Procambarus clarkii strain Jiangsu linkage group LG30, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035502.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
sulfotransferase 1A1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
sulfotransferase 1A1-like, transcript variant X2
serine-aspartate repeat-containing protein F-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
COORDINATES: polyA evidence [ECO:0006239]
sulfotransferase 1A1-like, transcript variant X4
sulfotransferase 1A1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
cilia- and flagella-associated protein 251-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
sodium/potassium/calcium exchanger 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
galactoside 2-alpha-L-fucosyltransferase SEC1-like
tigger transposable element-derived protein 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
high-affinity choline transporter 1-like
similar to RNA sequence (same species):INSD:GBEV01005061.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 446 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 94 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
leukocyte receptor cluster member 8 homolog, transcript variant X2
leukocyte receptor cluster member 8 homolog, transcript variant X1
leukocyte receptor cluster member 8 homolog isoform X2
leukocyte receptor cluster member 8 homolog isoform X1
leukocyte receptor cluster member 8 homolog, transcript variant X3
leukocyte receptor cluster member 8 homolog isoform X3
structural maintenance of chromosomes protein 1A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
nucleoside diphosphate kinase 7-like, transcript variant X1
nucleoside diphosphate kinase 7-like, transcript variant X2
nucleoside diphosphate kinase 7-like isoform X2
nucleoside diphosphate kinase 7-like isoform X1
uncharacterized LOC123761296, transcript variant X1
uncharacterized LOC123761296, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Down syndrome cell adhesion molecule-like protein Dscam2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
glycine-rich RNA-binding protein 3, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
similar to RNA sequence (same species):INSD:GBEV01043852.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 566 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 45 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
katanin p60 ATPase-containing subunit A-like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
sodium-dependent phosphate transport protein 2B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
sodium-dependent phosphate transport protein 2B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
sodium-dependent phosphate transport protein 2B-like isoform X1
sodium-dependent phosphate transport protein 2B-like isoform X2
sodium-dependent phosphate transport protein 2B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
sodium-dependent phosphate transport protein 2B-like isoform X3
inactive tyrosine-protein kinase transmembrane receptor ROR1-like, transcript variant X1
inactive tyrosine-protein kinase transmembrane receptor ROR1-like, transcript variant X3
inactive tyrosine-protein kinase transmembrane receptor ROR1-like, transcript variant X4
inactive tyrosine-protein kinase transmembrane receptor ROR1-like isoform X1
inactive tyrosine-protein kinase transmembrane receptor ROR1-like isoform X3
inactive tyrosine-protein kinase transmembrane receptor ROR1-like isoform X4
inactive tyrosine-protein kinase transmembrane receptor ROR1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
inactive tyrosine-protein kinase transmembrane receptor ROR1-like isoform X2
proline-rich protein HaeIII subfamily 1-like
putative uncharacterized protein DDB_G0290521
transmembrane protein 267-like, transcript variant X2
transmembrane protein 267-like, transcript variant X1
transmembrane protein 267-like, transcript variant X3
U4/U6 small nuclear ribonucleoprotein Prp4-like, transcript variant X1
U4/U6 small nuclear ribonucleoprotein Prp4-like, transcript variant X2
U4/U6 small nuclear ribonucleoprotein Prp4-like
autophagy protein 5-like, transcript variant X3
autophagy protein 5-like, transcript variant X2
autophagy protein 5-like, transcript variant X1
ras-related protein Rab-24-like, transcript variant X2
ras-related protein Rab-24-like, transcript variant X1
serine-rich adhesin for platelets-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
serine-rich adhesin for platelets-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
serine-rich adhesin for platelets-like isoform X1
serine-rich adhesin for platelets-like isoform X2
serine-rich adhesin for platelets-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
serine-rich adhesin for platelets-like isoform X3
translation factor Guf1, mitochondrial-like, transcript variant X2
translation factor Guf1, mitochondrial-like, transcript variant X1
translation factor Guf1, mitochondrial-like
alkylated DNA repair protein alkB homolog 8-like, transcript variant X1
alkylated DNA repair protein alkB homolog 8-like, transcript variant X5
alkylated DNA repair protein alkB homolog 8-like, transcript variant X2
alkylated DNA repair protein alkB homolog 8-like, transcript variant X4
alkylated DNA repair protein alkB homolog 8-like, transcript variant X3
alkylated DNA repair protein alkB homolog 8-like isoform X1
alkylated DNA repair protein alkB homolog 8-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
2-hydroxyacyl-CoA lyase 1-like, transcript variant X4
2-hydroxyacyl-CoA lyase 1-like, transcript variant X1
2-hydroxyacyl-CoA lyase 1-like isoform X1
2-hydroxyacyl-CoA lyase 1-like, transcript variant X2
2-hydroxyacyl-CoA lyase 1-like, transcript variant X3
2-hydroxyacyl-CoA lyase 1-like, transcript variant X5
2-hydroxyacyl-CoA lyase 1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
rho family-interacting cell polarization regulator 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123761328, transcript variant X2
uncharacterized LOC123761328, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
cerebellar degeneration-related antigen 1-like
slowpoke-binding protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
slowpoke-binding protein-like isoform X1
slowpoke-binding protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
slowpoke-binding protein-like isoform X2
uncharacterized LOC123761334, transcript variant X4
uncharacterized LOC123761334, transcript variant X3
uncharacterized LOC123761334, transcript variant X2
uncharacterized LOC123761334, transcript variant X1
uncharacterized protein LOC123761334 isoform X4
uncharacterized protein LOC123761334 isoform X3
uncharacterized protein LOC123761334 isoform X2
uncharacterized protein LOC123761334 isoform X1
coiled-coil domain-containing protein 77-like
lysine-specific demethylase lid-like, transcript variant X1
lysine-specific demethylase lid-like, transcript variant X2
lysine-specific demethylase lid-like, transcript variant X3
lysine-specific demethylase lid-like, transcript variant X4
lysine-specific demethylase 5A-like isoform X1
lysine-specific demethylase 5A-like isoform X3
lysine-specific demethylase 5A-like isoform X2
lysine-specific demethylase lid-like isoform X4
serine/arginine repetitive matrix protein 1-like
dynamin-binding protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
dynamin-binding protein-like, transcript variant X2
rho guanine nucleotide exchange factor 37-like, transcript variant X1
rho guanine nucleotide exchange factor 37-like, transcript variant X2
rho guanine nucleotide exchange factor 37-like isoform X1
rho guanine nucleotide exchange factor 37-like isoform X2
excitatory amino acid transporter 3-like, transcript variant X3
excitatory amino acid transporter 3-like, transcript variant X2
excitatory amino acid transporter 3-like, transcript variant X1
excitatory amino acid transporter 3-like, transcript variant X5
excitatory amino acid transporter 3-like, transcript variant X6
excitatory amino acid transporter 3-like, transcript variant X7
excitatory amino acid transporter 3-like, transcript variant X4
excitatory amino acid transporter 3-like isoform X3
excitatory amino acid transporter 3-like isoform X2
excitatory amino acid transporter 3-like isoform X1
excitatory amino acid transporter 3-like isoform X4
uncharacterized LOC123761345, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123761345, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123761346, transcript variant X1
uncharacterized LOC123761346, transcript variant X2
uncharacterized protein LOC123761346 isoform X1
uncharacterized protein LOC123761346 isoform X2
uncharacterized LOC123761346, transcript variant X3
uncharacterized protein LOC123761346 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
uncharacterized LOC123761346, transcript variant X4
uncharacterized protein LOC123761346 isoform X4
COP9 signalosome complex subunit 7b-like, transcript variant X2
COP9 signalosome complex subunit 7b-like, transcript variant X1
COP9 signalosome complex subunit 7b-like isoform X1
COP9 signalosome complex subunit 7b-like isoform X2
cell division cycle-associated protein 3-like, transcript variant X2
cell division cycle-associated protein 3-like, transcript variant X1
cell division cycle-associated protein 3-like
dynamin-like 120 kDa protein, mitochondrial, transcript variant X1
dynamin-like 120 kDa protein, mitochondrial, transcript variant X3
dynamin-like 120 kDa protein, mitochondrial, transcript variant X2
dynamin-like 120 kDa protein, mitochondrial, transcript variant X4
dynamin-like 120 kDa protein, mitochondrial isoform X1
dynamin-like 120 kDa protein, mitochondrial isoform X3
dynamin-like 120 kDa protein, mitochondrial isoform X2
dynamin-like 120 kDa protein, mitochondrial isoform X4
uncharacterized LOC123761355, transcript variant X1
uncharacterized LOC123761355, transcript variant X2
uncharacterized protein LOC123761355 isoform X1
uncharacterized protein LOC123761355 isoform X2
interferon regulatory factor 2-binding protein 1-like, transcript variant X1
interferon regulatory factor 2-binding protein 1-like, transcript variant X2
interferon regulatory factor 2-binding protein 1-like, transcript variant X3
interferon regulatory factor 2-binding protein 1-like isoform X1
interferon regulatory factor 2-binding protein 1-like isoform X2
interferon regulatory factor 2-binding protein 1-like isoform X3
uncharacterized LOC123761531, transcript variant X2
uncharacterized LOC123761531, transcript variant X1
natural resistance-associated macrophage protein 2-like, transcript variant X3
natural resistance-associated macrophage protein 2-like, transcript variant X2
natural resistance-associated macrophage protein 2-like, transcript variant X4
natural resistance-associated macrophage protein 2-like, transcript variant X5
natural resistance-associated macrophage protein 2-like, transcript variant X6
natural resistance-associated macrophage protein 2-like, transcript variant X1
natural resistance-associated macrophage protein 2-like, transcript variant X8
natural resistance-associated macrophage protein 2-like, transcript variant X7
natural resistance-associated macrophage protein 2-like, transcript variant X9
natural resistance-associated macrophage protein 2-like isoform X3
natural resistance-associated macrophage protein 2-like isoform X2
natural resistance-associated macrophage protein 2-like isoform X1
natural resistance-associated macrophage protein 2-like isoform X4
sodium-dependent nutrient amino acid transporter 1-like, transcript variant X1
sodium-dependent nutrient amino acid transporter 1-like, transcript variant X2
sodium-dependent nutrient amino acid transporter 1-like isoform X1
sodium-dependent nutrient amino acid transporter 1-like isoform X2
spore coat protein SP70-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
spore coat protein SP70-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized protein LOC123761362 isoform X1
uncharacterized LOC123761363, transcript variant X2
uncharacterized LOC123761363, transcript variant X1
uncharacterized protein LOC123761363 isoform X1
uncharacterized protein LOC123761363 isoform X2
coiled-coil domain-containing protein 177-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein DDB_G0286299-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
intersectin-1-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
intersectin-1-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
intersectin-1-like, transcript variant X7
intersectin-1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
intersectin-1-like, transcript variant X2
intersectin-1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
intersectin-1-like, transcript variant X1
intersectin-1-like, transcript variant X10
intersectin-1-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
intersectin-1-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
intersectin-1-like, transcript variant X5
intersectin-1-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
intersectin-1-like, transcript variant X13
intersectin-1-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
mitochondrial import inner membrane translocase subunit Tim8 A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123761369, transcript variant X1
uncharacterized LOC123761369, transcript variant X2
uncharacterized LOC123761369, transcript variant X3
uncharacterized protein LOC123761369 isoform X1
uncharacterized protein LOC123761369 isoform X2
uncharacterized protein LOC123761369 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
putative uncharacterized protein ENSP00000383309
uncharacterized LOC123761373, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123761373, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized protein LOC123761373 isoform X2
uncharacterized protein LOC123761373 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
uncharacterized LOC123761374, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123761374, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized LOC123761374, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
tRNA (uracil-5-)-methyltransferase homolog A-like
mitochondrial tRNA methylthiotransferase CDK5RAP1-like
tRNA:m(4)X modification enzyme TRM13 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
tRNA:m(4)X modification enzyme TRM13 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
tRNA:m(4)X modification enzyme TRM13 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
tRNA:m(4)X modification enzyme TRM13 homolog
dolichol-phosphate mannosyltransferase subunit 3-like, transcript variant X1
dolichol-phosphate mannosyltransferase subunit 3-like, transcript variant X2
dolichol-phosphate mannosyltransferase subunit 3-like isoform X2
dolichol-phosphate mannosyltransferase subunit 3-like isoform X1
ectopic P granules protein 5 homolog, transcript variant X2
ectopic P granules protein 5 homolog, transcript variant X3
ectopic P granules protein 5 homolog, transcript variant X1
ectopic P granules protein 5 homolog isoform X2
ectopic P granules protein 5 homolog isoform X1
uncharacterized LOC123761386, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123761386, transcript variant X1
uncharacterized protein LOC123761386 isoform X1
uncharacterized protein LOC123761386 isoform X2
choline transporter-like 1, transcript variant X1
choline transporter-like 1, transcript variant X3
choline transporter-like 1, transcript variant X2
uncharacterized LOC123761389, transcript variant X1
uncharacterized protein LOC123761389 isoform X1
uncharacterized LOC123761389, transcript variant X2
uncharacterized protein LOC123761389 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
RNA exonuclease 4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
RNA exonuclease 4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcription initiation factor TFIID subunit 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
eukaryotic translation initiation factor 3 subunit A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
uncharacterized abhydrolase domain-containing protein DDB_G0269086-like
similar to RNA sequence (same species):INSD:GBEV01006311.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 17 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 17 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
nose resistant to fluoxetine protein 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123761398, transcript variant X1
uncharacterized protein LOC123761398 isoform X1
uncharacterized LOC123761398, transcript variant X2
uncharacterized protein LOC123761398 isoform X2
transmembrane protein 47-like, transcript variant X2
transmembrane protein 47-like, transcript variant X3
transmembrane protein 47-like isoform X2
transmembrane protein 47-like, transcript variant X4
transmembrane protein 47-like isoform X3
transmembrane protein 47-like, transcript variant X1
transmembrane protein 47-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
translocon-associated protein subunit delta-like
3-oxoacyl-[acyl-carrier-protein] reductase FabG-like
flocculation protein FLO11-like, transcript variant X1
flocculation protein FLO11-like, transcript variant X3
flocculation protein FLO11-like, transcript variant X2
flocculation protein FLO11-like isoform X1
cell wall integrity and stress response component 2-like isoform X2
cell wall integrity and stress response component 2-like isoform X3
serine/arginine repetitive matrix protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
putative uncharacterized protein DDB_G0271606
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative uncharacterized protein DDB_G0271606
basic salivary proline-rich protein 1-like
UPF0545 protein C22orf39 homolog, transcript variant X1
UPF0545 protein C22orf39 homolog, transcript variant X2
UPF0545 protein C22orf39 homolog isoform X1
UPF0545 protein C22orf39 homolog isoform X2
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like, transcript variant X2
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like, transcript variant X1
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like, transcript variant X3
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like, transcript variant X4
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X2
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X1
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X3
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X4
bifunctional arginine demethylase and lysyl-hydroxylase PSR-like
tRNA (guanine-N(7)-)-methyltransferase-like, transcript variant X1
tRNA (guanine-N(7)-)-methyltransferase-like, transcript variant X2
tRNA (guanine-N(7)-)-methyltransferase-like isoform X1
tRNA (guanine-N(7)-)-methyltransferase-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
similar to RNA sequence (same species):INSD:GARH01046047.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1700 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 1311 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns