Erwinia amylovora CFBP1430 plasmid pEA29, complete sequence.
type: Entry
definition: Erwinia amylovora CFBP1430 plasmid pEA29, complete sequence.
sequence version: NC_013957.1
sequence date: 2022-12-30
sequence: sequence
division: CON
label: NC_013957.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA3138297
keyword: RefSeq
keyword: complete genome
source: Erwinia amylovora CFBP1430
organism: Erwinia amylovora CFBP1430
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Erwinia.
reference: 1
references: 20192826
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFN434114.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 00:58:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,488\nCDSs (total) :: 3,367\nGenes (coding) :: 3,284\nCDSs (with protein) :: 3,284\nGenes (RNA) :: 121\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 77\nncRNAs :: 22\nPseudo Genes (total) :: 83\nCDSs (without protein) :: 83\nPseudo Genes (ambiguous residues) :: 0 of 83\nPseudo Genes (frameshifted) :: 48 of 83\nPseudo Genes (incomplete) :: 43 of 83\nPseudo Genes (internal stop) :: 31 of 83\nPseudo Genes (multiple problems) :: 30 of 83\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28259
topology: circular
so has quality: SO_0000988
location: 1..28259
location: region:1-28259:1
RO_0002162: 665029

NC_013957
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA3138297
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp
author: Smits, T.H.
author: Rezzonico, F.
author: Kamber, T.
author: Blom, J.
author: Goesmann, A.
author: Frey, J.E.
author: Duffy, B.
journal: Mol Plant Microbe Interact
volume: 23
issue: 4
pages: 384-393
year: 2010
pubmed: 20192826

20192826
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Blom, J.
journal: Submitted (24-JUL-2009) Blom J., Cebitec, Bielefeld University, Universitaetsstr. 25, 33615, GERMANY

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28259:1
position: 28259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28259:1:source
so part of: sequence
organism: Erwinia amylovora CFBP1430
mol type: genomic DNA
strain: CFPB1430
plasmid: pEA29

665029
type: Taxonomy
SIO_000068: taxonomy

EAMY_RS34425
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34425
old locus tag: EAMY_3712
so part of: sequence
location: 13..990
location: region:13-990:1
so has part: feature:13-990:1:exon
subclass of: SO_0000010

8893809
type: Gene
SIO_000068: ncbigene

position:13:1
position: 13
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990:1
position: 990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13-990:1:exon

EAMY_RS34425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34425
old locus tag: EAMY_3712
function: Protein involved in initiation of plasmid replication
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MELNKLTVVQGNDLLEGAYSVTLDEMRLLNLALAQIDSRKPQPDALYRLFPHDYQRIYGLNPTSCHRQLREAAESLMKKPVTIYQPDRKSGKTRTVQLSWFSRLEYVSSDEQSAVILRFGQDVAPYLYELKESFTKLNFTNIAKLDTPFSVRLYGWLIKAKNLYGRKGSKAIEVTLALDWMREKAGLQGKYEDYRDFRQKLLEPTLARINANTDISVIWHPVKKGRTVVSIRFSYVDESTPEASKPLRPKFPRRPRAAAGSELEGAWARRCIAIMEQYRDCLITYDRTEKVPLTDVRKLAGWYKIIGDKIACKRVMSEVNARAKK
SIO_010081: EAMY_RS34425
subclass of: SO_0000673
so part of: EAMY_RS34425
location: 13..990
location: region:13-990:1
so has part: feature:13-990:1:exon

WP_009351627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13-990:1:exon

EAMY_RS36805
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS36805
old locus tag: EAMY_3714
so part of: sequence
location: complement(1691..1825)
location: region:1691-1825:-1
so has part: feature:1691-1825:-1:exon
subclass of: SO_0000010

77383451
type: Gene
SIO_000068: ncbigene

position:1691:-1
position: 1691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825:-1
position: 1825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691-1825:-1:exon

EAMY_RS36805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS36805
old locus tag: EAMY_3714
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPASGLNPNNADTGDVKLTLRPGVAEKVFHITAEMNAGSTLR
SIO_010081: EAMY_RS36805
subclass of: SO_0000673
so part of: EAMY_RS36805
location: complement(1691..1825)
location: region:1691-1825:-1
so has part: feature:1691-1825:-1:exon

WP_009351630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1691-1825:-1:exon

EAMY_RS34430
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34430
old locus tag: EAMY_3715
so part of: sequence
location: complement(2725..3129)
location: region:2725-3129:-1
so has part: feature:2725-3129:-1:exon
subclass of: SO_0000010

8893782
type: Gene
SIO_000068: ncbigene

position:2725:-1
position: 2725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3129:-1
position: 3129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2725-3129:-1:exon

EAMY_RS34430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34430
old locus tag: EAMY_3715
function: DNA-binding protein H-NS
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011113994.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MSETLKVLNNIRTLRAQAREVSLSELEEMLEKLEAVVNERRDAEAAIASEIKEKEEKLAKYRQMLLEDGIDLSELTSAENTSGKPRAKRAPRPAKYEYTDENGEHKSWTGQGRTPAVIKQALDAGKKLEDFLIK
SIO_010081: EAMY_RS34430
subclass of: SO_0000673
so part of: EAMY_RS34430
location: complement(2725..3129)
location: region:2725-3129:-1
so has part: feature:2725-3129:-1:exon

WP_009351632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2725-3129:-1:exon

EAMY_RS35580
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS35580
pseudo: true
so part of: sequence
location: complement(3890..>4431)
location: region:3890-4431:-1
so has part: feature:3890-4431:-1:exon
subclass of: SO_0000010

30317031
type: Gene
SIO_000068: ncbigene

position:3890:-1
position: 3890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4431:-1
position: 4431
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3890-4431:-1:exon

EAMY_RS35580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS35580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002231174.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0004175 - endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: omptin family outer membrane protease
SIO_010081: EAMY_RS35580
subclass of: SO_0000673
so part of: EAMY_RS35580
location: complement(3890..>4431)
location: region:3890-4431:-1
so has part: feature:3890-4431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3890-4431:-1:exon

EAMY_RS34440
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34440
old locus tag: EAMY_3718
so part of: sequence
location: complement(4770..5627)
location: region:4770-5627:-1
so has part: feature:4770-5627:-1:exon
subclass of: SO_0000010

8893783
type: Gene
SIO_000068: ncbigene

position:4770:-1
position: 4770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5627:-1
position: 5627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4770-5627:-1:exon

EAMY_RS34440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34440
old locus tag: EAMY_3718
function: Transcriptional regulator
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MELAQLEIFRAIAEEGSVTAAAEKLHRVPSNISTRLKQLEKELGCELFRREKLRLYITDNGRTFLAYSQRILALSEEAKQSVSGQRPDGIFTLGAIESTAAVRLPPLIARYHQSWPQVGLDLSTGPSGDMVDGVLAGRYSAAFVDGPPKHPRLEGIPVFAEELVLITALNHPPVSAASAVSGSTIYTFRENCSYRRLFENWFARTHAVPGKIFEMESYHGILACVSAGAGLALIPASMLESMPGRDSVKAWPLSEAMGQIAIWLVWHKGTRSANLQAMKTLLTED
SIO_010081: EAMY_RS34440
subclass of: SO_0000673
so part of: EAMY_RS34440
location: complement(4770..5627)
location: region:4770-5627:-1
so has part: feature:4770-5627:-1:exon

WP_009351639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4770-5627:-1:exon

EAMY_RS34445
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34445
old locus tag: EAMY_3719
so part of: sequence
location: 5770..7158
location: region:5770-7158:1
so has part: feature:5770-7158:1:exon
subclass of: SO_0000010

8893807
type: Gene
SIO_000068: ncbigene

position:5770:1
position: 5770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7158:1
position: 7158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5770-7158:1:exon

EAMY_RS34445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34445
old locus tag: EAMY_3719
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012440525.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MMKNVSSAVAVSRNPATGEVFARYPFATIDEVDRALALTHGAFQDWRHSVMSDRVRLLRNVAGALRQQARELAEMMTSEMGKPVDQGLAEVEKSARLCEWYAEHGPAFLQREPTLVEGNKAFVDYLPLGPVLSVMPWNFPVWQVLRGAVPILLAGNSYLLKPAPNVMGCALLLQQILSRAGVPQGLFAVVNADNDGVAQAINDRRIAAVTVTGSVRAGAAIAALSGAAIKKCVLELGGSDAFIVLAEADIDAAVKGAIAGRFMNNGQLCISAKRIIVEAAVFETFRDKFVCAVREMKIGDPRESGTWIGPMARYDLRDELDAQVQATLKEGATLLLGGHVLPGEGNYYAPTVLSDVKPGMTSFVQELFGPVASLIMADDAGHAVAMANDSEFGLGGSLWSRDLAVAQKLASRIETGSVFINSPSFSDPRVPIGGVKKSGFGRELSHFGLREFTNAQTVWMEG
SIO_010081: EAMY_RS34445
subclass of: SO_0000673
so part of: EAMY_RS34445
location: 5770..7158
location: region:5770-7158:1
so has part: feature:5770-7158:1:exon

WP_013036331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5770-7158:1:exon

EAMY_RS34450
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34450
old locus tag: EAMY_3721
so part of: sequence
location: complement(7441..8997)
location: region:7441-8997:-1
so has part: feature:7441-8997:-1:exon
subclass of: SO_0000010

8893784
type: Gene
SIO_000068: ncbigene

position:7441:-1
position: 7441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8997:-1
position: 8997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7441-8997:-1:exon

EAMY_RS34450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34450
old locus tag: EAMY_3721
function: Methyl-accepting chemotaxis protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351645.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNRWTVKVKLSMSIAMIIISFLILTSFLLSRLTATTSELQNLYERDYQSASIIGQVDGLLTRVDINILRMIAIGDPASIAGWKKQNTENFDEVNALLNKLKPTIDTTMTSSFNGLISSYELMRKGMEHQVQAVESGDIKKASEINRNEVKAYADKTFGALSTLKKHQDAVAENKVVAQKRKDFRTLIISLLAAGAVTLISVALGTLILRSLLRQLGGEPLAAAQEVRLMAGGDLSHPILVEQHDRVSLLAQLKDMQSSLSALVTNVRSNAESLATASTQISQGNQDLSQRTEEQASSLQQTSATMEQLGSTVSNNAENAHQASQLASGASTLAAEGELMVGRVISTMRVINDSSKKISEIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSANAAKEISTLITNSVGQVEQGCLLVDETGVTMTRIMEAIKQVKYIVSEISAASLEQSSGVKQVGQAITQIDMVTQQNAALVEESAAATENLKEQAEQLVQAVAVFQVTATAV
SIO_010081: EAMY_RS34450
subclass of: SO_0000673
so part of: EAMY_RS34450
location: complement(7441..8997)
location: region:7441-8997:-1
so has part: feature:7441-8997:-1:exon

WP_009351645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7441-8997:-1:exon

EAMY_RS34455
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34455
old locus tag: EAMY_3722
so part of: sequence
location: complement(9346..9630)
location: region:9346-9630:-1
so has part: feature:9346-9630:-1:exon
subclass of: SO_0000010

8893785
type: Gene
SIO_000068: ncbigene

position:9346:-1
position: 9346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9630:-1
position: 9630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9346-9630:-1:exon

EAMY_RS34455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34455
old locus tag: EAMY_3722
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013202123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VF530 family DNA-binding protein
translation: MTTHSSKDPLHGVTLEALLTMLVARFGWQQLAERININCFKSDPSIKSSLKFLRRTPWARKEVEDLYIASLKDNHSAKPEMPTDNPWNSRQRKD
SIO_010081: EAMY_RS34455
subclass of: SO_0000673
so part of: EAMY_RS34455
location: complement(9346..9630)
location: region:9346-9630:-1
so has part: feature:9346-9630:-1:exon

WP_013036332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9346-9630:-1:exon

EAMY_RS34460
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34460
so part of: sequence
location: 9843..10139
location: region:9843-10139:1
so has part: feature:9843-10139:1:exon
subclass of: SO_0000010

23673455
type: Gene
SIO_000068: ncbigene

position:9843:1
position: 9843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10139:1
position: 10139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9843-10139:1:exon

EAMY_RS34460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007899852.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSFIHLLYSPAELAREVGENAKTLRLSRNLSRKTLAIKSGVSESTIKRFEMTGVVTLEALILMATALDELSSVAKLFKPEHPNNYEELKNTKRKRGMQ
SIO_010081: EAMY_RS34460
subclass of: SO_0000673
so part of: EAMY_RS34460
location: 9843..10139
location: region:9843-10139:1
so has part: feature:9843-10139:1:exon

WP_013036333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9843-10139:1:exon

EAMY_RS34465
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34465
old locus tag: EAMY_3723
so part of: sequence
location: 10136..11419
location: region:10136-11419:1
so has part: feature:10136-11419:1:exon
subclass of: SO_0000010

8893786
type: Gene
SIO_000068: ncbigene

position:10136:1
position: 10136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11419:1
position: 11419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10136-11419:1:exon

EAMY_RS34465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34465
old locus tag: EAMY_3723
function: Uncharacterized protein related to capsule biosynthesis enzymes
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MKMRGLKHTESLVVLKSGVKVGELFKPEGKGIYFVYDQHWIATGFNLSPLTMKFDNKPQLAQDAKLFEGLHGPFADSLPDGWGMLLMDRFFNSTFGDGTAYTVTALDRLAYMGDRCMGAFEYQPKADKSALTGTVSLAELFEQSVGVQEGETSTVLSKLRLAGGSPGGARPKAIVALSPDGKHATSAFDKIPEGYSHWIVKFRDLNEPVETGGIEFAYAEMARDAGIDMAESSILNITLPTGRVENFFATRRFDRCGDKKIHMITVAALMYASFREPSMDYASLLKLTQHLTRNSREVEKMARLMIFNALSHNHDDHTKNFAFLCHDPEHTGGESIWTLAPAYDLTFSRAMGEHTTGFGGKNPGKPTRKRINEICQDYKYLKADEYIEQTLDALSRWKDVFERLKIPQKSGTGIFNILNKLHRDFES
SIO_010081: EAMY_RS34465
subclass of: SO_0000673
so part of: EAMY_RS34465
location: 10136..11419
location: region:10136-11419:1
so has part: feature:10136-11419:1:exon

WP_009351649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10136-11419:1:exon

EAMY_RS34470
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34470
old locus tag: EAMY_3724
so part of: sequence
location: complement(11613..12578)
location: region:11613-12578:-1
so has part: feature:11613-12578:-1:exon
subclass of: SO_0000010

8893787
type: Gene
SIO_000068: ncbigene

position:11613:-1
position: 11613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12578:-1
position: 12578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11613-12578:-1:exon

EAMY_RS34470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34470
old locus tag: EAMY_3724
function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HesA/MoeB/ThiF family protein
translation: MSRYQRQSMLPEIGESGQQRLAQARVLVIGAGGLGSALLPLLAAAGAGYLRLYDGDRVEEHNLHRQTLYGMQDIGEEKVFCARRALATRNPACVVDARPHALTASATAAALDGIDLAIDAADNFALTYQLSDACLAHRIPLVSASVLGRRGYVGGFCGGAPSYRALFPQLPGSAANCNTAGVMGPAVATLGAMQAQMALSILLNFSPSPLGCLVNCDFVQWHFRPFRFDSAAEPDRPPVPFIDRHLLTAEDCIVELRSVDEAPESIADAVQRVLPQQLSDWQPPADRRIVLVCASGIRAAKAAMALELRGFSHLAMIAAGR
SIO_010081: EAMY_RS34470
subclass of: SO_0000673
so part of: EAMY_RS34470
location: complement(11613..12578)
location: region:11613-12578:-1
so has part: feature:11613-12578:-1:exon

WP_009351651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11613-12578:-1:exon

EAMY_RS34475
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34475
old locus tag: EAMY_3725
so part of: sequence
location: complement(12594..13352)
location: region:12594-13352:-1
so has part: feature:12594-13352:-1:exon
subclass of: SO_0000010

8893800
type: Gene
SIO_000068: ncbigene

position:12594:-1
position: 12594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13352:-1
position: 13352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12594-13352:-1:exon

EAMY_RS34475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34475
old locus tag: EAMY_3725
EC number: 2.8.1.10
function: Uncharacterized enzyme of thiazole biosynthesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009093096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiazole synthase
translation: MFYDFVPQSRFLLGTAGYPSPQILQQAIEASGSEIITVSLRREGSQGGAFRALLTQLNKRVLPNTAGCHTVKEAVTTAYMARELFNTRWIKLEVIGHADTLQPDPFALVEAARILCADGFQVFPYTTEDLILGEKLLEAGCKLLMPWGAPIGSGQGLRNIEGLRSMRSWFKDIPLIIDAGIGAPSQAAQAMEMGFDGILLNTAVARAQDPLGMAQAFASAIRAGYDARSAGLIERRDMATASTPIFGMAQFS
SIO_010081: EAMY_RS34475
subclass of: SO_0000673
so part of: EAMY_RS34475
location: complement(12594..13352)
location: region:12594-13352:-1
so has part: feature:12594-13352:-1:exon

WP_009351653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12594-13352:-1:exon

EAMY_RS34480
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
gene: thiS
locus tag: EAMY_RS34480
old locus tag: EAMY_3726
so part of: sequence
location: complement(13356..13553)
location: region:13356-13553:-1
so has part: feature:13356-13553:-1:exon
subclass of: SO_0000010

8893801
type: Gene
SIO_000068: ncbigene

position:13356:-1
position: 13356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13553:-1
position: 13553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13356-13553:-1:exon

EAMY_RS34480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
gene: thiS
locus tag: EAMY_RS34480
old locus tag: EAMY_3726
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014598218.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
translation: MKIQLNGSSIDTHARTLAELLHERQIDAGCIASAVNGQFVPRSQYDSQPLTEGCALEVLAPMQGG
SIO_010081: EAMY_RS34480
subclass of: SO_0000673
so part of: EAMY_RS34480
location: complement(13356..13553)
location: region:13356-13553:-1
so has part: feature:13356-13553:-1:exon

WP_009351654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13356-13553:-1:exon

EAMY_RS34485
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34485
old locus tag: EAMY_3727
so part of: sequence
location: complement(13550..14482)
location: region:13550-14482:-1
so has part: feature:13550-14482:-1:exon
subclass of: SO_0000010

8893803
type: Gene
SIO_000068: ncbigene

position:13550:-1
position: 13550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14482:-1
position: 14482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14482:-1:exon

EAMY_RS34485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34485
old locus tag: EAMY_3727
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122035.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSRWSVIGDGVTGLCVATLLAERGESLEVITDEHRQPASHWAGGMLAPWCEGESAPPEVVELGQRSAPWWCAHVDGVEHRGTLVVAPPRDAPELTRFARMTHAHQWVEPGTLEPDLAGRFARGLFFAGEAHLDPRSAMQQLRKKLRRAGVNFHGGQPAGRAIDCRGIHAAAQMPGLRAVRGEMLILHSDDLRFSRPVRLLHPRFPCYLVPRAEGHFMLGATMVESHDSSPISARAMMELLSAAYGIHPALAEARIVESGTGLRPALPDNIPDIRHRNGTWYLNGMYRHGFLLAPVMAEKLMQQLTQENLI
SIO_010081: EAMY_RS34485
subclass of: SO_0000673
so part of: EAMY_RS34485
location: complement(13550..14482)
location: region:13550-14482:-1
so has part: feature:13550-14482:-1:exon

WP_033477759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14482:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 665029
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: complement(14626..14753)
location: region:14626-14753:-1
so has part: feature:14626-14753:-1:region

position:14626:-1
position: 14626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14753:-1
position: 14753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14626-14753:-1:region

EAMY_RS34490
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34490
old locus tag: EAMY_3728
so part of: sequence
location: 14982..15227
location: region:14982-15227:1
so has part: feature:14982-15227:1:exon
subclass of: SO_0000010

8893802
type: Gene
SIO_000068: ncbigene

position:14982:1
position: 14982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15227:1
position: 15227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14982-15227:1:exon

EAMY_RS34490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34490
old locus tag: EAMY_3728
function: Antitoxin of toxin-antitoxin stability system
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MEKVNIYDAKTNLSRIVQEVARTGETVLIARNGHALVKVIAYKEEKPKRKLGFLKGKGSVPADFDNLNSNEIQDMFEGKYS
SIO_010081: EAMY_RS34490
subclass of: SO_0000673
so part of: EAMY_RS34490
location: 14982..15227
location: region:14982-15227:1
so has part: feature:14982-15227:1:exon

WP_009351656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14982-15227:1:exon

EAMY_RS34495
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34495
old locus tag: EAMY_3729
so part of: sequence
location: 15249..15647
location: region:15249-15647:1
so has part: feature:15249-15647:1:exon
subclass of: SO_0000010

8893788
type: Gene
SIO_000068: ncbigene

position:15249:1
position: 15249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15647:1
position: 15647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15249-15647:1:exon

EAMY_RS34495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34495
old locus tag: EAMY_3729
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008958605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MLLFMAYEPERLAENVVALLEDADLTLCFSAASIWEVVIKSGLNKPDFDVGPEEFRNGLFNAGLLEIPVKSEHTLIVADLPEKRHKDPFDRLIVAQAKHNKVPLITSDSKLIEFVSDYITIIPNKYGLPPPR
SIO_010081: EAMY_RS34495
subclass of: SO_0000673
so part of: EAMY_RS34495
location: 15249..15647
location: region:15249-15647:1
so has part: feature:15249-15647:1:exon

WP_223386258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15249-15647:1:exon

EAMY_RS36270
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS36270
pseudo: true
so part of: sequence
location: 15685..>15762
location: region:15685-15762:1
so has part: feature:15685-15762:1:exon
subclass of: SO_0000010

43837323
type: Gene
SIO_000068: ncbigene

position:15685:1
position: 15685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15762:1
position: 15762
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15685-15762:1:exon

