Methylorubrum extorquens DM4 plasmid p2METDI, complete sequence.
type: Entry
definition: Methylorubrum extorquens DM4 plasmid p2METDI, complete sequence.
sequence version: NC_012989.1
sequence date: 2023-05-16
sequence: sequence
division: CON
label: NC_012989.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA3138288
keyword: RefSeq
keyword: Complete genome
source: Methylorubrum extorquens DM4
organism: Methylorubrum extorquens DM4
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylorubrum.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFP103044.1.\nAnnotation results relative to BLAST similarities, COG\nassignations, enzymatic function prediction (PRIAM software), TMHMM\nand SignalP predictions, and synteny conservation (Syntonizer\nsoftware) are available in the MicroScope annotation system\nhttp://www.genoscope.cns.fr/agc/microscope.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/16/2023 02:38:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,821\nCDSs (total) :: 5,744\nGenes (coding) :: 5,561\nCDSs (with protein) :: 5,561\nGenes (RNA) :: 77\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 4\nPseudo Genes (total) :: 183\nCDSs (without protein) :: 183\nPseudo Genes (ambiguous residues) :: 0 of 183\nPseudo Genes (frameshifted) :: 56 of 183\nPseudo Genes (incomplete) :: 147 of 183\nPseudo Genes (internal stop) :: 34 of 183\nPseudo Genes (multiple problems) :: 46 of 183\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38579
topology: circular
so has quality: SO_0000988
location: 1..38579
location: region:1-38579:1
RO_0002162: 661410

NC_012989
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA3138288
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Genoscope -, C.E.A.
journal: Submitted (09-OCT-2017) Genoscope - CEA (Commissariat a l'energie atomique et aux energies alternatives) : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38579:1
position: 38579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38579:1:source
so part of: sequence
organism: Methylorubrum extorquens DM4
mol type: genomic DNA
strain: DM4
type material: type strain of Methylobacterium dichloromethanicum
plasmid: p2METDI

661410
type: Taxonomy
SIO_000068: taxonomy

METD_RS28045
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28045
old locus tag: METD_P2METDI0001
so part of: sequence
location: join(38204..38579,1..1034)
location: region:1-38579:1
so has part: feature:38204-38579:1:exon
so has part: feature:1-1034:1:exon
subclass of: SO_0000010

72992721
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:38204-38579:1:exon

position:38204:1
position: 38204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1034:1:exon

position:1034:1
position: 1034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METD_RS28045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28045
old locus tag: METD_P2METDI0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009466936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
translation: MNRENRTFAEIRPGDSAELMRTCTADDFFVFATASGNHNPMHLPEHDHDGDGVKDEPIAPAMWVGSLISAVLGNILPGPGTLYRAQDLQFLGHARAGDDLVARVTVLEKHDDGRVRLATIVERPSDRATLVRGEALVQAPSVKLSFDDLDLPGLVVQRHRHFDALLERARVLPPLTVAVVAPEEPNSLGGALLAAEHHLITPIFVGDRTRIEAAAREIGRSITQVEIVDTSWHIAAANKAVDLIAAGRAQALMKGHLHTDDLLRAALRKDNGLRRGRRLTHVFVMDVPGLTHPLLVTDAAINITPDLMTKVDIVQNAIDLAVSLGIPEPKVGILSAVETVNPAIPSSVDAALLSKMAERGQIKGGIVDGPLAMDNALDLKAARTKGISSVVAGQAEVLVVPGLDAGNMLAKQLTYISKAEGAGLVMGAKVPIIMTSRADGEKARLASCAVAAVHHARVSSNTVAELAQQ
SIO_010081: METD_RS28045
subclass of: SO_0000673
so part of: METD_RS28045
location: join(38204..38579,1..1034)
location: region:1-38579:1
so has part: feature:38204-38579:1:exon
so has part: feature:1-1034:1:exon

WP_041359192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38204-38579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1034:1:exon

METD_RS28050
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28050
old locus tag: METD_P2METDI0002
old locus tag: p2METDI0002
so part of: sequence
location: 1031..2206
location: region:1031-2206:1
so has part: feature:1031-2206:1:exon
subclass of: SO_0000010

72992722
type: Gene
SIO_000068: ncbigene

position:1031:1
position: 1031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2206:1
position: 2206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031-2206:1:exon

METD_RS28050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28050
old locus tag: METD_P2METDI0002
old locus tag: p2METDI0002
EC number: 2.7.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013069069.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008776 - acetate kinase activity [Evidence IEA]
GO process: GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate/propionate family kinase
translation: MSRSIALTLNAGSSSLKFAVYDIARGEPEELATGLIERIGDRPRIKMKAGGELFESRDLDARETDAPTSTLDIVLTFLQEHLGELNVTAVGHRVVHGGPHYAVPVLVTRAMLDELRALSSFAPLHQPHNIAGIEAALTAFPEAIQVACFDTAFHRHQPKVNDVFALPREYYDKGVRRYGFHGLSYEYIAGELKRIAPLLYDGRVVVAHLGNGASMCAMLGGRSIASTMGFTALDGLPMGTRCGQIDPGVVFYLVQQEGKTIDEVRELFYSKSGLLGLSGLSNDMRTLEAAATPEAMEAIDYFVFRIRRELGGLAAALGGIDALVFCGGIGENSRYIRERVCEGLDWIGIELDRERNKANERRINGSFSRTHVLVIPTNEEIVIARAVKTFT
SIO_010081: METD_RS28050
subclass of: SO_0000673
so part of: METD_RS28050
location: 1031..2206
location: region:1031-2206:1
so has part: feature:1031-2206:1:exon

WP_012779271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031-2206:1:exon

METD_RS30845
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS30845
so part of: sequence
location: complement(2379..2765)
location: region:2379-2765:-1
so has part: feature:2379-2765:-1:exon
subclass of: SO_0000010

72993051
type: Gene
SIO_000068: ncbigene

position:2379:-1
position: 2379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2765:-1
position: 2765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379-2765:-1:exon

METD_RS30845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS30845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSISSNYSRPAEEKRSYGSIEEHKQTGPTDESAASKHTFIALTNAVRVFELSLDHMHEIGAYFVSDAGGRTFHVRRISQSGSLIIFEGMFDGHPIHLVKHYTQVNIALTALPKISAEPVRIGFVVGN
SIO_010081: METD_RS30845
subclass of: SO_0000673
so part of: METD_RS30845
location: complement(2379..2765)
location: region:2379-2765:-1
so has part: feature:2379-2765:-1:exon

WP_133091956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2379-2765:-1:exon

METD_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28055
old locus tag: METD_P2METDI0003
old locus tag: p2METDI0003
so part of: sequence
location: complement(3132..4097)
location: region:3132-4097:-1
so has part: feature:3132-4097:-1:exon
subclass of: SO_0000010

72992723
type: Gene
SIO_000068: ncbigene

position:3132:-1
position: 3132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097:-1
position: 4097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132-4097:-1:exon

METD_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28055
old locus tag: METD_P2METDI0003
old locus tag: p2METDI0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003598531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MGPIAEAVTAAGGSLRRVFGRAQMPLTLLDTPDRLILLRDQLKLVEAAIREIGDPALPARLSMQTGIAGLGPIGLQVQSAETLQAAVARVRSVMPCLLQTATSTGLYRQGAQAFYGYAVTERIESGRQANEILALGYLLGTVRHFLGPTWRPARGVVTGASLGAREEIETLLGCEITLGSRAGLVFSSHCLLIPNPKRYDPVTTEAADNEPIGDDIAACVAHMIELGLDEARPSIDGIARRLGMSRRTLQRRLEEAGTRYADIQRAVLVRRAKALLSGEALSIGRIAIELGYADAAHFTRAFLEWTGVTPSQWRRSFSEPS
SIO_010081: METD_RS28055
subclass of: SO_0000673
so part of: METD_RS28055
location: complement(3132..4097)
location: region:3132-4097:-1
so has part: feature:3132-4097:-1:exon

WP_244414150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3132-4097:-1:exon

METD_RS28060
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28060
old locus tag: METD_P2METDI0004
old locus tag: p2METDI0004
so part of: sequence
location: 4282..4743
location: region:4282-4743:1
so has part: feature:4282-4743:1:exon
subclass of: SO_0000010

72992724
type: Gene
SIO_000068: ncbigene

position:4282:1
position: 4282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4743:1
position: 4743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282-4743:1:exon

METD_RS28060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28060
old locus tag: METD_P2METDI0004
old locus tag: p2METDI0004
function: 12 : Regulatory functions
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019867088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPEDAMATLPFDDTNITWQTIEGFDHAAYHILSVDEDARIVDLLFKFAANERIALHRHGAAYRTLVLQGELRIYRPNGELKESRPVGSYVAGRAGGEPHTEGGGDQDVIVYFTNRDIAGPVYEILDEHHAVVATFGIPEFKALYEAQISRAA
SIO_010081: METD_RS28060
subclass of: SO_0000673
so part of: METD_RS28060
location: 4282..4743
location: region:4282-4743:1
so has part: feature:4282-4743:1:exon

WP_012779273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4282-4743:1:exon

METD_RS28065
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28065
old locus tag: METD_P2METDI0005
old locus tag: p2METDI0005
so part of: sequence
location: 4743..5339
location: region:4743-5339:1
so has part: feature:4743-5339:1:exon
subclass of: SO_0000010

72992725
type: Gene
SIO_000068: ncbigene

position:5339:1
position: 5339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743-5339:1:exon

METD_RS28065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28065
old locus tag: METD_P2METDI0005
old locus tag: p2METDI0005
inference: COORDINATES: protein motif:HMM:NF023113.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2380 domain-containing protein
translation: MLQGSSFLPMIGRNTMARLDVLACMLPGKRLLPQISAIGLLLAALAPSPAGSAERRPIPLSVLPLKLLDTSNEPTDQSAQHAARLARMADSLAIDLTRSGLFQATAVSADHLLRSCPSGEAECLLRAAREEGAELIFVGVVHKSSTLILQLWARLVDARTGRDVLARDLNFRGDTDEAWQRAETFLVAQIRDAVALAR
SIO_010081: METD_RS28065
subclass of: SO_0000673
so part of: METD_RS28065
location: 4743..5339
location: region:4743-5339:1
so has part: feature:4743-5339:1:exon

WP_012779274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4743-5339:1:exon

METD_RS28070
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28070
old locus tag: METD_P2METDI0006
old locus tag: p2METDI0006
so part of: sequence
location: complement(5606..6517)
location: region:5606-6517:-1
so has part: feature:5606-6517:-1:exon
subclass of: SO_0000010

72992726
type: Gene
SIO_000068: ncbigene

position:5606:-1
position: 5606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6517:-1
position: 6517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5606-6517:-1:exon

METD_RS28070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28070
old locus tag: METD_P2METDI0006
old locus tag: p2METDI0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019903082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine kinase
translation: MSDIDLHALCQHYGRVFTDCALVVPGANRTYRLTSDDNTYYLRLYRPTGRSAAEIAFEMRLLHEARQTPGIDVARPIPTADGADCARLLFDGVDRVVGLFHALNGRPIAAEPEDVALFGSALARLHGALAGIEAGSARPLDPATLCAHSDVSLARISGSETVRRALDRCRVEMLGDPATHDLPSGNCHGDARLANAIARDSTIGFFDFDDCGRGPYVLDLGTAAWHFVRGDPAKTAVLIAALLAGYERVRPLSVTERRALPHFVKLAEMRALLFLAEFCILADDLWPHVLDHATAVLDSELRF
SIO_010081: METD_RS28070
subclass of: SO_0000673
so part of: METD_RS28070
location: complement(5606..6517)
location: region:5606-6517:-1
so has part: feature:5606-6517:-1:exon

WP_012779275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5606-6517:-1:exon

METD_RS28075
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28075
old locus tag: METD_P2METDI0007
old locus tag: p2METDI0007
so part of: sequence
location: 6731..7315
location: region:6731-7315:1
so has part: feature:6731-7315:1:exon
subclass of: SO_0000010

72992727
type: Gene
SIO_000068: ncbigene

position:6731:1
position: 6731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7315:1
position: 7315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6731-7315:1:exon

METD_RS28075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28075
old locus tag: METD_P2METDI0007
old locus tag: p2METDI0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012753468.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTEDQNLDLQRDALKAAGCIRIFEEKESGRAGTKRPALEAALDFLRAEDQLVVWKIDRLGRSLREMLDTAHMLQERGVKLRSLTEQVDTETATGRMMFNFLGTIAEYFLDLNRERTLAGLKAAVARGRKGGRPRKITDADLEAGRAMLAAGTIPVAEIAKRLGVSRKTFYLYFPQARARSQAQAKG
SIO_010081: METD_RS28075
subclass of: SO_0000673
so part of: METD_RS28075
location: 6731..7315
location: region:6731-7315:1
so has part: feature:6731-7315:1:exon

WP_041359194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6731-7315:1:exon

METD_RS28080
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28080
old locus tag: METD_P2METDI0008
old locus tag: p2METDI0008
so part of: sequence
location: 7320..7760
location: region:7320-7760:1
so has part: feature:7320-7760:1:exon
subclass of: SO_0000010

72992728
type: Gene
SIO_000068: ncbigene

position:7320:1
position: 7320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7760:1
position: 7760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7320-7760:1:exon

METD_RS28080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28080
old locus tag: METD_P2METDI0008
old locus tag: p2METDI0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017482494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRPENRFFYPIDWAQLSDVIRFGRAKGYCEGCGRPHGQLVFHLGDGRWWDAAGQTWRSSKGRPLKLAPLECLPAGTVIETTRVYLACAHLDHDPGNNDPKNLKALCQRCHILHDRTEHLRQRWFTYRARRASGDLFLGPYPFRY
SIO_010081: METD_RS28080
subclass of: SO_0000673
so part of: METD_RS28080
location: 7320..7760
location: region:7320-7760:1
so has part: feature:7320-7760:1:exon

WP_012779277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7320-7760:1:exon

METD_RS28085
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28085
old locus tag: METD_P2METDI0009
old locus tag: p2METDI0009
so part of: sequence
location: 7931..8596
location: region:7931-8596:1
so has part: feature:7931-8596:1:exon
subclass of: SO_0000010

72992729
type: Gene
SIO_000068: ncbigene

position:7931:1
position: 7931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8596:1
position: 8596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7931-8596:1:exon

METD_RS28085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28085
old locus tag: METD_P2METDI0009
old locus tag: p2METDI0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017482495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLESISLRKLLKIGFARPNRRQGALREIIRQDRARAAGPVDEGGDFYGPFWADAKAHVFGTRDLHEATTGRVADNRNRHRLYPLLREGFLGWWNPYRRGTNEPFRLGPVQRTRFEVLSLASTVKVDNILSIEDGLGGLHYVYPYFAEAPALGDEAAQLGLWLLGRALPDLPADRLRLLDVFRGQAFSIADTALQGDEEERFHRMYAGLIQERNTLRGPPG
SIO_010081: METD_RS28085
subclass of: SO_0000673
so part of: METD_RS28085
location: 7931..8596
location: region:7931-8596:1
so has part: feature:7931-8596:1:exon

WP_041359196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7931-8596:1:exon

METD_RS28090
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28090
old locus tag: METD_P2METDI0011
old locus tag: p2METDI0011
so part of: sequence
location: 8957..9733
location: region:8957-9733:1
so has part: feature:8957-9733:1:exon
subclass of: SO_0000010

72992730
type: Gene
SIO_000068: ncbigene

position:8957:1
position: 8957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9733:1
position: 9733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8957-9733:1:exon

METD_RS28090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28090
old locus tag: METD_P2METDI0011
old locus tag: p2METDI0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018867178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3800 domain-containing protein
translation: MLANGHASRYRRLMAFSDYVVFVDESGDHGLKTINPEYPVFVLAFCICRKDAYVQHIVPLIHQLKFDFWGHDAVVLHSHEIRKSKGDFAQLLVPEIRAAFQERITAVMQEAEFTLIAAVINKEQLVRRYAQPNDPYEIALAFCIERLQMFLQERGQTDRQTHLLVECRGKAEDDKLELEFRRICDGANRVGALPNLDIRFVDKKHNSPGLQLADLVAYPVGRHVLKPDQPNRAYEVVERKFRQSPTGRIPGYGLKLFP
SIO_010081: METD_RS28090
subclass of: SO_0000673
so part of: METD_RS28090
location: 8957..9733
location: region:8957-9733:1
so has part: feature:8957-9733:1:exon

WP_012779280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8957-9733:1:exon

METD_RS28095
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28095
old locus tag: METD_P2METDI0012
old locus tag: p2METDI0012
so part of: sequence
location: 10197..10943
location: region:10197-10943:1
so has part: feature:10197-10943:1:exon
subclass of: SO_0000010

72992731
type: Gene
SIO_000068: ncbigene

position:10197:1
position: 10197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10943:1
position: 10943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10197-10943:1:exon

METD_RS28095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28095
old locus tag: METD_P2METDI0012
old locus tag: p2METDI0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012753462.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAKGTWQTVYLVRQTINHLPPILTVRKDAPMHVLAIVSQKGGTGKSTLAFSLAVAAEEQGLRTSIIDIDPQGTTKKWYSRREAETGPEVNALSVNQLEAAMPLLRKQGVQLVIIDTPGADTPGVTAAIQLADLCLIPARPSVADIEASAPTVSAIHRLGKPFSYVLNQCPPGRSIRTTDAFRVLQLTGAVASTPLALRADHMDALATGQGVTERDPNSKAAGEIRELLTWTLNRMEGKPHGQKQTRVA
SIO_010081: METD_RS28095
subclass of: SO_0000673
so part of: METD_RS28095
location: 10197..10943
location: region:10197-10943:1
so has part: feature:10197-10943:1:exon

WP_244414152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10197-10943:1:exon

METD_RS28100
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28100
old locus tag: METD_P2METDI0013
so part of: sequence
location: 10915..11214
location: region:10915-11214:1
so has part: feature:10915-11214:1:exon
subclass of: SO_0000010

72992732
type: Gene
SIO_000068: ncbigene

position:10915:1
position: 10915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11214:1
position: 11214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10915-11214:1:exon

METD_RS28100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28100
old locus tag: METD_P2METDI0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017482499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARNRPASLEAALGGALPQEPTAETATIVQHPANPVGAPAPKAKNYEQVVAYVPTACKKRLRMMCIEHDRDLNSFIREGIDLMLAKYGQPSLKEFEAKS
SIO_010081: METD_RS28100
subclass of: SO_0000673
so part of: METD_RS28100
location: 10915..11214
location: region:10915-11214:1
so has part: feature:10915-11214:1:exon

WP_041359198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10915-11214:1:exon

METD_RS28105
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28105
old locus tag: METD_P2METDI0014
old locus tag: p2METDI0014
so part of: sequence
location: 11389..12399
location: region:11389-12399:1
so has part: feature:11389-12399:1:exon
subclass of: SO_0000010

72992733
type: Gene
SIO_000068: ncbigene

position:11389:1
position: 11389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12399:1
position: 12399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11389-12399:1:exon

METD_RS28105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28105
old locus tag: METD_P2METDI0014
old locus tag: p2METDI0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012753460.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPTRPLTPEEEQRLARKERTLKNRRGRRNPSTMPQHLARTSAFAPRKKDLITDSNFVRIYEVPGYSVVEVKGRELGSQHRDAIYALFRLPREKVRTDNPAYRRGTFISPVLSYYQTRTTWRTLIKAMGRTEHVNNLLSLVHVFQEIQQVSVLIHEGRSLKELEAIKAKRNRNMLPDGAGSASSLITDLTWEGAQLDSAVTVTYGARVLEMIEKAHLVSINADVQFRLKSDHAKVFWPFIDSQPEHTYIDEERLAQLAGRELWSDTATSATRAQFRKECREAFKDMVGAGGLSAFTEEVTGSGRAKSRRYSYTHAAPRQFELELQKAAQNAQGVDA
SIO_010081: METD_RS28105
subclass of: SO_0000673
so part of: METD_RS28105
location: 11389..12399
location: region:11389-12399:1
so has part: feature:11389-12399:1:exon

WP_017482500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11389-12399:1:exon

METD_RS28110
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28110
old locus tag: METD_P2METDI0015
old locus tag: p2METDI0015
so part of: sequence
location: 12609..13877
location: region:12609-13877:1
so has part: feature:12609-13877:1:exon
subclass of: SO_0000010

72992734
type: Gene
SIO_000068: ncbigene

position:12609:1
position: 12609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13877:1
position: 13877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12609-13877:1:exon

METD_RS28110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28110
old locus tag: METD_P2METDI0015
old locus tag: p2METDI0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012319572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISMex3 family transposase
translation: METPTNIVRLRQPEDLDDPLTEVLRAGARRLLAQAVEMEADAFLSAMQDLRLPDGRARLVRHGHGPERAIQTGIGPVPVARVRVRDRGASGSEDRVRFTSTLLPKWARRTRSLDALLPVLYLRGVSTGDFQEALAALLGRDAPNLSPAVIARLTAAWADEYARWQGRDLSARRYVYVWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQVGVRESAQSWRELLVDVKRRGLSIAPEIAVGDGALGFWQALDEVFPGTAHQRCWVHKAANVLDKVPKSVQGAMKVDLREIHGAPTRAAAEAALAVFVEKYGAKYPRAATCLTKDREALLAFYDFPAEHWDHLRSSNPIESVFATVRHRTVRTKGALSATTAKLMVFKLVMAASKTWRRLKGENQLPKVVAGVIFRDGTEVTASPDHRAA
SIO_010081: METD_RS28110
subclass of: SO_0000673
so part of: METD_RS28110
location: 12609..13877
location: region:12609-13877:1
so has part: feature:12609-13877:1:exon

WP_009867550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12609-13877:1:exon

METD_RS28115
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28115
old locus tag: METD_P2METDI0017
so part of: sequence
location: 15388..15723
location: region:15388-15723:1
so has part: feature:15388-15723:1:exon
subclass of: SO_0000010

72992735
type: Gene
SIO_000068: ncbigene

position:15388:1
position: 15388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15723:1
position: 15723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15388-15723:1:exon

METD_RS28115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28115
old locus tag: METD_P2METDI0017
inference: COORDINATES: protein motif:HMM:NF024830.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4113 domain-containing protein
translation: MRLTIGTSDTARLIRAALWGLRGIYKPGFRYKKCGILLLDLHPAEAEQGSLFLRPDRAERSALMQAMDALNARYGRDRVRYACSGQDRPWKLRAEYLSQRYTTRWGELLRV
SIO_010081: METD_RS28115
subclass of: SO_0000673
so part of: METD_RS28115
location: 15388..15723
location: region:15388-15723:1
so has part: feature:15388-15723:1:exon

WP_050983445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15388-15723:1:exon

METD_RS29850
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS29850
old locus tag: METD_P2METDI0018
old locus tag: p2METDI0018
so part of: sequence
location: complement(15726..17108)
location: region:15726-17108:-1
so has part: feature:15726-17108:-1:exon
subclass of: SO_0000010

72992916
type: Gene
SIO_000068: ncbigene

position:15726:-1
position: 15726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17108:-1
position: 17108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15726-17108:-1:exon

METD_RS29850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS29850
old locus tag: METD_P2METDI0018
old locus tag: p2METDI0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYDISSDLQTFYDTHVRLGKVLRDDLAAKRDLNLNRLYGGLDDLAAESGFSRPHPYTWHNQGSYAMHTLNQDPADLNDYDIDVGLMFNKDDLPSDSQKARQRIADALTKRCTNFTQAPAAKKNAVRVAYADGYHIDFAVYRTYTDATGTLRTEHASTEWKPRDPTAINKWFSDCVTNKIPTAWPAIGYYPKVKDGQFRRIVRFLKWFSRSRPSWSLPGGLIISALVAEVYASDSNRDDRALYDTIVALANRLNGNTKVYNPVTQAEFTENSEIQSQVNRLKTQINMAVAKLAPLFDQQNCTRDKARSAWDWVFNHQFWAGKEKVQKAALDEELNASALAPYYVKIKCELSGTYGGKTYREYASGGGVLQKNTYLKFTVLGTNVPSPYLITWETRNSGDEASDDNALLSITQPSHGYSYWTGTAYKGNHQMVCKITRNGIVVAQTSHLVRVAAGKWWSRSR
SIO_010081: METD_RS29850
subclass of: SO_0000673
so part of: METD_RS29850
location: complement(15726..17108)
location: region:15726-17108:-1
so has part: feature:15726-17108:-1:exon

WP_244414154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15726-17108:-1:exon

METD_RS29855
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS29855
old locus tag: METD_P2METDI0019
old locus tag: p2METDI0019
so part of: sequence
location: complement(17129..18208)
location: region:17129-18208:-1
so has part: feature:17129-18208:-1:exon
subclass of: SO_0000010

72992917
type: Gene
SIO_000068: ncbigene

position:17129:-1
position: 17129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18208:-1
position: 18208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17129-18208:-1:exon

METD_RS29855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS29855
old locus tag: METD_P2METDI0019
old locus tag: p2METDI0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAVED domain-containing protein
translation: MMKLIRRIRGKEEPNDPLPGTSYRVTGGALVLAGLAVISPGVKDALLALANNTYNLGLSLDAPWWIGLPLVSLGLLLFILGFVTDRSGTNKGQFVAIRHQSFQPLAANLPKEAMPRRMQRRKIQVYDCDLSSFMNSQPVDPAGAVRLQEKLAQHIAGVRRSDHDAALGYYGIVHIPFQFLAGCSISTYPEVALFELNRNTNQWHELNTGDGTNLKPKLIRSIDPANPTAAVIRIEISYPISPAEPAKLIQGPYREYALRIEAPGIDKISHYGQVHTVSKLFREALDEIHNELGNAPIVHVFYSGPVSLGFSLGRQISRTIHNRVFVYNYTSQSNPAYAWGIDVTRDSPPHEMVVWTRLV
SIO_010081: METD_RS29855
subclass of: SO_0000673
so part of: METD_RS29855
location: complement(17129..18208)
location: region:17129-18208:-1
so has part: feature:17129-18208:-1:exon

WP_012779286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17129-18208:-1:exon

METD_RS28120
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28120
old locus tag: METD_P2METDI0020
old locus tag: p2METDI0020
so part of: sequence
location: complement(18372..19175)
location: region:18372-19175:-1
so has part: feature:18372-19175:-1:exon
subclass of: SO_0000010

72992736
type: Gene
SIO_000068: ncbigene

position:18372:-1
position: 18372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19175:-1
position: 19175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18372-19175:-1:exon

METD_RS28120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28120
old locus tag: METD_P2METDI0020
old locus tag: p2METDI0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012316969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPNAKLNFDRAAQALGLDAATRDLAWRRMMDIGLTPDDPTVVYLAVGGLLEQAARTIPAALDTVPERVEQAAARAVGPVADAASVRVEAAHAALAERTGAAVAEAAAAHLTRIERTRMREAGFWAAALVLVCAFLCGGAGYWLGRGDTQDLDAKWARLTQRADAGAWLALVAANPDLRGQMNQSCNPTQLKLDAASKRRYCELPLWTEGSVAPVGGVPEVLYLNLREWLIAWGPAWLMLGAGLAALLGRRLLRGVAVWRPVAWLLD
SIO_010081: METD_RS28120
subclass of: SO_0000673
so part of: METD_RS28120
location: complement(18372..19175)
location: region:18372-19175:-1
so has part: feature:18372-19175:-1:exon

WP_041359201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18372-19175:-1:exon

METD_RS28125
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28125
old locus tag: METD_P2METDI0021
old locus tag: p2METDI0021
so part of: sequence
location: complement(19196..20026)
location: region:19196-20026:-1
so has part: feature:19196-20026:-1:exon
subclass of: SO_0000010

72992737
type: Gene
SIO_000068: ncbigene

position:19196:-1
position: 19196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20026:-1
position: 20026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19196-20026:-1:exon

METD_RS28125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28125
old locus tag: METD_P2METDI0021
old locus tag: p2METDI0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012316970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division plane positioning ATPase MipZ
translation: MARAQQTRAPAASRQKRVVLITSEKGGVGKSVTARTLIEHLRASGTRVAAYDADGGVGALLRVLGSRDPDGELLAEQDPAAGVGYYNIRADDERPTLLNCAASGEPLIVHDLAGGSLADLARISDMGEGLDDLLAAFAGQGYRPVVLHLISSEVAATQSVARWLELAGDRVDHVAIRNTRWGKAEADFPFWHGYVDGRGESRGGKVRRRLLDELGGLEISLPALPGGTFAKIDADALPFRVAADAPRLTIAERSHVTRYLRESAVAFEPLRPLLGL
SIO_010081: METD_RS28125
subclass of: SO_0000673
so part of: METD_RS28125
location: complement(19196..20026)
location: region:19196-20026:-1
so has part: feature:19196-20026:-1:exon

WP_012779288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19196-20026:-1:exon

METD_RS28130
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28130
old locus tag: METD_P2METDI0022
old locus tag: p2METDI0022
so part of: sequence
location: complement(20077..20514)
location: region:20077-20514:-1
so has part: feature:20077-20514:-1:exon
subclass of: SO_0000010

72992738
type: Gene
SIO_000068: ncbigene

position:20077:-1
position: 20077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20514:-1
position: 20514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20077-20514:-1:exon

METD_RS28130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28130
old locus tag: METD_P2METDI0022
old locus tag: p2METDI0022
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEAAEPDPHDELRAFLREQVRLTPSRKPSGYASVKAVLPEIKALKAKRRTDAEIQEMLARMGVTLGLATLRQYIQNASRELAGHKPARRRGKAVAHPPATTSPAPAQHQSTLVHPPAAAREPLPAGGRASAARTVGHRLSTKDL
SIO_010081: METD_RS28130
subclass of: SO_0000673
so part of: METD_RS28130
location: complement(20077..20514)
location: region:20077-20514:-1
so has part: feature:20077-20514:-1:exon

WP_012779289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20077-20514:-1:exon

METD_RS28135
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28135
old locus tag: METD_P2METDI0023
old locus tag: p2METDI0023
so part of: sequence
location: 20799..21098
location: region:20799-21098:1
so has part: feature:20799-21098:1:exon
subclass of: SO_0000010

72992739
type: Gene
SIO_000068: ncbigene

position:20799:1
position: 20799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21098:1
position: 21098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20799-21098:1:exon

