Procambarus clarkii strain Jiangsu linkage group LG32, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035504.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
basic salivary proline-rich protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
glycine-rich cell wall structural protein-like
protein sickie-like, transcript variant X5
COORDINATES: polyA evidence [ECO:0006239]
protein sickie-like, transcript variant X1
protein sickie-like, transcript variant X2
protein sickie-like, transcript variant X3
protein sickie-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
moesin/ezrin/radixin homolog 1-like, transcript variant X2
moesin/ezrin/radixin homolog 1-like isoform X2
moesin/ezrin/radixin homolog 1-like, transcript variant X1
moesin/ezrin/radixin homolog 1-like, transcript variant X3
moesin/ezrin/radixin homolog 1-like isoform X1
moesin/ezrin/radixin homolog 1-like isoform X3
prostamide/prostaglandin F synthase-like
cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like
similar to RNA sequence (same species):INSD:GBEV01008663.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 237 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 237 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00137
post-GPI attachment to proteins factor 2-like
pollen-specific leucine-rich repeat extensin-like protein 2
mediator of RNA polymerase II transcription subunit 21-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
proline-rich protein HaeIII subfamily 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
glucose dehydrogenase [FAD, quinone]-like, transcript variant X2
glucose dehydrogenase [FAD, quinone]-like, transcript variant X1
glucose dehydrogenase [FAD, quinone]-like
peroxisome assembly factor 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
peroxisome assembly factor 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X4
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X8
longitudinals lacking protein, isoforms H/M/V-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein LOC123762025 isoform X6
uncharacterized protein LOC123762025 isoform X4
uncharacterized protein LOC123762025 isoform X2
longitudinals lacking protein, isoforms H/M/V-like isoform X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
glutamate receptor ionotropic, delta-2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
glutamate receptor ionotropic, delta-1-like
molybdenum cofactor sulfurase 3-like, transcript variant X1
molybdenum cofactor sulfurase 3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
molybdenum cofactor sulfurase 3-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
molybdenum cofactor sulfurase 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
molybdenum cofactor sulfurase 3-like, transcript variant X5
molybdenum cofactor sulfurase 3-like isoform X1
molybdenum cofactor sulfurase 3-like isoform X2
molybdenum cofactor sulfurase 3-like isoform X3
E3 ubiquitin-protein ligase RNF19B-like, transcript variant X2
E3 ubiquitin-protein ligase RNF19B-like, transcript variant X1
ubiquitin carboxyl-terminal hydrolase 19-like, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 19-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 19-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 19-like
uncharacterized LOC123762034, transcript variant X1
uncharacterized LOC123762034, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized protein LOC123762034 isoform X2
uncharacterized protein LOC123762034 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like, transcript variant X3
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like, transcript variant X1
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like, transcript variant X2
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like
ceramide glucosyltransferase-like, transcript variant X2
ceramide glucosyltransferase-like, transcript variant X1
ubiquitin carboxyl-terminal hydrolase MINDY-3-like, transcript variant X3
ubiquitin carboxyl-terminal hydrolase MINDY-3-like, transcript variant X1
ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X1
ubiquitin carboxyl-terminal hydrolase MINDY-3-like, transcript variant X2
ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X2
ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X3
probable magnesium transporter NIPA1, transcript variant X3
probable magnesium transporter NIPA1, transcript variant X4
probable magnesium transporter NIPA1, transcript variant X2
probable magnesium transporter NIPA1, transcript variant X1
arylsulfatase H-like, transcript variant X2
arylsulfatase H-like, transcript variant X1
glucose-induced degradation protein 8 homolog
similar to RNA sequence (same species):INSD:GBEV01012293.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 772 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 382 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123762044, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123762044, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123762044, transcript variant X1
uncharacterized LOC123762044, transcript variant X2
uncharacterized protein LOC123762044 isoform X2
uncharacterized protein LOC123762044 isoform X1
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like, transcript variant X1
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like, transcript variant X4
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like, transcript variant X2
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like, transcript variant X3
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like
DNA mismatch repair protein Msh2-like, transcript variant X2
DNA mismatch repair protein Msh2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
TOM1-like protein 2, transcript variant X2
TOM1-like protein 2, transcript variant X5
TOM1-like protein 2, transcript variant X3
TOM1-like protein 2, transcript variant X1
TOM1-like protein 2, transcript variant X4
TOM1-like protein 2, transcript variant X6
dynein regulatory complex subunit 3-like, transcript variant X3
dynein regulatory complex subunit 3-like, transcript variant X1
dynein regulatory complex subunit 3-like, transcript variant X4
dynein regulatory complex subunit 3-like, transcript variant X2
dynein regulatory complex subunit 3-like isoform X2
dynein regulatory complex subunit 3-like isoform X1
dynein regulatory complex subunit 3-like isoform X4
dynein regulatory complex subunit 3-like isoform X3
phospholipase D1-like, transcript variant X5
phospholipase D1-like, transcript variant X6
phospholipase D1-like, transcript variant X2
phospholipase D1-like, transcript variant X7
phospholipase D1-like, transcript variant X3
phospholipase D1-like, transcript variant X4
phospholipase D1-like, transcript variant X1
zinc finger protein 271-like, transcript variant X2
zinc finger protein 271-like, transcript variant X1
zinc finger protein 271-like, transcript variant X3
uncharacterized LOC123762053, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
uncharacterized LOC123762053, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
uncharacterized LOC123762053, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized LOC123762053, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123762053, transcript variant X5
uncharacterized LOC123762053, transcript variant X1
similar to RNA sequence (same species):INSD:GARH01022937.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 170 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
prolyl 4-hydroxylase subunit alpha-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
protein jim lovell-like, transcript variant X1
protein jim lovell-like, transcript variant X2
protein jim lovell-like, transcript variant X3
protein jim lovell-like, transcript variant X4
son of sevenless homolog 2-like, transcript variant X2
son of sevenless homolog 2-like, transcript variant X1
son of sevenless homolog 2-like isoform X1
son of sevenless homolog 2-like isoform X2
NF-kappa-B inhibitor-interacting Ras-like protein 2, transcript variant X4
NF-kappa-B inhibitor-interacting Ras-like protein 2, transcript variant X2
NF-kappa-B inhibitor-interacting Ras-like protein 2, transcript variant X3
NF-kappa-B inhibitor-interacting Ras-like protein 2, transcript variant X1
NF-kappa-B inhibitor-interacting Ras-like protein 2, transcript variant X5
NF-kappa-B inhibitor-interacting Ras-like protein 2 isoform X1
NF-kappa-B inhibitor-interacting Ras-like protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X7
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X6
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X8
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X9
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X10
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X5
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X4
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X3
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X1
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like, transcript variant X2
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X5
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X6
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X7
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X4
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X3
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X2
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1-like isoform X1
U6 snRNA-associated Sm-like protein LSm4
ER membrane protein complex subunit 5-B-like
protein tincar-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
protein tincar-like, transcript variant X2
double-strand break repair protein MRE11-like, transcript variant X1
double-strand break repair protein MRE11-like, transcript variant X2
double-strand break repair protein MRE11-like, transcript variant X3
double-strand break repair protein MRE11-like
frataxin, mitochondrial-like, transcript variant X2
frataxin, mitochondrial-like, transcript variant X4
frataxin, mitochondrial-like, transcript variant X5
frataxin, mitochondrial-like, transcript variant X3
frataxin, mitochondrial-like, transcript variant X1
uncharacterized protein KIAA0825 homolog
18S rRNA aminocarboxypropyltransferase-like, transcript variant X4
18S rRNA aminocarboxypropyltransferase-like, transcript variant X1
18S rRNA aminocarboxypropyltransferase-like, transcript variant X5
18S rRNA aminocarboxypropyltransferase-like, transcript variant X2
18S rRNA aminocarboxypropyltransferase-like, transcript variant X3
18S rRNA aminocarboxypropyltransferase-like
uncharacterized LOC123762071, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123762071, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized protein LOC123762071 isoform X1
uncharacterized protein LOC123762071 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like, transcript variant X1
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like, transcript variant X3
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like, transcript variant X2
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like isoform X2
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like isoform X1
magnesium transporter NIPA2-like, transcript variant X3
magnesium transporter NIPA2-like, transcript variant X4
magnesium transporter NIPA2-like, transcript variant X2
magnesium transporter NIPA2-like, transcript variant X1
magnesium transporter NIPA2-like isoform X2
magnesium transporter NIPA2-like isoform X1
magnesium transporter NIPA2-like isoform X3
serine/arginine repetitive matrix protein 5-like
IQ and ubiquitin-like domain-containing protein
putative nuclease HARBI1, transcript variant X1
putative nuclease HARBI1, transcript variant X2
putative nuclease HARBI1, transcript variant X4
putative nuclease HARBI1, transcript variant X3
putative nuclease HARBI1, transcript variant X5
IQ domain-containing protein E-like, transcript variant X1
IQ domain-containing protein E-like, transcript variant X6
IQ domain-containing protein E-like, transcript variant X5
IQ domain-containing protein E-like, transcript variant X7
IQ domain-containing protein E-like, transcript variant X8
IQ domain-containing protein E-like, transcript variant X3
IQ domain-containing protein E-like, transcript variant X4
IQ domain-containing protein E-like, transcript variant X2
IQ domain-containing protein E-like isoform X1
IQ domain-containing protein E-like isoform X4
IQ domain-containing protein E-like isoform X2
IQ domain-containing protein E-like isoform X6
nuclear factor of activated T-cells 5-like, transcript variant X4
nuclear factor of activated T-cells 5-like, transcript variant X2
nuclear factor of activated T-cells 5-like, transcript variant X1
nuclear factor of activated T-cells 5-like, transcript variant X5
nuclear factor of activated T-cells 5-like, transcript variant X3
nuclear factor of activated T-cells 5-like isoform X1
nuclear factor of activated T-cells 5-like isoform X2
solute carrier family 23 member 1-like, transcript variant X1
solute carrier family 23 member 1-like, transcript variant X2
erythroid differentiation-related factor 1-like, transcript variant X3
erythroid differentiation-related factor 1-like, transcript variant X2
erythroid differentiation-related factor 1-like, transcript variant X6
erythroid differentiation-related factor 1-like, transcript variant X4
erythroid differentiation-related factor 1-like, transcript variant X1
erythroid differentiation-related factor 1-like, transcript variant X5
erythroid differentiation-related factor 1-like
NPC intracellular cholesterol transporter 2-like, transcript variant X2
NPC intracellular cholesterol transporter 2-like isoform X2
NPC intracellular cholesterol transporter 2-like, transcript variant X1
NPC intracellular cholesterol transporter 2-like isoform X1
uncharacterized LOC123762085, transcript variant X1
uncharacterized LOC123762085, transcript variant X2
uncharacterized LOC123762084, transcript variant X2
uncharacterized LOC123762084, transcript variant X1
nucleolar transcription factor 1-B-like, transcript variant X2
nucleolar transcription factor 1-B-like, transcript variant X1
triple functional domain protein-like, transcript variant X4
discoidin domain-containing receptor 2-like
similar to RNA sequence (same species):INSD:GARH01007414.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1188 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 426 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
U6 snRNA-associated Sm-like protein LSm5
triple functional domain protein-like, transcript variant X1
triple functional domain protein-like, transcript variant X5
triple functional domain protein-like, transcript variant X6
triple functional domain protein-like isoform X1
triple functional domain protein-like isoform X5
triple functional domain protein-like isoform X6
triple functional domain protein-like, transcript variant X2
triple functional domain protein-like, transcript variant X3
triple functional domain protein-like isoform X3
triple functional domain protein-like isoform X2
triple functional domain protein-like isoform X4
N-acetylgalactosamine kinase-like, transcript variant X5
N-acetylgalactosamine kinase-like, transcript variant X1
N-acetylgalactosamine kinase-like, transcript variant X3
N-acetylgalactosamine kinase-like, transcript variant X7
N-acetylgalactosamine kinase-like, transcript variant X6
N-acetylgalactosamine kinase-like, transcript variant X2
N-acetylgalactosamine kinase-like, transcript variant X4
N-acetylgalactosamine kinase-like isoform X1
N-acetylgalactosamine kinase-like isoform X2
ATP synthase subunit C lysine N-methyltransferase-like, transcript variant X2
ATP synthase subunit C lysine N-methyltransferase-like, transcript variant X1
ATP synthase subunit C lysine N-methyltransferase-like isoform X2
ATP synthase subunit C lysine N-methyltransferase-like isoform X1
transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
hypoxanthine-guanine phosphoribosyltransferase-like
ciliogenesis and planar polarity effector 2-like, transcript variant X2
ciliogenesis and planar polarity effector 2-like, transcript variant X3
ciliogenesis and planar polarity effector 2-like, transcript variant X1
ciliogenesis and planar polarity effector 2-like isoform X1
ciliogenesis and planar polarity effector 2-like isoform X2
ras-related protein Rab-32-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
ras-related protein Rab-32-like, transcript variant X1
ras-related protein Rab-32-like isoform X1
ras-related protein Rab-32-like isoform X2
sorting nexin-27-like, transcript variant X2
sorting nexin-27-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
beta-1,3-galactosyltransferase 1-like, transcript variant X1
beta-1,3-galactosyltransferase 1-like, transcript variant X2
beta-1,3-galactosyltransferase 1-like isoform X1
beta-1,3-galactosyltransferase 1-like isoform X2
paramyosin, long form-like, transcript variant X2
paramyosin, long form-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
mastermind-like domain-containing protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
mastermind-like domain-containing protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
mastermind-like domain-containing protein 1
AP-4 complex accessory subunit Tepsin-like
polyadenylate-binding protein-interacting protein 1-like
ceramide-1-phosphate transfer protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123762115, transcript variant X11
uncharacterized LOC123762115, transcript variant X4
uncharacterized LOC123762115, transcript variant X7
uncharacterized LOC123762115, transcript variant X12
uncharacterized LOC123762115, transcript variant X8
uncharacterized LOC123762115, transcript variant X9
uncharacterized LOC123762115, transcript variant X6
uncharacterized LOC123762115, transcript variant X1
uncharacterized LOC123762115, transcript variant X10
uncharacterized LOC123762115, transcript variant X3
uncharacterized LOC123762115, transcript variant X5
uncharacterized LOC123762115, transcript variant X2
uncharacterized protein LOC123762115 isoform X10
uncharacterized protein LOC123762115 isoform X3
uncharacterized protein LOC123762115 isoform X6
uncharacterized protein LOC123762115 isoform X11
uncharacterized protein LOC123762115 isoform X7
uncharacterized protein LOC123762115 isoform X8
uncharacterized protein LOC123762115 isoform X5
uncharacterized protein LOC123762115 isoform X1
uncharacterized protein LOC123762115 isoform X9
uncharacterized protein LOC123762115 isoform X2
uncharacterized protein LOC123762115 isoform X4
uncharacterized PPE family protein PPE21-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
protein sax-3-like, transcript variant X2
protein sax-3-like, transcript variant X1
succinate dehydrogenase assembly factor 4, mitochondrial-like, transcript variant X2
succinate dehydrogenase assembly factor 4, mitochondrial-like, transcript variant X1
succinate dehydrogenase assembly factor 4, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC123762121, transcript variant X4
uncharacterized LOC123762121, transcript variant X3
uncharacterized LOC123762121, transcript variant X2
uncharacterized LOC123762121, transcript variant X5
uncharacterized LOC123762121, transcript variant X1
uncharacterized protein LOC123762121 isoform X4
uncharacterized protein LOC123762121 isoform X3
uncharacterized protein LOC123762121 isoform X2
uncharacterized protein LOC123762121 isoform X5
uncharacterized protein LOC123762121 isoform X1
uncharacterized LOC123762122, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123762122, transcript variant X2
nose resistant to fluoxetine protein 6-like, transcript variant X2
nose resistant to fluoxetine protein 6-like, transcript variant X1
nose resistant to fluoxetine protein 6-like
C-type mannose receptor 2-like, transcript variant X1
C-type mannose receptor 2-like isoform X1
C-type mannose receptor 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
C-type mannose receptor 2-like isoform X2
uncharacterized LOC123762125, transcript variant X2
uncharacterized LOC123762125, transcript variant X1
uncharacterized LOC123762125, transcript variant X3
uncharacterized protein LOC123762125 isoform X1
uncharacterized protein LOC123762125 isoform X2
uncharacterized LOC123762126, transcript variant X3
uncharacterized LOC123762126, transcript variant X1
uncharacterized LOC123762126, transcript variant X2
uncharacterized protein LOC123762126 isoform X1
uncharacterized protein LOC123762126 isoform X2
arylsulfatase B-like, transcript variant X2
arylsulfatase B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
NEDD4 family-interacting protein 1-like, transcript variant X2
NEDD4 family-interacting protein 1-like, transcript variant X1
NEDD4 family-interacting protein 1-like isoform X2
NEDD4 family-interacting protein 1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transmembrane and coiled-coil domains protein 1-like, transcript variant X2
transmembrane and coiled-coil domains protein 1-like, transcript variant X5
transmembrane and coiled-coil domains protein 1-like, transcript variant X4
transmembrane and coiled-coil domains protein 1-like, transcript variant X1
transmembrane and coiled-coil domains protein 1-like, transcript variant X3
transmembrane and coiled-coil domains protein 2-like isoform X4
transmembrane and coiled-coil domains protein 1-like isoform X3
transmembrane and coiled-coil domains protein 1-like isoform X2
transmembrane and coiled-coil domains protein 1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
recQ-mediated genome instability protein 2-like, transcript variant X4
recQ-mediated genome instability protein 2-like, transcript variant X6
recQ-mediated genome instability protein 2-like isoform X2
recQ-mediated genome instability protein 2-like, transcript variant X1
recQ-mediated genome instability protein 2-like, transcript variant X2
recQ-mediated genome instability protein 2-like, transcript variant X3
recQ-mediated genome instability protein 2-like, transcript variant X5
recQ-mediated genome instability protein 2-like isoform X1
katanin p60 ATPase-containing subunit A-like 1, transcript variant X1
katanin p60 ATPase-containing subunit A-like 1, transcript variant X3
katanin p60 ATPase-containing subunit A-like 1, transcript variant X4
katanin p60 ATPase-containing subunit A-like 1, transcript variant X6
katanin p60 ATPase-containing subunit A-like 1, transcript variant X2
katanin p60 ATPase-containing subunit A-like 1, transcript variant X5
katanin p60 ATPase-containing subunit A-like 1 isoform X3
katanin p60 ATPase-containing subunit A-like 1 isoform X1
katanin p60 ATPase-containing subunit A-like 1 isoform X2
katanin p60 ATPase-containing subunit A-like 1 isoform X4
integumentary mucin C.1-like, transcript variant X2
integumentary mucin C.1-like, transcript variant X1
integumentary mucin C.1-like, transcript variant X3
band 7 protein AGAP004871-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
band 7 protein AGAP004871-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
band 7 protein AGAP004871-like isoform X3
band 7 protein AGAP004871-like isoform X4
band 7 protein AGAP004871-like, transcript variant X1
band 7 protein AGAP004871-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
band 7 protein AGAP004871-like isoform X1
band 7 protein AGAP004871-like isoform X2
mitochondrial import inner membrane translocase subunit Tim10 B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
mitochondrial import inner membrane translocase subunit Tim10 B-like, transcript variant X2
mitochondrial import inner membrane translocase subunit Tim10 B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial import inner membrane translocase subunit Tim10 B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transmembrane protein 45B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transmembrane protein 45B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transmembrane protein 45B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 56% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments
sodium-coupled monocarboxylate transporter 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
galactose-specific lectin nattectin-like, transcript variant X2
galactose-specific lectin nattectin-like, transcript variant X1
galactose-specific lectin nattectin-like isoform X2
C-type lectin domain family 11 member A-like isoform X1
snaclec bitiscetin subunit alpha-like, transcript variant X1
snaclec bitiscetin subunit alpha-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
snaclec bitiscetin subunit alpha-like isoform X1
snaclec bitiscetin subunit alpha-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol phosphatase PTPRQ-like, transcript variant X1
phosphatidylinositol phosphatase PTPRQ-like, transcript variant X2
phosphatidylinositol phosphatase PTPRQ-like, transcript variant X3
phosphatidylinositol phosphatase PTPRQ-like isoform X1
phosphatidylinositol phosphatase PTPRQ-like isoform X2
collagen alpha-1(XII) chain-like isoform X3
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
armadillo repeat-containing X-linked protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
ADP-ribosylation factor-like protein 6-interacting protein 4
CDK5 regulatory subunit-associated protein 2-like
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
follicle-stimulating hormone receptor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550
activating signal cointegrator 1 complex subunit 2 homolog
nuclear pore complex-interacting protein family member B11-like
nuclear pore complex-interacting protein family member B12-like
uncharacterized serine-rich protein C215.13-like
serine-aspartate repeat-containing protein F-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
flavin-containing monooxygenase FMO GS-OX5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments
putative methyl-accepting chemotaxis protein YoaH
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns