Procambarus clarkii strain Jiangsu linkage group LG49, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035521.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S5, mitochondrial-like
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
abscisic acid and environmental stress-inducible protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
glutamate receptor ionotropic, kainate glr-3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized LOC123767060, transcript variant X2
uncharacterized LOC123767060, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC123767061 isoform X1
probable protein phosphatase 2C T23F11.1, transcript variant X1
probable protein phosphatase 2C T23F11.1, transcript variant X2
probable protein phosphatase 2C T23F11.1 isoform X2
probable protein phosphatase 2C T23F11.1 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
cytochrome P450 2L1-like, transcript variant X2
cytochrome P450 2L1-like, transcript variant X1
probable serine/threonine-protein kinase clkA
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
centromere-associated protein E-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
centromere-associated protein E-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
uncharacterized protein LOC123767066 isoform X2
centromere-associated protein E-like isoform X1
methyltransferase-like protein 22, transcript variant X1
methyltransferase-like protein 22, transcript variant X3
methyltransferase-like protein 22, transcript variant X4
methyltransferase-like protein 22, transcript variant X2
methyltransferase-like protein 22 isoform X4
methyltransferase-like protein 22 isoform X3
methyltransferase-like protein 22 isoform X2
methyltransferase-like protein 22 isoform X1
E3 ubiquitin-protein ligase hyd-like, transcript variant X2
E3 ubiquitin-protein ligase hyd-like, transcript variant X3
E3 ubiquitin-protein ligase hyd-like, transcript variant X1
E3 ubiquitin-protein ligase hyd-like isoform X2
E3 ubiquitin-protein ligase hyd-like isoform X3
E3 ubiquitin-protein ligase hyd-like isoform X1
E3 ubiquitin-protein ligase hyd-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
E3 ubiquitin-protein ligase hyd-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
N-alpha-acetyltransferase 38-B, NatC auxiliary subunit-like, transcript variant X2
N-alpha-acetyltransferase 38-B, NatC auxiliary subunit-like, transcript variant X1
N-alpha-acetyltransferase 38-B, NatC auxiliary subunit-like, transcript variant X3
N-alpha-acetyltransferase 38-B, NatC auxiliary subunit-like, transcript variant X4
uncharacterized protein LOC123767071 isoform X2
N-alpha-acetyltransferase 38-A, NatC auxiliary subunit-like isoform X1
N-alpha-acetyltransferase 38-B, NatC auxiliary subunit-like isoform X3
uncharacterized LOC123767072, transcript variant X2
uncharacterized LOC123767072, transcript variant X1
uncharacterized protein LOC123767072 isoform X2
uncharacterized protein LOC123767072 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
zinc finger protein ubi-d4-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger protein ubi-d4-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
zinc finger protein ubi-d4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zinc finger protein ubi-d4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zinc finger protein ubi-d4-like isoform X3
zinc finger protein ubi-d4 B-like isoform X4
zinc finger protein ubi-d4 B-like isoform X2
zinc finger protein ubi-d4-like isoform X1
PEST proteolytic signal-containing nuclear protein-like, transcript variant X2
PEST proteolytic signal-containing nuclear protein-like, transcript variant X1
PEST proteolytic signal-containing nuclear protein-like isoform X1
PEST proteolytic signal-containing nuclear protein-like isoform X2
PEST proteolytic signal-containing nuclear protein-like, transcript variant X3
PEST proteolytic signal-containing nuclear protein-like, transcript variant X4
PEST proteolytic signal-containing nuclear protein-like isoform X3
PEST proteolytic signal-containing nuclear protein-like isoform X4
heart- and neural crest derivatives-expressed protein 1-like
leucine-rich repeat extensin-like protein 5
heart- and neural crest derivatives-expressed protein 2-like
WD repeat-containing protein 37-like, transcript variant X1
WD repeat-containing protein 37-like, transcript variant X2
similar to RNA sequence (same species):INSD:GBEV01013305.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 363 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 149 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123767082, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123767082, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
uncharacterized protein LOC123767082 isoform X2
uncharacterized protein LOC123767082 isoform X1
inosine-uridine preferring nucleoside hydrolase-like, transcript variant X3
inosine-uridine preferring nucleoside hydrolase-like, transcript variant X1
inosine-uridine preferring nucleoside hydrolase-like, transcript variant X2
inosine-uridine preferring nucleoside hydrolase-like isoform X2
inosine-uridine preferring nucleoside hydrolase-like isoform X1
cholinephosphotransferase 1-like, transcript variant X8
cholinephosphotransferase 1-like, transcript variant X7
cholinephosphotransferase 1-like, transcript variant X4
cholinephosphotransferase 1-like, transcript variant X6
cholinephosphotransferase 1-like, transcript variant X3
cholinephosphotransferase 1-like, transcript variant X2
cholinephosphotransferase 1-like, transcript variant X1
cholinephosphotransferase 1-like, transcript variant X5
choline/ethanolaminephosphotransferase 1-like isoform X8
choline/ethanolaminephosphotransferase 1-like isoform X7
cholinephosphotransferase 1-like isoform X4
cholinephosphotransferase 1-like isoform X6
cholinephosphotransferase 1-like isoform X3
cholinephosphotransferase 1-like isoform X2
cholinephosphotransferase 1-like isoform X1
cholinephosphotransferase 1-like isoform X5
uncharacterized LOC123767087, transcript variant X2
uncharacterized LOC123767087, transcript variant X1
uncharacterized LOC123767087, transcript variant X3
uncharacterized LOC123767087, transcript variant X4
uncharacterized protein LOC123767087 isoform X1
uncharacterized protein LOC123767087 isoform X2
uncharacterized protein LOC123767087 isoform X3
corticotropin-releasing factor receptor 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
sulfate anion transporter 1-like, transcript variant X1
similar to RNA sequence (same species):INSD:GBEV01215974.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 224 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
sulfate anion transporter 1-like, transcript variant X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 224 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 56 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
sulfate anion transporter 1-like isoform X1
adenylyl cyclase-associated protein 1-like, transcript variant X7
adenylyl cyclase-associated protein 1-like, transcript variant X6
histone-lysine N-methyltransferase, H3 lysine-79 specific-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
adenylyl cyclase-associated protein 1-like, transcript variant X5
adenylyl cyclase-associated protein 1-like isoform X5
adenylyl cyclase-associated protein 1-like, transcript variant X1
adenylyl cyclase-associated protein 1-like, transcript variant X3
adenylyl cyclase-associated protein 1-like, transcript variant X2
adenylyl cyclase-associated protein 1-like, transcript variant X4
adenylyl cyclase-associated protein 1-like isoform X1
adenylyl cyclase-associated protein 1-like isoform X3
adenylyl cyclase-associated protein 1-like isoform X2
adenylyl cyclase-associated protein 1-like isoform X4
adenylyl cyclase-associated protein 1-like isoform X6
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like, transcript variant X3
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like, transcript variant X2
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like, transcript variant X1
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
armadillo repeat-containing protein 6-like, transcript variant X1
armadillo repeat-containing protein 6-like, transcript variant X2
armadillo repeat-containing protein 6-like isoform X1
armadillo repeat-containing protein 6-like isoform X2
sperm protein associated with the nucleus on the X chromosome N2-like
thioredoxin domain-containing protein 2-like
elongin BC and Polycomb repressive complex 2-associated protein-like
uncharacterized protein DKFZp434B061-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 26% coverage of the annotated genomic feature by RNAseq alignments
protein O-mannosyl-transferase TMTC4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
ESX-1 secretion-associated protein EspK-like
protein O-mannosyl-transferase TMTC1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial translation release factor in rescue-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123767100, transcript variant X2
uncharacterized LOC123767100, transcript variant X1
uncharacterized LOC123767100, transcript variant X3
uncharacterized LOC123767100, transcript variant X4
uncharacterized LOC123767100, transcript variant X5
importin subunit alpha-7-like, transcript variant X2
importin subunit alpha-7-like, transcript variant X1
importin subunit alpha-7-like isoform X1
importin subunit alpha-7-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized membrane protein YFL067W-like
uncharacterized protein DDB_G0290685-like
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
glycine-rich cell wall structural protein 1.0-like
similar to RNA sequence (same species):INSD:GBEV01054102.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 490 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 263 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
cysteine-rich, acidic integral membrane protein-like, transcript variant X2
cysteine-rich, acidic integral membrane protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
cysteine-rich, acidic integral membrane protein-like
rhomboid-related protein 2-like, transcript variant X1
rhomboid-related protein 2-like, transcript variant X2
rhomboid-related protein 3-like isoform X1
uncharacterized protein LOC123767106 isoform X2
rhomboid-related protein 2-like, transcript variant X3
rhomboid-related protein 2-like isoform X3
tetra-peptide repeat homeobox protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
uncharacterized LOC123767108, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized LOC123767108, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC123767108, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123767108, transcript variant X5
uncharacterized LOC123767108, transcript variant X2
uncharacterized protein LOC123767108 isoform X1
uncharacterized protein LOC123767108 isoform X3
uncharacterized protein LOC123767108 isoform X4
uncharacterized protein LOC123767108 isoform X5
uncharacterized protein LOC123767108 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123767114, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123767114, transcript variant X1
uncharacterized protein LOC123767114 isoform X2
uncharacterized protein LOC123767114 isoform X1
uncharacterized LOC123767113, transcript variant X1
uncharacterized LOC123767113, transcript variant X2
uncharacterized protein LOC123767113 isoform X1
uncharacterized protein LOC123767113 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
glucocorticoid-induced transcript 1 protein-like, transcript variant X1
glucocorticoid-induced transcript 1 protein-like, transcript variant X3
glucocorticoid-induced transcript 1 protein-like, transcript variant X2
glucocorticoid-induced transcript 1 protein-like, transcript variant X4
glucocorticoid-induced transcript 1 protein-like isoform X1
glucocorticoid-induced transcript 1 protein-like isoform X2
protein DBF4 homolog B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein DBF4 homolog B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
protein piccolo-like, transcript variant X1
protein piccolo-like, transcript variant X2
nucleoside diphosphate kinase 6-like, transcript variant X3
nucleoside diphosphate kinase 6-like, transcript variant X4
nucleoside diphosphate kinase 6-like, transcript variant X1
nucleoside diphosphate kinase 6-like, transcript variant X5
nucleoside diphosphate kinase 6-like, transcript variant X2
nucleoside diphosphate kinase 6-like isoform X1
nucleoside diphosphate kinase 6-like isoform X3
nucleoside diphosphate kinase 6-like isoform X2
4-trimethylaminobutyraldehyde dehydrogenase-like, transcript variant X1
4-trimethylaminobutyraldehyde dehydrogenase-like, transcript variant X2
4-trimethylaminobutyraldehyde dehydrogenase-like isoform X1
4-trimethylaminobutyraldehyde dehydrogenase-like isoform X2
protein IWS1 homolog, transcript variant X1
protein IWS1 homolog, transcript variant X4
protein IWS1 homolog, transcript variant X2
protein IWS1 homolog, transcript variant X3
MBT domain-containing protein 1-like, transcript variant X4
MBT domain-containing protein 1-like, transcript variant X3
MBT domain-containing protein 1-like, transcript variant X2
MBT domain-containing protein 1-like, transcript variant X6
MBT domain-containing protein 1-like, transcript variant X7
MBT domain-containing protein 1-like, transcript variant X1
MBT domain-containing protein 1-like, transcript variant X5
MBT domain-containing protein 1-like isoform X4
MBT domain-containing protein 1-like isoform X3
MBT domain-containing protein 1-like isoform X2
MBT domain-containing protein 1-like isoform X6
MBT domain-containing protein 1-like isoform X7
MBT domain-containing protein 1-like isoform X1
MBT domain-containing protein 1-like isoform X5
DNA-directed RNA polymerase II subunit RPB7, transcript variant X2
DNA-directed RNA polymerase II subunit RPB7, transcript variant X1
DNA-directed RNA polymerase II subunit RPB7 isoform X1
DNA-directed RNA polymerase II subunit RPB7 isoform X2
60S ribosomal protein L29-1-like, transcript variant X1
60S ribosomal protein L29-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123767134, transcript variant X2
uncharacterized LOC123767134, transcript variant X1
uncharacterized protein LOC123767134 isoform X2
uncharacterized protein LOC123767134 isoform X1
uncharacterized LOC123767136, transcript variant X1
uncharacterized LOC123767136, transcript variant X3
uncharacterized LOC123767136, transcript variant X2
uncharacterized protein LOC123767136 isoform X1
uncharacterized protein LOC123767136 isoform X3
uncharacterized protein LOC123767136 isoform X2
eukaryotic translation initiation factor 4E type 2-like, transcript variant X2
eukaryotic translation initiation factor 4E type 2-like, transcript variant X1
eukaryotic translation initiation factor 4E type 2-like
CTP synthase 1-like, transcript variant X1
CTP synthase 1-like, transcript variant X2
acetylcholine receptor subunit beta-like 1, transcript variant X2
acetylcholine receptor subunit beta-like 1, transcript variant X1
acetylcholine receptor subunit beta-like 1, transcript variant X3
acetylcholine receptor subunit beta-like 1 isoform X2
acetylcholine receptor subunit beta-like 1 isoform X1
acetylcholine receptor subunit beta-like 1 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
neuronal acetylcholine receptor subunit alpha-7-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
neuronal acetylcholine receptor subunit alpha-7-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
neuronal acetylcholine receptor subunit alpha-7-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
neuronal acetylcholine receptor subunit alpha-7-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
neuronal acetylcholine receptor subunit alpha-7-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
neuronal acetylcholine receptor subunit alpha-7-like isoform X5
neuronal acetylcholine receptor subunit alpha-7-like isoform X3
neuronal acetylcholine receptor subunit alpha-7-like isoform X4
neuronal acetylcholine receptor subunit alpha-7-like isoform X1
neuronal acetylcholine receptor subunit alpha-7-like isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
ABC transporter G family member 9-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ABC transporter G family member 9-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ABC transporter G family member 9-like, transcript variant X3
golgin subfamily A member 6-like protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
venom allergen 5-like, transcript variant X2
venom allergen 5-like, transcript variant X1
neuronal acetylcholine receptor subunit alpha-7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
angiopoietin-2-like, transcript variant X2
angiopoietin-2-like, transcript variant X1
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
bifunctional glutamate/proline--tRNA ligase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ras-related protein Rab6, transcript variant X1
ras-related protein Rab6, transcript variant X3
ras-related protein Rab6, transcript variant X4
ras-related protein Rab6, transcript variant X2
uncharacterized LOC123767155, transcript variant X2
uncharacterized LOC123767155, transcript variant X7
uncharacterized LOC123767155, transcript variant X8
uncharacterized LOC123767155, transcript variant X3
uncharacterized LOC123767155, transcript variant X1
uncharacterized LOC123767155, transcript variant X9
uncharacterized LOC123767155, transcript variant X4
cytadherence high molecular weight protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
uncharacterized LOC123767155, transcript variant X6
uncharacterized LOC123767155, transcript variant X5
ring-infected erythrocyte surface antigen-like
ankyrin repeat domain-containing protein 16-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
ankyrin repeat domain-containing protein 16-like, transcript variant X2
ankyrin repeat domain-containing protein 16-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
ankyrin repeat domain-containing protein 16-like
long-chain-fatty-acid--CoA ligase ACSBG2-like, transcript variant X4
long-chain-fatty-acid--CoA ligase ACSBG2-like, transcript variant X1
long-chain-fatty-acid--CoA ligase ACSBG2-like, transcript variant X3
long-chain-fatty-acid--CoA ligase ACSBG2-like, transcript variant X2
long-chain-fatty-acid--CoA ligase ACSBG2-like, transcript variant X5
long-chain-fatty-acid--CoA ligase ACSBG2-like
uncharacterized LOC123767157, transcript variant X1
uncharacterized LOC123767157, transcript variant X2
uncharacterized LOC123767157, transcript variant X3
uncharacterized protein LOC123767157 isoform X1
uncharacterized protein LOC123767157 isoform X3
uncharacterized protein LOC123767157 isoform X2
calcium-binding protein P-like, transcript variant X4
calcium-binding protein P-like, transcript variant X3
calcium-binding protein P-like, transcript variant X2
calcium-binding protein P-like, transcript variant X1
DNA-directed RNA polymerase II subunit RPB1-like isoform X3
calcium-binding protein P-like isoform X2
calcium-binding protein P-like isoform X1
rho family-interacting cell polarization regulator 1-like
carbohydrate sulfotransferase 1-like, transcript variant X3
carbohydrate sulfotransferase 1-like, transcript variant X2
carbohydrate sulfotransferase 1-like, transcript variant X1
sulfate anion transporter 1-like, transcript variant X4
sulfate anion transporter 1-like, transcript variant X3
sulfate anion transporter 1-like isoform X2
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X3
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X6
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X4
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X8
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X5
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X7
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X1
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like, transcript variant X2
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X3
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X5
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X4
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X6
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X2
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X1
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X7
uncharacterized LOC123767169, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123767169, transcript variant X1
uncharacterized LOC123767169, transcript variant X2
uncharacterized LOC123767169, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
uncharacterized protein LOC123767169 isoform X2
uncharacterized protein LOC123767169 isoform X1
nucleoporin p58/p45-like, transcript variant X5
nucleoporin p58/p45-like, transcript variant X2
nucleoporin p58/p45-like, transcript variant X1
nucleoporin p58/p45-like, transcript variant X4
nucleoporin p58/p45-like, transcript variant X3
abl interactor 2-like, transcript variant X3
abl interactor 2-like, transcript variant X1
abl interactor 2-like, transcript variant X2
transcription factor 21-like, transcript variant X1
transcription factor 21-like, transcript variant X2
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like, transcript variant X1
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like, transcript variant X2
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like isoform X1
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like isoform X2