Procambarus clarkii strain Jiangsu linkage group LG02, ASM2042438v2, whole genome shotgun sequence.
Procambarus clarkii (red swamp crayfish)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans
REFSEQ INFORMATION: The reference sequence is identical to\nCM035474.1.\nAssembly name: ASM2042438v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Freshwater Fisheries Research\nInstitute of Jiangsu Province, Nanjing 210017, China on 2021/10/12.\nThe original whole-genome shotgun project has the accession\nJAIWQB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Freshwater Fisheries Research Institute\n of Jiangsu Province, Nanjing 210017,\n China\nAssembly Method :: LACHESIS v. may-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Procambarus clarkii Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
COORDINATES: polyA evidence [ECO:0006239]
U1 small nuclear ribonucleoprotein 70 kDa-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
NPC intracellular cholesterol transporter 1-like
NPC intracellular cholesterol transporter 1 homolog 1b-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
ATP-binding cassette sub-family D member 3-like
zinc finger HIT domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X2
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X3
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X4
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X1
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X2
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X4
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X3
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
probable 3',5'-cyclic phosphodiesterase pde-5, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X5
probable 3',5'-cyclic phosphodiesterase pde-5 isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
alpha- and gamma-adaptin-binding protein p34-like
putative uncharacterized protein FLJ46204
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
histone-lysine N-methyltransferase 2D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein DDB_G0271670-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
glucose-dependent insulinotropic receptor-like
probable serine/threonine-protein kinase samkC
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
probable cytochrome P450 49a1, transcript variant X2
probable cytochrome P450 49a1, transcript variant X1
uncharacterized LOC123755131, transcript variant X1
uncharacterized protein LOC123755131 isoform X1
uncharacterized LOC123755131, transcript variant X2
uncharacterized protein LOC123755131 isoform X2
dihydrolipoyl dehydrogenase, mitochondrial-like
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X3
translin-associated factor X-interacting protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123755218, transcript variant X2
uncharacterized LOC123755218, transcript variant X1
uncharacterized LOC123755218, transcript variant X3
uncharacterized protein LOC123755218 isoform X3
uncharacterized protein LOC123755218 isoform X2
uncharacterized protein LOC123755218 isoform X1
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
lisH domain-containing protein C1711.05-like
uncharacterized LOC123755288, transcript variant X2
uncharacterized LOC123755288, transcript variant X4
uncharacterized LOC123755288, transcript variant X1
uncharacterized LOC123755288, transcript variant X3
uncharacterized protein LOC123755288 isoform X2
uncharacterized protein LOC123755288 isoform X3
uncharacterized protein LOC123755288 isoform X1
uncharacterized protein LOC123755288 isoform X4
protein asteroid-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein asteroid-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
protein asteroid-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
methyl-CpG-binding protein 2-like, transcript variant X1
methyl-CpG-binding protein 2-like, transcript variant X3
methyl-CpG-binding protein 2-like, transcript variant X2
mediator of RNA polymerase II transcription subunit 12-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 12-like, transcript variant X4
mediator of RNA polymerase II transcription subunit 12-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 12-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 12-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 12-like isoform X1
mediator of RNA polymerase II transcription subunit 12-like isoform X4
mediator of RNA polymerase II transcription subunit 12-like isoform X3
mediator of RNA polymerase II transcription subunit 12-like isoform X2
mediator of RNA polymerase II transcription subunit 12-like isoform X5
uncharacterized LOC123755358, transcript variant X3
uncharacterized LOC123755358, transcript variant X2
uncharacterized LOC123755358, transcript variant X1
uncharacterized protein LOC123755358 isoform X3
uncharacterized protein LOC123755358 isoform X2
uncharacterized protein LOC123755358 isoform X1
serine-rich adhesin for platelets-like, transcript variant X3
serine-rich adhesin for platelets-like, transcript variant X2
serine-rich adhesin for platelets-like, transcript variant X6
serine-rich adhesin for platelets-like, transcript variant X5
serine-rich adhesin for platelets-like, transcript variant X1
serine-rich adhesin for platelets-like, transcript variant X4
serine-rich adhesin for platelets-like isoform X3
serine-rich adhesin for platelets-like isoform X2
E3 ubiquitin-protein ligase RNF126-like, transcript variant X1
E3 ubiquitin-protein ligase RNF126-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
E3 ubiquitin-protein ligase RNF126-like isoform X1
E3 ubiquitin-protein ligase RNF126-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
vitelline membrane outer layer protein 1-like
Down syndrome cell adhesion molecule-like protein Dscam2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Down syndrome cell adhesion molecule-like protein Dscam2, transcript variant X3
Down syndrome cell adhesion molecule-like protein Dscam2, transcript variant X2
Down syndrome cell adhesion molecule-like protein Dscam2 isoform X1
Down syndrome cell adhesion molecule-like protein Dscam2 isoform X3
Down syndrome cell adhesion molecule-like protein Dscam2 isoform X2
guanine nucleotide-binding protein-like 3 homolog
conserved oligomeric Golgi complex subunit 3-like
mitochondrial transcription rescue factor 1-like
ubiquitin carboxyl-terminal hydrolase 31-like, transcript variant X1
ubiquitin carboxyl-terminal hydrolase 31-like, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 31-like isoform X1
ubiquitin carboxyl-terminal hydrolase 31-like isoform X2
uncharacterized LOC123754941, transcript variant X2
uncharacterized LOC123754941, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
alpha-(1,3)-fucosyltransferase C-like, transcript variant X1
alpha-(1,3)-fucosyltransferase C-like, transcript variant X2
alpha-(1,3)-fucosyltransferase C-like, transcript variant X3
alpha-(1,3)-fucosyltransferase C-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
guanine nucleotide-binding protein subunit gamma 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
PCNA-interacting partner-like, transcript variant X1
PCNA-interacting partner-like, transcript variant X3
PCNA-interacting partner-like, transcript variant X2
PCNA-interacting partner-like, transcript variant X4
PCNA-interacting partner-like, transcript variant X5
PCNA-interacting partner-like isoform X1
PCNA-interacting partner-like isoform X2
PCNA-interacting partner-like isoform X3
PCNA-interacting partner-like isoform X4
apolipoprotein D-like, transcript variant X1
apolipoprotein D-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ras-related and estrogen-regulated growth inhibitor-like, transcript variant X3
ras-related and estrogen-regulated growth inhibitor-like, transcript variant X2
ras-related and estrogen-regulated growth inhibitor-like, transcript variant X1
ras-related and estrogen-regulated growth inhibitor-like, transcript variant X4
ras-related and estrogen-regulated growth inhibitor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X1
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X3
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X4
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X2
gastrula zinc finger protein XlCGF8.2DB-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transformation/transcription domain-associated protein-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transformation/transcription domain-associated protein-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transformation/transcription domain-associated protein-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transformation/transcription domain-associated protein-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transformation/transcription domain-associated protein-like, transcript variant X4
transformation/transcription domain-associated protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transformation/transcription domain-associated protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transformation/transcription domain-associated protein-like isoform X5
transformation/transcription domain-associated protein-like isoform X2
transformation/transcription domain-associated protein-like isoform X6
transformation/transcription domain-associated protein-like isoform X4
transformation/transcription domain-associated protein-like isoform X3
transformation/transcription domain-associated protein-like isoform X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
zinc finger protein 271-like, transcript variant X10
zinc finger protein 271-like, transcript variant X11
zinc finger protein 271-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
zinc finger protein 271-like, transcript variant X6
zinc finger protein 271-like, transcript variant X2
zinc finger protein 271-like, transcript variant X1
zinc finger protein 271-like, transcript variant X5
zinc finger protein 271-like, transcript variant X7
zinc finger protein 271-like, transcript variant X8
zinc finger protein 271-like, transcript variant X3
zinc finger protein 271-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
zinc finger protein 271-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
zinc finger protein 271-like, transcript variant X4
galactoside 2-alpha-L-fucosyltransferase SEC1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
retinol dehydrogenase 11-like, transcript variant X1
retinol dehydrogenase 11-like, transcript variant X2
retinol dehydrogenase 11-like isoform X1
retinol dehydrogenase 13-like isoform X2
von Willebrand factor A domain-containing protein 5A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123754997, transcript variant X3
uncharacterized LOC123754997, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
uncharacterized LOC123754997, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
uncharacterized protein LOC123754997 isoform X2
uncharacterized protein LOC123754997 isoform X1
uncharacterized protein LOC123754997 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 40% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
tripartite motif-containing protein 59-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123755014, transcript variant X1
uncharacterized LOC123755014, transcript variant X2
baculoviral IAP repeat-containing protein 3-like, transcript variant X1
baculoviral IAP repeat-containing protein 3-like, transcript variant X2
baculoviral IAP repeat-containing protein 3-like isoform X1
baculoviral IAP repeat-containing protein 2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X7
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X6
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X5
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X3
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X1
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X4
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like, transcript variant X2
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like isoform X7
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X6
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X5
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X3
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X1
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X4
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
induced during hyphae development protein 1-like
uncharacterized LOC123755825, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123755825, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123755825, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123755825, transcript variant X1
uncharacterized protein LOC123755825 isoform X1
uncharacterized protein LOC123755825 isoform X2
60S ribosomal protein L30-like, transcript variant X1
60S ribosomal protein L30-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
tigger transposable element-derived protein 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
similar to RNA sequence (same species):INSD:GBEV01018828.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1228 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 861 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.