Vibrio cholerae strain RFB16 plasmid unnamed, complete sequence.
type: Entry
definition: Vibrio cholerae strain RFB16 plasmid unnamed, complete sequence.
sequence version: NZ_CP043555.1
sequence date: 2022-11-10
sequence: sequence
division: CON
label: NZ_CP043555.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12572458
keyword: RefSeq
source: Vibrio cholerae
organism: Vibrio cholerae
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP043555.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye 2.4.1 v. 2.4.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 555x\nSequencing Technology :: PacBio Sequel II\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/09/2022 22:49:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,839\nCDSs (total) :: 3,702\nGenes (coding) :: 3,644\nCDSs (with protein) :: 3,644\nGenes (RNA) :: 137\nrRNAs :: 11, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 11, 10, 10 (5S, 16S, 23S)\ntRNAs :: 102\nncRNAs :: 4\nPseudo Genes (total) :: 58\nCDSs (without protein) :: 58\nPseudo Genes (ambiguous residues) :: 0 of 58\nPseudo Genes (frameshifted) :: 23 of 58\nPseudo Genes (incomplete) :: 33 of 58\nPseudo Genes (internal stop) :: 16 of 58\nPseudo Genes (multiple problems) :: 10 of 58\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 49113
topology: circular
so has quality: SO_0000988
location: 1..49113
location: region:1-49113:1
RO_0002162: 666

NZ_CP043555
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12572458
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Vibrio cholerae strains RFB05 and RFB16 isolated from North Park Lake in Allegheny County Pennsylvania
author: Bina, R.F.
journal: Unpublished

2
title: Direct Submission
author: Bina, R.F.
journal: Submitted (28-AUG-2019) Microbiology and Molecular Genetics, University of Pittsburgh, 450 Technology Drive, Pittsburgh, PA 15219, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49113:1
position: 49113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-49113:1:source
so part of: sequence
organism: Vibrio cholerae
mol type: genomic DNA
strain: RFB16
isolation source: North Park Lake
plasmid: unnamed
country: USA: Pittsburgh
lat lon: 40.597900 N 79.997928 W
collection date: 2017-08-27
collected by: Rachel F. Bina

666
type: Taxonomy
SIO_000068: taxonomy

F0316_RS19950
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS19950
so part of: sequence
location: join(48822..49113,1..605)
location: region:1-49113:1
so has part: feature:48822-49113:1:exon
so has part: feature:1-605:1:exon
subclass of: SO_0000010

69722317
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:48822-49113:1:exon

position:48822:1
position: 48822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-605:1:exon

position:605:1
position: 605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F0316_RS19950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS19950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCKLYIYRADHGSFAEALKCEAVYQSTGDALEPEFVDGPAGRVTYLSDMHSAIQTVCNAAGRDDLVFGTVIKGIFWELEELIDHFEKINEWPSENYPEKVEKLAQDAHKGCGLIYELFASRYVNEIDNLVFNLPKGVKDQVIKLAENYGYEVFTAEQQAEEQWDDDVHYCSHGIEADCCPAGCGDLDDVPYDEMQEPSGYNEAGVIHSRVESMIVMIKQGKNMSPLDWCMLKQYVHSNPDACAWYDDFFTDPLKGSQETIRSTGDLIRHLQRLVLDACFDLRLNKRVEDAKNEVGALV
SIO_010081: F0316_RS19950
subclass of: SO_0000673
so part of: F0316_RS19950
location: join(48822..49113,1..605)
location: region:1-49113:1
so has part: feature:48822-49113:1:exon
so has part: feature:1-605:1:exon

WP_216364824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48822-49113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-605:1:exon

F0316_RS13835
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13835
old locus tag: F0316_13835
so part of: sequence
location: 827..1162
location: region:827-1162:1
so has part: feature:827-1162:1:exon
subclass of: SO_0000010

69721213
type: Gene
SIO_000068: ncbigene

position:827:1
position: 827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162:1
position: 1162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827-1162:1:exon

F0316_RS13835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13835
old locus tag: F0316_13835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRDKIRLIVVQKKDSKWMQIHFCRLLQRGASVIDASPQGVLDVVDVADLWFPVPVGTDLFEAVECILTTHKVAHHLVHLNKVGEIEPLGAFCGDWEAVFSPVNATNTGEM
SIO_010081: F0316_RS13835
subclass of: SO_0000673
so part of: F0316_RS13835
location: 827..1162
location: region:827-1162:1
so has part: feature:827-1162:1:exon

WP_149560565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:827-1162:1:exon

F0316_RS13840
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13840
old locus tag: F0316_13840
so part of: sequence
location: 1236..1490
location: region:1236-1490:1
so has part: feature:1236-1490:1:exon
subclass of: SO_0000010

69721214
type: Gene
SIO_000068: ncbigene

position:1236:1
position: 1236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490:1
position: 1490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236-1490:1:exon

F0316_RS13840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13840
old locus tag: F0316_13840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENVVNKSVNILKFELGEVVMTRGVSELSEYGLNLLQYLRRHVSGDWGDIEEGDRLQNEESVMHGGRIFSAYNLSGMPESRCEY
SIO_010081: F0316_RS13840
subclass of: SO_0000673
so part of: F0316_RS13840
location: 1236..1490
location: region:1236-1490:1
so has part: feature:1236-1490:1:exon

WP_149560566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1236-1490:1:exon

F0316_RS13845
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13845
old locus tag: F0316_13845
so part of: sequence
location: 1627..2010
location: region:1627-2010:1
so has part: feature:1627-2010:1:exon
subclass of: SO_0000010

69721215
type: Gene
SIO_000068: ncbigene

position:1627:1
position: 1627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010:1
position: 2010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2010:1:exon

F0316_RS13845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13845
old locus tag: F0316_13845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIIIRFSNIPEELCFEVGCRTEYANAVKEAWHYAGDSLDELSCLVRCPGNLPNAWESVPGLLVPGSKGRIVDVYRQWPSIVDFAKRLNDLSEIVEESKHLDGIVEWPEGDVTKRPQDVLSRLHLIK
SIO_010081: F0316_RS13845
subclass of: SO_0000673
so part of: F0316_RS13845
location: 1627..2010
location: region:1627-2010:1
so has part: feature:1627-2010:1:exon

WP_149560567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2010:1:exon

F0316_RS13850
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13850
old locus tag: F0316_13850
so part of: sequence
location: 2149..2958
location: region:2149-2958:1
so has part: feature:2149-2958:1:exon
subclass of: SO_0000010

69721216
type: Gene
SIO_000068: ncbigene

position:2149:1
position: 2149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958:1
position: 2958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149-2958:1:exon

F0316_RS13850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13850
old locus tag: F0316_13850
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MGKVTSVSIQKGGPGKTTVCRNLGEEVSEAGFKVLLIDNDPQGNLTKAIFGDDLPAEIMKATEAVTSGTQKVAPGMSNTYFLYEKDEMPEPYKVTESLYIIGATKHLAEMGTRSVDCVYEFKDKMEVLSEEFDHVFIDCPPAAGTLQTAAHGASDYLLIPTELNEDSIDGVKQQLESALANKKRLNPVLEVLGILVNGKDSHKINIEEYHLETLKELYGDKIFKSIITHSVKVSEARSFNKTVRQHAPKSVQAEQFVALTKEYLQRSQG
SIO_010081: F0316_RS13850
subclass of: SO_0000673
so part of: F0316_RS13850
location: 2149..2958
location: region:2149-2958:1
so has part: feature:2149-2958:1:exon

WP_042988671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2149-2958:1:exon

F0316_RS13855
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13855
old locus tag: F0316_13855
so part of: sequence
location: 2964..3983
location: region:2964-3983:1
so has part: feature:2964-3983:1:exon
subclass of: SO_0000010

69721217
type: Gene
SIO_000068: ncbigene

position:2964:1
position: 2964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3983:1
position: 3983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964-3983:1:exon

F0316_RS13855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13855
old locus tag: F0316_13855
inference: COORDINATES: protein motif:HMM:TIGR00180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSSLKDKLAQHKAKKTSGDAERVSSVSELLGADGDADILEMVEKAKTDGRYLSLPVDSFLPDPNQPRKTFDPERIDELRSSIESKGQLQPILVGDRLPNGKYPIIAGERRWRAISESSLVSEVQAIIRAGDVDELYLLLMQIDENNQREQIPAVENAMAMKRVVDICKAEGHDQAYAAKMLNVSPGQLSKHLALIDAPMIVTSLSLYGETQDVEVLYNLAKASEVKPKEVAELIDQWRSGELDTNFRKASKEIAGEAKQVKKESKAQVDKDTESGSKGPKEPRDNNVPPKPKKASAVRLGLDNDVFMLTVEVGNKKLSFRVEAEAVVSLKGDIDKNWSE
SIO_010081: F0316_RS13855
subclass of: SO_0000673
so part of: F0316_RS13855
location: 2964..3983
location: region:2964-3983:1
so has part: feature:2964-3983:1:exon

WP_149560568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2964-3983:1:exon

F0316_RS13860
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13860
old locus tag: F0316_13860
so part of: sequence
location: 3983..4297
location: region:3983-4297:1
so has part: feature:3983-4297:1:exon
subclass of: SO_0000010

69721218
type: Gene
SIO_000068: ncbigene

position:4297:1
position: 4297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3983-4297:1:exon

F0316_RS13860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13860
old locus tag: F0316_13860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEQKATYGQEHSDNTVSLGKCWAALREANVVGIISMRVPSDVDFDTYRKKATECLELLGQVKSGEMIEREGERYFVLRPTHANRGKKPRQAKELLIYQPRSNV
SIO_010081: F0316_RS13860
subclass of: SO_0000673
so part of: F0316_RS13860
location: 3983..4297
location: region:3983-4297:1
so has part: feature:3983-4297:1:exon

