Procambarus clarkii strain Jiangsu linkage group LG52, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035524.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 3 subunit A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
serine/arginine repetitive matrix protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
probable kinetochore protein SPC25, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
probable kinetochore protein SPC25, transcript variant X4
probable kinetochore protein SPC25, transcript variant X2
probable kinetochore protein SPC25, transcript variant X5
probable kinetochore protein SPC25, transcript variant X3
alpha-(1,3)-fucosyltransferase C-like, transcript variant X2
alpha-(1,3)-fucosyltransferase C-like, transcript variant X1
alpha-(1,3)-fucosyltransferase C-like, transcript variant X3
alpha-(1,3)-fucosyltransferase C-like isoform X2
alpha-(1,3)-fucosyltransferase C-like isoform X1
cytochrome c oxidase assembly protein COX11, mitochondrial-like
liprin-alpha-2-like, transcript variant X10
liprin-alpha-2-like, transcript variant X2
liprin-alpha-2-like, transcript variant X1
liprin-alpha-2-like, transcript variant X3
liprin-alpha-2-like, transcript variant X8
liprin-alpha-2-like, transcript variant X4
liprin-alpha-2-like, transcript variant X9
liprin-alpha-2-like, transcript variant X5
liprin-alpha-2-like, transcript variant X7
liprin-alpha-2-like, transcript variant X6
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like, transcript variant X1
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like isoform X1
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like, transcript variant X2
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like isoform X2
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like, transcript variant X3
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like isoform X3
putative transmembrane protein 183BP, transcript variant X5
putative transmembrane protein 183BP, transcript variant X1
putative transmembrane protein 183BP, transcript variant X12
putative transmembrane protein 183BP, transcript variant X14
putative transmembrane protein 183BP, transcript variant X13
putative transmembrane protein 183BP, transcript variant X2
putative transmembrane protein 183BP, transcript variant X3
putative transmembrane protein 183BP, transcript variant X4
putative transmembrane protein 183BP, transcript variant X6
putative transmembrane protein 183BP, transcript variant X7
putative transmembrane protein 183BP, transcript variant X11
putative transmembrane protein 183BP, transcript variant X8
putative transmembrane protein 183BP, transcript variant X10
putative transmembrane protein 183BP, transcript variant X9
transmembrane protein 183-like isoform X2
transmembrane protein 183A-like isoform X1
putative transmembrane protein 183BP isoform X4
putative transmembrane protein 183BP isoform X3
protein Hook homolog 3-like, transcript variant X1
protein Hook homolog 3-like, transcript variant X2
protein Hook homolog 3-like, transcript variant X3
DNA polymerase eta-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
DNA polymerase eta-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
DNA polymerase eta-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
DNA polymerase eta-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like
ribosome biogenesis protein WDR12 homolog
protein unc-50 homolog, transcript variant X1
protein unc-50 homolog, transcript variant X2
protein unc-50 homolog, transcript variant X4
protein unc-50 homolog, transcript variant X3
beta-1,3-galactosyltransferase 5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
28S ribosomal protein S15, mitochondrial-like, transcript variant X1
28S ribosomal protein S15, mitochondrial-like isoform X1
28S ribosomal protein S15, mitochondrial-like, transcript variant X2
28S ribosomal protein S15, mitochondrial-like isoform X2
mitochondrial DNA helicase-like, transcript variant X2
mitochondrial DNA helicase-like, transcript variant X1
mitochondrial DNA helicase-like, transcript variant X3
glucose-6-phosphate exchanger SLC37A4-like, transcript variant X2
glucose-6-phosphate exchanger SLC37A4-like, transcript variant X1
glucose-6-phosphate exchanger SLC37A4-like isoform X2
glucose-6-phosphate exchanger SLC37A4-like isoform X1
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X5
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X9
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X7
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X2
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X1
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
longitudinals lacking protein, isoforms A/B/D/L-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcription factor GAGA-like isoform X2
longitudinals lacking protein, isoforms A/B/D/L-like isoform X4
longitudinals lacking protein, isoforms A/B/D/L-like isoform X8
transcription factor Ken-like isoform X1
eukaryotic translation initiation factor 2-alpha kinase 3-like, transcript variant X1
eukaryotic translation initiation factor 2-alpha kinase 3-like isoform X1
eukaryotic translation initiation factor 2-alpha kinase 3-like, transcript variant X2
eukaryotic translation initiation factor 2-alpha kinase 3-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
protein tyrosine phosphatase domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
alpha-aspartyl dipeptidase-like, transcript variant X3
alpha-aspartyl dipeptidase-like, transcript variant X2
alpha-aspartyl dipeptidase-like, transcript variant X1
epidermal retinol dehydrogenase 2-like, transcript variant X4
epidermal retinol dehydrogenase 2-like, transcript variant X3
epidermal retinol dehydrogenase 2-like, transcript variant X2
epidermal retinol dehydrogenase 2-like, transcript variant X1
epidermal retinol dehydrogenase 2-like isoform X2
epidermal retinol dehydrogenase 2-like isoform X1
epidermal retinol dehydrogenase 2-like isoform X3
uncharacterized LOC123767912, transcript variant X1
uncharacterized LOC123767912, transcript variant X4
uncharacterized LOC123767912, transcript variant X2
uncharacterized LOC123767912, transcript variant X5
uncharacterized LOC123767912, transcript variant X6
uncharacterized LOC123767912, transcript variant X3
uncharacterized protein LOC123767912 isoform X1
uncharacterized protein LOC123767912 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
glutathione S-transferase C-terminal domain-containing protein homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
glutathione S-transferase C-terminal domain-containing protein homolog, transcript variant X1
glutathione S-transferase C-terminal domain-containing protein homolog isoform X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transmembrane emp24 domain-containing protein eca-like
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X5
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X6
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X3
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X4
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X2
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like, transcript variant X1
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X6
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X5
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X4
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X3
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X2
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X1
major facilitator superfamily domain-containing protein 10-like, transcript variant X2
major facilitator superfamily domain-containing protein 10-like, transcript variant X1
major facilitator superfamily domain-containing protein 10-like
putative inorganic phosphate cotransporter isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized LOC123767922, transcript variant X1
uncharacterized LOC123767922, transcript variant X2
uncharacterized LOC123767922, transcript variant X3
uncharacterized LOC123767922, transcript variant X4
uncharacterized protein LOC123767922 isoform X1
uncharacterized protein LOC123767922 isoform X2
uncharacterized protein LOC123767922 isoform X3
uncharacterized protein LOC123767922 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
novel acetylcholine receptor chaperone-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123767925, transcript variant X1
uncharacterized LOC123767925, transcript variant X2
uncharacterized LOC123767925, transcript variant X3
uncharacterized protein LOC123767925 isoform X1
uncharacterized protein LOC123767925 isoform X2
N-acetyltransferase 9-like, transcript variant X2
N-acetyltransferase 9-like, transcript variant X1
N-acetyltransferase 9-like, transcript variant X4
N-acetyltransferase 9-like, transcript variant X3
serine/threonine-protein kinase mig-15-like, transcript variant X1
serine/threonine-protein kinase mig-15-like, transcript variant X2
serine/threonine-protein kinase mig-15-like, transcript variant X4
serine/threonine-protein kinase mig-15-like, transcript variant X7
serine/threonine-protein kinase mig-15-like, transcript variant X9
serine/threonine-protein kinase mig-15-like, transcript variant X3
serine/threonine-protein kinase mig-15-like, transcript variant X5
serine/threonine-protein kinase mig-15-like, transcript variant X6
serine/threonine-protein kinase mig-15-like, transcript variant X8
serine/threonine-protein kinase mig-15-like, transcript variant X21
serine/threonine-protein kinase mig-15-like, transcript variant X19
serine/threonine-protein kinase mig-15-like, transcript variant X20
serine/threonine-protein kinase mig-15-like isoform X6
serine/threonine-protein kinase mig-15-like isoform X8
serine/threonine-protein kinase mig-15-like isoform X21
serine/threonine-protein kinase mig-15-like isoform X19
serine/threonine-protein kinase mig-15-like isoform X20
serine/threonine-protein kinase mig-15-like, transcript variant X10
serine/threonine-protein kinase mig-15-like, transcript variant X13
serine/threonine-protein kinase mig-15-like, transcript variant X12
serine/threonine-protein kinase mig-15-like, transcript variant X16
serine/threonine-protein kinase mig-15-like, transcript variant X18
serine/threonine-protein kinase mig-15-like, transcript variant X15
serine/threonine-protein kinase mig-15-like, transcript variant X17
serine/threonine-protein kinase mig-15-like, transcript variant X14
serine/threonine-protein kinase mig-15-like isoform X1
serine/threonine-protein kinase mig-15-like isoform X7
serine/threonine-protein kinase mig-15-like isoform X2
serine/threonine-protein kinase mig-15-like isoform X9
serine/threonine-protein kinase mig-15-like isoform X12
serine/threonine-protein kinase mig-15-like isoform X13
serine/threonine-protein kinase mig-15-like isoform X16
serine/threonine-protein kinase mig-15-like isoform X18
serine/threonine-protein kinase mig-15-like isoform X3
serine/threonine-protein kinase mig-15-like isoform X10
traf2 and NCK-interacting protein kinase-like isoform X14
traf2 and NCK-interacting protein kinase-like isoform X15
serine/threonine-protein kinase mig-15-like isoform X17
serine/threonine-protein kinase mig-15-like isoform X4
serine/threonine-protein kinase mig-15-like isoform X5
serine/threonine-protein kinase mig-15-like, transcript variant X11
mitogen-activated protein kinase kinase kinase kinase 4-like isoform X11
cyclin-dependent kinases regulatory subunit 1-like
ATP-dependent zinc metalloprotease YME1L-like
vesicle transport through interaction with t-SNAREs homolog 1A-like
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X3
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X13
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X5
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X8
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X1
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X2
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X4
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X6
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X12
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X7
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X9
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X14
RNA-binding protein, mRNA-processing factor 2a-like isoform X10
RNA-binding protein, mRNA-processing factor 2a-like isoform X7
U1 small nuclear ribonucleoprotein A-like isoform X2
RNA-binding protein, mRNA-processing factor 2a-like isoform X6
U1 small nuclear ribonucleoprotein A-like isoform X3
U1 small nuclear ribonucleoprotein A-like isoform X1
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
RNA-binding protein, mRNA-processing factor 2a-like, transcript variant X10
uncharacterized protein LOC123767931 isoform X11
uncharacterized protein LOC123767931 isoform X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
prostaglandin E2 receptor EP4 subtype-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
prostaglandin E2 receptor EP4 subtype-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
prostaglandin E2 receptor EP4 subtype-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
prostaglandin E2 receptor EP4 subtype-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
prostaglandin E2 receptor EP4 subtype-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
dedicator of cytokinesis protein 1-like, transcript variant X1
dedicator of cytokinesis protein 1-like, transcript variant X2
dedicator of cytokinesis protein 1-like, transcript variant X4
dedicator of cytokinesis protein 1-like, transcript variant X3
dedicator of cytokinesis protein 1-like, transcript variant X5
dedicator of cytokinesis protein 1-like isoform X1
dedicator of cytokinesis protein 1-like isoform X2
dedicator of cytokinesis protein 1-like isoform X4
dedicator of cytokinesis protein 1-like isoform X3
dedicator of cytokinesis protein 1-like isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
serine-aspartate repeat-containing protein I-like
similar to RNA sequence (same species):INSD:GARH01004731.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 222 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 222 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:GBEV01021263.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 703 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 521 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
delta(7)-sterol 5(6)-desaturase erg32-like
general transcription factor IIE subunit 1-like
inhibitor of growth protein 5-like, transcript variant X4
inhibitor of growth protein 5-like, transcript variant X5
inhibitor of growth protein 5-like, transcript variant X3
inhibitor of growth protein 5-like, transcript variant X1
inhibitor of growth protein 5-like, transcript variant X2
inhibitor of growth protein 4-like isoform X4
inhibitor of growth protein 4-like isoform X5
inhibitor of growth protein 5-like isoform X3
inhibitor of growth protein 5-like isoform X2
inhibitor of growth protein 5-like isoform X1
3-hydroxybutyrate dehydrogenase type 2-like
sodium-coupled monocarboxylate transporter 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
sodium-coupled monocarboxylate transporter 1-like, transcript variant X6
sodium-coupled monocarboxylate transporter 1-like, transcript variant X5
sodium-coupled monocarboxylate transporter 1-like isoform X3
sodium-coupled monocarboxylate transporter 1-like isoform X2
sodium-coupled monocarboxylate transporter 1-like, transcript variant X1
sodium-coupled monocarboxylate transporter 1-like, transcript variant X2
sodium-coupled monocarboxylate transporter 1-like, transcript variant X4
sodium-coupled monocarboxylate transporter 1-like, transcript variant X3
sodium-coupled monocarboxylate transporter 1-like isoform X1
fat-like cadherin-related tumor suppressor homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
armadillo repeat-containing protein 7-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
armadillo repeat-containing protein 7-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
armadillo repeat-containing protein 7-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
armadillo repeat-containing protein 7-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
armadillo repeat-containing protein 7-like isoform X4
armadillo repeat-containing protein 7-like isoform X3
armadillo repeat-containing protein 7-like isoform X1
armadillo repeat-containing protein 7-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
armadillo repeat-containing protein 7-like isoform X2
ubiquitin thioesterase OTU1-like, transcript variant X5
ubiquitin thioesterase OTU1-like, transcript variant X1
ubiquitin thioesterase OTU1-like, transcript variant X2
ubiquitin thioesterase OTU1-like, transcript variant X4
ubiquitin thioesterase OTU1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
brain tumor protein-like, transcript variant X1
brain tumor protein-like, transcript variant X2
keratin, high-sulfur matrix protein, B2D-like
uncharacterized transmembrane protein DDB_G0289901-like
transfer RNA proline (anticodon CGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
histone-lysine N-methyltransferase 2D-like
similar to RNA sequence (same species):INSD:GARH01004275.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 278 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 278 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123767957, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123767957, transcript variant X2
uncharacterized LOC123767957, transcript variant X3
uncharacterized protein LOC123767957 isoform X1
uncharacterized protein LOC123767957 isoform X2
uncharacterized protein LOC123767957 isoform X3
similar to RNA sequence (same species):INSD:GBEV01054883.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1093 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 465 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
induced during hyphae development protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52% coverage of the annotated genomic feature by RNAseq alignments
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
tigger transposable element-derived protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123767961, transcript variant X2
uncharacterized LOC123767961, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123767961, transcript variant X3
glycine-rich cell wall structural protein 2-like
proline-rich receptor-like protein kinase PERK9
uncharacterized PPE family protein PPE24-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
serine/threonine-protein kinase RIO1-like
guanine nucleotide-binding protein G(i) subunit alpha
cyclin-dependent kinase 12-like, transcript variant X1
similar to RNA sequence (same species):INSD:GBEV01007078.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 921 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
cyclin-dependent kinase 12-like, transcript variant X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 921 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 188 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
CD151 antigen-like, transcript variant X1
CD151 antigen-like, transcript variant X4
CD151 antigen-like, transcript variant X3
CD151 antigen-like, transcript variant X2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like
uncharacterized LOC123767966, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized protein LOC123767966 isoform X3
uncharacterized LOC123767966, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123767966, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
uncharacterized protein LOC123767966 isoform X2
uncharacterized protein LOC123767966 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
uncharacterized histidine-rich protein DDB_G0274557-like
basic salivary proline-rich protein 2-like
sulfotransferase 1C4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
sulfotransferase 1C4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
sulfotransferase 1C4-like, transcript variant X3
sulfotransferase 1C4-like, transcript variant X4
transmembrane protein 254-like, transcript variant X2
transmembrane protein 254-like, transcript variant X1
transmembrane protein 254-like, transcript variant X3
acyl-coenzyme A thioesterase 13-like, transcript variant X5
acyl-coenzyme A thioesterase 13-like, transcript variant X1
acyl-coenzyme A thioesterase 13-like, transcript variant X3
acyl-coenzyme A thioesterase 13-like, transcript variant X4
acyl-coenzyme A thioesterase 13-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
protein split ends-like, transcript variant X1
protein split ends-like, transcript variant X2
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X6
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
guanine nucleotide-binding protein subunit beta-like protein 1 isoform X2
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like, transcript variant X2
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like isoform X1
breast cancer type 2 susceptibility protein-like, transcript variant X2
breast cancer type 2 susceptibility protein-like, transcript variant X1
breast cancer type 2 susceptibility protein-like
cadherin EGF LAG seven-pass G-type receptor 2-like
uncharacterized LOC123767978, transcript variant X1
uncharacterized LOC123767978, transcript variant X4
uncharacterized LOC123767978, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123767978, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123767978, transcript variant X2
uncharacterized protein LOC123767978 isoform X1
uncharacterized protein LOC123767978 isoform X4
uncharacterized protein LOC123767978 isoform X5
uncharacterized protein LOC123767978 isoform X3
uncharacterized protein LOC123767978 isoform X2
uncharacterized LOC123767978, transcript variant X6
uncharacterized protein LOC123767978 isoform X6
succinate-semialdehyde dehydrogenase, mitochondrial-like, transcript variant X1
succinate-semialdehyde dehydrogenase, mitochondrial-like isoform X1
succinate-semialdehyde dehydrogenase, mitochondrial-like, transcript variant X2
succinate-semialdehyde dehydrogenase, mitochondrial-like, transcript variant X3
succinate-semialdehyde dehydrogenase, mitochondrial-like, transcript variant X4
succinate-semialdehyde dehydrogenase, mitochondrial-like isoform X2
electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like
uncharacterized LOC123767981, transcript variant X1
uncharacterized LOC123767981, transcript variant X2
uncharacterized LOC123767981, transcript variant X4
uncharacterized LOC123767981, transcript variant X3
uncharacterized protein LOC123767981 isoform X1
uncharacterized protein LOC123767981 isoform X2