Haloarcula sinaiiensis ATCC 33800 plasmid pHsi540, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Haloarcula.
Complete Genome and Methylome Analysis of the Box-Shaped Halophilic Archaeon Haloarcula sinaiiensis ATCC 33800
Microbiol Resour Announc 10 (34), e0061921 (2021)
Submitted (20-APR-2021) Microbiology and Immunology, University of Maryland, 701 East Pratt Street, Baltimore, MD 21202, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP073368.1.\nBacteria and source DNA available from ATCC 33800.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 13-MAR-2019\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: Hsi_HGAP3_2_jobs_028_028947_data_polished\n _assembly\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 167.79x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 04:44:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,624\nCDSs (total) :: 4,560\nGenes (coding) :: 4,447\nCDSs (with protein) :: 4,447\nGenes (RNA) :: 64\nrRNAs :: 5, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 4, 4 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 2\nPseudo Genes (total) :: 113\nCDSs (without protein) :: 113\nPseudo Genes (ambiguous residues) :: 0 of 113\nPseudo Genes (frameshifted) :: 39 of 113\nPseudo Genes (incomplete) :: 82 of 113\nPseudo Genes (internal stop) :: 28 of 113\nPseudo Genes (multiple problems) :: 30 of 113\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011224878.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional metallophosphatase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_007187980.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966653.1
COORDINATES: similar to AA sequence:RefSeq:WP_004514859.1
COORDINATES: similar to AA sequence:RefSeq:WP_004514860.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_004966650.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308314.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004966648.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008308317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007187973.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030927.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308320.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308323.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308325.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594272.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188612.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594274.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_015300881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004515216.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011224892.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966633.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966632.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011224895.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966630.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224896.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011224897.1
COORDINATES: similar to AA sequence:RefSeq:WP_004515217.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004515218.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188606.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966623.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890417.1
COORDINATES: similar to AA sequence:RefSeq:WP_004598683.1
COORDINATES: similar to AA sequence:RefSeq:WP_006628335.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945379.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188604.1
COORDINATES: similar to AA sequence:RefSeq:WP_006628337.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004966617.1
COORDINATES: similar to AA sequence:RefSeq:WP_014031059.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966615.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966613.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011224905.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224906.1
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: similar to AA sequence:RefSeq:WP_012996429.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004966609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966607.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188593.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014030911.1
COORDINATES: similar to AA sequence:RefSeq:WP_008454081.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538774.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004594282.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538772.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188588.1
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014030905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517465.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030903.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004966595.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005538763.1
GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity [Evidence IEA]
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
1,2-phenylacetyl-CoA epoxidase subunit PaaA
COORDINATES: similar to AA sequence:RefSeq:WP_004517461.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538759.1
1,2-phenylacetyl-CoA epoxidase subunit PaaC
COORDINATES: similar to AA sequence:RefSeq:WP_005538757.1
1,2-phenylacetyl-CoA epoxidase subunit PaaD
COORDINATES: similar to AA sequence:RefSeq:WP_004517458.1
1,2-phenylacetyl-CoA epoxidase subunit PaaE
COORDINATES: similar to AA sequence:RefSeq:WP_014030897.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944034.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007188581.1
hydroxyphenylacetyl-CoA thioesterase PaaI
COORDINATES: similar to AA sequence:RefSeq:WP_008308375.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517453.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030893.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966583.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188576.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594302.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517448.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188574.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594305.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966574.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188572.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224935.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308393.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538723.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517427.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308414.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008368050.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014030866.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014030865.1
COORDINATES: similar to AA sequence:RefSeq:WP_004040864.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224944.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004594319.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308429.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188558.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538688.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005538686.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_005538684.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308439.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308440.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308441.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004966546.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007188552.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008308444.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014051116.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004043159.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014723.2
COORDINATES: similar to AA sequence:RefSeq:WP_004966536.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182977.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004966534.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222230.1
COORDINATES: similar to AA sequence:RefSeq:WP_014041344.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011225073.1
COORDINATES: similar to AA sequence:RefSeq:WP_008583061.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555220.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225070.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966523.1
COORDINATES: similar to AA sequence:RefSeq:WP_006627987.1
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: similar to AA sequence:RefSeq:WP_005538618.1
COORDINATES: similar to AA sequence:RefSeq:WP_007543934.1
type IV pilin N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF026913.2
COORDINATES: similar to AA sequence:RefSeq:WP_008313850.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004966779.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225067.1
COORDINATES: similar to AA sequence:RefSeq:WP_008364908.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225066.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_008012085.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966506.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006111614.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004966504.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225059.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594343.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225056.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225055.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966820.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611118.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007545048.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
DpnII family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_007189620.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011225053.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188052.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004966493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966492.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030776.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030996.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966098.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966487.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966486.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007190015.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030760.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188884.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: similar to AA sequence:RefSeq:WP_014030759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225016.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030595.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313828.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011222262.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_005532655.1
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_008605325.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189717.1
TaqI-like C-terminal specificity domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005533749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533747.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966076.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966074.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966073.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966072.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189739.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408582.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188962.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966206.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533539.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966202.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966200.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762752.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762751.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007978818.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_007189580.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011222229.1
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004966197.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592346.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030686.1
transcription initiation factor IIB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004966431.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592349.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533521.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966173.1
COORDINATES: similar to AA sequence:RefSeq:WP_008008921.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF012722.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011570370.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030695.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966420.1
COORDINATES: similar to AA sequence:RefSeq:WP_012660098.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966418.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056186.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008523865.1
COORDINATES: similar to AA sequence:RefSeq:WP_018256135.1
COORDINATES: similar to AA sequence:RefSeq:WP_006430938.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257457.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257456.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004591890.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056362.1
COORDINATES: protein motif:HMM:NF013696.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018257453.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555785.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694804.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571279.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006186857.1
COORDINATES: similar to AA sequence:RefSeq:WP_008894355.1
COORDINATES: similar to AA sequence:RefSeq:WP_008003556.1
COORDINATES: similar to AA sequence:RefSeq:WP_014031049.1
COORDINATES: similar to AA sequence:RefSeq:WP_006112859.1
COORDINATES: similar to AA sequence:RefSeq:WP_017344004.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365527.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385105.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594486.1
COORDINATES: similar to AA sequence:RefSeq:WP_018256125.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188448.1
pyridine nucleotide-disulfide oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018256128.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056184.1
COORDINATES: similar to AA sequence:RefSeq:WP_018256131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060663.1
COORDINATES: similar to AA sequence:RefSeq:WP_014556126.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327182.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980058.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_006432505.1
GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004516241.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592324.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011222290.1
IS6-like element ISH17 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_008313500.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966369.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_004973037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182387.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043318.1
IS1595-like element ISHja1 family transposase
COORDINATES: protein motif:HMM:NF012200.0
choice-of-anchor D domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005537268.1
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006065875.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004967081.1
COORDINATES: similar to AA sequence:RefSeq:WP_014041151.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533834.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004592352.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966347.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313473.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_005538575.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966344.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516573.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188988.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966868.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008442674.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966865.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966864.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004966863.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030790.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966861.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053455.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966858.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313916.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225048.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966100.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966855.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225044.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966853.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966852.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030771.1
COORDINATES: similar to AA sequence:RefSeq:WP_011322692.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004966850.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014030769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030768.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030767.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004966845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571359.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308581.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966840.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966839.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966836.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966835.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308568.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289254.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011225030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966832.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966831.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966830.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062744.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225025.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308565.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190041.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966082.1
COORDINATES: protein motif:HMM:NF024854.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008313841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014554910.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225012.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533629.1
COORDINATES: similar to AA sequence:RefSeq:WP_006828030.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012660341.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062141.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004966807.1
COORDINATES: similar to AA sequence:RefSeq:WP_008452501.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055796.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555759.1
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_005533802.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005533800.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533799.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533798.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966784.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004966782.1
COORDINATES: similar to AA sequence:RefSeq:WP_008306867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008311410.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592297.1
COORDINATES: similar to AA sequence:RefSeq:WP_004599330.1
COORDINATES: similar to AA sequence:RefSeq:WP_011324502.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444080.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516568.1
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_007190008.1
COORDINATES: similar to AA sequence:RefSeq:WP_004965308.1
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_006885755.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143856.1
COORDINATES: similar to AA sequence:RefSeq:WP_008526969.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592163.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222288.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043133.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007143037.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_014030714.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012660064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143040.1
GO:0003674 - molecular_function [Evidence IEA]
type I-B CRISPR-associated protein Cas5b
COORDINATES: similar to AA sequence:RefSeq:WP_004043127.1
type I-B CRISPR-associated protein Cas7/Csh2
COORDINATES: similar to AA sequence:RefSeq:WP_012660067.1
type I-B CRISPR-associated protein Cas8b/Csh1
COORDINATES: similar to AA sequence:RefSeq:WP_007143043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222294.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222295.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222296.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189976.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222140.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222170.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966746.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189968.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004592174.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030754.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592168.1
COORDINATES: similar to AA sequence:RefSeq:WP_005532610.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966737.1
COORDINATES: similar to AA sequence:RefSeq:WP_005532614.1
COORDINATES: similar to AA sequence:RefSeq:WP_006627886.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222120.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533598.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004965365.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188926.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188927.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190839.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189614.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966717.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189616.1
COORDINATES: similar to AA sequence:RefSeq:WP_005532710.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222252.1
IS4-like element ISHma1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_013035688.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313922.1
IS630-like element ISHam1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_010903158.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414027.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: similar to AA sequence:RefSeq:WP_007695808.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012807619.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_014053461.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376269.1
COORDINATES: protein motif:HMM:NF019380.2
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008385679.1
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594939.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009376275.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376281.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044622.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376293.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181027.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190503.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966684.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190504.1
phosphoenolpyruvate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004966682.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224960.1
Tm-1-like ATP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011224959.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190507.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190508.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966677.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594333.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190514.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222305.1
IS6-like element ISH15 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004966672.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596943.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011222227.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006183554.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088222.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847605.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_004966661.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966659.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222655.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966658.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007187982.1