Procambarus clarkii strain Jiangsu linkage group LG33, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035505.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized transmembrane protein DDB_G0289901-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
probable ATP-dependent RNA helicase DDX23
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
tigger transposable element-derived protein 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like
39S ribosomal protein L54, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
claw keratin-like, transcript variant X1
claw keratin-like, transcript variant X2
transcription initiation factor TFIID subunit 12-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123762451, transcript variant X1
uncharacterized LOC123762451, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GBEV01106250.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 659 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 639 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123762453, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
uncharacterized LOC123762453, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
uncharacterized protein LOC123762453 isoform X1
uncharacterized protein LOC123762453 isoform X2
serine/threonine-protein kinase A-Raf-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
zinc finger and SCAN domain-containing protein 12-like
putative uncharacterized protein DDB_G0290521
uncharacterized LOC123762228, transcript variant X2
uncharacterized LOC123762228, transcript variant X1
uncharacterized protein LOC123762228 isoform X1
uncharacterized protein LOC123762228 isoform X2
golgin subfamily A member 6-like protein 7
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
breast cancer anti-estrogen resistance protein 1-like, transcript variant X2
breast cancer anti-estrogen resistance protein 1-like, transcript variant X1
breast cancer anti-estrogen resistance protein 1-like isoform X2
breast cancer anti-estrogen resistance protein 1-like isoform X1
DNA-directed RNA polymerase III subunit RPC8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
cytochrome P450 3A21-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
cytochrome P450 3A21-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
cytochrome P450 3A21-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
cytochrome P450 3A21-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
cell division cycle protein 123 homolog, transcript variant X1
cell division cycle protein 123 homolog, transcript variant X2
cell division cycle protein 123 homolog isoform X1
cell division cycle protein 123 homolog isoform X2
neural-cadherin-like, transcript variant X2
neural-cadherin-like, transcript variant X6
neural-cadherin-like, transcript variant X7
neural-cadherin-like, transcript variant X4
neural-cadherin-like, transcript variant X1
neural-cadherin-like, transcript variant X5
neural-cadherin-like, transcript variant X3
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like, transcript variant X3
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like, transcript variant X1
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X3
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like, transcript variant X2
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X2
glutamine amidotransferase-like class 1 domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123762237, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC123762237, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123762237, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123762237, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
ras-related protein Rab-30-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ras-related protein Rab-30-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ras-related protein Rab-30-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
ras-related protein Rab-30-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ras-related protein Rab-30-like isoform X2
ras-related protein Rab-30-like isoform X1
ras-related protein Rab-30-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
lysine-rich arabinogalactan protein 19-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123762243, transcript variant X1
uncharacterized LOC123762243, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123762242, transcript variant X3
uncharacterized LOC123762242, transcript variant X1
uncharacterized LOC123762242, transcript variant X2
uncharacterized protein LOC123762242 isoform X1
uncharacterized protein LOC123762242 isoform X2
transcription factor E2F4-like, transcript variant X1
transcription factor E2F4-like, transcript variant X2
glutenin, high molecular weight subunit PW212-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
probable tubulin polyglutamylase ttll-15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A-like
calcium-binding and coiled-coil domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial, transcript variant X1
probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
glutenin, high molecular weight subunit DY10-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
uncharacterized protein DDB_G0271670-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
ornithine decarboxylase-like, transcript variant X2
ornithine decarboxylase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
uncharacterized LOC123762253, transcript variant X2
uncharacterized LOC123762253, transcript variant X1
uncharacterized protein LOC123762253 isoform X1
uncharacterized protein LOC123762253 isoform X2
carbohydrate sulfotransferase 11-like, transcript variant X1
carbohydrate sulfotransferase 11-like, transcript variant X3
carbohydrate sulfotransferase 11-like, transcript variant X2
carbohydrate sulfotransferase 11-like, transcript variant X4
carbohydrate sulfotransferase 11-like isoform X1
carbohydrate sulfotransferase 11-like isoform X4
carbohydrate sulfotransferase 11-like, transcript variant X5
carbohydrate sulfotransferase 11-like isoform X2
carbohydrate sulfotransferase 11-like isoform X5
carbohydrate sulfotransferase 11-like, transcript variant X6
carbohydrate sulfotransferase 11-like isoform X3
carbohydrate sulfotransferase 11-like isoform X6
myotubularin-related protein 13-like, transcript variant X1
myotubularin-related protein 13-like, transcript variant X2
myotubularin-related protein 13-like, transcript variant X5
myotubularin-related protein 13-like, transcript variant X4
myotubularin-related protein 13-like, transcript variant X3
myotubularin-related protein 13-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
myotubularin-related protein 13-like, transcript variant X7
myotubularin-related protein 5-like isoform X1
myotubularin-related protein 5-like isoform X2
myotubularin-related protein 5-like isoform X5
myotubularin-related protein 13-like isoform X4
myotubularin-related protein 5-like isoform X3
myotubularin-related protein 5-like isoform X6
uncharacterized LOC123762265, transcript variant X2
uncharacterized LOC123762265, transcript variant X1
facilitated trehalose transporter Tret1-2 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
protein NEDD1-like, transcript variant X1
protein NEDD1-like, transcript variant X2
protein NEDD1-like, transcript variant X3
mitochondrial import inner membrane translocase subunit Tim13-like
AP-1 complex subunit beta-1-like, transcript variant X5
AP-1 complex subunit beta-1-like, transcript variant X2
AP-1 complex subunit beta-1-like, transcript variant X6
AP-1 complex subunit beta-1-like, transcript variant X3
AP-1 complex subunit beta-1-like, transcript variant X4
AP-1 complex subunit beta-1-like, transcript variant X1
AP-1 complex subunit beta-1-like isoform X5
AP-1 complex subunit beta-1-like isoform X2
AP-1 complex subunit beta-1-like isoform X6
AP-1 complex subunit beta-1-like isoform X3
AP-1 complex subunit beta-1-like isoform X4
AP-1 complex subunit beta-1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
U7 snRNA-associated Sm-like protein LSm10, transcript variant X4
U7 snRNA-associated Sm-like protein LSm10, transcript variant X5
U7 snRNA-associated Sm-like protein LSm10, transcript variant X3
U7 snRNA-associated Sm-like protein LSm10, transcript variant X1
U7 snRNA-associated Sm-like protein LSm10, transcript variant X2
U7 snRNA-associated Sm-like protein LSm10
pelle-like serine/threonine-protein kinase pik-1, transcript variant X3
pelle-like serine/threonine-protein kinase pik-1, transcript variant X2
pelle-like serine/threonine-protein kinase pik-1, transcript variant X1
pelle-like serine/threonine-protein kinase pik-1, transcript variant X5
pelle-like serine/threonine-protein kinase pik-1, transcript variant X4
pelle-like serine/threonine-protein kinase pik-1 isoform X4
uncharacterized protein LOC123762272 isoform X2
uncharacterized protein LOC123762272 isoform X1
uncharacterized protein LOC123762272 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
protein Star-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
protein Star-like, transcript variant X2
uncharacterized LOC123762278, transcript variant X2
uncharacterized LOC123762278, transcript variant X1
uncharacterized protein LOC123762278 isoform X2
uncharacterized protein LOC123762278 isoform X1
ERC protein 2-like, transcript variant X1
ERC protein 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123762284, transcript variant X1
uncharacterized LOC123762284, transcript variant X2
uncharacterized protein LOC123762284 isoform X2
uncharacterized protein LOC123762284 isoform X1
uncharacterized LOC123762286, transcript variant X3
uncharacterized LOC123762286, transcript variant X2
uncharacterized LOC123762286, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
facilitated trehalose transporter Tret1-like
glucose dehydrogenase [FAD, quinone]-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123762292, transcript variant X2
uncharacterized LOC123762292, transcript variant X1
uncharacterized LOC123762292, transcript variant X3
peptidyl-prolyl cis-trans isomerase FKBP8-like, transcript variant X1
peptidyl-prolyl cis-trans isomerase FKBP8-like, transcript variant X2
peptidyl-prolyl cis-trans isomerase FKBP8-like, transcript variant X3
peptidyl-prolyl cis-trans isomerase FKBP8-like
conserved oligomeric Golgi complex subunit 1-like, transcript variant X2
conserved oligomeric Golgi complex subunit 1-like, transcript variant X1
conserved oligomeric Golgi complex subunit 1-like, transcript variant X3
conserved oligomeric Golgi complex subunit 1-like
uncharacterized LOC123762294, transcript variant X1
uncharacterized LOC123762294, transcript variant X2
uncharacterized protein LOC123762294 isoform X1
uncharacterized protein LOC123762294 isoform X2
superoxide dismutase [Mn], mitochondrial-like
CUE domain-containing protein 1-like, transcript variant X1
CUE domain-containing protein 1-like, transcript variant X2
CUE domain-containing protein 1-like, transcript variant X3
CUE domain-containing protein 1-like isoform X1
uncharacterized protein LOC123762301 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
surfeit locus protein 6 homolog, transcript variant X3
surfeit locus protein 6 homolog, transcript variant X2
surfeit locus protein 6 homolog, transcript variant X1
surfeit locus protein 6 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
FAD-dependent oxidoreductase domain-containing protein 1-like
F-box/LRR-repeat protein fbxl-1-like, transcript variant X1
dynein regulatory complex subunit 6-like isoform X1
F-box/LRR-repeat protein fbxl-1-like, transcript variant X2
F-box/LRR-repeat protein fbxl-1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
uncharacterized LOC123762461, transcript variant X2
uncharacterized LOC123762461, transcript variant X1
similar to RNA sequence (same species):INSD:GBEV01022922.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 494 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 494 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain-containing protein 49-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: kinesin-like protein KIN-14I
vesicle transport protein SFT2A-like, transcript variant X3
vesicle transport protein SFT2A-like, transcript variant X8
vesicle transport protein SFT2A-like, transcript variant X1
vesicle transport protein SFT2A-like, transcript variant X5
vesicle transport protein SFT2A-like, transcript variant X4
vesicle transport protein SFT2A-like, transcript variant X7
vesicle transport protein SFT2A-like, transcript variant X2
vesicle transport protein SFT2A-like, transcript variant X6
vesicle transport protein SFT2A-like isoform X1
vesicle transport protein SFT2A-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
coiled-coil domain-containing protein 85A-like
potassium voltage-gated channel protein Shaw-like
uncharacterized LOC123762319, transcript variant X3
uncharacterized LOC123762319, transcript variant X1
uncharacterized LOC123762319, transcript variant X2
similar to RNA sequence (same species):INSD:GBEV01107029.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 60 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 60 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123762324, transcript variant X1
uncharacterized LOC123762324, transcript variant X5
uncharacterized LOC123762324, transcript variant X6
uncharacterized LOC123762324, transcript variant X2
uncharacterized LOC123762324, transcript variant X4
uncharacterized LOC123762324, transcript variant X3
uncharacterized protein LOC123762324 isoform X1
uncharacterized protein LOC123762324 isoform X2
kelch-like protein diablo, transcript variant X1
kelch-like protein diablo, transcript variant X2
splicing regulatory glutamine/lysine-rich protein 1-like, transcript variant X2
splicing regulatory glutamine/lysine-rich protein 1-like, transcript variant X1
splicing regulatory glutamine/lysine-rich protein 1-like, transcript variant X4
splicing regulatory glutamine/lysine-rich protein 1-like, transcript variant X3
splicing regulatory glutamine/lysine-rich protein 1-like isoform X1
splicing regulatory glutamine/lysine-rich protein 1-like isoform X3
splicing regulatory glutamine/lysine-rich protein 1-like isoform X2
splicing regulatory glutamine/lysine-rich protein 1-like isoform X4
cysteine and glycine-rich protein 1-like, transcript variant X1
cysteine and glycine-rich protein 1-like, transcript variant X2
cysteine and glycine-rich protein 1-like isoform X1
cysteine and glycine-rich protein 1-like isoform X2
co-chaperone protein daf-41-like, transcript variant X2
co-chaperone protein daf-41-like isoform X2
co-chaperone protein daf-41-like, transcript variant X1
prostaglandin E synthase 3-like isoform X1
tyrosine-protein phosphatase non-receptor type 23-like
glycerol-3-phosphate acyltransferase 1, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
glycerol-3-phosphate acyltransferase 1, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
glycerol-3-phosphate acyltransferase 1, mitochondrial-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
glycerol-3-phosphate acyltransferase 1, mitochondrial-like isoform X1
glycerol-3-phosphate acyltransferase 1, mitochondrial-like isoform X2
zinc finger protein 37-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
zinc finger protein 37-like, transcript variant X5
zinc finger protein 37-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
zinc finger protein 37-like, transcript variant X4
zinc finger protein 37-like, transcript variant X6
zinc finger protein 37-like, transcript variant X2
zinc finger protein 37-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
similar to RNA sequence (same species):INSD:GBEV01021746.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
marginal zone B- and B1-cell-specific protein-like, transcript variant X2
marginal zone B- and B1-cell-specific protein-like, transcript variant X1
marginal zone B- and B1-cell-specific protein-like isoform X1
marginal zone B- and B1-cell-specific protein-like isoform X2
uncharacterized LOC123762341, transcript variant X1
uncharacterized LOC123762341, transcript variant X3
uncharacterized LOC123762341, transcript variant X2
uncharacterized LOC123762341, transcript variant X4
ribitol-5-phosphate xylosyltransferase 1-like, transcript variant X3
ribitol-5-phosphate xylosyltransferase 1-like isoform X3
ribitol-5-phosphate xylosyltransferase 1-like, transcript variant X4
ribitol-5-phosphate xylosyltransferase 1-like, transcript variant X1
ribitol-5-phosphate xylosyltransferase 1-like, transcript variant X2
ribitol-5-phosphate xylosyltransferase 1-like isoform X1
ribitol-5-phosphate xylosyltransferase 1-like isoform X2
ribitol-5-phosphate xylosyltransferase 1-like isoform X4
uncharacterized LOC123762343, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123762343, transcript variant X2
protein lin-10-like, transcript variant X1
protein lin-10-like, transcript variant X2
protein lin-10-like, transcript variant X3
protein lin-10-like, transcript variant X4
protein lin-10-like, transcript variant X5
protein lin-10-like, transcript variant X8
protein lin-10-like, transcript variant X10
protein lin-10-like, transcript variant X6
protein lin-10-like, transcript variant X9
protein lin-10-like, transcript variant X7
protein lin-10-like, transcript variant X14
protein lin-10-like, transcript variant X13
protein lin-10-like, transcript variant X11
protein lin-10-like, transcript variant X12
eukaryotic peptide chain release factor subunit 1, transcript variant X6
eukaryotic peptide chain release factor subunit 1, transcript variant X9
eukaryotic peptide chain release factor subunit 1, transcript variant X8
eukaryotic peptide chain release factor subunit 1, transcript variant X7
eukaryotic peptide chain release factor subunit 1, transcript variant X1
eukaryotic peptide chain release factor subunit 1, transcript variant X2
eukaryotic peptide chain release factor subunit 1, transcript variant X3
eukaryotic peptide chain release factor subunit 1, transcript variant X4
eukaryotic peptide chain release factor subunit 1, transcript variant X5
eukaryotic peptide chain release factor subunit 1 isoform X4
eukaryotic peptide chain release factor subunit 1 isoform X2
eukaryotic peptide chain release factor subunit 1 isoform X3
eukaryotic peptide chain release factor subunit 1 isoform X1
ubiquitin carboxyl-terminal hydrolase 5-like
glutamine-dependent NAD(+) synthetase-like
putative uncharacterized protein DDB_G0282133
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcription initiation factor TFIID subunit 6-like
uncharacterized LOC123762351, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC123762351, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
uncharacterized LOC123762351, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized LOC123762351, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
uncharacterized LOC123762351, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
uncharacterized protein LOC123762351 isoform X1
uncharacterized protein LOC123762351 isoform X2
uncharacterized LOC123762353, transcript variant X2
uncharacterized LOC123762353, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123762353, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized LOC123762353, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized protein LOC123762353 isoform X5
uncharacterized protein LOC123762353 isoform X3
uncharacterized protein LOC123762353 isoform X2
uncharacterized protein LOC123762353 isoform X1
uncharacterized LOC123762353, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
uncharacterized protein LOC123762353 isoform X4