Procambarus clarkii strain Jiangsu linkage group LG56, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035528.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized oxidoreductase YjmC-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized oxidoreductase YjmC-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized oxidoreductase YjmC-like isoform X1
uncharacterized oxidoreductase YjmC-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
zinc finger CCHC domain-containing protein 10-like
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
signaling mucin HKR1-like, transcript variant X6
signaling mucin HKR1-like, transcript variant X5
signaling mucin HKR1-like, transcript variant X7
signaling mucin HKR1-like, transcript variant X2
signaling mucin HKR1-like, transcript variant X1
signaling mucin HKR1-like, transcript variant X3
signaling mucin HKR1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
sperm head and tail associated protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
activating signal cointegrator 1 complex subunit 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123768907, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
C-type lectin-like, transcript variant X2
C-type lectin-like, transcript variant X1
uncharacterized LOC123768909, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
uncharacterized LOC123768909, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
neuronal PAS domain-containing protein 4-like
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
probable RNA-binding protein 46, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
probable RNA-binding protein 46, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
probable RNA-binding protein 46 isoform X2
probable RNA-binding protein 46 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial import inner membrane translocase subunit Tim16-like, transcript variant X2
mitochondrial import inner membrane translocase subunit Tim16-like, transcript variant X1
mitochondrial import inner membrane translocase subunit Tim16-like isoform X2
nudix hydrolase 15, mitochondrial-like isoform X1
dynein axonemal heavy chain 7-like, transcript variant X1
dynein axonemal heavy chain 7-like, transcript variant X3
dynein axonemal heavy chain 7-like, transcript variant X4
dynein axonemal heavy chain 7-like, transcript variant X5
dynein axonemal heavy chain 7-like, transcript variant X2
dynein axonemal heavy chain 7-like isoform X1
dynein axonemal heavy chain 7-like isoform X2
dynein axonemal heavy chain 7-like isoform X3
golgin subfamily A member 1-like, transcript variant X3
golgin subfamily A member 1-like, transcript variant X4
golgin subfamily A member 1-like, transcript variant X1
golgin subfamily A member 1-like, transcript variant X2
golgin subfamily A member 1-like isoform X1
golgin subfamily A member 1-like isoform X2
golgin subfamily A member 1-like isoform X4
golgin subfamily A member 1-like isoform X3
golgin subfamily A member 1-like, transcript variant X5
golgin subfamily A member 1-like, transcript variant X6
golgin subfamily A member 1-like isoform X5
golgin subfamily A member 1-like isoform X6
actin-binding protein IPP-like, transcript variant X2
actin-binding protein IPP-like, transcript variant X1
kinase D-interacting substrate of 220 kDa B-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
kinase D-interacting substrate of 220 kDa B-like, transcript variant X3
kinase D-interacting substrate of 220 kDa B-like, transcript variant X1
kinase D-interacting substrate of 220 kDa B-like, transcript variant X5
kinase D-interacting substrate of 220 kDa B-like, transcript variant X2
kinase D-interacting substrate of 220 kDa B-like, transcript variant X4
kinase D-interacting substrate of 220 kDa B-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
kinase D-interacting substrate of 220 kDa B-like, transcript variant X7
kinase D-interacting substrate of 220 kDa B-like isoform X1
kinase D-interacting substrate of 220 kDa B-like isoform X5
kinase D-interacting substrate of 220 kDa B-like isoform X2
kinase D-interacting substrate of 220 kDa B-like isoform X4
kinase D-interacting substrate of 220 kDa B-like isoform X3
kinase D-interacting substrate of 220 kDa B-like isoform X6
kinase D-interacting substrate of 220 kDa B-like isoform X7
kinase D-interacting substrate of 220 kDa B-like, transcript variant X9
kinase D-interacting substrate of 220 kDa B-like isoform X9
kinase D-interacting substrate of 220 kDa B-like, transcript variant X10
kinase D-interacting substrate of 220 kDa B-like isoform X10
kinase D-interacting substrate of 220 kDa B-like, transcript variant X8
kinase D-interacting substrate of 220 kDa B-like isoform X8
leucine-rich repeat extensin-like protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
kinase D-interacting substrate of 220 kDa B-like isoform X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123769087, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123769087, transcript variant X2
ER membrane protein complex subunit 2-like, transcript variant X2
ER membrane protein complex subunit 2-like, transcript variant X1
ER membrane protein complex subunit 2-like isoform X2
ER membrane protein complex subunit 2-like isoform X1
33 kDa inner dynein arm light chain, axonemal-like
BRCA1-associated RING domain protein 1-like
receptor-type guanylate cyclase gcy-13-like, transcript variant X1
receptor-type guanylate cyclase gcy-13-like, transcript variant X4
receptor-type guanylate cyclase gcy-13-like, transcript variant X3
receptor-type guanylate cyclase gcy-13-like, transcript variant X2
receptor-type guanylate cyclase gcy-13-like, transcript variant X5
uncharacterized protein LOC123768923 isoform X1
receptor-type guanylate cyclase gcy-13-like isoform X2
golgin subfamily A member 6-like protein 22
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
FHF complex subunit HOOK interacting protein 1B-like isoform X2
FHF complex subunit HOOK interacting protein 1B-like isoform X3
FHF complex subunit HOOK interacting protein 1B-like isoform X5
FHF complex subunit HOOK interacting protein 1B-like isoform X1
FHF complex subunit HOOK interacting protein 1B-like isoform X4
guanine nucleotide-binding protein subunit beta-2-like 1
retinol dehydrogenase 12-like, transcript variant X1
retinol dehydrogenase 12-like, transcript variant X2
retinol dehydrogenase 12-like isoform X1
retinol dehydrogenase 12-like isoform X2
transcription initiation factor TFIID subunit 5-like
ras-related protein Rab-5C-like, transcript variant X2
ras-related protein Rab-5C-like, transcript variant X4
ras-related protein Rab-5C-like, transcript variant X3
ras-related protein Rab-5C-like, transcript variant X1
zinc transporter 9-like, transcript variant X2
zinc transporter 9-like, transcript variant X1
anaphase-promoting complex subunit 10-like, transcript variant X1
anaphase-promoting complex subunit 10-like, transcript variant X2
anaphase-promoting complex subunit 10-like, transcript variant X3
anaphase-promoting complex subunit 10-like
UDP-sugar transporter UST74c-like, transcript variant X1
UDP-sugar transporter UST74c-like, transcript variant X2
UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like isoform X1
UDP-sugar transporter UST74c-like isoform X2
molybdate-anion transporter-like, transcript variant X1
molybdate-anion transporter-like, transcript variant X2
molybdate-anion transporter-like, transcript variant X3
cAMP-responsive element-binding protein-like 2, transcript variant X3
cAMP-responsive element-binding protein-like 2, transcript variant X2
cAMP-responsive element-binding protein-like 2, transcript variant X1
cAMP-responsive element-binding protein-like 2 isoform X3
cAMP-responsive element-binding protein-like 2 isoform X2
cAMP-responsive element-binding protein-like 2 isoform X1
stromal cell-derived factor 2-like, transcript variant X2
stromal cell-derived factor 2-like, transcript variant X3
stromal cell-derived factor 2-like, transcript variant X1
protein bric-a-brac 1-like, transcript variant X4
protein bric-a-brac 1-like, transcript variant X5
protein bric-a-brac 1-like, transcript variant X1
protein bric-a-brac 1-like, transcript variant X2
protein bric-a-brac 1-like, transcript variant X3
protein bric-a-brac 1-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
protein bric-a-brac 1-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
protein bric-a-brac 1-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
U1 small nuclear ribonucleoprotein 70 kDa-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
splicing factor U2AF 50 kDa subunit-like
uncharacterized LOC123768942, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein LOC123768942 isoform X2
uncharacterized LOC123768942, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC123768942 isoform X1
uncharacterized LOC123768943, transcript variant X1
uncharacterized LOC123768943, transcript variant X3
uncharacterized LOC123768943, transcript variant X2
uncharacterized protein LOC123768943 isoform X1
uncharacterized protein LOC123768943 isoform X3
uncharacterized protein LOC123768943 isoform X2
phosphatidate phosphatase LPIN3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
phosphatidate phosphatase LPIN3-like, transcript variant X4
phosphatidate phosphatase LPIN3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
phosphatidate phosphatase LPIN3-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
phosphatidate phosphatase LPIN3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
phosphatidate phosphatase LPIN3-like, transcript variant X7
phosphatidate phosphatase LPIN3-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
nuclear receptor coactivator 5-like, transcript variant X1
nuclear receptor coactivator 5-like, transcript variant X2
nuclear receptor coactivator 5-like isoform X1
nuclear receptor coactivator 5-like isoform X2
uncharacterized LOC123768946, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123768946, transcript variant X1
uncharacterized protein LOC123768946 isoform X2
uncharacterized protein LOC123768946 isoform X1
transformer-2 protein homolog alpha-like, transcript variant X9
transformer-2 protein homolog alpha-like, transcript variant X8
transformer-2 protein homolog alpha-like, transcript variant X1
transformer-2 protein homolog alpha-like, transcript variant X3
transformer-2 protein homolog alpha-like, transcript variant X4
transformer-2 protein homolog alpha-like isoform X1
transformer-2 protein homolog alpha-like isoform X3
transformer-2 protein homolog alpha-like isoform X4
transformer-2 protein homolog alpha-like, transcript variant X2
transformer-2 protein homolog alpha-like isoform X2
transformer-2 protein homolog alpha-like, transcript variant X5
transformer-2 protein homolog alpha-like, transcript variant X6
transformer-2 protein homolog alpha-like, transcript variant X7
transformer-2 protein homolog alpha-like isoform X5
transformer-2 protein homolog alpha-like isoform X6
transformer-2 protein homolog alpha-like isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
thioredoxin domain-containing protein 5 homolog
transient receptor potential cation channel subfamily A member 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium-activated chloride channel regulator 2-like, transcript variant X2
calcium-activated chloride channel regulator 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
calcium-activated chloride channel regulator 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
calcium-activated chloride channel regulator 2-like isoform X2
calcium-activated chloride channel regulator 2-like isoform X1
calcium-activated chloride channel regulator family member 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
general transcription and DNA repair factor IIH helicase subunit XPB-like, transcript variant X2
general transcription and DNA repair factor IIH helicase subunit XPB-like, transcript variant X3
general transcription and DNA repair factor IIH helicase subunit XPB-like, transcript variant X1
general transcription and DNA repair factor IIH helicase subunit XPB-like isoform X1
general transcription and DNA repair factor IIH helicase subunit XPB-like isoform X2
E3 ubiquitin-protein ligase MARCHF4-like, transcript variant X1
E3 ubiquitin-protein ligase MARCHF4-like, transcript variant X3
E3 ubiquitin-protein ligase MARCHF4-like, transcript variant X2
E3 ubiquitin-protein ligase MARCHF4-like, transcript variant X4
uncharacterized protein LOC123768956 isoform X1
E3 ubiquitin-protein ligase MARCHF4-like isoform X2
E3 ubiquitin-protein ligase MARCHF4-like isoform X3
uncharacterized protein LOC123768956 isoform X4
uncharacterized LOC123768961, transcript variant X1
uncharacterized LOC123768961, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
uncharacterized protein LOC123768961 isoform X1
uncharacterized protein LOC123768961 isoform X2
rho GTPase-activating protein 39-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
rho GTPase-activating protein 39-like, transcript variant X4
rho GTPase-activating protein 39-like isoform X6
dentin sialophosphoprotein-like isoform X5
dentin sialophosphoprotein-like isoform X2
dentin sialophosphoprotein-like isoform X4
dentin sialophosphoprotein-like isoform X1
dentin sialophosphoprotein-like isoform X3
TBC1 domain family member 25-like, transcript variant X1
TBC1 domain family member 25-like, transcript variant X2
TBC1 domain family member 25-like isoform X1
TBC1 domain family member 25-like isoform X2
TBC1 domain family member 25-like, transcript variant X3
TBC1 domain family member 25-like isoform X3
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
fibril-forming collagen alpha chain-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
adapter molecule Crk-like, transcript variant X2
adapter molecule Crk-like, transcript variant X5
adapter molecule Crk-like, transcript variant X4
adapter molecule Crk-like, transcript variant X3
adapter molecule Crk-like, transcript variant X1
MICOS complex subunit Mic60-like, transcript variant X1
MICOS complex subunit Mic60-like, transcript variant X2
MICOS complex subunit Mic60-like isoform X1
MICOS complex subunit Mic60-like isoform X2
diphthine--ammonia ligase-like, transcript variant X1
diphthine--ammonia ligase-like, transcript variant X2
diphthine--ammonia ligase-like isoform X1
diphthine--ammonia ligase-like isoform X2
diphthine--ammonia ligase-like, transcript variant X3
diphthine--ammonia ligase-like isoform X3
uncharacterized LOC123768969, transcript variant X1
uncharacterized LOC123768969, transcript variant X2
uncharacterized LOC123768969, transcript variant X3
uncharacterized LOC123768969, transcript variant X4
uncharacterized protein LOC123768969 isoform X1
uncharacterized protein LOC123768969 isoform X2
serine-aspartate repeat-containing protein I-like
motile sperm domain-containing protein 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
motile sperm domain-containing protein 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
motile sperm domain-containing protein 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
motile sperm domain-containing protein 2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
motile sperm domain-containing protein 2-like
choline/ethanolamine kinase-like, transcript variant X1
choline/ethanolamine kinase-like isoform X1
choline/ethanolamine kinase-like, transcript variant X2
choline/ethanolamine kinase-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X1
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X2
gamma-aminobutyric acid type B receptor subunit 1-like isoform X2
gamma-aminobutyric acid type B receptor subunit 1-like isoform X1
syntaxin-1A-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
syntaxin-1A-like, transcript variant X11
syntaxin-1A-like, transcript variant X13
syntaxin-1A-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
uncharacterized LOC123768985, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768985, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768987, transcript variant X2
uncharacterized LOC123768987, transcript variant X1
uncharacterized protein LOC123768987 isoform X1
uncharacterized protein LOC123768987 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768989, transcript variant X2
uncharacterized LOC123768989, transcript variant X1
uncharacterized protein LOC123768989 isoform X2
uncharacterized protein LOC123768989 isoform X1
uncharacterized LOC123768989, transcript variant X3
uncharacterized protein LOC123768989 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
putative mediator of RNA polymerase II transcription subunit 26
leucine-rich repeat extensin-like protein 3
enhancer of mRNA-decapping protein 3-like, transcript variant X2
enhancer of mRNA-decapping protein 3-like, transcript variant X1
enhancer of mRNA-decapping protein 3-like
facilitated trehalose transporter Tret1-like, transcript variant X1
facilitated trehalose transporter Tret1-2 homolog isoform X1
facilitated trehalose transporter Tret1-like, transcript variant X2
facilitated trehalose transporter Tret1-like, transcript variant X3
facilitated trehalose transporter Tret1-like, transcript variant X5
facilitated trehalose transporter Tret1-like, transcript variant X4
facilitated trehalose transporter Tret1-like, transcript variant X6
facilitated trehalose transporter Tret1-2 homolog isoform X2
facilitated trehalose transporter Tret1-like isoform X3
sodium/hydrogen exchanger 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
sodium/hydrogen exchanger 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
sodium/hydrogen exchanger 2-like isoform X1
sodium/hydrogen exchanger 3-like isoform X2
26S proteasome non-ATPase regulatory subunit 11-like
multifunctional methyltransferase subunit TRM112-like protein
cilia- and flagella-associated protein 251-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein C11orf24 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
bromodomain and PHD finger-containing protein 3-like, transcript variant X1
bromodomain and PHD finger-containing protein 3-like, transcript variant X2
bromodomain and PHD finger-containing protein 3-like, transcript variant X3
bromodomain and PHD finger-containing protein 3-like, transcript variant X4
bromodomain and PHD finger-containing protein 3-like, transcript variant X5
bromodomain and PHD finger-containing protein 3-like isoform X3
bromodomain and PHD finger-containing protein 3-like isoform X4
bromodomain and PHD finger-containing protein 3-like isoform X5
cytochrome P450 2L1-like, transcript variant X1
cytochrome P450 2L1-like, transcript variant X2
cytochrome P450 2L1-like, transcript variant X4
cytochrome P450 2L1-like, transcript variant X3
uncharacterized LOC123769014, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein LOC123769014 isoform X1
uncharacterized LOC123769014, transcript variant X2
uncharacterized protein LOC123769014 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123769017, transcript variant X1
uncharacterized protein LOC123769017 isoform X1
uncharacterized LOC123769017, transcript variant X2
uncharacterized LOC123769017, transcript variant X3
uncharacterized protein LOC123769017 isoform X2
protein artichoke-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein artichoke-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
protein artichoke-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
zwei Ig domain protein zig-8-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
zwei Ig domain protein zig-8-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
gastrula zinc finger protein XlCGF57.1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 55% coverage of the annotated genomic feature by RNAseq alignments
proline-rich receptor-like protein kinase PERK10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
serine/arginine repetitive matrix protein 5-like
hemocyte protein-glutamine gamma-glutamyltransferase-like, transcript variant X2
hemocyte protein-glutamine gamma-glutamyltransferase-like, transcript variant X1
hemocyte protein-glutamine gamma-glutamyltransferase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
splicing regulatory glutamine/lysine-rich protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments