Procambarus clarkii strain Jiangsu linkage group LG70, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035542.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X8
COORDINATES: polyA evidence [ECO:0006239]
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X9
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X12
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X19
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X20
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X10
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X16
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X7
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X21
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
zinc finger and BTB domain-containing protein 17-like isoform X1
longitudinals lacking protein, isoforms A/B/D/L-like isoform X10
uncharacterized LOC123772615, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123772615, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123772615, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized protein LOC123772615 isoform X1
uncharacterized protein LOC123772615 isoform X3
uncharacterized protein LOC123772615 isoform X2
gastrula zinc finger protein XlCGF57.1-like
gastrula zinc finger protein XlCGF57.1-like, transcript variant X4
gastrula zinc finger protein XlCGF57.1-like, transcript variant X1
gastrula zinc finger protein XlCGF57.1-like, transcript variant X2
gastrula zinc finger protein XlCGF57.1-like, transcript variant X3
uncharacterized LOC123772619, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
uncharacterized LOC123772619, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
uncharacterized LOC123772619, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
tigger transposable element-derived protein 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
zinc finger protein 883-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
zinc finger protein 883-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
zinc finger protein 883-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
phosphopantothenoylcysteine decarboxylase-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: phosphopantothenoylcysteine decarboxylase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
multidrug resistance-associated protein 1-like
similar to RNA sequence (same species):INSD:GBEV01106219.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 786 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 786 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 61% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
probable beta-glucosidase btgE, transcript variant X1
probable beta-glucosidase btgE, transcript variant X2
probable beta-glucosidase btgE isoform X1
uncharacterized protein LOC123772629 isoform X2
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
golgin subfamily A member 6-like protein 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
gastrula zinc finger protein XlCGF58.1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
uncharacterized LOC123772631, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123772631, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit alpha-2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
glycine-rich cell wall structural protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized PPE family protein PPE12-like
gamma-aminobutyric acid type B receptor subunit 2-like
similar to RNA sequence (same species):INSD:GBEV01015931.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 275 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 275 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X2
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X1
gastrula zinc finger protein XlCGF8.2DB-like isoform X1
gastrula zinc finger protein XlCGF8.2DB-like isoform X2
gastrula zinc finger protein XlCGF8.2DB-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zwei Ig domain protein zig-8-like, transcript variant X2
zwei Ig domain protein zig-8-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zwei Ig domain protein zig-8-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zwei Ig domain protein zig-8-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zwei Ig domain protein zig-8-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zwei Ig domain protein zig-8-like, transcript variant X3
zwei Ig domain protein zig-8-like, transcript variant X1
zwei Ig domain protein zig-8-like isoform X4
zwei Ig domain protein zig-8-like isoform X3
zwei Ig domain protein zig-8-like isoform X2
zwei Ig domain protein zig-8-like isoform X1
zwei Ig domain protein zig-8-like isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
serine-aspartate repeat-containing protein I-like
uncharacterized LOC123772644, transcript variant X2
uncharacterized LOC123772644, transcript variant X1
uncharacterized protein LOC123772644 isoform X2
uncharacterized protein LOC123772644 isoform X1
palmitoyltransferase ZDHHC6-like, transcript variant X2
palmitoyltransferase ZDHHC6-like, transcript variant X3
palmitoyltransferase ZDHHC6-like, transcript variant X1
palmitoyltransferase ZDHHC6-like isoform X1
palmitoyltransferase ZDHHC6-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
uncharacterized LOC123772652, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123772652, transcript variant X3
uncharacterized LOC123772652, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123772652, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123772652, transcript variant X2
uncharacterized protein LOC123772652 isoform X1
uncharacterized protein LOC123772652 isoform X2
uncharacterized protein LOC123772652 isoform X3
uncharacterized protein LOC123772652 isoform X4
microtubule-associated protein futsch-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC123772653 isoform X4
microtubule-associated protein futsch-like, transcript variant X6
microtubule-associated protein futsch-like, transcript variant X4
microtubule-associated protein futsch-like, transcript variant X5
microtubule-associated protein futsch-like, transcript variant X3
microtubule-associated protein futsch-like, transcript variant X2
microtubule-associated protein futsch-like, transcript variant X8
microtubule-associated protein futsch-like, transcript variant X7
microtubule-associated protein futsch-like, transcript variant X1
uncharacterized protein LOC123772653 isoform X3
microtubule-associated protein futsch-like isoform X2
microtubule-associated protein futsch-like isoform X1
eukaryotic initiation factor 4A-I-like, transcript variant X5
eukaryotic initiation factor 4A-I-like, transcript variant X3
eukaryotic initiation factor 4A-I-like, transcript variant X2
eukaryotic initiation factor 4A-I-like, transcript variant X1
eukaryotic initiation factor 4A-I-like, transcript variant X4
eukaryotic initiation factor 4A-I-like isoform X4
eukaryotic initiation factor 4A-I-like isoform X2
eukaryotic initiation factor 4A-I-like isoform X1
eukaryotic initiation factor 4A-I-like isoform X3
uncharacterized LOC123772658, transcript variant X1
uncharacterized LOC123772658, transcript variant X4
uncharacterized LOC123772658, transcript variant X6
uncharacterized LOC123772658, transcript variant X5
uncharacterized LOC123772658, transcript variant X7
uncharacterized LOC123772658, transcript variant X3
uncharacterized protein LOC123772658 isoform X1
uncharacterized LOC123772658, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123772658, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized protein LOC123772658 isoform X2
microtubule-associated protein 1A-like, transcript variant X4
microtubule-associated protein 1A-like, transcript variant X3
microtubule-associated protein 1A-like, transcript variant X2
microtubule-associated protein 1A-like, transcript variant X5
microtubule-associated protein 1A-like, transcript variant X1
uncharacterized protein LOC123772661 isoform X4
msx2-interacting protein-like isoform X3
uncharacterized protein LOC123772661 isoform X2
microtubule-associated protein 1A-like isoform X5
uncharacterized protein LOC123772661 isoform X1
tumor protein p63-regulated gene 1-like protein, transcript variant X3
tumor protein p63-regulated gene 1-like protein, transcript variant X2
tumor protein p63-regulated gene 1-like protein, transcript variant X1
tumor protein p63-regulated gene 1-like protein isoform X3
tumor protein p63-regulated gene 1-like protein isoform X1
tumor protein p63-regulated gene 1-like protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
aspartic and glutamic acid-rich protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 39% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
putative mediator of RNA polymerase II transcription subunit 26
fibrous sheath CABYR-binding protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transmembrane protein 107-like, transcript variant X1
transmembrane protein 107-like, transcript variant X2
thioredoxin domain-containing protein 17-like
coatomer subunit beta'-like, transcript variant X2
coatomer subunit beta'-like, transcript variant X1
coatomer subunit beta'-like, transcript variant X5
coatomer subunit beta'-like, transcript variant X6
coatomer subunit beta'-like, transcript variant X3
coatomer subunit beta'-like, transcript variant X4
coatomer subunit beta'-like, transcript variant X7
serine/arginine repetitive matrix protein 5-like
probable serine/threonine-protein kinase DDB_G0267686
uncharacterized LOC123772671, transcript variant X2
uncharacterized LOC123772671, transcript variant X3
uncharacterized LOC123772671, transcript variant X1
uncharacterized LOC123772670, transcript variant X3
uncharacterized LOC123772670, transcript variant X1
uncharacterized LOC123772670, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
protein phosphatase 1 regulatory subunit 21-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: maltase-glucoamylase, intestinal-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
very low-density lipoprotein receptor-like, transcript variant X2
very low-density lipoprotein receptor-like, transcript variant X1
very low-density lipoprotein receptor-like, transcript variant X3
very low-density lipoprotein receptor-like, transcript variant X4
low-density lipoprotein receptor-like isoform X2
very low-density lipoprotein receptor-like isoform X1
low-density lipoprotein receptor-like isoform X3
very low-density lipoprotein receptor-like isoform X4
uncharacterized LOC123772680, transcript variant X1
uncharacterized LOC123772680, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X11
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X7
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X2
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X4
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X9
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X3
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X12
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X10
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X8
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X5
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X6
uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X1
uncharacterized LOC123772681, transcript variant X2
uncharacterized LOC123772681, transcript variant X3
uncharacterized LOC123772681, transcript variant X1
uncharacterized LOC123772681, transcript variant X4
uncharacterized protein LOC123772681 isoform X1
uncharacterized LOC123772681, transcript variant X5
uncharacterized protein LOC123772681 isoform X2
paternally-expressed gene 3 protein-like
Hermansky-Pudlak syndrome 3 protein-like, transcript variant X1
Hermansky-Pudlak syndrome 3 protein-like, transcript variant X2
Hermansky-Pudlak syndrome 3 protein-like, transcript variant X4
Hermansky-Pudlak syndrome 3 protein-like, transcript variant X3
Hermansky-Pudlak syndrome 3 protein-like, transcript variant X5
Hermansky-Pudlak syndrome 3 protein-like isoform X1
Hermansky-Pudlak syndrome 3 protein-like isoform X2
Hermansky-Pudlak syndrome 3 protein homolog isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
glucose dehydrogenase [FAD, quinone]-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
T-complex protein 11-like protein 1, transcript variant X3
T-complex protein 11-like protein 1, transcript variant X1
T-complex protein 11-like protein 1, transcript variant X6
T-complex protein 11-like protein 1, transcript variant X5
T-complex protein 11-like protein 1, transcript variant X7
T-complex protein 11-like protein 1, transcript variant X2
T-complex protein 11-like protein 1, transcript variant X4
T-complex protein 11-like protein 1 isoform X4
T-complex protein 11-like protein 1 isoform X3
T-complex protein 11-like protein 1 isoform X2
T-complex protein 11-like protein 1 isoform X1
b(0,+)-type amino acid transporter 1-like, transcript variant X13
b(0,+)-type amino acid transporter 1-like, transcript variant X9
b(0,+)-type amino acid transporter 1-like, transcript variant X11
b(0,+)-type amino acid transporter 1-like, transcript variant X10
b(0,+)-type amino acid transporter 1-like, transcript variant X6
b(0,+)-type amino acid transporter 1-like, transcript variant X2
b(0,+)-type amino acid transporter 1-like, transcript variant X4
b(0,+)-type amino acid transporter 1-like, transcript variant X5
b(0,+)-type amino acid transporter 1-like, transcript variant X1
b(0,+)-type amino acid transporter 1-like, transcript variant X3
b(0,+)-type amino acid transporter 1-like, transcript variant X7
b(0,+)-type amino acid transporter 1-like, transcript variant X8
b(0,+)-type amino acid transporter 1-like isoform X12
b(0,+)-type amino acid transporter 1-like isoform X8
b(0,+)-type amino acid transporter 1-like isoform X10
b(0,+)-type amino acid transporter 1-like isoform X9
b(0,+)-type amino acid transporter 1-like isoform X5
b(0,+)-type amino acid transporter 1-like isoform X2
b(0,+)-type amino acid transporter 1-like isoform X3
b(0,+)-type amino acid transporter 1-like isoform X4
b(0,+)-type amino acid transporter 1-like isoform X1
b(0,+)-type amino acid transporter 1-like isoform X6
b(0,+)-type amino acid transporter 1-like isoform X7
b(0,+)-type amino acid transporter 1-like, transcript variant X12
b(0,+)-type amino acid transporter 1-like isoform X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ras-related C3 botulinum toxin substrate 1-like, transcript variant X2
ras-related C3 botulinum toxin substrate 1-like, transcript variant X1
ras-related C3 botulinum toxin substrate 1-like
uncharacterized LOC123772695, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123772695, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized LOC123772695, transcript variant X5
uncharacterized LOC123772695, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
uncharacterized LOC123772695, transcript variant X2
uncharacterized protein LOC123772695 isoform X1
uncharacterized LOC123772695, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
uncharacterized protein LOC123772695 isoform X2
uncharacterized LOC123772698, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123772698, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123772699, transcript variant X2
uncharacterized LOC123772699, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
apoptosis-inducing factor 3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
apoptosis-inducing factor 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
apoptosis-inducing factor 3-like isoform X1
apoptosis-inducing factor 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
apoptosis-inducing factor 3-like isoform X2
apoptosis-inducing factor 3-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
apoptosis-inducing factor 3-like isoform X3
proline-rich 33 kDa extensin-related protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
myc box-dependent-interacting protein 1-like, transcript variant X5
myc box-dependent-interacting protein 1-like, transcript variant X4
myc box-dependent-interacting protein 1-like, transcript variant X1
myc box-dependent-interacting protein 1-like, transcript variant X6
myc box-dependent-interacting protein 1-like, transcript variant X7
myc box-dependent-interacting protein 1-like, transcript variant X2
myc box-dependent-interacting protein 1-like, transcript variant X3
myc box-dependent-interacting protein 1-like isoform X5
alpha-1,3/1,6-mannosyltransferase ALG2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123772711, transcript variant X4
uncharacterized LOC123772711, transcript variant X2
uncharacterized LOC123772711, transcript variant X1
uncharacterized LOC123772711, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 54% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
golgin subfamily A member 6-like protein 22
protein unc-80 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein unc-80 homolog, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
protein unc-80 homolog, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein unc-80 homolog, transcript variant X3
protein unc-80 homolog, transcript variant X7
protein unc-80 homolog, transcript variant X10
protein unc-80 homolog, transcript variant X8
protein unc-80 homolog, transcript variant X4
protein unc-80 homolog, transcript variant X5
protein unc-80 homolog, transcript variant X11
protein unc-80 homolog, transcript variant X2
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like
ATPase family AAA domain-containing protein 5-like, transcript variant X1
ATPase family AAA domain-containing protein 5-like, transcript variant X3
ATPase family AAA domain-containing protein 5-like, transcript variant X2
ATPase family AAA domain-containing protein 5-like
iron-sulfur cluster assembly 2 homolog, mitochondrial-like, transcript variant X1
iron-sulfur cluster assembly 2 homolog, mitochondrial-like, transcript variant X2
iron-sulfur cluster assembly 2 homolog, mitochondrial-like isoform X1
iron-sulfur cluster assembly 2 homolog, mitochondrial-like isoform X2
calcium-independent protein kinase C-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
calcium-independent protein kinase C-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
calcium-independent protein kinase C-like, transcript variant X1
calcium-independent protein kinase C-like isoform X1
calcium-independent protein kinase C-like isoform X2
calcium-independent protein kinase C-like isoform X3
thyroid receptor-interacting protein 11-like, transcript variant X1
thyroid receptor-interacting protein 11-like, transcript variant X2
thyroid receptor-interacting protein 11-like isoform X1
thyroid receptor-interacting protein 11-like isoform X2
synaptic vesicle membrane protein VAT-1 homolog-like
secretory carrier-associated membrane protein 1-like, transcript variant X2
secretory carrier-associated membrane protein 1-like, transcript variant X1
secretory carrier-associated membrane protein 1-like, transcript variant X3
secretory carrier-associated membrane protein 1-like, transcript variant X5
secretory carrier-associated membrane protein 1-like, transcript variant X4
secretory carrier-associated membrane protein 1-like isoform X1
secretory carrier-associated membrane protein 1-like isoform X2
secretory carrier-associated membrane protein 1-like isoform X4
secretory carrier-associated membrane protein 1-like isoform X3
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X2
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X3
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X1
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X4
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X5
FYVE and coiled-coil domain-containing protein 1-like isoform X2
FYVE and coiled-coil domain-containing protein 1-like isoform X3
FYVE and coiled-coil domain-containing protein 1-like isoform X1
FYVE and coiled-coil domain-containing protein 1-like isoform X4
FYVE and coiled-coil domain-containing protein 1-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
FYVE and coiled-coil domain-containing protein 1-like isoform X5