EAMY_RS36270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS36270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: EAMY_RS36270
subclass of: SO_0000673
so part of: EAMY_RS36270
location: 15685..>15762
location: region:15685-15762:1
so has part: feature:15685-15762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15685-15762:1:exon

EAMY_RS36110
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS36110
old locus tag: EAMY_3730
pseudo: true
so part of: sequence
location: 15835..>15951
location: region:15835-15951:1
so has part: feature:15835-15951:1:exon
subclass of: SO_0000010

41697650
type: Gene
SIO_000068: ncbigene

position:15835:1
position: 15835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15951:1
position: 15951
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15835-15951:1:exon

EAMY_RS36110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS36110
old locus tag: EAMY_3730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: EAMY_RS36110
subclass of: SO_0000673
so part of: EAMY_RS36110
location: 15835..>15951
location: region:15835-15951:1
so has part: feature:15835-15951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15835-15951:1:exon

EAMY_RS36115
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS36115
pseudo: true
so part of: sequence
location: complement(<16080..16151)
location: region:16080-16151:-1
so has part: feature:16080-16151:-1:exon
subclass of: SO_0000010

41697651
type: Gene
SIO_000068: ncbigene

position:16080:-1
position: 16080
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16151:-1
position: 16151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16080-16151:-1:exon

EAMY_RS36115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS36115
inference: COORDINATES: protein motif:HMM:NF013677.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: EAMY_RS36115
subclass of: SO_0000673
so part of: EAMY_RS36115
location: complement(<16080..16151)
location: region:16080-16151:-1
so has part: feature:16080-16151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16080-16151:-1:exon

EAMY_RS34505
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34505
old locus tag: EAMY_3731
so part of: sequence
location: complement(16311..16541)
location: region:16311-16541:-1
so has part: feature:16311-16541:-1:exon
subclass of: SO_0000010

8893806
type: Gene
SIO_000068: ncbigene

position:16311:-1
position: 16311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16541:-1
position: 16541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16311-16541:-1:exon

EAMY_RS34505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34505
old locus tag: EAMY_3731
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000051067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MALEKNHTSSKKMTFGEHRDLDKVVDSPLPSGKSKRVNVNFNEEKHTRFKAACVKNGTSITDVINQLVDNWLTEHE
SIO_010081: EAMY_RS34505
subclass of: SO_0000673
so part of: EAMY_RS34505
location: complement(16311..16541)
location: region:16311-16541:-1
so has part: feature:16311-16541:-1:exon

WP_009351660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16311-16541:-1:exon

EAMY_RS34510
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34510
old locus tag: EAMY_3732
so part of: sequence
location: complement(16649..17269)
location: region:16649-17269:-1
so has part: feature:16649-17269:-1:exon
subclass of: SO_0000010

8893797
type: Gene
SIO_000068: ncbigene

position:16649:-1
position: 16649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17269:-1
position: 17269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16649-17269:-1:exon

EAMY_RS34510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34510
old locus tag: EAMY_3732
function: ATPases involved in chromosome partitioning
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000864791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKVISFLNPKGGSGKTTAVINVSAAMARAGYNIAVVDTDPQMSLTNWSKTGNAAFDVFTAASEKDVYGIRKDLAEYDFTIVDGAGSLSVITSAAVMVSDLVIIPVTPSPLDFSAAGSVVTVLEAQAYSRKVEARFLITRKIEQATMLKVLKESIKDTGVNPFRTAITQRQIYVKSILDGESVFESNDGAAKGEIEMLTKEIVSHIE
SIO_010081: EAMY_RS34510
subclass of: SO_0000673
so part of: EAMY_RS34510
location: complement(16649..17269)
location: region:16649-17269:-1
so has part: feature:16649-17269:-1:exon

WP_009351662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16649-17269:-1:exon

EAMY_RS34520
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34520
old locus tag: EAMY_3735
so part of: sequence
location: 18266..18850
location: region:18266-18850:1
so has part: feature:18266-18850:1:exon
subclass of: SO_0000010

8893791
type: Gene
SIO_000068: ncbigene

position:18266:1
position: 18266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18850:1
position: 18850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18266-18850:1:exon

EAMY_RS34520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34520
old locus tag: EAMY_3735
function: Site-specific recombinases, DNA invertase Pin homologs
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSRVFAYCRVSTLEQNTDNQRREIEAAGFSVKAQRLIEEHISGSVAASERPGFIKLLDRMEEGDVLIVTKLDRLGRNAIDIRKTVELLADSDIRVHCLALGGVDLTSPAGKMTMQVISAVAEFERDLLLERTHSGIARAKASGKRFGRPPTLNDDQKQSVLARLSTGMSVSAVAREFKTTRQTILRVRAASLMS
SIO_010081: EAMY_RS34520
subclass of: SO_0000673
so part of: EAMY_RS34520
location: 18266..18850
location: region:18266-18850:1
so has part: feature:18266-18850:1:exon

WP_009351668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18266-18850:1:exon

EAMY_RS34525
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34525
old locus tag: EAMY_3736
so part of: sequence
location: 19180..19839
location: region:19180-19839:1
so has part: feature:19180-19839:1:exon
subclass of: SO_0000010

8893804
type: Gene
SIO_000068: ncbigene

position:19180:1
position: 19180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19839:1
position: 19839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19180-19839:1:exon

EAMY_RS34525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34525
old locus tag: EAMY_3736
EC number: 2.1.-.-
function: SAM-dependent methyltransferases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MDIKSEKGASIYSPLVLKLYDTWVLNISNNYAWRCNTDNILLPHFKQNMAKRHLDIGVGTGYYLAKAKQSSDAITLLDLNPNSLAAAKKRIGAHRIKHVLQHNIFTPLPESEKNKYDSVSMYYLLHCLQGNIKEKASAIENASQALTEEGTLHGATILGSGVEHNAFGRYLMNVYNKKGIFSNKFDSLDDLKSVLEHYFDQVKIQQHGVVAVFTATGKK
SIO_010081: EAMY_RS34525
subclass of: SO_0000673
so part of: EAMY_RS34525
location: 19180..19839
location: region:19180-19839:1
so has part: feature:19180-19839:1:exon

WP_009351670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19180-19839:1:exon

EAMY_RS34530
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34530
old locus tag: EAMY_3737
so part of: sequence
location: complement(20129..22159)
location: region:20129-22159:-1
so has part: feature:20129-22159:-1:exon
subclass of: SO_0000010

8893805
type: Gene
SIO_000068: ncbigene

position:20129:-1
position: 20129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22159:-1
position: 22159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20129-22159:-1:exon

EAMY_RS34530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34530
old locus tag: EAMY_3737
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: choline transporter
translation: MPATEIPEKPQKDRINPVVFYTSAVLILLFSLTTILFTEFSDRWINRTLNWVSNTFGWYYLLAATLYIVFVIFMACSRFGSIKLGPEQSKPEFSLMSWAAMLFAAGIGIDLMFFSVAEPVTQYMMPPEGQGQTLEAARQAMVWTLFHYGLTGWSMYALMGIALGYFSYRYGLPLTIRSALYPIFGKRVNGPIGHTVDIAAVLGTIFGIATTLGIGVVQLNYGLKVLFDVPEGLTAQAGLIVLSVIMATISVTSGVNKGIRLLSELNVLLAFGLILFVLFVGDTSFLLNALVLNVGDYINRFMGMTLDSFAFDRPAEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLTIPFIFTLLWLSIFGNSALNEIIHGNLALAQETLAHPERGFYSLLAQYPGFTFSASVATITGLLFYVTSADSGSLVLGNFTSRLADINNDAPNWLRIFWSVTIGVLTMGMLMVNGVTALQKTTVIMGLPFSFVIFFVMAGLYKSLRVEDHRRASATVNTPPVTVDRLNWKQRISRVMNYPGTTHTRKMLDNVCRPAMEEVGRELEHRGAKVQVNELPAVDDERLNHLELLVDLADEQSFLYQIWPQRYSVPAFTYRARSGKSDYFRLETFLLEGTQGNDLMDYTKEQIINDILDQYERHLTFLHIHREAPGNSMPFPEV
SIO_010081: EAMY_RS34530
subclass of: SO_0000673
so part of: EAMY_RS34530
location: complement(20129..22159)
location: region:20129-22159:-1
so has part: feature:20129-22159:-1:exon

WP_011167225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20129-22159:-1:exon

EAMY_RS34535
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34535
old locus tag: EAMY_3738
so part of: sequence
location: 22571..23569
location: region:22571-23569:1
so has part: feature:22571-23569:1:exon
subclass of: SO_0000010

8893794
type: Gene
SIO_000068: ncbigene

position:22571:1
position: 22571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23569:1
position: 23569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22571-23569:1:exon

EAMY_RS34535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34535
old locus tag: EAMY_3738
function: Uncharacterized conserved protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPERKSKGGKNATSTPHDLAFKQFLTHPDTARDFMRLHLPPHLQTVCDLNTLKLESGSFVEESLRPYFSDVLYSLQSTTGDAYIHVLIEHQSTPDKHMAFRLIRYAVAAMQRHLDAGHQKLPLVIPVLFYTGRRSPYPYSTCWLDEFDDPALAEKLYGGDFPLVDVTIIPDDEIMGHRSMAALTLLQKHIHRRDLADMLDNLTTLLVTEHITGQQLVSLINYLLQAGETSDAETFVRKLAQKVPQYEDKLMTIAQQLEQKGIEKGRAEARAEALTEGEHNGEHKAALRIAQTMLQQGFDRNIVMELTGLSEDDMAQIEKDRVARAGRALSRR
SIO_010081: EAMY_RS34535
subclass of: SO_0000673
so part of: EAMY_RS34535
location: 22571..23569
location: region:22571-23569:1
so has part: feature:22571-23569:1:exon

WP_009351674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22571-23569:1:exon

EAMY_RS35830
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS35830
so part of: sequence
location: complement(23555..24019)
location: region:23555-24019:-1
so has part: feature:23555-24019:-1:exon
subclass of: SO_0000010

31493075
type: Gene
SIO_000068: ncbigene

position:23555:-1
position: 23555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24019:-1
position: 24019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23555-24019:-1:exon

EAMY_RS35830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS35830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIRHQKCIRGGVAKVRTLQVQMNTRFTPSALFRPGVREAAIWRYLAALSKENTFNKFKTGDIFKIGMTRHGVHASQPCTGVGQEEDSMQIVTERRPASRTSNFEAKKLTRHGLHIVNVATVRAYCRVRFVNHRFESNPNGASKVTEKSHSPPR
SIO_010081: EAMY_RS35830
subclass of: SO_0000673
so part of: EAMY_RS35830
location: complement(23555..24019)
location: region:23555-24019:-1
so has part: feature:23555-24019:-1:exon

WP_080515496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23555-24019:-1:exon

EAMY_RS35600
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS35600
pseudo: true
so part of: sequence
location: 23998..24291
location: region:23998-24291:1
so has part: feature:23998-24291:1:exon
subclass of: SO_0000010

30317035
type: Gene
SIO_000068: ncbigene

position:23998:1
position: 23998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24291:1
position: 24291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23998-24291:1:exon

EAMY_RS35600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS35600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018412614.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
SIO_010081: EAMY_RS35600
subclass of: SO_0000673
so part of: EAMY_RS35600
location: 23998..24291
location: region:23998-24291:1
so has part: feature:23998-24291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23998-24291:1:exon

EAMY_RS34545
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
gene: msrA
locus tag: EAMY_RS34545
old locus tag: EAMY_3740
so part of: sequence
location: 25131..25667
location: region:25131-25667:1
so has part: feature:25131-25667:1:exon
subclass of: SO_0000010

8893792
type: Gene
SIO_000068: ncbigene

position:25131:1
position: 25131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25667:1
position: 25667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25131-25667:1:exon

EAMY_RS34545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
gene: msrA
locus tag: EAMY_RS34545
old locus tag: EAMY_3740
EC number: 1.8.4.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114009.1
GO function: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase MsrA
translation: MATEYAMIAGGCFWCTEAVFKQINGVESVESGYIGGHTENPTYKQVCNGDTGHAEAIRIGFDPEKVSFGDLLDISFATHDPTQLNRQGNDIGTQYRSAIFPTSAQQAEEAIAAIARARSEYSDPIVTSIEAGAAWYPAEDCHQDYWAGEGQENRYCLAVIPPKLQKLRKRFAAYAVSE
SIO_010081: EAMY_RS34545
subclass of: SO_0000673
so part of: EAMY_RS34545
location: 25131..25667
location: region:25131-25667:1
so has part: feature:25131-25667:1:exon

WP_009351678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25131-25667:1:exon

EAMY_RS34550
type: Gene
subclass of: SO_0000704
RO_0002162: 665029
locus tag: EAMY_RS34550
pseudo: true
so part of: sequence
location: 26315..26918
location: region:26315-26918:1
so has part: feature:26315-26918:1:exon
subclass of: SO_0000010

23673457
type: Gene
SIO_000068: ncbigene

position:26315:1
position: 26315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26918:1
position: 26918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26315-26918:1:exon

EAMY_RS34550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 665029
locus tag: EAMY_RS34550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001722375.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ParA family protein
SIO_010081: EAMY_RS34550
subclass of: SO_0000673
so part of: EAMY_RS34550
location: 26315..26918
location: region:26315-26918:1
so has part: feature:26315-26918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26315-26918:1:exon