WP_149560569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3983-4297:1:exon

F0316_RS13865
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13865
old locus tag: F0316_13865
so part of: sequence
location: 4290..4613
location: region:4290-4613:1
so has part: feature:4290-4613:1:exon
subclass of: SO_0000010

69721219
type: Gene
SIO_000068: ncbigene

position:4290:1
position: 4290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4613:1
position: 4613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290-4613:1:exon

F0316_RS13865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13865
old locus tag: F0316_13865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEEYEPIEQRLVKAMLKNEKKPEIILMGTSLGFEVFIRHGKELFQLYTQRKSPRVFRSPNTAINFLAELGAGRIVIDGLDNWKPDTYVNQSSRPKRNGAKNKQERS
SIO_010081: F0316_RS13865
subclass of: SO_0000673
so part of: F0316_RS13865
location: 4290..4613
location: region:4290-4613:1
so has part: feature:4290-4613:1:exon

WP_149560570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4290-4613:1:exon

F0316_RS13870
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13870
old locus tag: F0316_13870
so part of: sequence
location: 4619..5083
location: region:4619-5083:1
so has part: feature:4619-5083:1:exon
subclass of: SO_0000010

69721220
type: Gene
SIO_000068: ncbigene

position:4619:1
position: 4619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5083:1
position: 5083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4619-5083:1:exon

F0316_RS13870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13870
old locus tag: F0316_13870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSNSQPLSQGYDDFPEVGENPLVEQPKRDDRKGFKNPLFPNDSVTTCSGFINEIRSHQKGDDVLYFVRVGLIQGSRKNDHDDWQGDITNCDLLVGSTLRKWAESMKQFKDPFAGIRVGFVIRNLKFTPGLYEGKPVLDSRGVLEAISIGHLDQ
SIO_010081: F0316_RS13870
subclass of: SO_0000673
so part of: F0316_RS13870
location: 4619..5083
location: region:4619-5083:1
so has part: feature:4619-5083:1:exon

WP_149560571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4619-5083:1:exon

F0316_RS13875
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13875
old locus tag: F0316_13875
so part of: sequence
location: 5154..5342
location: region:5154-5342:1
so has part: feature:5154-5342:1:exon
subclass of: SO_0000010

69721221
type: Gene
SIO_000068: ncbigene

position:5154:1
position: 5154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342:1
position: 5342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5154-5342:1:exon

F0316_RS13875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13875
old locus tag: F0316_13875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSAILIVLFFIVMAILVNPHIQPRKARAGVTNDVELGVSLNRNQIIGRSSCDPIDQKFFDE
SIO_010081: F0316_RS13875
subclass of: SO_0000673
so part of: F0316_RS13875
location: 5154..5342
location: region:5154-5342:1
so has part: feature:5154-5342:1:exon

WP_149560572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5154-5342:1:exon

F0316_RS13880
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13880
old locus tag: F0316_13880
so part of: sequence
location: 5353..5682
location: region:5353-5682:1
so has part: feature:5353-5682:1:exon
subclass of: SO_0000010

69721222
type: Gene
SIO_000068: ncbigene

position:5353:1
position: 5353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5682:1
position: 5682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5353-5682:1:exon

F0316_RS13880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13880
old locus tag: F0316_13880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTTCILTFFSVLVSASAFASVKCEPELIKGVQVMKSGQIIYTSQDGIRRLAATPENPVATQNVIQTLLKAVEQGYYIQSAFPNGYDCGSGNTTASAEWIYVQNPHNR
SIO_010081: F0316_RS13880
subclass of: SO_0000673
so part of: F0316_RS13880
location: 5353..5682
location: region:5353-5682:1
so has part: feature:5353-5682:1:exon

WP_149560573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5353-5682:1:exon

F0316_RS13890
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13890
old locus tag: F0316_13890
so part of: sequence
location: 5947..6225
location: region:5947-6225:1
so has part: feature:5947-6225:1:exon
subclass of: SO_0000010

69721223
type: Gene
SIO_000068: ncbigene

position:5947:1
position: 5947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225:1
position: 6225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5947-6225:1:exon

F0316_RS13890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13890
old locus tag: F0316_13890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIRIVLFAFFVSFFSTASSAEGNYQFNIDDFKVALQQAKDNAMSNPTTENLSWYQKLSTLSVDYSVAIATNDDVEPIRKKMSEAISKGKVE
SIO_010081: F0316_RS13890
subclass of: SO_0000673
so part of: F0316_RS13890
location: 5947..6225
location: region:5947-6225:1
so has part: feature:5947-6225:1:exon

WP_149560575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5947-6225:1:exon

F0316_RS13895
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13895
old locus tag: F0316_13895
so part of: sequence
location: 6230..7003
location: region:6230-7003:1
so has part: feature:6230-7003:1:exon
subclass of: SO_0000010

69721224
type: Gene
SIO_000068: ncbigene

position:6230:1
position: 6230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7003:1
position: 7003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6230-7003:1:exon

F0316_RS13895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13895
old locus tag: F0316_13895
inference: COORDINATES: protein motif:HMM:NF022337.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2726 domain-containing protein
translation: MLVNLFFLAAFIIAAIFFIAFKWGSSSRFDEYPYERAGPLLTPAEHNFYKVLGKVLPNGYIVTFKVRIGDVLKVRKGIDKKRAFVMRGKVQQKHFDFVICRLDDMKVVCCIELNDASHNRRDRVKRDAFVRSACKAGGVTLLEIKNRRSYVIDDIREMVKAAIQGETVNISDSSDIPEPEIQERTEVAKLSSSKLAKQHGCSTDEFMLKLVESMYLEVRGGEFQLSEFGMNIGGEEKKHPRYGKYFVWPENLPLSSK
SIO_010081: F0316_RS13895
subclass of: SO_0000673
so part of: F0316_RS13895
location: 6230..7003
location: region:6230-7003:1
so has part: feature:6230-7003:1:exon

WP_172626046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6230-7003:1:exon

F0316_RS13900
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13900
old locus tag: F0316_13900
so part of: sequence
location: 7031..7486
location: region:7031-7486:1
so has part: feature:7031-7486:1:exon
subclass of: SO_0000010

69721225
type: Gene
SIO_000068: ncbigene

position:7031:1
position: 7031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7486:1
position: 7486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7031-7486:1:exon

F0316_RS13900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13900
old locus tag: F0316_13900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLTFNDAVEFVKNNYSKMILDNHVLVSVRYLPGHPDGDFHIYTLEFEIDDEGGWFSSSFMSGWIPEVGFGVEDIFGGRTSEELSKDIGPDVDHLSFFLVKNRDFFGLTTEYTLKRIFSDLPDPDFNDSDDMQEFRTMAISKIKSLNDANM
SIO_010081: F0316_RS13900
subclass of: SO_0000673
so part of: F0316_RS13900
location: 7031..7486
location: region:7031-7486:1
so has part: feature:7031-7486:1:exon

WP_149560577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7031-7486:1:exon

F0316_RS13905
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13905
old locus tag: F0316_13905
so part of: sequence
location: 7731..8102
location: region:7731-8102:1
so has part: feature:7731-8102:1:exon
subclass of: SO_0000010

69721226
type: Gene
SIO_000068: ncbigene

position:7731:1
position: 7731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8102:1
position: 8102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8102:1:exon

F0316_RS13905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13905
old locus tag: F0316_13905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSILKSIDLIKMQYEAVVECIEGLKSKQVALEKAGIDYGTPNYKEGKYLRIVRPAKDGRSRQFEYVGSDPAKQKVVLSAIERGKEYDALDKRVKQLEESLRKLDSDMSYMVKNFEWSHGLSLN
SIO_010081: F0316_RS13905
subclass of: SO_0000673
so part of: F0316_RS13905
location: 7731..8102
location: region:7731-8102:1
so has part: feature:7731-8102:1:exon

WP_149560578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8102:1:exon

F0316_RS13910
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13910
old locus tag: F0316_13910
so part of: sequence
location: 8166..8897
location: region:8166-8897:1
so has part: feature:8166-8897:1:exon
subclass of: SO_0000010

69721227
type: Gene
SIO_000068: ncbigene

position:8166:1
position: 8166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8897:1
position: 8897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8166-8897:1:exon

F0316_RS13910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13910
old locus tag: F0316_13910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MQPTNELYGALQSAYEHFNRSLFDGKLPAVIFTAQRQKGVMGYFSPERWVSKNGATCHEIAINPTYVGKSALIEVFQTLVHEQCHLLQFCYGKPGRRGYHNKEWADMMESVGLMPSTTGRPGGQKTGEKMSDYPIAGGAFLKECNFLVSSGGFDLPWVDRFAQGAGVSVSESFVQGDLPKESMVKLMTSVVEFFDKEAFVLPEEMKENRKKVKYSCPGCGVNVWGKPELLIKCCECDIEFHET
SIO_010081: F0316_RS13910
subclass of: SO_0000673
so part of: F0316_RS13910
location: 8166..8897
location: region:8166-8897:1
so has part: feature:8166-8897:1:exon

WP_042988629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8166-8897:1:exon

F0316_RS13915
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13915
old locus tag: F0316_13915
so part of: sequence
location: complement(9013..9882)
location: region:9013-9882:-1
so has part: feature:9013-9882:-1:exon
subclass of: SO_0000010

69721228
type: Gene
SIO_000068: ncbigene

position:9013:-1
position: 9013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9882:-1
position: 9882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9013-9882:-1:exon

F0316_RS13915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13915
old locus tag: F0316_13915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014708273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MEETNKHELEAARTEAIKKDQCFSKGRLRDEFRMKPKPGAEPVAFYKNAYGGKFGVYKISDCVPMKARTTKPPSEKQKRARAILSIKAKLKSNEAKASCKAIQWLDENPLFLDSETTGIDDKAQILELAISDAQGSILLETRLRPTVPIDREAEDIHGITAESLANSPTWPEVSVQVQKILCGRSLIIFNADFDTRMLRQTSTAFGEPVEWIRELKTHCAMYLAADTFGPTNQYGSISLANAVDAAGIEWRGAAHGAVADTLTTVDLVQAIADIKRNLDQEIATLEKKI
SIO_010081: F0316_RS13915
subclass of: SO_0000673
so part of: F0316_RS13915
location: complement(9013..9882)
location: region:9013-9882:-1
so has part: feature:9013-9882:-1:exon

WP_149560579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9013-9882:-1:exon

F0316_RS13920
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13920
old locus tag: F0316_13920
so part of: sequence
location: 10138..10371
location: region:10138-10371:1
so has part: feature:10138-10371:1:exon
subclass of: SO_0000010

69721229
type: Gene
SIO_000068: ncbigene

position:10138:1
position: 10138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10371:1
position: 10371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10138-10371:1:exon

F0316_RS13920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13920
old locus tag: F0316_13920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIGLSKHPLIEDLYIVEYGDIKVYFNNVSYDHSEGCIIFERGDEVVTGRLAVIEQQFLIWKNALENMGIELEHLID
SIO_010081: F0316_RS13920
subclass of: SO_0000673
so part of: F0316_RS13920
location: 10138..10371
location: region:10138-10371:1
so has part: feature:10138-10371:1:exon

WP_149560580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10138-10371:1:exon

F0316_RS19875
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS19875
so part of: sequence
location: 10391..10537
location: region:10391-10537:1
so has part: feature:10391-10537:1:exon
subclass of: SO_0000010

69722308
type: Gene
SIO_000068: ncbigene

position:10391:1
position: 10391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10537:1
position: 10537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10391-10537:1:exon

F0316_RS19875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS19875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGKSEGLKVAVSVGSFVASMIVKDVSIVGALVLCAGAAGMLYQGLTS
SIO_010081: F0316_RS19875
subclass of: SO_0000673
so part of: F0316_RS19875
location: 10391..10537
location: region:10391-10537:1
so has part: feature:10391-10537:1:exon

WP_172626047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10391-10537:1:exon

F0316_RS13925
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13925
old locus tag: F0316_13925
so part of: sequence
location: 10559..10831
location: region:10559-10831:1
so has part: feature:10559-10831:1:exon
subclass of: SO_0000010

69721230
type: Gene
SIO_000068: ncbigene

position:10559:1
position: 10559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10831:1
position: 10831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10559-10831:1:exon

F0316_RS13925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13925
old locus tag: F0316_13925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGSEQSTKWKPHPLLDQAKNIGLWFMIIFISITGIAYLNALDKTILFVGSMFAVVSIFPAALYFAEVTRLASEREALKISKSNKSSVSN
SIO_010081: F0316_RS13925
subclass of: SO_0000673
so part of: F0316_RS13925
location: 10559..10831
location: region:10559-10831:1
so has part: feature:10559-10831:1:exon

WP_149560581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10559-10831:1:exon

F0316_RS13930
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13930
old locus tag: F0316_13930
so part of: sequence
location: 10842..11168
location: region:10842-11168:1
so has part: feature:10842-11168:1:exon
subclass of: SO_0000010

69721231
type: Gene
SIO_000068: ncbigene

position:10842:1
position: 10842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11168:1
position: 11168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10842-11168:1:exon

F0316_RS13930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13930
old locus tag: F0316_13930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQEILTVEIVSQRLKEVVSPDYVWPEMPTGWQLEFIVYPDGEVNMDFLHPVSCVFWSEDNDFLETPYTKVKRPITRGLLDECGVPYMTTFGHATVSDKPKESHLKSV
SIO_010081: F0316_RS13930
subclass of: SO_0000673
so part of: F0316_RS13930
location: 10842..11168
location: region:10842-11168:1
so has part: feature:10842-11168:1:exon

WP_149560582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10842-11168:1:exon

F0316_RS13935
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13935
old locus tag: F0316_13935
so part of: sequence
location: 11214..11630
location: region:11214-11630:1
so has part: feature:11214-11630:1:exon
subclass of: SO_0000010

69721232
type: Gene
SIO_000068: ncbigene

position:11214:1
position: 11214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11630:1
position: 11630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11214-11630:1:exon

F0316_RS13935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13935
old locus tag: F0316_13935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASAFFRVTHEYDIGDRSVYFSFDESLIDETAKELAVYLQFKVEHEVDDSIAVDNVTVVRFLELFGAKQLETKPNADFVTIDMYWDRERSCGDWFLENYKLLDTKYSDKTKDIVRAEKEAFSQYLNDNAHDVDLSEGE
SIO_010081: F0316_RS13935
subclass of: SO_0000673
so part of: F0316_RS13935
location: 11214..11630
location: region:11214-11630:1
so has part: feature:11214-11630:1:exon

WP_050549662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11214-11630:1:exon

F0316_RS13940
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13940
old locus tag: F0316_13940
so part of: sequence
location: 11633..11842
location: region:11633-11842:1
so has part: feature:11633-11842:1:exon
subclass of: SO_0000010

69721233
type: Gene
SIO_000068: ncbigene

position:11633:1
position: 11633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11842:1
position: 11842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11633-11842:1:exon

F0316_RS13940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13940
old locus tag: F0316_13940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSVELKDYELSPNVRNFCFALLIFFVVVIGASMFGLNVPQKIKDIALFVALPAGLLLNASRLSIWIKK
SIO_010081: F0316_RS13940
subclass of: SO_0000673
so part of: F0316_RS13940
location: 11633..11842
location: region:11633-11842:1
so has part: feature:11633-11842:1:exon

WP_149560583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11633-11842:1:exon

F0316_RS13945
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13945
old locus tag: F0316_13945
so part of: sequence
location: 11856..12233
location: region:11856-12233:1
so has part: feature:11856-12233:1:exon
subclass of: SO_0000010

69721234
type: Gene
SIO_000068: ncbigene

position:11856:1
position: 11856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12233:1
position: 12233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11856-12233:1:exon

F0316_RS13945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13945
old locus tag: F0316_13945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTPIPPSDESDYDFVSLLNKQTTKEHIQGLIDGAIARSRHLAKVKREHPELMKGSWVGENIEDKTMFLVSCKNHNRNCNKAFFYNYPSALFIVLHEFGESDDDFSKFTSGSLEEAVQRYNEIEV
SIO_010081: F0316_RS13945
subclass of: SO_0000673
so part of: F0316_RS13945
location: 11856..12233
location: region:11856-12233:1
so has part: feature:11856-12233:1:exon

WP_149560584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11856-12233:1:exon

F0316_RS13950
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13950
old locus tag: F0316_13950
so part of: sequence
location: 12660..13088
location: region:12660-13088:1
so has part: feature:12660-13088:1:exon
subclass of: SO_0000010

69721235
type: Gene
SIO_000068: ncbigene

position:12660:1
position: 12660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13088:1
position: 13088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12660-13088:1:exon

F0316_RS13950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13950
old locus tag: F0316_13950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQDKALKEQAYFSFSHYGSKDAAKSAANKFAEKLKKRRTARNERLNLDYNRLFDEKGFVRGMSFREKNGQLLLVAQATKHGKQKKNTRTLHNRTLYQAFTELSDWIMQIKDIDPTIEIKIDLKKSYRMLRNIQSNEIAKMSE
SIO_010081: F0316_RS13950
subclass of: SO_0000673
so part of: F0316_RS13950
location: 12660..13088
location: region:12660-13088:1
so has part: feature:12660-13088:1:exon

WP_149560585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12660-13088:1:exon

F0316_RS13955
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13955
old locus tag: F0316_13955
so part of: sequence
location: 13097..13708
location: region:13097-13708:1
so has part: feature:13097-13708:1:exon
subclass of: SO_0000010

69721236
type: Gene
SIO_000068: ncbigene

position:13097:1
position: 13097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13708:1
position: 13708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13097-13708:1:exon

F0316_RS13955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13955
old locus tag: F0316_13955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281283.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQIARIYLRVSTDEQDLERQERIIQDARAAGYYIAGVYREKASGARADRPELLRMIEDLQPGEVVIAEKIDRISRLPLPEAERLIATIQSKGAMLSVPGVVDLRDLVAGAEGVSKVVLEAIQDLLLRLSLQMARDDYEDRRERQRQGIEQAKKRGKYKGRKANLKTHELIVKLRPNHTIAETARLAGCSESQVKLIWAAHQKS
SIO_010081: F0316_RS13955
subclass of: SO_0000673
so part of: F0316_RS13955
location: 13097..13708
location: region:13097-13708:1
so has part: feature:13097-13708:1:exon

WP_149560619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13097-13708:1:exon

F0316_RS13960
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13960
old locus tag: F0316_13960
so part of: sequence
location: 13867..14151
location: region:13867-14151:1
so has part: feature:13867-14151:1:exon
subclass of: SO_0000010

69721237
type: Gene
SIO_000068: ncbigene

position:13867:1
position: 13867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14151:1
position: 14151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13867-14151:1:exon

F0316_RS13960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13960
old locus tag: F0316_13960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLAIFVLCFFVFCWFVIIKSNMKTKEIDNAPSCAVEPELSKLEKGLQREAQNFLNGKGCSKRNSKKVYKHVRKNGGYKSRVGLDSVPMTQQDD
SIO_010081: F0316_RS13960
subclass of: SO_0000673
so part of: F0316_RS13960
location: 13867..14151
location: region:13867-14151:1
so has part: feature:13867-14151:1:exon

WP_149560586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13867-14151:1:exon

F0316_RS13965
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13965
old locus tag: F0316_13965
so part of: sequence
location: 14521..14928
location: region:14521-14928:1
so has part: feature:14521-14928:1:exon
subclass of: SO_0000010

69721238
type: Gene
SIO_000068: ncbigene

position:14521:1
position: 14521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14928:1
position: 14928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14521-14928:1:exon

F0316_RS13965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13965
old locus tag: F0316_13965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNVNQSNQNVVDLPKLRGSKKQLGWAYKIRERFAERNPDSDKLMTELEAKFWIDNKSSLIGDEKLPKALPQLSGSENQIKWAFAIRSKFADVFPESALLRSQTDSKFWIENRRVFDFAVLGFKLAPSGDASQEE
SIO_010081: F0316_RS13965
subclass of: SO_0000673
so part of: F0316_RS13965
location: 14521..14928
location: region:14521-14928:1
so has part: feature:14521-14928:1:exon

WP_149560587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14521-14928:1:exon

F0316_RS13970
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13970
old locus tag: F0316_13970
so part of: sequence
location: 15002..15316
location: region:15002-15316:1
so has part: feature:15002-15316:1:exon
subclass of: SO_0000010

69721239
type: Gene
SIO_000068: ncbigene

position:15002:1
position: 15002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15316:1
position: 15316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15002-15316:1:exon

F0316_RS13970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13970
old locus tag: F0316_13970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASQKVNIETNEKPLDKNALDELIRYSGYDVHMILQYTHEEGKGVYLIYAKYHNGQVTRQVYTQRNTPRNFKDIQRAIDWGRRIGFRTITLTIDYGIYPDPDSK
SIO_010081: F0316_RS13970
subclass of: SO_0000673
so part of: F0316_RS13970
location: 15002..15316
location: region:15002-15316:1
so has part: feature:15002-15316:1:exon

WP_149560588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15002-15316:1:exon

F0316_RS13975
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13975
old locus tag: F0316_13975
so part of: sequence
location: 15541..15999
location: region:15541-15999:1
so has part: feature:15541-15999:1:exon
subclass of: SO_0000010

69721240
type: Gene
SIO_000068: ncbigene

position:15541:1
position: 15541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15999:1
position: 15999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15541-15999:1:exon

F0316_RS13975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13975
old locus tag: F0316_13975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMGSISRNSTGSVTVIYNRTHLDELDEQVIRYAIASFSHLVQRNQKLCFTGFRELIQQHYAAEGKIKLSLEVLQKAAIKNRYFCSFKYQNQQSGLIEYDEAVVEVERWSQVKPELERKINTEVTELDFKGISCVYRKGSFNYDVQRQEVQL
SIO_010081: F0316_RS13975
subclass of: SO_0000673
so part of: F0316_RS13975
location: 15541..15999
location: region:15541-15999:1
so has part: feature:15541-15999:1:exon

WP_172626048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15541-15999:1:exon

F0316_RS13980
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13980
old locus tag: F0316_13980
so part of: sequence
location: 15996..16436
location: region:15996-16436:1
so has part: feature:15996-16436:1:exon
subclass of: SO_0000010

69721241
type: Gene
SIO_000068: ncbigene

position:15996:1
position: 15996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16436:1
position: 16436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15996-16436:1:exon

F0316_RS13980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13980
old locus tag: F0316_13980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSPFQEGVDSLRTGNYGDSLKMSTINFTKDEWKFFWGKFRKFNQYPDWYPACKVSSFCSDVFNERQKEDPLLELNSYIGCINSAYRQPVTESDNEYQVTWVGMDGSYNEDEFSCLDDAKRHALSISEHGGHCITVSDDEGNDYGF
SIO_010081: F0316_RS13980
subclass of: SO_0000673
so part of: F0316_RS13980
location: 15996..16436
location: region:15996-16436:1
so has part: feature:15996-16436:1:exon

WP_149560590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15996-16436:1:exon

F0316_RS13985
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13985
old locus tag: F0316_13985
so part of: sequence
location: 16540..17316
location: region:16540-17316:1
so has part: feature:16540-17316:1:exon
subclass of: SO_0000010

69721242
type: Gene
SIO_000068: ncbigene

position:16540:1
position: 16540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17316:1
position: 17316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17316:1:exon

F0316_RS13985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13985
old locus tag: F0316_13985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MANNHTRAFTRLFNETARYHHRYEVFRDFVMMAGIAIQNAFLKSDELEQEYLGIVRRYEKDDAVRMSQLLAEVVMGLEAYPCDFLGSVFMDLELGSDRMGQFFTPFEVSKMMAMTLHGDMISALSKKPFITMQEPACGAGGMVIALAQTMYEQGFNPQKQLWASCIDIDPVAAMMAYVQLSLLHIPAEVVIGNSLSMKFTRVMRTPAHYLGFWDSKLRRHWSNDESEDTQTIEDALTAELQPMVVTQRGQMSLFDMTT
SIO_010081: F0316_RS13985
subclass of: SO_0000673
so part of: F0316_RS13985
location: 16540..17316
location: region:16540-17316:1
so has part: feature:16540-17316:1:exon

WP_149560591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17316:1:exon

F0316_RS13990
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13990
old locus tag: F0316_13990
so part of: sequence
location: 17669..17953
location: region:17669-17953:1
so has part: feature:17669-17953:1:exon
subclass of: SO_0000010

69721243
type: Gene
SIO_000068: ncbigene

position:17669:1
position: 17669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17953:1
position: 17953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17669-17953:1:exon

F0316_RS13990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13990
old locus tag: F0316_13990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAALIERSDQLVSLTDLTRRGSGIFERVAKAESDRLVVLRKAEPIAVVLNIASFEAMLNEMEELRTEVIALQRMSSGSLTDTISHSDLQHRLGN
SIO_010081: F0316_RS13990
subclass of: SO_0000673
so part of: F0316_RS13990
location: 17669..17953
location: region:17669-17953:1
so has part: feature:17669-17953:1:exon

WP_149560592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17669-17953:1:exon

F0316_RS19880
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS19880
so part of: sequence
location: complement(18191..18343)
location: region:18191-18343:-1
so has part: feature:18191-18343:-1:exon
subclass of: SO_0000010

69722309
type: Gene
SIO_000068: ncbigene

position:18191:-1
position: 18191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18343:-1
position: 18343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18191-18343:-1:exon

F0316_RS19880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS19880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRVPTLVTATKDSALAKVLTQFLKIIIDPPLGGFLLSGRHSQISRTPAG
SIO_010081: F0316_RS19880
subclass of: SO_0000673
so part of: F0316_RS19880
location: complement(18191..18343)
location: region:18191-18343:-1
so has part: feature:18191-18343:-1:exon

WP_172626049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18191-18343:-1:exon

F0316_RS13995
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS13995
old locus tag: F0316_14000
so part of: sequence
location: 19458..19793
location: region:19458-19793:1
so has part: feature:19458-19793:1:exon
subclass of: SO_0000010

69721244
type: Gene
SIO_000068: ncbigene

position:19458:1
position: 19458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19793:1
position: 19793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19458-19793:1:exon

F0316_RS13995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS13995
old locus tag: F0316_14000
inference: COORDINATES: protein motif:HMM:NF039183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5658 family protein
translation: MSLYNWMLLGYLLFVTLNVIDLFLTKVILENGGKEWNFIARFFYKHLGIKGIAWLKLVILSWFGIQCYFKVLDLYVIFYLNFTFTVVLYFMYKDAIQAGLKEKINPFSRNR
SIO_010081: F0316_RS13995
subclass of: SO_0000673
so part of: F0316_RS13995
location: 19458..19793
location: region:19458-19793:1
so has part: feature:19458-19793:1:exon

WP_149560593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19458-19793:1:exon

F0316_RS14000
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14000
old locus tag: F0316_14005
so part of: sequence
location: 20034..20960
location: region:20034-20960:1
so has part: feature:20034-20960:1:exon
subclass of: SO_0000010

69721245
type: Gene
SIO_000068: ncbigene

position:20034:1
position: 20034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20960:1
position: 20960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20034-20960:1:exon

F0316_RS14000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14000
old locus tag: F0316_14005
inference: COORDINATES: protein motif:HMM:NF023168.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MAISKQEIIDAAEKLAAEGVNPSMQAVRERLGGGSFATISPVLREWKENREATTVAVLEMPSDVKGALDRFGADLWKTASALATAQFEKLKDDTRNSVEAAKKERDEALEEIQRLETLILERDNHMSSVNAEVERMNSLLDDERKKNAALQQRNDDLQETVAGLKIDLKESREDGKQTLSKLDALRQEQTELSRMNGQLTTKVEALDKELMAMTEARNDSKAECVQLSDSLAAIQRAKEKIEIEKAKVVEQAEVKKAEMAGLLALNGEYKTQIDDLKAQLAGALSSEKKQTLRSGNKKTQPKPKPEEN
SIO_010081: F0316_RS14000
subclass of: SO_0000673
so part of: F0316_RS14000
location: 20034..20960
location: region:20034-20960:1
so has part: feature:20034-20960:1:exon

WP_149560594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20034-20960:1:exon

F0316_RS14005
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14005
old locus tag: F0316_14010
so part of: sequence
location: 20960..21280
location: region:20960-21280:1
so has part: feature:20960-21280:1:exon
subclass of: SO_0000010

69721246
type: Gene
SIO_000068: ncbigene

position:21280:1
position: 21280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20960-21280:1:exon

F0316_RS14005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14005
old locus tag: F0316_14010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003799880.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRHYFKTEYQGKDITVLMGYDRPLGGFFMVIEDAGQEDDEYIYSNLYEEITHPQSLEPYRAKLEQLGIFVPVEMLMEIEADGAALMGNKDVYHSIVNGTHQRVED
SIO_010081: F0316_RS14005
subclass of: SO_0000673
so part of: F0316_RS14005
location: 20960..21280
location: region:20960-21280:1
so has part: feature:20960-21280:1:exon

WP_149560595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20960-21280:1:exon

F0316_RS14010
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14010
old locus tag: F0316_14015
so part of: sequence
location: complement(21277..21480)
location: region:21277-21480:-1
so has part: feature:21277-21480:-1:exon
subclass of: SO_0000010

69721247
type: Gene
SIO_000068: ncbigene

position:21277:-1
position: 21277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21480:-1
position: 21480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21277-21480:-1:exon

F0316_RS14010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14010
old locus tag: F0316_14015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVQRIKDHDLMTWEKCGMKDIQKGDVFYTIDNGLKGPVLIAVDNAKQVPNPKNKTNLVWSVKSKPF
SIO_010081: F0316_RS14010
subclass of: SO_0000673
so part of: F0316_RS14010
location: complement(21277..21480)
location: region:21277-21480:-1
so has part: feature:21277-21480:-1:exon

WP_019281331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21277-21480:-1:exon

F0316_RS14015
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14015
old locus tag: F0316_14020
so part of: sequence
location: complement(21477..22028)
location: region:21477-22028:-1
so has part: feature:21477-22028:-1:exon
subclass of: SO_0000010

69721248
type: Gene
SIO_000068: ncbigene

position:21477:-1
position: 21477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22028:-1
position: 22028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21477-22028:-1:exon

F0316_RS14015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14015
old locus tag: F0316_14020
inference: COORDINATES: protein motif:HMM:NF037735.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD domain-containing protein
translation: MFSFPLFRRKRHKEADNSVILPVKATLPIKRDHSISTCCNSVVRQGPTLFYDVDGVLHPNDVGNLSCVNVLTSIIDKIPSLQLVMSSNWRETMDLEFFERIFPQKIKERTVGFTPVLDIYPYRRQREIEAFATHFSISRYLCIDDQEQLYEPGWHNLYIIDRSRGLDDKSKDEILDYFDGDAQ
SIO_010081: F0316_RS14015
subclass of: SO_0000673
so part of: F0316_RS14015
location: complement(21477..22028)
location: region:21477-22028:-1
so has part: feature:21477-22028:-1:exon

WP_149560596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21477-22028:-1:exon

F0316_RS14020
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: topA
locus tag: F0316_RS14020
old locus tag: F0316_14025
so part of: sequence
location: complement(22029..24173)
location: region:22029-24173:-1
so has part: feature:22029-24173:-1:exon
subclass of: SO_0000010

69721249
type: Gene
SIO_000068: ncbigene

position:22029:-1
position: 22029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24173:-1
position: 24173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22029-24173:-1:exon

F0316_RS14020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: topA
locus tag: F0316_RS14020
old locus tag: F0316_14025
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020406883.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I DNA topoisomerase
translation: MKLMIVESPNKVKKIKGYLGEGWRVSASVGHIRDLPDKEMGIEPPDFKPKYVISSDKKKVVSELKKLASNATEVYLATDPDREGEAIAFHLKMCLGLNNPKRVTFTEITKSAITKAIQNTRTIDNHLVSAQESRRVLDRIVGYHISPLLSQQAGIPLSAGRVQSPAVKLTVLREREIREFRKRNYYVVQILLPNGLTATLDAKEWCEDGKHIFDKAVAEAIADTKSVFVSKSVVEDKESKPRAPFTTSTLQQAASSILKFTPANTMKYAQALFEQGAISYHRTDTPNLSEDSFNLVKDYLSSLGNDTQEVQLKWATKDSAQEAHEAIRPTDPAADNCGETDQQRKLYQLIRERTLASVMPPAIDIVTSIEFTSDEEITVGDTVSQAKFTVSGKIEKYPGWRSICEIEKAGSSNNELSATVEEGETFSVDSKILTKTTEPPSRFTEATLIKALEKLGIGRPSTYASIMENIKSRGYIVIGDGKKKSDNKIRPTETGETLVDALDAMTFMNLDYTRILENQLDKIASGQSNYFQLVKSVYATITKEAQHIKIESLVETAECPQCGEAVKRLKSKKRGVGHFWIHISEDHNCEDFLDDDNGIPVYREKYDSPVMDCPGCGNEIKRLKKKDTEDEYFWVHSDEKHAKNCVKFIKDEEGTPVVVKDETSECPGCGKPLNRRYSKAKDFHFWVHQIQSHEKGCHKFINDEDGQPVIEQGA
SIO_010081: F0316_RS14020
subclass of: SO_0000673
so part of: F0316_RS14020
location: complement(22029..24173)
location: region:22029-24173:-1
so has part: feature:22029-24173:-1:exon

WP_149560597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22029-24173:-1:exon

F0316_RS14025
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14025
old locus tag: F0316_14030
so part of: sequence
location: 24322..25206
location: region:24322-25206:1
so has part: feature:24322-25206:1:exon
subclass of: SO_0000010

69721250
type: Gene
SIO_000068: ncbigene

position:24322:1
position: 24322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25206:1
position: 25206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24322-25206:1:exon

F0316_RS14025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14025
old locus tag: F0316_14030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281328.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MEILEHIKLVDLTPDPNQPRKDFDPEKIEELANSIAAVGVIQPIRVRRNPDANMGQPAFMIIAGERRWQASQKAGKETIPAVIIEDESALTDDAIYAHQLTENLHRQDLNPVEKAEFINGRIEFLKSQGINNAVEQAAQELGVSPSWVSKNTAILKYEPEIRALARDGKLRDYSLLKKISGLRADKKQRAIELIENGEFNAKEFFARKRYDKKKDEQNEEGGSDPVSQAKSTSSDNQKPISIKLQLSQSELIKLIDKTGYASMLDRHDPEWRKANQVIMKSYVEKFKEWVVETE
SIO_010081: F0316_RS14025
subclass of: SO_0000673
so part of: F0316_RS14025
location: 24322..25206
location: region:24322-25206:1
so has part: feature:24322-25206:1:exon

WP_042988648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24322-25206:1:exon

F0316_RS14030
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14030
old locus tag: F0316_14035
so part of: sequence
location: complement(25285..27696)
location: region:25285-27696:-1
so has part: feature:25285-27696:-1:exon
subclass of: SO_0000010

69721251
type: Gene
SIO_000068: ncbigene

position:25285:-1
position: 25285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27696:-1
position: 27696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25285-27696:-1:exon

F0316_RS14030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14030
old locus tag: F0316_14035
inference: COORDINATES: protein motif:HMM:NF024108.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraM recognition domain-containing protein
translation: MPETSPEYAVLNWFGQVNYALMEWTNVYWWPVLAGMIFIGCLIGMSPLSTHHEQPFHQILFVWIRKIIIWLGVGLFVLPFVMLYLYDMTMQNQLADSQQAWLRWFVNLAIQNWFVIFSAATSGWLLRFMYKRYTLPLWSAMLRRLRNKQTEEKPTDIREEISRFEAKDFLPHKHYKEDFVLVGLDEKDKPIHIPTSTWYETNMQVVGPTRYGKGVIMGAIMDQAIRRGDCLFYIDPKKDKFAPHVMYQACVDSGRKFYYVTLHDEGIGKWAPFVGGSERDGLTRLEAAFGLEFTGNPGTDYYKSQERKELERAFKKTRNIEGLKNLMEETDANRINAELARWSNIESLCPKKGGGFSIGKALKEGAVVYVQGSLDDSVVKTATKTFITELIQEARQLDKERQTHLTAVIDEVSFLASKTLAQALATAVGFRVNFVLAYQSQNDLLNIDDQTVNPKYVYQSINVNSQIKAVYGGADFETAEWAANLSGTITKEVTKMEKTDISATGGETWEQQRTVGTLEENYINTNMVLTLPPRVCVFVQPRHLASICFSSFVPVKDMKILDDYLEHKDKVYNAPVTTSENDNEQEPDSPGIETVPEEFSKPTKAEPTPVSQAKPKNDSSNVKHNEDNKDDSVVLPFREKKEAKKQAEANSVSQAKSKQTDAIEDTDFFEDQAKQPKHNTKSEKTDKPSISQSPELQKNEQSSTQENELSEEAIKKRERNRARKAKQKAKKNIEKENSENNIQTDKPVVSQAKVVANKDEEIKADTVELSDDFAMDFGFGELALQSDDKTMSLLNDLDEEEEK
SIO_010081: F0316_RS14030
subclass of: SO_0000673
so part of: F0316_RS14030
location: complement(25285..27696)
location: region:25285-27696:-1
so has part: feature:25285-27696:-1:exon

WP_149560598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25285-27696:-1:exon

F0316_RS14035
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14035
old locus tag: F0316_14040
so part of: sequence
location: 28736..29497
location: region:28736-29497:1
so has part: feature:28736-29497:1:exon
subclass of: SO_0000010

69721252
type: Gene
SIO_000068: ncbigene

position:28736:1
position: 28736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29497:1
position: 29497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28736-29497:1:exon

F0316_RS14035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14035
old locus tag: F0316_14040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIEQRDTSLKYPKAIKEEKTRLVLDWLLEFRFSSIDLLAKRIGSNSVNSNRFFNSLLKDGVIQAFKNVHTKNERYVMLTSAGLSYLEVLGRDISKSTTRVQHLGRYSQIIHDMAVQHAVLNRIEQFKEVIWDRHIDLPEHQEKPDAILLSPKGYWVALEYERWRKDTKRIFISFLNHSSALSAKHYAGVLYLFDREADYKHYQKLFDSAEWPRYKRETKSGKIKTLDTTFKPDDVKNLRKCFIFSHEPVEHE
SIO_010081: F0316_RS14035
subclass of: SO_0000673
so part of: F0316_RS14035
location: 28736..29497
location: region:28736-29497:1
so has part: feature:28736-29497:1:exon

WP_149560599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28736-29497:1:exon

F0316_RS14040
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14040
old locus tag: F0316_14045
so part of: sequence
location: 29567..30064
location: region:29567-30064:1
so has part: feature:29567-30064:1:exon
subclass of: SO_0000010

69721253
type: Gene
SIO_000068: ncbigene

position:29567:1
position: 29567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30064:1
position: 30064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29567-30064:1:exon

F0316_RS14040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14040
old locus tag: F0316_14045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008500008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLRVLYASCIFPLVFSGGLTASEDPRLKNDTENCWVEAGVKYQVDPWLLYSIAEQESSLNPLAINGNSNGTRDVGLMQINSFWLPELEKYGISEQNLFDPCVSIHVGAWVLSQSIQVFGNNWRAVGAYNAGTGKSENKELLRQKYAERVYKRYLRLSNSGVHESP
SIO_010081: F0316_RS14040
subclass of: SO_0000673
so part of: F0316_RS14040
location: 29567..30064
location: region:29567-30064:1
so has part: feature:29567-30064:1:exon

WP_149560600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29567-30064:1:exon

F0316_RS14045
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14045
old locus tag: F0316_14050
so part of: sequence
location: 30084..30650
location: region:30084-30650:1
so has part: feature:30084-30650:1:exon
subclass of: SO_0000010

69721254
type: Gene
SIO_000068: ncbigene

position:30084:1
position: 30084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30650:1
position: 30650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30084-30650:1:exon

F0316_RS14045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14045
old locus tag: F0316_14050
inference: COORDINATES: protein motif:HMM:NF012894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MGVKQVPGTSEEHPSEFVFCDMNGGAWGCEKTTPKTPVSYILVDSGDDKPISDLVKGAIKEISGSSAQSVENMAISAISELEPLEIVFFDFDSAELNAKAKITLLNILPEISGKKILINGYTDSVGSESYNKQLGLSRAQSVKDFFIKAKSDAAEIETFGNGLCCYLEPNRTEEQRAKNRRVEIFVVN
SIO_010081: F0316_RS14045
subclass of: SO_0000673
so part of: F0316_RS14045
location: 30084..30650
location: region:30084-30650:1
so has part: feature:30084-30650:1:exon

WP_172626050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30084-30650:1:exon

F0316_RS14050
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14050
old locus tag: F0316_14055
so part of: sequence
location: 30735..31079
location: region:30735-31079:1
so has part: feature:30735-31079:1:exon
subclass of: SO_0000010

69721255
type: Gene
SIO_000068: ncbigene

position:30735:1
position: 30735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31079:1
position: 31079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30735-31079:1:exon

F0316_RS14050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14050
old locus tag: F0316_14055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
translation: MKNAVGLAKDGRFKGVLSAFLVLSLAFLPEIALAASVGVGGGTGGTEFQAFYNFIYAAATGYLGRSIAIVGGLIGLGIGAGTGKALPAVIGVFLAIFGVLGPTIVNALFTSATI
SIO_010081: F0316_RS14050
subclass of: SO_0000673
so part of: F0316_RS14050
location: 30735..31079
location: region:30735-31079:1
so has part: feature:30735-31079:1:exon

WP_149560602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30735-31079:1:exon

F0316_RS14055
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: traL
locus tag: F0316_RS14055
old locus tag: F0316_14060
so part of: sequence
location: 31141..31431
location: region:31141-31431:1
so has part: feature:31141-31431:1:exon
subclass of: SO_0000010

69721256
type: Gene
SIO_000068: ncbigene

position:31141:1
position: 31141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31431:1
position: 31431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31141-31431:1:exon

F0316_RS14055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: traL
locus tag: F0316_RS14055
old locus tag: F0316_14060
inference: COORDINATES: protein motif:HMM:NF018836.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraL
translation: MEEDDYWIPRNLDAPPLMFMWEADSAILVIFWLIVGGVLNMFLLGVVLAITFGRGYAYLKEEGGRGLLMKILFWYTPSELWLSKRIPSHIREYIGG
SIO_010081: F0316_RS14055
subclass of: SO_0000673
so part of: F0316_RS14055
location: 31141..31431
location: region:31141-31431:1
so has part: feature:31141-31431:1:exon

WP_149560603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31141-31431:1:exon

F0316_RS14060
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: traE
locus tag: F0316_RS14060
old locus tag: F0316_14065
so part of: sequence
location: 31424..32089
location: region:31424-32089:1
so has part: feature:31424-32089:1:exon
subclass of: SO_0000010

69721257
type: Gene
SIO_000068: ncbigene

position:31424:1
position: 31424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32089:1
position: 32089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31424-32089:1:exon

F0316_RS14060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: traE
locus tag: F0316_RS14060
old locus tag: F0316_14065
inference: COORDINATES: protein motif:HMM:TIGR02761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraE
translation: MDKKKYNSTVINANYKASLWMGISALLLISNVMLSGFVVTADTSEKTVIVPPQIDKPFSIQGNNVSPEYIEQMARYFSQLLLTYHKQNAQSQFDTVLHYTDPSVYGEMKTRFSLDFDRISRNDINSVFYLMGIHIKKNVAIITGELNGFIGSHLVSKKQKTYELRFNYNGKLTITGFNEMQKDSVGAYNIVKPDDEILIEAQPESATFTESFGSEVKNDNE
SIO_010081: F0316_RS14060
subclass of: SO_0000673
so part of: F0316_RS14060
location: 31424..32089
location: region:31424-32089:1
so has part: feature:31424-32089:1:exon

WP_172626051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31424-32089:1:exon

F0316_RS14065
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14065
old locus tag: F0316_14070
so part of: sequence
location: 32076..32855
location: region:32076-32855:1
so has part: feature:32076-32855:1:exon
subclass of: SO_0000010

69721258
type: Gene
SIO_000068: ncbigene

position:32076:1
position: 32076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32855:1
position: 32855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32855:1:exon

F0316_RS14065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14065
old locus tag: F0316_14070
inference: COORDINATES: protein motif:HMM:NF018311.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system secretin TraK
translation: MTMNDTKVNYPFGYISTSSLWMLVKILVITVILSFANVAQAAQEFRVKDGDTISVKISSRELTRITVDGVGRLDKVWGAAGVLEINPDKEKGEIFVRPLMSAPTAFSFFVRDDLGATYTIVAKQHDIPSETVLLKPAAPRKSVGRGSEYRSTPYMERVKRLMKGMALGEEVAGYTFDDADKKVPLWAETNITLRRVYTGYDLLGEIYTLENISGKEMVFHEREFLDFGDNVQAVALEQLSLAKGETTFIYVVRQSLEAK
SIO_010081: F0316_RS14065
subclass of: SO_0000673
so part of: F0316_RS14065
location: 32076..32855
location: region:32076-32855:1
so has part: feature:32076-32855:1:exon

WP_149560605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32855:1:exon

F0316_RS14070
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14070
old locus tag: F0316_14075
so part of: sequence
location: 32855..34105
location: region:32855-34105:1
so has part: feature:32855-34105:1:exon
subclass of: SO_0000010

69721259
type: Gene
SIO_000068: ncbigene

position:34105:1
position: 34105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32855-34105:1:exon

F0316_RS14070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14070
old locus tag: F0316_14075
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MEAPSKTKRKQMMIAVGGFSAFILLMMFGMWLSDPNRGKPTPMEVQAEKAQEVMRDFTAKSSGSVTAEETWIALSEKQIKELQTENKILRDRLDDLAKNFEKGNPIQGTPVMTASLPSVSLPPAPSSVIPPAPVNEQTPQTGEITQRFVNNSLPPPPQPSNVNPNGQQINQNGQPISTIQVISLSDEPSNKGEGVKSKNVSHYLPTGSFATAVLLSGMDAPTGGQSKSQPVPVLLRVMDAGQLPNFWNSDIDNCHVTGAAHGDISSERAHIRLENMTCVLVNGEVIEEQIKGYVAGEDGKAGLRGRLVSKQGSLIAKSLLAGVASGIGGSISQQYQQVSTSALGNVTTIDPNKALESGLATGTSNALEKIADFYIARANETYPIIEVDANRIGEIILLGGTDFGKDLIGNTREHRE
SIO_010081: F0316_RS14070
subclass of: SO_0000673
so part of: F0316_RS14070
location: 32855..34105
location: region:32855-34105:1
so has part: feature:32855-34105:1:exon

WP_149560606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32855-34105:1:exon

F0316_RS14075
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14075
old locus tag: F0316_14080
so part of: sequence
location: 34102..34485
location: region:34102-34485:1
so has part: feature:34102-34485:1:exon
subclass of: SO_0000010

69721260
type: Gene
SIO_000068: ncbigene

position:34102:1
position: 34102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34485:1
position: 34485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34102-34485:1:exon

F0316_RS14075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14075
old locus tag: F0316_14080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraV family lipoprotein
translation: MKKIILVGLLSVLSGCSASYTCGQFPQSGCQPVSTVYDRTNDGFHDYRRTLYDEEKKSKSGRKEENVAVNVGQAHRTLNYSTPGDPILTKPVTLRILFNSWQDNDKDLNAGGFVYIRLRDSEWVVNK
SIO_010081: F0316_RS14075
subclass of: SO_0000673
so part of: F0316_RS14075
location: 34102..34485
location: region:34102-34485:1
so has part: feature:34102-34485:1:exon

WP_149560607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34102-34485:1:exon

F0316_RS14080
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: traC
locus tag: F0316_RS14080
old locus tag: F0316_14085
so part of: sequence
location: 34467..37124
location: region:34467-37124:1
so has part: feature:34467-37124:1:exon
subclass of: SO_0000010

69721261
type: Gene
SIO_000068: ncbigene

position:34467:1
position: 34467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37124:1
position: 37124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34467-37124:1:exon

F0316_RS14080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: traC
locus tag: F0316_RS14080
old locus tag: F0316_14085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein TraC
translation: MGSQQITLSDRYHAIKRKLTDKIKSSLVNDVPPGVHLKNGANTPTLAVMKSFSERYPLASILPYEAYDDETGIYYNRDTVGFMLYASPATGVSPTELKTLNGFFNQSHKSDTVIQVSVIADPNVEPILNRWAETKGNARDKAIGDIFETLANNRVDYMQKGKWESLFTDQAFLLRNLHLVVSYTIPVPKGLTAVDVADDDVQQLIRTREAAIGTLRSAKIYSQNMNPDLFINIMNGLLNPSKDEQPRLYYDDNNLIASQMVDQDTMALFDSGASSLIHKEEAFSILPYHVRQFPQTWPGYKNGQLIGSFTNNILRIPCPFIATLTVNAADQVSAKGKVKRKSIRATQMADSPTGKYVPQWRERKVDWDYTAKKVDNGNKLMDAFYQIVLFAPQGREQECEQALKSVYESLGWVISKSRYTPIHSLLGALPMGLCQESKRALQVFGHFSSRLSWTCTNIAPWIGEWKGTKTPMMLFNGRRGQVTYFDPFDNDKGNYNMSCSATSGSGKSFFTQEWVFSCLGYGGRAFIIDAGHSYKNLCRLLKGTYIDFGSGRPNVNPFTKVFSPENIERVEKLAAEQPGEYSVDDYINDMMPMLKLLLSVMASPNAELPPKLSACLEIALQAAIKEHREKTTVTKVAKKCLEQKNELGETLDYAKDVALMLHSYTDEGMFGRYFEGDNNIDLDNPFVVLELDALNAKGDLQSVVLLIMMMQINQVMYLSGNKKQRKLCIIDEAWRLLGRGRAGQFIEEGYRVARKHGGSFMTITQKISDYYASETAKAAYANSDFKVYLRQDPGELAEAESKGHISNSSGKVDVIRSLETIQGKYSELAVDSPNGLAALRFTVDPITEKLYSTKAEEVDFIREAEAKGIHIFDAVQQLISRGGSR
SIO_010081: F0316_RS14080
subclass of: SO_0000673
so part of: F0316_RS14080
location: 34467..37124
location: region:34467-37124:1
so has part: feature:34467-37124:1:exon

WP_149560608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34467-37124:1:exon

F0316_RS14085
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14085
old locus tag: F0316_14090
so part of: sequence
location: 37279..37611
location: region:37279-37611:1
so has part: feature:37279-37611:1:exon
subclass of: SO_0000010

69721262
type: Gene
SIO_000068: ncbigene

position:37279:1
position: 37279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37611:1
position: 37611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37279-37611:1:exon

F0316_RS14085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14085
old locus tag: F0316_14090
inference: COORDINATES: protein motif:HMM:NF021213.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI F-type domain-containing protein
translation: MKNIIVSLIGGLLGAMIFTVANNYWYSRPIAVVKLDEIIASHLKEYGEKELTDDERKLVSESFAQSLDLVIKRIGEEQRVTLLVAPAVVTDVPDYTEFVKAEIRRSMNGK
SIO_010081: F0316_RS14085
subclass of: SO_0000673
so part of: F0316_RS14085
location: 37279..37611
location: region:37279-37611:1
so has part: feature:37279-37611:1:exon

WP_149560609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37279-37611:1:exon

F0316_RS14090
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14090
old locus tag: F0316_14095
so part of: sequence
location: 37601..38113
location: region:37601-38113:1
so has part: feature:37601-38113:1:exon
subclass of: SO_0000010

69721263
type: Gene
SIO_000068: ncbigene

position:37601:1
position: 37601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38113:1
position: 38113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37601-38113:1:exon

F0316_RS14090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14090
old locus tag: F0316_14095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S26 family signal peptidase
translation: MESNSNVTDDYRLKRFRKNLFRWLCGVVFIVLLGWSASPFVKIGFNGTNSVDGYLFLIVKGEIPKKGELVAFWPPENDFYQNIWFVKYMKGGAGDEVVRTGQSFYINSEYIGDAKTQSNSGVALQPSNGGVLPEGYYFVWTPHEDSFDSRYEQIGWIPEKSIIGRAFRIL
SIO_010081: F0316_RS14090
subclass of: SO_0000673
so part of: F0316_RS14090
location: 37601..38113
location: region:37601-38113:1
so has part: feature:37601-38113:1:exon

WP_149560610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37601-38113:1:exon

F0316_RS14095
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: traW
locus tag: F0316_RS14095
old locus tag: F0316_14100
so part of: sequence
location: 38028..38681
location: region:38028-38681:1
so has part: feature:38028-38681:1:exon
subclass of: SO_0000010

69721264
type: Gene
SIO_000068: ncbigene

position:38028:1
position: 38028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38681:1
position: 38681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38028-38681:1:exon

F0316_RS14095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: traW
locus tag: F0316_RS14095
old locus tag: F0316_14100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system protein TraW
translation: MKTVLIVVTNKLAGYLKKASLVVLFVSCNAFTSDLGVIGTTYPIIERDLIDVIHERIEEKTKSGELDELHQGMKERSKEYASKPPGVGLPRAQVYRAVEVNPVYTLEEDIVDAEGKVLFKAGTKVNPLEIRPLTKTLCFIDGDDSEQVTWLETYCAQDPRNKLILVNGNFQMLSKQTGLRLYFDQRGYLVERFGITAVPAVIRQSGKVLYVEEFPIN
SIO_010081: F0316_RS14095
subclass of: SO_0000673
so part of: F0316_RS14095
location: 38028..38681
location: region:38028-38681:1
so has part: feature:38028-38681:1:exon

WP_233447425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38028-38681:1:exon

F0316_RS14100
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14100
old locus tag: F0316_14105
so part of: sequence
location: 38656..39678
location: region:38656-39678:1
so has part: feature:38656-39678:1:exon
subclass of: SO_0000010

69721265
type: Gene
SIO_000068: ncbigene

position:38656:1
position: 38656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39678:1
position: 39678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38656-39678:1:exon

F0316_RS14100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14100
old locus tag: F0316_14105
inference: COORDINATES: protein motif:HMM:NF010297.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilus assembly protein TraU
translation: MLKNFRLIKQSVFLSLVFSSLNLWAESGSSVGPCEGRFPNPVTDICWYCMFPINIGGISLSAPGQVNNGDPSPPLICSCPAPPPIFIRYGIGIGFWEPARVAEVVRTPMCSPTLGGTTIGSINAPGGTHENEPGGQDTAFYHVHWIQYPVLNWLGMAITNGACFINESFDMAYLSEFDPLWDDDELSFVLNPEATLFANPIAQAACVADSVKASVSMFGLDPLFWCSGSQGSLYPLSGTHANHIGGVDSSLALTHTMIFKLHRELLAQDTSTYGAMCGGVPQPILRKNQYKQNMMYPVPQNKFGFGLGVPSAIWGAGREFPYKGEDFTYLIWRKRTCCAF
SIO_010081: F0316_RS14100
subclass of: SO_0000673
so part of: F0316_RS14100
location: 38656..39678
location: region:38656-39678:1
so has part: feature:38656-39678:1:exon

WP_149560611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38656-39678:1:exon

F0316_RS14105
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: trbC
locus tag: F0316_RS14105
old locus tag: F0316_14110
so part of: sequence
location: 39663..40400
location: region:39663-40400:1
so has part: feature:39663-40400:1:exon
subclass of: SO_0000010

69721266
type: Gene
SIO_000068: ncbigene

position:39663:1
position: 39663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40400:1
position: 40400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39663-40400:1:exon

F0316_RS14105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: trbC
locus tag: F0316_RS14105
old locus tag: F0316_14110
inference: COORDINATES: protein motif:HMM:TIGR02742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TrbC
translation: MLRVLIIVVGFMVTLSHAEQPKYKEPDAKLIQQQKEGMRNALKDSDQIIKDGTLDKILSQERGKLNAMPQSSPGLNVNMPEFLEHERDDRYLAKALSAGQSINGNESSSVEAKYPIVLVSLSMPESQIKALIQEAFDIRAAIAVRGLIDDDFEKTIFKLKELAGDKDGGILIDPTLFRRFEVTAVPTFVLPLEPLKLCTDEGCPIPNHVKATGSSTFQYFLDLVARTGDANAKAEANAWLAKYGE
SIO_010081: F0316_RS14105
subclass of: SO_0000673
so part of: F0316_RS14105
location: 39663..40400
location: region:39663-40400:1
so has part: feature:39663-40400:1:exon

WP_149560612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39663-40400:1:exon

F0316_RS14110
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14110
old locus tag: F0316_14115
so part of: sequence
location: 40390..42363
location: region:40390-42363:1
so has part: feature:40390-42363:1:exon
subclass of: SO_0000010

69721267
type: Gene
SIO_000068: ncbigene

position:40390:1
position: 40390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42363:1
position: 42363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40390-42363:1:exon

F0316_RS14110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14110
old locus tag: F0316_14115
inference: COORDINATES: protein motif:HMM:NF018666.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraN
translation: MENNKMKRAGAILIAAVCSCSSLVFAGNTSQANSDGKSFADSINNSKIKDLGKSVDPNTIPNYQGADVPEKQYYNSGLNIENEAQNHAASDPNAQYINSSRISRPQITINSQTDPLFKRHEDITLKANSLTNTYSGCVDLPVGTKDVTKYEDKTCNVSGRQDTINYTCKRNLEVSCSNPDAGLPDPFVDSDFVRSGDAGMYWGSNGHIFWYGNPSTNNRHHGCKWYENTIKFYVSDVNTIPEFVLEQVAYDDWLFIKVNGHLGFQAVGGTQYTGFDLGGKFPGNYSCEQHGVRTFNINLNAKPKLKVGWNTISIRNLVGGGGNAFLKFRIHRVKGCTQKSSYSFSCPSGETHTNGSLVSSACTVGGGTRYIKGFPIYKSCWQWDMNYTRKSDPYFVKDAMCGQLESEGCGQTSTKCTNHNGLFCENQVVTYSCPYQTAARHVSLCGSQLVCPDGQCTSEFGQEYDPSTDAFKKAATALAVADEISKQLDVDNLTVFKGVAKACDKKAAGFSNCCKDSGWGADIGLASCSSEEKELGLMKEAKRVHFIGDYCAEKVLGACIRKKYVYCTYPSKLSRILMEQGNAQLGRGYGGPKDPDCRGFTIKELENLNFDGMDLSEFYSDVMSNAVNGSTPNATGAAQSIQEKLNARYPQLSEGGK
SIO_010081: F0316_RS14110
subclass of: SO_0000673
so part of: F0316_RS14110
location: 40390..42363
location: region:40390-42363:1
so has part: feature:40390-42363:1:exon

WP_149560613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40390-42363:1:exon

F0316_RS14115
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14115
old locus tag: F0316_14120
so part of: sequence
location: 42363..43199
location: region:42363-43199:1
so has part: feature:42363-43199:1:exon
subclass of: SO_0000010

69721268
type: Gene
SIO_000068: ncbigene

position:43199:1
position: 43199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42363-43199:1:exon

F0316_RS14115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14115
old locus tag: F0316_14120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraF
translation: MRYKCLVFLSLVFSTFAIADSPSSDVQHAESSKAYYNDRERGWFWYEDPVDEKKKEPVKPQVQSASPSQPVLSPREILKKQGEQWEDALATAILEPSRENYQNYLAMTAQIQQQSQDFATGFKQAIWVTPEYDYTLQKPRTTQAIVANNQEELRLNEQELYRLSQENGLIFFFRSDCQFCHRFAPVLKKFSEQYGFTIIPVSLDGGGLPEYQYPKRNYDLGRKLNVEVVPALFMVNPDSNSVSTVGYGYSDWSTLTQKVLFAAQQLEGTAKIKVGDVR
SIO_010081: F0316_RS14115
subclass of: SO_0000673
so part of: F0316_RS14115
location: 42363..43199
location: region:42363-43199:1
so has part: feature:42363-43199:1:exon

WP_149560614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42363-43199:1:exon

F0316_RS14120
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14120
old locus tag: F0316_14125
so part of: sequence
location: 43196..44638
location: region:43196-44638:1
so has part: feature:43196-44638:1:exon
subclass of: SO_0000010

69721269
type: Gene
SIO_000068: ncbigene

position:43196:1
position: 43196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44638:1
position: 44638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43196-44638:1:exon

F0316_RS14120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14120
old locus tag: F0316_14125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraH
translation: MKNAFTTLALAIGLTLPSVSSADTAAKVNSWFSNMNYATVTNPGVYEGQSARYATLGGVSTRAPITQPFNFINVQTPKFSAGCGGIDFFAGGFSAIDANQFTENLRAIGQNSQSLAFMLAIQIVSPQLSGVMEDINTWAQKLNQMNMDSCQAATSLVGGTMDFFGAKEGNCTIKRMQDFGEDWSTANYACTTGGSIKPTEASGGDANKIDFVKGNLAWYVLMQDPFFQSDTEFAEVIMNLTGTVIISDAGSSDDAPSDVRIIRPAIIGDVQKERFKNIYTALLLGNKASNNLQVYRCSGGASSNPNSCTAMTGSLQTIAPSWTGLYSRIETMVASIIDKIYTDTPLSNEEKGLVSSTTIPLYRYLAATAAYFPRGSDVSRLTNDYTKLIAEDILLRSLNAIIEKVEQQSAVLKGGMSEANRMKDFREDLDGVLRGLSEMRKKNEFNVEQYFAMQQRIQLYEKALMSRLGSGMITSAMWGQ
SIO_010081: F0316_RS14120
subclass of: SO_0000673
so part of: F0316_RS14120
location: 43196..44638
location: region:43196-44638:1
so has part: feature:43196-44638:1:exon

WP_149560615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43196-44638:1:exon

F0316_RS14125
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14125
old locus tag: F0316_14130
so part of: sequence
location: 44642..47461
location: region:44642-47461:1
so has part: feature:44642-47461:1:exon
subclass of: SO_0000010

69721270
type: Gene
SIO_000068: ncbigene

position:44642:1
position: 44642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47461:1
position: 47461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44642-47461:1:exon

F0316_RS14125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14125
old locus tag: F0316_14130
inference: COORDINATES: protein motif:HMM:NF019530.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraG N-terminal domain-containing protein
translation: MWEIYSYGGGDFLRMIFTGIAQIFGNSDYKAALQSAALIGFIGVLIYAAFQKGQLDVKWVVGIIMTVMILIVPKVNVIITDRVVPANSAVVGNVPLGLGLTSTAFSKVGDWLTRSFETVFSLPNEVKYSGNGLLFASNLVEESTRFEITTPRVSSNFAEFWKSCVYYDLSLGLYSWDQLISSSNLMGFLASNTSQTRSFTYQDSSGGKSIIGCRTGLSNQLTNDLNSEISNSTNIHGVRLVPNESTMNVSVSRFASSLPVAYQYLTGMSMNNARIIGQNVLANSLKRGLTNFANEADAAAAAQDFALARAEQERRTTFTVMGKLAKRMLPIMRNIFEAFIYAIFPIVMLLAMLPVAGKVLMGYVKALFWINMWAPLYAVLHFAMSYYGQNAASAAVVQAGSGFPTGLSVMTNTGLGHVLSDYAAIAGYLSLSIPMIAWMMVSQSGAMMAGLAGRMMQSYDNPVSKAADEATTGNQQLGNVRYETESAFQSNTAPSDMRGGMTTGDGVGNTQRIAPDGGVYSDITSSNTPLGINYGSMATSSARQSLSAATAKEEATSLKTVESNAALRSEIDSVVDRVTGGQSGSQSIGASERQSITQAMQNTERVMEQFAERNGLSLQNAKAISAEIYSKIEAGGEFGFAEVKAGAAARAGVEERMITQDDYTKVREMLSSQEYSEAIRAEGAAVRDATASIQVGTQDGSEHGLSAVLSNQYQSTKEHSEAVRGVEQASKQLDYAQSVSAQIQAKGDDAFFSWLSSEKGMSDSEVRQLITEANHGDLDAMKYRDAYAQEYVSSELSNFSQNQISQDALNKGTFNGESGQFAPVDGVAHAMANSSANDINNNFNSDRTTVSLRDYDNYQAVQAVKTAPSKSEVNETIASIRSDAENTLASPENAVMTPIDSDNVIPIQTKQAEVRQEVEEQQDRGVIDRAVDGVKSWFN
SIO_010081: F0316_RS14125
subclass of: SO_0000673
so part of: F0316_RS14125
location: 44642..47461
location: region:44642-47461:1
so has part: feature:44642-47461:1:exon

WP_149560616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44642-47461:1:exon

F0316_RS14130
type: Gene
subclass of: SO_0000704
RO_0002162: 666
gene: radC
locus tag: F0316_RS14130
old locus tag: F0316_14135
so part of: sequence
location: 47695..48183
location: region:47695-48183:1
so has part: feature:47695-48183:1:exon
subclass of: SO_0000010

69721271
type: Gene
SIO_000068: ncbigene

position:47695:1
position: 47695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48183:1
position: 48183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47695-48183:1:exon

F0316_RS14130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
gene: radC
locus tag: F0316_RS14130
old locus tag: F0316_14135
inference: COORDINATES: protein motif:HMM:TIGR00608.1
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MSVKQTLENIDVSLCSIEECEAIYSLANRLAKYQMSNLTALSKPNDARIYLQNAYMGFEYEIFGVIFLDNQHRIIATKELFRGTIDSASVYPREVAKLALKHNSAACLFFHNHPSGAVEPSNADRKITERLKDALELLDIKVLDHFVVGREGAVSFVERGFL
SIO_010081: F0316_RS14130
subclass of: SO_0000673
so part of: F0316_RS14130
location: 47695..48183
location: region:47695-48183:1
so has part: feature:47695-48183:1:exon

WP_149560617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47695-48183:1:exon

F0316_RS14135
type: Gene
subclass of: SO_0000704
RO_0002162: 666
locus tag: F0316_RS14135
old locus tag: F0316_14140
so part of: sequence
location: 48268..48624
location: region:48268-48624:1
so has part: feature:48268-48624:1:exon
subclass of: SO_0000010

69721272
type: Gene
SIO_000068: ncbigene

position:48268:1
position: 48268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48624:1
position: 48624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48268-48624:1:exon

F0316_RS14135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 666
locus tag: F0316_RS14135
old locus tag: F0316_14140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHKEILMDGSPTYPNAKKAPFRVFDLGNLSHWLYLLSGETLWFESVHDMHNFIRGLLDRCFVAFPEMDGIDVFRVCTRFSCTRAMIRYNGLWHVIDVRSCTVVLIKSLDKRADAEELV
SIO_010081: F0316_RS14135
subclass of: SO_0000673
so part of: F0316_RS14135
location: 48268..48624
location: region:48268-48624:1
so has part: feature:48268-48624:1:exon

WP_149560618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48268-48624:1:exon