Procambarus clarkii strain Jiangsu linkage group LG58, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035530.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
nudC domain-containing protein 3-like, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
nudC domain-containing protein 3-like, transcript variant X2
nudC domain-containing protein 3-like isoform X1
nudC domain-containing protein 3-like isoform X2
transcription initiation factor TFIID subunit 4-like, transcript variant X2
similar to RNA sequence (same species):INSD:GARH01044358.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1234 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcription initiation factor TFIID subunit 4-like, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1234 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 114 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription initiation factor TFIID subunit 4-like isoform X1
transcription initiation factor TFIID subunit 4-like isoform X2
similar to RNA sequence (same species):INSD:GBEV01070061.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 85 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 85 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
putative fatty acyl-CoA reductase CG5065, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
putative fatty acyl-CoA reductase CG5065, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
putative fatty acyl-CoA reductase CG5065, transcript variant X1
putative fatty acyl-CoA reductase CG5065, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
putative fatty acyl-CoA reductase CG5065
putative fatty acyl-CoA reductase CG5065, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
putative fatty acyl-CoA reductase CG5065 isoform X1
putative fatty acyl-CoA reductase CG5065 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
28S ribosomal protein S18a, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
semaphorin-5A-like, transcript variant X2
semaphorin-5A-like, transcript variant X3
semaphorin-5A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
EF-hand calcium-binding domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
pancreatic lipase-related protein 2-like
similar to RNA sequence (same species):INSD:GBEV01033354.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1253 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 1232 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123769443, transcript variant X1
uncharacterized LOC123769443, transcript variant X2
uncharacterized protein LOC123769443 isoform X1
uncharacterized protein LOC123769443 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
cysteine--tRNA ligase, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
cysteine--tRNA ligase, mitochondrial-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
cysteine--tRNA ligase, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
cysteine--tRNA ligase, mitochondrial-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
cysteine--tRNA ligase, mitochondrial-like
cilia- and flagella-associated protein 97-like
similar to RNA sequence (same species):INSD:GBEV01000051.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 29 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 29 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
GATA zinc finger domain-containing protein 14-like
guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas-like
uncharacterized LOC123769447, transcript variant X3
uncharacterized protein LOC123769447 isoform X3
uncharacterized LOC123769447, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized LOC123769447, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
uncharacterized LOC123769447, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
uncharacterized protein LOC123769447 isoform X2
uncharacterized protein LOC123769447 isoform X4
uncharacterized protein LOC123769447 isoform X1
putative uncharacterized protein FLJ46204
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
ubiquitin-like modifier-activating enzyme 5
uncharacterized LOC123769451, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123769451, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
ADP-ribosylation factor-like protein 8B-A
complement component 1 Q subcomponent-binding protein, mitochondrial-like
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123769456, transcript variant X1
uncharacterized LOC123769456, transcript variant X3
uncharacterized LOC123769456, transcript variant X2
uncharacterized protein LOC123769456 isoform X1
uncharacterized protein LOC123769456 isoform X3
uncharacterized protein LOC123769456 isoform X2
sepiapterin reductase-like, transcript variant X1
sepiapterin reductase-like, transcript variant X2
coiled-coil and C2 domain-containing protein 1-like
N-acetylgalactosaminyltransferase 6-like, transcript variant X1
N-acetylgalactosaminyltransferase 6-like isoform X1
N-acetylgalactosaminyltransferase 6-like, transcript variant X2
N-acetylgalactosaminyltransferase 6-like, transcript variant X3
N-acetylgalactosaminyltransferase 6-like isoform X2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
RNA-binding protein Musashi homolog Rbp6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
postacrosomal sheath WW domain-binding protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
poly(A) RNA polymerase gld-2 homolog B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
oxysterol-binding protein 1-like, transcript variant X4
oxysterol-binding protein 1-like, transcript variant X3
oxysterol-binding protein 1-like, transcript variant X2
oxysterol-binding protein 1-like, transcript variant X1
oxysterol-binding protein 1-like isoform X4
oxysterol-binding protein 1-like isoform X3
oxysterol-binding protein 1-like isoform X2
oxysterol-binding protein 1-like isoform X1
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ATP-dependent RNA helicase A-like, transcript variant X1
ATP-dependent RNA helicase A protein-like isoform X1
ATP-dependent RNA helicase A-like, transcript variant X2
ATP-dependent RNA helicase A-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X10
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X4
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X2
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X9
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X6
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X5
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X1
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X3
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X8
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X7
uncharacterized protein LOC123769472 isoform X1
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X11
actin cytoskeleton-regulatory complex protein PAN1-like, transcript variant X12
actin cytoskeleton-regulatory complex protein PAN1-like isoform X3
actin cytoskeleton-regulatory complex protein PAN1-like isoform X2
Bardet-Biedl syndrome 1 protein-like, transcript variant X1
Bardet-Biedl syndrome 1 protein-like, transcript variant X2
Bardet-Biedl syndrome 1 protein-like isoform X1
Bardet-Biedl syndrome 1 protein-like isoform X2
extracellular serine/threonine protein kinase four-jointed-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: extracellular serine/threonine protein kinase four-jointed-like
uncharacterized PPE family protein PPE24-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
5'-3' exonuclease PLD3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
5'-3' exonuclease PLD3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
cytochrome c oxidase subunit 6A, mitochondrial-like
tetraspanin-2A-like, transcript variant X3
tetraspanin-2A-like, transcript variant X1
tetraspanin-2A-like, transcript variant X4
tetraspanin-2A-like, transcript variant X2
tetraspanin-2A-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
RNA-binding protein 25-like, transcript variant X9
RNA-binding protein 25-like, transcript variant X7
RNA-binding protein 25-like, transcript variant X4
RNA-binding protein 25-like, transcript variant X8
RNA-binding protein 25-like, transcript variant X5
RNA-binding protein 25-like, transcript variant X11
RNA-binding protein 25-like, transcript variant X3
RNA-binding protein 25-like, transcript variant X2
RNA-binding protein 25-like, transcript variant X6
RNA-binding protein 25-like, transcript variant X1
RNA-binding protein 25-like, transcript variant X10
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like, transcript variant X1
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like, transcript variant X3
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like, transcript variant X2
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like isoform X1
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like isoform X2
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like isoform X3
cytochrome c oxidase subunit 7A1, mitochondrial-like
trans-Golgi network integral membrane protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
GDP-fucose protein O-fucosyltransferase 1-like, transcript variant X2
GDP-fucose protein O-fucosyltransferase 1-like, transcript variant X1
GDP-fucose protein O-fucosyltransferase 1-like
zinc finger protein 271-like, transcript variant X1
zinc finger protein 271-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
zinc finger protein 271-like, transcript variant X2
probable inactive protein kinase DDB_G0270444 isoform X2
uncharacterized protein LOC123769491 isoform X3
trichohyalin-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
trichohyalin-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
mediator of RNA polymerase II transcription subunit 20-like, transcript variant X3
mediator of RNA polymerase II transcription subunit 20-like isoform X3
mediator of RNA polymerase II transcription subunit 20-like, transcript variant X1
mediator of RNA polymerase II transcription subunit 20-like, transcript variant X2
facilitated trehalose transporter Tret1-like
repetitive proline-rich cell wall protein 1-like
digestive cysteine proteinase 2-like, transcript variant X1
digestive cysteine proteinase 2-like, transcript variant X2
digestive cysteine proteinase 2-like isoform X1
digestive cysteine proteinase 2-like, transcript variant X3
digestive cysteine proteinase 2-like isoform X2
digestive cysteine proteinase 1-like, transcript variant X2
digestive cysteine proteinase 1-like, transcript variant X1
digestive cysteine proteinase 1-like isoform X1
digestive cysteine proteinase 1-like isoform X2
TM2 domain-containing protein almondex-like
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X9
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X8
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X7
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X6
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X4
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X2
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X3
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X1
cyclic AMP-dependent transcription factor ATF-1-like, transcript variant X5
cyclic AMP-responsive element-binding protein-like isoform X9
cyclic AMP-dependent transcription factor ATF-1-like isoform X4
cyclic AMP-responsive element-binding protein-like isoform X8
cyclic AMP-responsive element-binding protein 1-like isoform X2
cyclic AMP-responsive element-binding protein-like isoform X7
cyclic AMP-dependent transcription factor ATF-1-like isoform X3
cyclic AMP-responsive element-binding protein-like isoform X6
cyclic AMP-dependent transcription factor ATF-1-like isoform X1
cyclic AMP-dependent transcription factor ATF-1-like isoform X5
uncharacterized LOC123769508, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC123769508, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123769508, transcript variant X2
uncharacterized LOC123769508, transcript variant X3
uncharacterized LOC123769508, transcript variant X5
glycine-rich cell wall structural protein 1.8-like
uncharacterized protein DDB_G0271670-like
AT-rich interactive domain-containing protein 1B-like, transcript variant X1
AT-rich interactive domain-containing protein 1B-like isoform X1
AT-rich interactive domain-containing protein 1B-like, transcript variant X2
AT-rich interactive domain-containing protein 1B-like, transcript variant X3
AT-rich interactive domain-containing protein 1B-like isoform X2
uncharacterized LOC123769512, transcript variant X1
uncharacterized LOC123769512, transcript variant X2
uncharacterized LOC123769512, transcript variant X3
protein inscuteable homolog, transcript variant X4
protein inscuteable homolog, transcript variant X3
protein inscuteable homolog, transcript variant X5
protein inscuteable homolog, transcript variant X2
protein inscuteable homolog, transcript variant X1
protein inscuteable homolog, transcript variant X6
pollen-specific leucine-rich repeat extensin-like protein 1
anther-specific proline-rich protein APG-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
ER membrane protein complex subunit 3-like
tyrosine-protein kinase transmembrane receptor Ror2-like
similar to RNA sequence (same species):INSD:GBEV01021697.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 276 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 276 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
peptide deformylase, mitochondrial-like, transcript variant X3
peptide deformylase, mitochondrial-like, transcript variant X2
peptide deformylase, mitochondrial-like, transcript variant X4
peptide deformylase, mitochondrial-like, transcript variant X1
peptide deformylase, mitochondrial-like isoform X1
peptide deformylase, mitochondrial-like isoform X2
TWiK family of potassium channels protein 18-like
set1/Ash2 histone methyltransferase complex subunit ASH2-like, transcript variant X3
set1/Ash2 histone methyltransferase complex subunit ASH2-like, transcript variant X1
set1/Ash2 histone methyltransferase complex subunit ASH2-like, transcript variant X2
set1/Ash2 histone methyltransferase complex subunit ASH2-like isoform X2
set1/Ash2 histone methyltransferase complex subunit ASH2-like isoform X1
calcium-activated potassium channel slowpoke-like, transcript variant X8
calcium-activated potassium channel slowpoke-like, transcript variant X4
calcium-activated potassium channel slowpoke-like, transcript variant X7
calcium-activated potassium channel slowpoke-like, transcript variant X2
calcium-activated potassium channel slowpoke-like, transcript variant X5
calcium-activated potassium channel slowpoke-like, transcript variant X29
calcium-activated potassium channel slowpoke-like, transcript variant X6
calcium-activated potassium channel slowpoke-like, transcript variant X3
calcium-activated potassium channel slowpoke-like, transcript variant X1
calcium-activated potassium channel slowpoke-like, transcript variant X10
calcium-activated potassium channel slowpoke-like, transcript variant X13
calcium-activated potassium channel slowpoke-like, transcript variant X18
calcium-activated potassium channel slowpoke-like, transcript variant X12
calcium-activated potassium channel slowpoke-like, transcript variant X9
calcium-activated potassium channel slowpoke-like, transcript variant X15
calcium-activated potassium channel slowpoke-like, transcript variant X11
calcium-activated potassium channel slowpoke-like, transcript variant X19
calcium-activated potassium channel slowpoke-like, transcript variant X14
calcium-activated potassium channel slowpoke-like, transcript variant X21
calcium-activated potassium channel slowpoke-like, transcript variant X17
calcium-activated potassium channel slowpoke-like, transcript variant X22
calcium-activated potassium channel slowpoke-like, transcript variant X23
calcium-activated potassium channel slowpoke-like, transcript variant X20
calcium-activated potassium channel slowpoke-like, transcript variant X24
calcium-activated potassium channel slowpoke-like, transcript variant X26
calcium-activated potassium channel slowpoke-like, transcript variant X16
calcium-activated potassium channel slowpoke-like, transcript variant X25
calcium-activated potassium channel slowpoke-like, transcript variant X27
calcium-activated potassium channel slowpoke-like, transcript variant X28
calcium-activated potassium channel slowpoke-like, transcript variant X31
calcium-activated potassium channel slowpoke-like, transcript variant X30
calcium-activated potassium channel slowpoke-like, transcript variant X32
calcium-activated potassium channel slowpoke-like isoform X8
calcium-activated potassium channel slowpoke-like isoform X4
calcium-activated potassium channel slowpoke-like isoform X7
calcium-activated potassium channel slowpoke-like isoform X2
calcium-activated potassium channel slowpoke-like isoform X5
calcium-activated potassium channel slowpoke-like isoform X29
calcium-activated potassium channel slowpoke-like isoform X6
calcium-activated potassium channel slowpoke-like isoform X3
calcium-activated potassium channel slowpoke-like isoform X1
calcium-activated potassium channel slowpoke-like isoform X10
calcium-activated potassium channel slowpoke-like isoform X13
calcium-activated potassium channel slowpoke-like isoform X18
calcium-activated potassium channel slowpoke-like isoform X12
calcium-activated potassium channel slowpoke-like isoform X9
calcium-activated potassium channel slowpoke-like isoform X15
calcium-activated potassium channel slowpoke-like isoform X11
calcium-activated potassium channel slowpoke-like isoform X19
calcium-activated potassium channel slowpoke-like isoform X14
calcium-activated potassium channel slowpoke-like isoform X21
calcium-activated potassium channel slowpoke-like isoform X17
calcium-activated potassium channel slowpoke-like isoform X22
calcium-activated potassium channel slowpoke-like isoform X23
calcium-activated potassium channel slowpoke-like isoform X20
calcium-activated potassium channel slowpoke-like isoform X24
calcium-activated potassium channel slowpoke-like isoform X26
calcium-activated potassium channel slowpoke-like isoform X16
calcium-activated potassium channel slowpoke-like isoform X31
calcium-activated potassium channel slowpoke-like isoform X30
calcium-activated potassium channel slowpoke-like isoform X25
calcium-activated potassium channel slowpoke-like isoform X27
calcium-activated potassium channel slowpoke-like isoform X28
calcium-activated potassium channel slowpoke-like isoform X32
proline-rich protein HaeIII subfamily 1-like
uncharacterized LOC123769527, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123769527, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
uncharacterized LOC123769527, transcript variant X3
endoplasmic reticulum-Golgi intermediate compartment protein 2-like
protein kinase 3-like, transcript variant X3
protein kinase 3-like, transcript variant X2
protein kinase 3-like, transcript variant X1
uncharacterized protein LOC123769529 isoform X1
uncharacterized protein LOC123769529 isoform X2
protein kinase C-binding protein NELL2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
WD40 repeat-containing protein SMU1-like
uncharacterized LOC123769531, transcript variant X2
uncharacterized LOC123769531, transcript variant X1
uncharacterized protein LOC123769531 isoform X1
uncharacterized protein LOC123769531 isoform X2
NADH-ubiquinone oxidoreductase subunit 8-like
protein YIF1B-B-like, transcript variant X4
protein YIF1B-B-like, transcript variant X2
protein YIF1B-B-like, transcript variant X3
protein YIF1B-B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
probable inactive protein kinase DDB_G0270444
ras-specific guanine nucleotide-releasing factor 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ras-specific guanine nucleotide-releasing factor 2-like, transcript variant X2
ras-specific guanine nucleotide-releasing factor 2-like, transcript variant X3
ras-specific guanine nucleotide-releasing factor 2-like, transcript variant X4
ras-specific guanine nucleotide-releasing factor 2-like isoform X1
ras-specific guanine nucleotide-releasing factor 2-like isoform X2
ras-specific guanine nucleotide-releasing factor 2-like isoform X3
ras-specific guanine nucleotide-releasing factor 2-like isoform X4
uncharacterized LOC123769536, transcript variant X2
uncharacterized LOC123769536, transcript variant X1
uncharacterized LOC123769536, transcript variant X5
uncharacterized LOC123769536, transcript variant X6
uncharacterized LOC123769536, transcript variant X4
uncharacterized LOC123769536, transcript variant X3
coiled-coil domain-containing protein 130 homolog
39S ribosomal protein L23, mitochondrial-like
mediator of RNA polymerase II transcription subunit 17-like, transcript variant X1
mediator of RNA polymerase II transcription subunit 17-like, transcript variant X3
mediator of RNA polymerase II transcription subunit 17-like, transcript variant X2
mediator of RNA polymerase II transcription subunit 17-like isoform X1
mediator of RNA polymerase II transcription subunit 17-like isoform X3
mediator of RNA polymerase II transcription subunit 17-like isoform X2
DNA-directed RNA polymerase II subunit RPB1-like
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
neuroblast differentiation-associated protein AHNAK-like
putative uncharacterized protein ENSP00000383309
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
xaa-Pro dipeptidase-like, transcript variant X1
xaa-Pro dipeptidase-like, transcript variant X2
FAST kinase domain-containing protein 3, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
MTRF1L release factor glutamine methyltransferase-like, transcript variant X2
MTRF1L release factor glutamine methyltransferase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
MTRF1L release factor glutamine methyltransferase-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
MTRF1L release factor glutamine methyltransferase-like isoform X2
MTRF1L release factor glutamine methyltransferase-like isoform X1
MTRF1L release factor glutamine methyltransferase-like isoform X3
glucose-6-phosphate isomerase-like, transcript variant X2
glucose-6-phosphate isomerase-like, transcript variant X1
glucose-6-phosphate isomerase-like isoform X1
glucose-6-phosphate isomerase-like isoform X2
cytochrome b-c1 complex subunit 2, mitochondrial-like
zinc finger CCCH domain-containing protein 14-like, transcript variant X2
zinc finger CCCH domain-containing protein 14-like, transcript variant X1
zinc finger CCCH domain-containing protein 14-like isoform X2
zinc finger CCCH domain-containing protein 14-like isoform X1
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X1
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X2
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X3
carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X1
carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X2
intraflagellar transport protein 88 homolog, transcript variant X3
intraflagellar transport protein 88 homolog, transcript variant X1
intraflagellar transport protein 88 homolog, transcript variant X2
intraflagellar transport protein 88 homolog isoform X2
intraflagellar transport protein 88 homolog isoform X1
eukaryotic translation initiation factor 1A, Y-chromosomal-like
gamma-tubulin complex component 3 homolog
sodium-coupled monocarboxylate transporter 1-like
ovalbumin-related protein X-like, transcript variant X2
ovalbumin-related protein X-like, transcript variant X3
ovalbumin-related protein X-like, transcript variant X1
ovalbumin-related protein X-like isoform X2
ovalbumin-related protein X-like isoform X1
uncharacterized LOC123769562, transcript variant X1
uncharacterized LOC123769562, transcript variant X2
uncharacterized LOC123769563, transcript variant X7
uncharacterized LOC123769563, transcript variant X6
uncharacterized LOC123769563, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC123769563, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123769563, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
uncharacterized LOC123769563, transcript variant X2
uncharacterized LOC123769563, transcript variant X1
uncharacterized LOC123769563, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized protein LOC123769563 isoform X2
uncharacterized protein LOC123769563 isoform X1
uncharacterized protein LOC123769563 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
protein Wnt-5b-like, transcript variant X2
protein Wnt-5b-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 39% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized transmembrane protein DDB_G0289901-like
axoneme-associated protein mst101(2)-like
F-box/LRR-repeat protein 14-like, transcript variant X5
F-box/LRR-repeat protein 14-like, transcript variant X4
F-box/LRR-repeat protein 14-like, transcript variant X2
F-box/LRR-repeat protein 14-like, transcript variant X3
F-box/LRR-repeat protein 14-like, transcript variant X1
glutenin, high molecular weight subunit PW212-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
protein Wnt-5b-like, transcript variant X1