Procambarus clarkii strain Jiangsu linkage group LG55, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035527.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
mediator of RNA polymerase II transcription subunit 15-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 19% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768625, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123768625, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X9
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like isoform X1
UDP-xylose and UDP-N-acetylglucosamine transporter-like isoform X2
UDP-xylose and UDP-N-acetylglucosamine transporter-like isoform X3
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
UDP-xylose and UDP-N-acetylglucosamine transporter-like isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized LOC123768632, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized LOC123768632, transcript variant X2
serine proteinase stubble-like, transcript variant X1
serine proteinase stubble-like, transcript variant X3
serine proteinase stubble-like isoform X2
uncharacterized protein LOC123768634 isoform X1
serine proteinase stubble-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123768635, transcript variant X3
uncharacterized LOC123768635, transcript variant X1
uncharacterized LOC123768635, transcript variant X2
similar to RNA sequence (same species):INSD:GBEV01002927.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 755 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 414 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 23% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
LIM and senescent cell antigen-like-containing domain protein 1, transcript variant X2
LIM and senescent cell antigen-like-containing domain protein 1, transcript variant X1
LIM and senescent cell antigen-like-containing domain protein 1 isoform X2
LIM and senescent cell antigen-like-containing domain protein 1 isoform X1
uncharacterized LOC123768641, transcript variant X1
uncharacterized LOC123768641, transcript variant X3
uncharacterized LOC123768641, transcript variant X6
uncharacterized LOC123768641, transcript variant X2
uncharacterized LOC123768641, transcript variant X4
uncharacterized LOC123768641, transcript variant X7
uncharacterized LOC123768641, transcript variant X5
uncharacterized protein LOC123768641 isoform X1
uncharacterized protein LOC123768641 isoform X2
KH domain-containing, RNA-binding, signal transduction-associated protein 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
KH domain-containing, RNA-binding, signal transduction-associated protein 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
KH domain-containing, RNA-binding, signal transduction-associated protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 339 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123768644, transcript variant X1
uncharacterized LOC123768644, transcript variant X2
uncharacterized protein LOC123768644 isoform X2
uncharacterized protein LOC123768644 isoform X1
ubiquitin carboxyl-terminal hydrolase 14-like
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X6
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X3
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X2
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X5
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X1
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial, transcript variant X4
probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial
mediator of RNA polymerase II transcription subunit 19-like
transmembrane protein 62-like, transcript variant X1
transmembrane protein 62-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 62-like, transcript variant X2
transmembrane protein 62-like isoform X1
transmembrane protein 62-like isoform X2
transmembrane protein 62-like isoform X3
trafficking kinesin-binding protein 1-like, transcript variant X4
trafficking kinesin-binding protein 1-like, transcript variant X8
trafficking kinesin-binding protein 1-like, transcript variant X7
trafficking kinesin-binding protein 1-like, transcript variant X3
trafficking kinesin-binding protein 1-like, transcript variant X2
trafficking kinesin-binding protein 1-like, transcript variant X1
trafficking kinesin-binding protein 1-like, transcript variant X6
trafficking kinesin-binding protein 1-like, transcript variant X5
trafficking kinesin-binding protein 1-like isoform X5
trafficking kinesin-binding protein 1-like isoform X2
trafficking kinesin-binding protein 1-like isoform X1
trafficking kinesin-binding protein 1-like isoform X3
trafficking kinesin-binding protein 1-like isoform X6
trafficking kinesin-binding protein 1-like isoform X4
myb/SANT-like DNA-binding domain-containing protein 3, transcript variant X2
myb/SANT-like DNA-binding domain-containing protein 3, transcript variant X1
myb/SANT-like DNA-binding domain-containing protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
conserved oligomeric Golgi complex subunit 8-like
uncharacterized PE-PGRS family protein PE_PGRS24-like
negative elongation factor B-like, transcript variant X1
negative elongation factor B-like, transcript variant X2
negative elongation factor B-like, transcript variant X3
protein phosphatase 1 regulatory subunit 16A-like, transcript variant X4
protein phosphatase 1 regulatory subunit 16A-like, transcript variant X2
protein phosphatase 1 regulatory subunit 16A-like, transcript variant X3
protein phosphatase 1 regulatory subunit 16A-like, transcript variant X1
protein phosphatase 1 regulatory subunit 16A-like
probable dimethyladenosine transferase, transcript variant X2
probable dimethyladenosine transferase, transcript variant X1
myelin expression factor 2-like, transcript variant X1
myelin expression factor 2-like, transcript variant X2
myelin expression factor 2-like, transcript variant X3
myelin expression factor 2-like isoform X1
heterogeneous nuclear ribonucleoprotein M-like isoform X2
myelin expression factor 2-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
geranylgeranyl transferase type-1 subunit beta-like, transcript variant X1
geranylgeranyl transferase type-1 subunit beta-like, transcript variant X2
geranylgeranyl transferase type-1 subunit beta-like isoform X1
geranylgeranyl transferase type-1 subunit beta-like isoform X2
protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A-like
acetylcholinesterase-like, transcript variant X1
acetylcholinesterase-like, transcript variant X3
acetylcholinesterase-like, transcript variant X2
acetylcholinesterase-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 8% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768666, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123768666, transcript variant X3
uncharacterized LOC123768666, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123768668, transcript variant X1
uncharacterized LOC123768668, transcript variant X3
uncharacterized LOC123768668, transcript variant X2
uncharacterized protein LOC123768668 isoform X1
uncharacterized protein LOC123768668 isoform X3
uncharacterized protein LOC123768668 isoform X2
uncharacterized LOC123768668, transcript variant X4
uncharacterized protein LOC123768668 isoform X4
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123768861, transcript variant X1
uncharacterized LOC123768861, transcript variant X2
uncharacterized protein LOC123768861 isoform X1
uncharacterized protein LOC123768861 isoform X2
uncharacterized LOC123768669, transcript variant X8
uncharacterized LOC123768669, transcript variant X7
uncharacterized LOC123768669, transcript variant X9
uncharacterized LOC123768669, transcript variant X1
uncharacterized LOC123768669, transcript variant X5
uncharacterized LOC123768669, transcript variant X2
uncharacterized LOC123768669, transcript variant X3
uncharacterized LOC123768669, transcript variant X4
uncharacterized LOC123768669, transcript variant X6
uncharacterized protein LOC123768669 isoform X1
uncharacterized protein LOC123768669 isoform X5
uncharacterized protein LOC123768669 isoform X2
uncharacterized protein LOC123768669 isoform X3
uncharacterized protein LOC123768669 isoform X4
uncharacterized protein LOC123768669 isoform X6
uncharacterized protein LOC123768669 isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
conserved oligomeric Golgi complex subunit 6-like
uncharacterized serine-rich protein C215.13-like
uncharacterized protein DDB_G0271670-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
probable serine--tRNA ligase, cytoplasmic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
uncharacterized LOC123768678, transcript variant X3
uncharacterized LOC123768678, transcript variant X1
uncharacterized LOC123768678, transcript variant X2
fibril-forming collagen alpha chain-like
thread biopolymer filament subunit alpha-like
uncharacterized proline-rich protein-like
MATH and LRR domain-containing protein PFE0570w-like, transcript variant X1
MATH and LRR domain-containing protein PFE0570w-like, transcript variant X2
MATH and LRR domain-containing protein PFE0570w-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
doublecortin domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
parathyroid hormone/parathyroid hormone-related peptide receptor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 45-like, transcript variant X1
leucine-rich repeat-containing protein 45-like, transcript variant X2
leucine-rich repeat-containing protein 45-like isoform X1
leucine-rich repeat-containing protein 45-like isoform X2
uncharacterized LOC123768690, transcript variant X2
uncharacterized LOC123768690, transcript variant X1
rab GDP dissociation inhibitor alpha-like
junctophilin-1-like, transcript variant X1
junctophilin-1-like, transcript variant X2
cleavage stimulation factor subunit 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like, transcript variant X2
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like, transcript variant X3
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like, transcript variant X4
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like, transcript variant X1
3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like
uncharacterized LOC123768700, transcript variant X2
uncharacterized LOC123768700, transcript variant X4
uncharacterized LOC123768700, transcript variant X3
uncharacterized LOC123768700, transcript variant X1
glutamate receptor ionotropic, delta-2-like
DNA polymerase epsilon catalytic subunit A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768704, transcript variant X2
uncharacterized protein LOC123768704 isoform X2
uncharacterized LOC123768704, transcript variant X1
uncharacterized LOC123768704, transcript variant X3
uncharacterized protein LOC123768704 isoform X1
uncharacterized LOC123768704, transcript variant X4
uncharacterized protein LOC123768704 isoform X3
uncharacterized LOC123768704, transcript variant X5
uncharacterized protein LOC123768704 isoform X4
uncharacterized LOC123768709, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized LOC123768709, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123768868, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC123768868, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
alanyl-tRNA editing protein Aarsd1-B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
baculoviral IAP repeat-containing protein 7-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
baculoviral IAP repeat-containing protein 7-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
baculoviral IAP repeat-containing protein 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
glutamate receptor ionotropic, delta-2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
glutamate receptor ionotropic, delta-2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
glutamate receptor ionotropic, delta-2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
glutamate receptor ionotropic, delta-2-like isoform X2
uncharacterized protein LOC123768721 isoform X3
glutamate receptor ionotropic, delta-2-like isoform X1
uncharacterized protein LOC123768722 isoform X3
uncharacterized LOC123768723, transcript variant X5
uncharacterized LOC123768723, transcript variant X7
uncharacterized LOC123768723, transcript variant X1
uncharacterized LOC123768723, transcript variant X3
uncharacterized LOC123768723, transcript variant X2
uncharacterized LOC123768723, transcript variant X4
uncharacterized protein LOC123768723 isoform X1
uncharacterized LOC123768723, transcript variant X6
uncharacterized protein LOC123768723 isoform X2
similar to RNA sequence (same species):INSD:GBEV01050598.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 129 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 129 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase Nedd-4-like, transcript variant X1
E3 ubiquitin-protein ligase Nedd-4-like, transcript variant X2
E3 ubiquitin-protein ligase Nedd-4-like isoform X1
E3 ubiquitin-protein ligase NEDD4-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
beta-1,3-galactosyltransferase 2-like, transcript variant X1
beta-1,3-galactosyltransferase 2-like, transcript variant X2
beta-1,3-galactosyltransferase 2-like isoform X2
beta-1,3-galactosyltransferase 2-like isoform X1
corticotropin-releasing factor receptor 1-like
uncharacterized transporter slc-17.2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
RCC1 domain-containing protein RUG3, mitochondrial-like, transcript variant X5
RCC1 domain-containing protein RUG3, mitochondrial-like, transcript variant X3
RCC1 domain-containing protein RUG3, mitochondrial-like, transcript variant X4
RCC1 domain-containing protein RUG3, mitochondrial-like, transcript variant X2
RCC1 domain-containing protein RUG3, mitochondrial-like, transcript variant X1
RCC1 domain-containing protein RUG3, mitochondrial-like
spindle assembly abnormal protein 6 homolog, transcript variant X2
spindle assembly abnormal protein 6 homolog, transcript variant X3
spindle assembly abnormal protein 6 homolog, transcript variant X1
spindle assembly abnormal protein 6 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
spindle assembly abnormal protein 6 homolog isoform X1
spindle assembly abnormal protein 6 homolog isoform X2
uncharacterized LOC123768734, transcript variant X2
uncharacterized LOC123768734, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123768734, transcript variant X1
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X11
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X8
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X10
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X1
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X4
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X9
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X5
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X7
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X3
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X6
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X2
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X13
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X12
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X16
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X14
endoplasmic reticulum membrane sensor NFE2L1-like, transcript variant X15
segmentation protein cap'n'collar-like isoform X7
segmentation protein cap'n'collar-like isoform X9
endoplasmic reticulum membrane sensor NFE2L1-like isoform X3
endoplasmic reticulum membrane sensor NFE2L1-like isoform X8
endoplasmic reticulum membrane sensor NFE2L1-like isoform X5
endoplasmic reticulum membrane sensor NFE2L1-like isoform X4
segmentation protein cap'n'collar-like isoform X6
endoplasmic reticulum membrane sensor NFE2L1-like isoform X2
endoplasmic reticulum membrane sensor NFE2L1-like isoform X1
segmentation protein cap'n'collar-like isoform X11
segmentation protein cap'n'collar-like isoform X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123768740, transcript variant X2
uncharacterized LOC123768740, transcript variant X1
uncharacterized protein LOC123768740 isoform X2
uncharacterized protein LOC123768740 isoform X1
glutamate receptor ionotropic, delta-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable ATP-dependent RNA helicase vasa-like, transcript variant X4
probable ATP-dependent RNA helicase vasa-like, transcript variant X1
probable ATP-dependent RNA helicase vasa-like, transcript variant X3
probable ATP-dependent RNA helicase vasa-like, transcript variant X2
probable ATP-dependent RNA helicase vasa-like, transcript variant X5
probable ATP-dependent RNA helicase vasa-like isoform X2
probable ATP-dependent RNA helicase vasa-like isoform X1
probable ATP-dependent RNA helicase vasa-like isoform X3
all trans-polyprenyl-diphosphate synthase PDSS1-like
39S ribosomal protein L32, mitochondrial-like
S-phase kinase-associated protein 2-like, transcript variant X2
S-phase kinase-associated protein 2-like, transcript variant X1
S-phase kinase-associated protein 2-like isoform X2
S-phase kinase-associated protein 2-like isoform X1
phosphoacetylglucosamine mutase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
phosphoacetylglucosamine mutase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
phosphoacetylglucosamine mutase-like isoform X1
phosphoacetylglucosamine mutase-like isoform X2
spermatogenesis-defective protein 39 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
spermatogenesis-defective protein 39 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
spermatogenesis-defective protein 39 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
spermatogenesis-defective protein 39 homolog isoform X2
spermatogenesis-defective protein 39 homolog isoform X1
spermatogenesis-defective protein 39 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
protein argonaute-2-like, transcript variant X3
protein argonaute-2-like, transcript variant X1
protein argonaute-2-like, transcript variant X2
scm-like with four MBT domains protein 1
baculoviral IAP repeat-containing protein 7-B-like
uncharacterized LOC123768752, transcript variant X6
uncharacterized LOC123768752, transcript variant X9
uncharacterized LOC123768752, transcript variant X8
uncharacterized LOC123768752, transcript variant X2
uncharacterized LOC123768752, transcript variant X4
uncharacterized protein LOC123768752 isoform X3
uncharacterized LOC123768752, transcript variant X1
uncharacterized LOC123768752, transcript variant X5
uncharacterized LOC123768752, transcript variant X11
uncharacterized LOC123768752, transcript variant X3
uncharacterized LOC123768752, transcript variant X7
uncharacterized LOC123768752, transcript variant X10
uncharacterized protein LOC123768752 isoform X1
uncharacterized protein LOC123768752 isoform X2
uncharacterized protein LOC123768752 isoform X4
NAD(+) hydrolase sarm1-like, transcript variant X1
NAD(+) hydrolase sarm1-like, transcript variant X5
NAD(+) hydrolase sarm1-like, transcript variant X3
NAD(+) hydrolase sarm1-like, transcript variant X2
NAD(+) hydrolase sarm1-like, transcript variant X4
NAD(+) hydrolase sarm1-like, transcript variant X8
NAD(+) hydrolase sarm1-like, transcript variant X9
NAD(+) hydrolase sarm1-like, transcript variant X10
NAD(+) hydrolase sarm1-like, transcript variant X7
NAD(+) hydrolase sarm1-like, transcript variant X6
repetitive proline-rich cell wall protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
basic salivary proline-rich protein 3-like
uncharacterized LOC123768756, transcript variant X4
uncharacterized LOC123768756, transcript variant X5
uncharacterized LOC123768756, transcript variant X1
uncharacterized LOC123768756, transcript variant X2
uncharacterized LOC123768756, transcript variant X3
uncharacterized protein LOC123768756 isoform X3
uncharacterized protein LOC123768756 isoform X1
uncharacterized protein LOC123768756 isoform X2
transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
carbonic anhydrase-related protein 10-like
similar to RNA sequence (same species):INSD:GBEV01016972.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 54 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 54 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
alpha-catulin-like, transcript variant X2
alpha-catulin-like, transcript variant X1
alpha-catulin-like, transcript variant X3
alpha-catulin-like, transcript variant X7
alpha-catulin-like, transcript variant X6
alpha-catulin-like, transcript variant X4
alpha-catulin-like, transcript variant X5
zygotic DNA replication licensing factor mcm3-like
kinesin-associated protein 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
kinesin-associated protein 3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
kinesin-associated protein 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
kinesin-associated protein 3-like, transcript variant X4
kinesin-associated protein 3-like isoform X1
kinesin-associated protein 3-like isoform X3
kinesin-associated protein 3-like isoform X2
kinesin-associated protein 3-like isoform X4
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, transcript variant X2
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2
androgen-induced gene 1 protein-like, transcript variant X4
androgen-induced gene 1 protein-like, transcript variant X3
androgen-induced gene 1 protein-like, transcript variant X1
androgen-induced gene 1 protein-like, transcript variant X2
androgen-induced gene 1 protein-like isoform X2
androgen-induced gene 1 protein-like isoform X1
protein trachealess-like, transcript variant X2
protein trachealess-like, transcript variant X1
protein trachealess-like, transcript variant X3
protein trachealess-like, transcript variant X4
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123768771, transcript variant X3
uncharacterized LOC123768771, transcript variant X5
uncharacterized LOC123768771, transcript variant X4
uncharacterized LOC123768771, transcript variant X2
uncharacterized LOC123768771, transcript variant X1
protein Mpv17-like, transcript variant X1
protein Mpv17-like, transcript variant X2
heat shock protein 75 kDa, mitochondrial-like
uncharacterized LOC123768774, transcript variant X3
uncharacterized LOC123768774, transcript variant X2
uncharacterized LOC123768774, transcript variant X1
uncharacterized LOC123768774, transcript variant X4
basic salivary proline-rich protein 1-like
neural cell adhesion molecule 2-like, transcript variant X1
neural cell adhesion molecule 2-like, transcript variant X2
neural cell adhesion molecule 2-like, transcript variant X3
neural cell adhesion molecule 2-like isoform X1
neural cell adhesion molecule 2-like isoform X2
limbic system-associated membrane protein-like isoform X3
neural cell adhesion molecule 2-like, transcript variant X4
neural cell adhesion molecule 2-like isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123768779, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123768779, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC123768782, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized LOC123768782, transcript variant X1
uncharacterized LOC123768782, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns