Procambarus clarkii strain Jiangsu linkage group LG69, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035541.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 3 subunit A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
uncharacterized transmembrane protein DDB_G0289901-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
uncharacterized LOC123772370, transcript variant X2
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC123772370, transcript variant X3
uncharacterized LOC123772370, transcript variant X5
uncharacterized LOC123772370, transcript variant X1
uncharacterized LOC123772370, transcript variant X4
uncharacterized protein LOC123772370 isoform X1
uncharacterized protein LOC123772370 isoform X2
uncharacterized protein LOC123772370 isoform X3
uncharacterized protein LOC123772370 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
solute carrier family 13 member 5-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
solute carrier family 13 member 5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
solute carrier family 13 member 5-like isoform X3
protein I'm not dead yet-like isoform X1
solute carrier family 13 member 5-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
solute carrier family 13 member 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
solute carrier family 13 member 5-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
solute carrier family 13 member 5-like isoform X4
protein I'm not dead yet-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and SAM domain-containing protein 6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
ankyrin repeat and SAM domain-containing protein 6-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
ankyrin repeat and SAM domain-containing protein 6-like isoform X2
ankyrin repeat and SAM domain-containing protein 6-like isoform X1
serine/arginine repetitive matrix protein 1-like, transcript variant X1
serine/arginine repetitive matrix protein 1-like, transcript variant X4
serine/arginine repetitive matrix protein 1-like, transcript variant X3
serine/arginine repetitive matrix protein 1-like, transcript variant X2
uncharacterized protein LOC123772375 isoform X1
serine/arginine repetitive matrix protein 1-like isoform X2
succinate--hydroxymethylglutarate CoA-transferase-like, transcript variant X1
succinate--hydroxymethylglutarate CoA-transferase-like, transcript variant X2
succinate--hydroxymethylglutarate CoA-transferase-like isoform X1
succinate--hydroxymethylglutarate CoA-transferase-like isoform X2
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- like
DBF4-type zinc finger-containing protein 2 homolog
transmembrane protein 151B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 151B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transmembrane protein 151B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized LOC123772381, transcript variant X6
uncharacterized LOC123772381, transcript variant X4
uncharacterized LOC123772381, transcript variant X1
uncharacterized LOC123772381, transcript variant X5
uncharacterized LOC123772381, transcript variant X2
uncharacterized LOC123772381, transcript variant X3
uncharacterized protein LOC123772381 isoform X1
uncharacterized protein LOC123772381 isoform X5
uncharacterized protein LOC123772381 isoform X6
uncharacterized protein LOC123772381 isoform X2
uncharacterized protein LOC123772381 isoform X3
uncharacterized protein LOC123772381 isoform X4
glutamate receptor ionotropic, kainate glr-3-like, transcript variant X1
glutamate receptor ionotropic, kainate glr-3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
glutamate receptor ionotropic, kainate glr-3-like, transcript variant X3
uncharacterized protein LOC123772384 isoform X2
uncharacterized protein LOC123772384 isoform X3
glutamate receptor ionotropic, kainate glr-3-like isoform X1
delta-aminolevulinic acid dehydratase-like, transcript variant X3
delta-aminolevulinic acid dehydratase-like, transcript variant X1
delta-aminolevulinic acid dehydratase-like, transcript variant X2
delta-aminolevulinic acid dehydratase-like
uncharacterized LOC123772388, transcript variant X2
uncharacterized LOC123772388, transcript variant X3
uncharacterized LOC123772388, transcript variant X1
uncharacterized RING finger protein P32A8.03c-like, transcript variant X1
uncharacterized RING finger protein P32A8.03c-like, transcript variant X2
uncharacterized RING finger protein P32A8.03c-like isoform X1
uncharacterized protein LOC123772389 isoform X2
pollen-specific leucine-rich repeat extensin-like protein 1
hemicentin-1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
hemicentin-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123772392, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123772392, transcript variant X1
uncharacterized protein LOC123772392 isoform X2
uncharacterized protein LOC123772392 isoform X1
peroxisomal sarcosine oxidase-like, transcript variant X2
similar to RNA sequence (same species):INSD:GBEV01004790.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 76 bases not found in genome assembly
peroxisomal sarcosine oxidase-like, transcript variant X1
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 76 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
peroxisomal sarcosine oxidase-like isoform X1
peroxisomal sarcosine oxidase-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
protein farnesyltransferase subunit beta-like
laminin subunit beta-1-like, transcript variant X1
laminin subunit beta-1-like, transcript variant X2
laminin subunit beta-1-like, transcript variant X3
laminin subunit beta-1-like, transcript variant X4
laminin subunit beta-1-like, transcript variant X5
laminin subunit beta-1-like, transcript variant X7
laminin subunit beta-1-like, transcript variant X6
translocon-associated protein subunit beta-like
nuclear inhibitor of protein phosphatase 1-like, transcript variant X2
nuclear inhibitor of protein phosphatase 1-like, transcript variant X1
nuclear inhibitor of protein phosphatase 1-like isoform X2
nuclear inhibitor of protein phosphatase 1-like isoform X1
protein kinase C, brain isozyme-like, transcript variant X3
protein kinase C, brain isozyme-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
protein kinase C, brain isozyme-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
protein kinase C, brain isozyme-like isoform X3
protein kinase C, brain isozyme-like isoform X1
protein kinase C, brain isozyme-like isoform X2
uncharacterized LOC123772403, transcript variant X3
uncharacterized LOC123772403, transcript variant X2
uncharacterized LOC123772403, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pentatricopeptide repeat-containing protein At1g10270-like
putative cell agglutination protein SPAPB2C8.01
uncharacterized LOC123772404, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized LOC123772404, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
uncharacterized LOC123772404, transcript variant X3
uncharacterized protein LOC123772404 isoform X2
uncharacterized protein LOC123772404 isoform X1
uncharacterized protein LOC123772404 isoform X3
uncharacterized LOC123772404, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
uncharacterized LOC123772404, transcript variant X6
uncharacterized LOC123772404, transcript variant X5
tubulin alpha-1 chain-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 344 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
tubulin alpha-1 chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein dpy-30 homolog, transcript variant X5
protein dpy-30 homolog, transcript variant X1
protein dpy-30 homolog, transcript variant X2
protein dpy-30 homolog, transcript variant X4
protein dpy-30 homolog, transcript variant X6
protein dpy-30 homolog, transcript variant X3
protein dpy-30 homolog, transcript variant X7
methylmalonyl-CoA mutase, mitochondrial-like
coiled-coil domain-containing protein 63-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
tubulin alpha-1 chain-like, transcript variant X3
tubulin alpha-1 chain-like, transcript variant X4
sorting and assembly machinery component 50 homolog A-like, transcript variant X1
sorting and assembly machinery component 50 homolog A-like, transcript variant X3
sorting and assembly machinery component 50 homolog A-like, transcript variant X5
sorting and assembly machinery component 50 homolog A-like isoform X1
sorting and assembly machinery component 50 homolog A-like isoform X3
sorting and assembly machinery component 50 homolog A-like, transcript variant X2
sorting and assembly machinery component 50 homolog A-like, transcript variant X4
sorting and assembly machinery component 50 homolog A-like isoform X2
sorting and assembly machinery component 50 homolog A-like isoform X4
glycine-rich cell wall structural protein 1.8-like, transcript variant X2
glycine-rich cell wall structural protein 1.8-like, transcript variant X3
glycine-rich cell wall structural protein 1.8-like, transcript variant X1
glycine-rich cell wall structural protein 1.8-like, transcript variant X4
glycine-rich cell wall structural protein 1.8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
keratin, type I cytoskeletal 9-like, transcript variant X2
keratin, type I cytoskeletal 9-like, transcript variant X1
U3 small nucleolar RNA-associated protein 25-like
COORDINATES: nucleotide motif:Rfam:12.0:RF00563
mitochondrial inner membrane protein OXA1L-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
basic salivary proline-rich protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
repetitive proline-rich cell wall protein 2-like
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007
zinc finger protein 184-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
zinc finger protein 184-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123772424, transcript variant X1
uncharacterized LOC123772424, transcript variant X2
PRELI domain-containing protein 1, mitochondrial-like
sorting nexin-13-like, transcript variant X1
sorting nexin-13-like, transcript variant X2
neurocalcin homolog, transcript variant X1
neurocalcin homolog, transcript variant X2
uncharacterized LOC123772428, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123772428, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
uncharacterized protein LOC123772428 isoform X2
uncharacterized protein LOC123772428 isoform X1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
histone PARylation factor 1-like, transcript variant X2
histone PARylation factor 1-like isoform X2
histone PARylation factor 1-like, transcript variant X1
histone PARylation factor 1-like isoform X1
histone PARylation factor 1-like, transcript variant X3
histone PARylation factor 1-like isoform X3
uncharacterized LOC123772430, transcript variant X2
uncharacterized LOC123772430, transcript variant X1
heparan sulfate 2-O-sulfotransferase pipe-like, transcript variant X1
heparan sulfate 2-O-sulfotransferase pipe-like isoform X1
heparan sulfate 2-O-sulfotransferase pipe-like, transcript variant X2
heparan sulfate 2-O-sulfotransferase pipe-like isoform X2
vacuolar protein sorting-associated protein 8 homolog, transcript variant X2
vacuolar protein sorting-associated protein 8 homolog, transcript variant X1
vacuolar protein sorting-associated protein 8 homolog isoform X2
vacuolar protein sorting-associated protein 8 homolog isoform X1
polynucleotide 5'-hydroxyl-kinase NOL9-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
polynucleotide 5'-hydroxyl-kinase NOL9-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
polynucleotide 5'-hydroxyl-kinase NOL9-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
polynucleotide 5'-hydroxyl-kinase NOL9-like isoform X1
polynucleotide 5'-hydroxyl-kinase NOL9-like isoform X2
protein YIPF1-like, transcript variant X3
protein YIPF1-like, transcript variant X1
protein YIPF1-like, transcript variant X2
probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1
probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X2
broad-complex core protein-like, transcript variant X2
broad-complex core protein-like, transcript variant X3
broad-complex core protein-like, transcript variant X4
broad-complex core protein-like, transcript variant X1
broad-complex core protein-like, transcript variant X6
broad-complex core protein-like, transcript variant X7
broad-complex core protein-like, transcript variant X8
broad-complex core protein-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
broad-complex core protein-like, transcript variant X9
broad-complex core protein-like, transcript variant X10
broad-complex core protein-like, transcript variant X5
broad-complex core protein-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcription factor GAGA-like isoform X1
transcription factor GAGA-like isoform X3
transcription factor GAGA-like isoform X2
broad-complex core protein-like isoform X10
broad-complex core protein-like isoform X11
broad-complex core protein isoforms 1/2/3/4/5-like isoform X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vacuolar protein sorting-associated protein 4-like
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X6
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X1
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X10
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X13
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X8
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X11
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X14
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X7
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X9
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X12
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X15
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X4
nuclear pore complex protein DDB_G0274915-like
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X5
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X3
UDP-N-acetylhexosamine pyrophosphorylase-like, transcript variant X2
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X1
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X5
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X8
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X3
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X6
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X9
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X2
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X4
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X7
UDP-N-acetylhexosamine pyrophosphorylase-like isoform X10
ornithine aminotransferase, mitochondrial-like, transcript variant X2
ornithine aminotransferase, mitochondrial-like, transcript variant X3
ornithine aminotransferase, mitochondrial-like, transcript variant X4
ornithine aminotransferase, mitochondrial-like, transcript variant X1
ornithine aminotransferase, mitochondrial-like
iduronate 2-sulfatase-like, transcript variant X1
iduronate 2-sulfatase-like, transcript variant X2
iduronate 2-sulfatase-like, transcript variant X4
iduronate 2-sulfatase-like, transcript variant X3
THAP domain-containing protein 1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
THAP domain-containing protein 1-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
THAP domain-containing protein 1-like, transcript variant X6
THAP domain-containing protein 1-like, transcript variant X5
THAP domain-containing protein 1-like isoform X3
THAP domain-containing protein 1-like isoform X4
THAP domain-containing protein 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
THAP domain-containing protein 1-like isoform X2
THAP domain-containing protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
THAP domain-containing protein 1-like, transcript variant X1
THAP domain-containing protein 1-like isoform X1
facilitated trehalose transporter Tret1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
facilitated trehalose transporter Tret1-2 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
facilitated trehalose transporter Tret1-2 homolog, transcript variant X2
facilitated trehalose transporter Tret1-2 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
NFX1-type zinc finger-containing protein 1-like, transcript variant X4
NFX1-type zinc finger-containing protein 1-like, transcript variant X5
NFX1-type zinc finger-containing protein 1-like, transcript variant X7
NFX1-type zinc finger-containing protein 1-like, transcript variant X1
NFX1-type zinc finger-containing protein 1-like, transcript variant X6
NFX1-type zinc finger-containing protein 1-like, transcript variant X2
NFX1-type zinc finger-containing protein 1-like, transcript variant X3
NFX1-type zinc finger-containing protein 1-like isoform X1
NFX1-type zinc finger-containing protein 1-like isoform X2
NFX1-type zinc finger-containing protein 1-like isoform X3
potassium channel subfamily K member 9-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
potassium channel subfamily K member 18-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 8-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 8-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 8-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 8-like
DNA (cytosine-5)-methyltransferase PliMCI-like, transcript variant X2
DNA (cytosine-5)-methyltransferase PliMCI-like, transcript variant X1
DNA (cytosine-5)-methyltransferase PliMCI-like isoform X2
DNA (cytosine-5)-methyltransferase PliMCI-like isoform X1
mitochondrial import inner membrane translocase subunit Tim10-like
activator of basal transcription 1-like, transcript variant X2
activator of basal transcription 1-like, transcript variant X1
activator of basal transcription 1-like isoform X2
activator of basal transcription 1-like isoform X1
neither inactivation nor afterpotential protein C-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
neither inactivation nor afterpotential protein C-like, transcript variant X2
neither inactivation nor afterpotential protein C-like isoform X1
neither inactivation nor afterpotential protein C-like isoform X2
similar to RNA sequence (same species):INSD:GBEV01032281.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 225 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 225 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123772465, transcript variant X1
uncharacterized LOC123772465, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123772465, transcript variant X2
uncharacterized protein LOC123772465 isoform X1
uncharacterized protein LOC123772465 isoform X2
uncharacterized protein LOC123772465 isoform X3
glutamate--cysteine ligase catalytic subunit-like, transcript variant X1
glutamate--cysteine ligase catalytic subunit-like, transcript variant X2
glutamate--cysteine ligase catalytic subunit-like, transcript variant X3
glutamate--cysteine ligase catalytic subunit-like isoform X1
glutamate--cysteine ligase catalytic subunit-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123772468, transcript variant X1
uncharacterized LOC123772468, transcript variant X2
uncharacterized LOC123772468, transcript variant X3
uncharacterized LOC123772468, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
ATP-dependent translocase ABCB1-like, transcript variant X2
ATP-dependent translocase ABCB1-like, transcript variant X4
ATP-dependent translocase ABCB1-like, transcript variant X3
ATP-dependent translocase ABCB1-like, transcript variant X1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like
baculoviral IAP repeat-containing protein 5-like
uncharacterized protein LOC123772479 isoform X2
sporozoite surface protein 2-like, transcript variant X2
sporozoite surface protein 2-like, transcript variant X1
sporozoite surface protein 2-like isoform X2
sporozoite surface protein 2-like isoform X1
glutamate [NMDA] receptor subunit 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
protein Star-like, transcript variant X1
protein Star-like, transcript variant X2
uncharacterized LOC123772483, transcript variant X1
uncharacterized LOC123772483, transcript variant X6
uncharacterized LOC123772483, transcript variant X2
uncharacterized LOC123772483, transcript variant X3
uncharacterized protein LOC123772483 isoform X1
uncharacterized protein LOC123772483 isoform X6
uncharacterized protein LOC123772483 isoform X2
uncharacterized protein LOC123772483 isoform X3
uncharacterized LOC123772483, transcript variant X5
uncharacterized protein LOC123772483 isoform X5
uncharacterized LOC123772483, transcript variant X4
uncharacterized protein LOC123772483 isoform X4
mediator of DNA damage checkpoint protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vesicle-associated membrane protein 2-like, transcript variant X2
vesicle-associated membrane protein 2-like, transcript variant X1
vesicle-associated membrane protein 2-like, transcript variant X3
vesicle-associated membrane protein 2-like isoform X2
vesicle-associated membrane protein 2-like isoform X1
vesicle-associated membrane protein 2-like isoform X3
chitinase domain-containing protein 1-like
RWD domain-containing protein 2A-like, transcript variant X1
RWD domain-containing protein 2A-like, transcript variant X2
RWD domain-containing protein 2A-like, transcript variant X3
RWD domain-containing protein 2A-like, transcript variant X4
RWD domain-containing protein 2A-like isoform X1
RWD domain-containing protein 2A-like isoform X2
uncharacterized LOC123772490, transcript variant X1
uncharacterized LOC123772490, transcript variant X2
uncharacterized protein LOC123772490 isoform X1
uncharacterized protein LOC123772490 isoform X2
intraflagellar transport protein 172 homolog, transcript variant X1
intraflagellar transport protein 172 homolog, transcript variant X2
intraflagellar transport protein 172 homolog isoform X1
intraflagellar transport protein 172 homolog isoform X2
uncharacterized LOC123772491, transcript variant X1
uncharacterized LOC123772491, transcript variant X3
uncharacterized LOC123772491, transcript variant X2
uncharacterized LOC123772491, transcript variant X4
uncharacterized protein LOC123772491 isoform X1
uncharacterized protein LOC123772491 isoform X3
uncharacterized protein LOC123772491 isoform X2
uncharacterized protein LOC123772491 isoform X4
CLIP domain-containing serine protease 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
putative uncharacterized protein FLJ46204
techylectin-5A-like, transcript variant X1
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
techylectin-5A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 34% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
regulator of nonsense transcripts 1-like
elongation of very long chain fatty acids protein 6-like, transcript variant X1
elongation of very long chain fatty acids protein 6-like, transcript variant X2
elongation of very long chain fatty acids protein 6-like isoform X1
elongation of very long chain fatty acids protein 6-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
vicilin-like seed storage protein At2g18540
peptide methionine sulfoxide reductase-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: peptide methionine sulfoxide reductase-like
trithorax group protein osa-like, transcript variant X5
trithorax group protein osa-like, transcript variant X3
trithorax group protein osa-like, transcript variant X1
trithorax group protein osa-like, transcript variant X2
trithorax group protein osa-like, transcript variant X4
trithorax group protein osa-like isoform X2
trithorax group protein osa-like isoform X1
trithorax group protein osa-like isoform X3
trithorax group protein osa-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
trithorax group protein osa-like isoform X4
venom phosphodiesterase-like, transcript variant X1
venom phosphodiesterase-like, transcript variant X2
venom phosphodiesterase-like, transcript variant X4
venom phosphodiesterase-like, transcript variant X3
probable GPI-anchored adhesin-like protein PGA55
receptor-type tyrosine-protein phosphatase epsilon-like
uncharacterized LOC123772507, transcript variant X1
uncharacterized LOC123772507, transcript variant X3
uncharacterized LOC123772507, transcript variant X2
uncharacterized protein LOC123772507 isoform X1
uncharacterized protein LOC123772507 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
galactoside alpha-(1,2)-fucosyltransferase 2-like
zinc finger protein 271-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
zinc finger protein 271-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
ufm1-specific protease 1-like, transcript variant X2
ufm1-specific protease 1-like, transcript variant X1
decapping and exoribonuclease protein-like, transcript variant X4
decapping and exoribonuclease protein-like, transcript variant X1
decapping and exoribonuclease protein-like, transcript variant X2
decapping and exoribonuclease protein-like, transcript variant X3
decapping and exoribonuclease protein-like isoform X3
decapping and exoribonuclease protein-like isoform X1
decapping and exoribonuclease protein-like isoform X2
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cleavage and polyadenylation specificity factor subunit 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
ring-infected erythrocyte surface antigen-like
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
uncharacterized PPE family protein PPE24-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
golgin subfamily A member 6-like protein 22
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns