein 7B-like, transcript variant X6
protein tramtrack, beta isoform-like isoform X6
zinc finger and BTB domain-containing protein 7B-like, transcript variant X31
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 7B-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X29
zinc finger and BTB domain-containing protein 7B-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X11
zinc finger and BTB domain-containing protein 7B-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X9
zinc finger and BTB domain-containing protein 7B-like, transcript variant X17
zinc finger and BTB domain-containing protein 7B-like, transcript variant X3
protein tramtrack, beta isoform-like isoform X16
B-cell CLL/lymphoma 6 member B protein-like isoform X3
zinc finger and BTB domain-containing protein 7B-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
zinc finger protein 865-like isoform X13
zinc finger and BTB domain-containing protein 7B-like, transcript variant X24
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X22
zinc finger and BTB domain-containing protein 7B-like, transcript variant X26
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X24
zinc finger and BTB domain-containing protein 7B-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 7B-like isoform X8
zinc finger and BTB domain-containing protein 7B-like, transcript variant X33
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X31
zinc finger and BTB domain-containing protein 7B-like, transcript variant X28
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X26
zinc finger and BTB domain-containing protein 7B-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
protein tramtrack, beta isoform-like isoform X5
fibrous sheath CABYR-binding protein-like, transcript variant X1
fibrous sheath CABYR-binding protein-like, transcript variant X2
fibrous sheath CABYR-binding protein-like isoform X1
fibrous sheath CABYR-binding protein-like isoform X2
uncharacterized LOC123773755, transcript variant X3
uncharacterized LOC123773755, transcript variant X1
uncharacterized LOC123773755, transcript variant X4
uncharacterized LOC123773755, transcript variant X2
uncharacterized LOC123773756, transcript variant X2
uncharacterized LOC123773756, transcript variant X1
GDNF-inducible zinc finger protein 1-like, transcript variant X2
GDNF-inducible zinc finger protein 1-like, transcript variant X1
GDNF-inducible zinc finger protein 1-like, transcript variant X3
GDNF-inducible zinc finger protein 1-like, transcript variant X4
GDNF-inducible zinc finger protein 1-like, transcript variant X5
GDNF-inducible zinc finger protein 1-like
vicilin-like seed storage protein At2g18540
uncharacterized LOC123773764, transcript variant X3
uncharacterized LOC123773764, transcript variant X1
uncharacterized LOC123773764, transcript variant X2
uncharacterized protein LOC123773764 isoform X2
uncharacterized protein LOC123773764 isoform X1
serine/threonine-protein kinase PLK4-like
similar to RNA sequence (same species):INSD:GARH01040415.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 289 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 289 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
sterile alpha motif domain-containing protein 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
aspartate--tRNA ligase, cytoplasmic-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
anaphase-promoting complex subunit 5-like, transcript variant X3
anaphase-promoting complex subunit 5-like, transcript variant X1
anaphase-promoting complex subunit 5-like, transcript variant X2
anaphase-promoting complex subunit 5-like isoform X2
anaphase-promoting complex subunit 5-like isoform X1
heterogeneous nuclear ribonucleoprotein R-like
COORDINATES: nucleotide motif:Rfam:12.0:RF00012
facilitated trehalose transporter Tret1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
uncharacterized LOC123773772, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123773772, transcript variant X2
uncharacterized LOC123773772, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
cholesterol transporter ABCA5-like, transcript variant X3
cholesterol transporter ABCA5-like, transcript variant X2
cholesterol transporter ABCA5-like, transcript variant X1
cholesterol transporter ABCA5-like isoform X1
cholesterol transporter ABCA5-like, transcript variant X4
cholesterol transporter ABCA5-like isoform X2