METD_RS28135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28135
old locus tag: METD_P2METDI0023
old locus tag: p2METDI0023
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRPVRVALDEALWVAVEAAARARGIAPYLFVEEALIAALGPSETVAQLAELAEAAGASAREARASAAEMRDQIQVIADFIVDLYRAEARASDDAGQV
SIO_010081: METD_RS28135
subclass of: SO_0000673
so part of: METD_RS28135
location: 20799..21098
location: region:20799-21098:1
so has part: feature:20799-21098:1:exon

WP_012779290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20799-21098:1:exon

METD_RS28495
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
gene: mobF
locus tag: METD_RS28495
old locus tag: METD_P2METDI0024
old locus tag: p2METDI0024
so part of: sequence
location: 21119..24472
location: region:21119-24472:1
so has part: feature:21119-24472:1:exon
subclass of: SO_0000010

72992780
type: Gene
SIO_000068: ncbigene

position:21119:1
position: 21119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24472:1
position: 24472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21119-24472:1:exon

METD_RS28495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
gene: mobF
locus tag: METD_RS28495
old locus tag: METD_P2METDI0024
old locus tag: p2METDI0024
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MMTCTRITSVEYYESMARQIRREAGLSPPDSPLDDTAAAYARKIADAAAAEGSAAYEAAYTAAFDRALATLRQGHTEGRDQVAYYTDNGAGEANGVWWTRGSGSEVGPGRFGDPFRLCPDGGDVDGRVLRDLAAGRDPESLEPLVRASANGGRSVGYDLQFAAPKSVSVLAAFAGPEERARILAAHDRAVHRALDYAHAAGLIVTRTGAQGRHHAPAAGVSAAVYRHFTSRAQDPQLHSHAVLLNLCVRADGSTGGLDNRAILKNAGGIAALYRSELASGLRSGLGYEAVRAGRNFEIAGVAEPVLELFSKRRAAIERVARERGFETSKDRAAAQAAAFDTRARKNREMPLAALEAEWERQLVQAGWARGAVFEGVRIAADGIREARVGPAAERRQRLAEAGLTGALAMQAVVEERDLVRRVAEALQCEAGADAVLDEVERLCRDGGVVAVGRTAEGEAVYATPEMIEAERGMLRRAYGRQDERAFVPEAVVRRVLLERPSLRAEQRAAVRHALNRDGVSVIEGSAGSGKSYAMASVAEAVRACGGEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRIDKGEITLGPETTVIADEAGMIGTRDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAPMRLLVRALGAARMDEIQRQRGRSESEGAWMRAASIDFAAGRTARALEAYDRGGAITWGGDREATIQALVDAYAVSRRDPEGAERTRAVLTGWNKDVRALNARIRDRLKQDGLLPEGADVEIAAIPRGGSQAEPVSLTVGDEVMFGESVEVEGQMIRNADLARIEALSGDPDDPMLTLRLAKSGARLSVRASALVGFREPGEPRVPRLQHSYAMTTHASQGVTVDEAFVADLRGTGAEATYVAMTRHRRSSRLFVDTDRIRERLEAARSGIRPEERGLTSGRGAARAELTPLGHSEIRQAYLAESASSGGKTNIADFAGSDLRGWCGAPVRSYDVPVPPGGRMGLRHEGAWREAIAGIAPLPDREPSLVAQALRQRIGERLRAPAYYPIPRPNGSERAISRALDALRWRDRFRRLTAILGQGLRRQAQGIAATLQVALPRGDSAKDAMNVSQARMPPIDEPVSSSAVKRSKTEPLRHRI
SIO_010081: METD_RS28495
subclass of: SO_0000673
so part of: METD_RS28495
location: 21119..24472
location: region:21119-24472:1
so has part: feature:21119-24472:1:exon

WP_012779291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21119-24472:1:exon

METD_RS30850
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS30850
so part of: sequence
location: 24622..24933
location: region:24622-24933:1
so has part: feature:24622-24933:1:exon
subclass of: SO_0000010

72993052
type: Gene
SIO_000068: ncbigene

position:24622:1
position: 24622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24933:1
position: 24933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24622-24933:1:exon

METD_RS30850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS30850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLIGVDVYSFSMEDGFNNIKRDYVEDLDTKIKHFIYKSSIYISLDKIKIAYDTGKAYYTLEKGVHVDQIQISKIIFSDGSSVLTPSNELDRIILLSNRDVI
SIO_010081: METD_RS30850
subclass of: SO_0000673
so part of: METD_RS30850
location: 24622..24933
location: region:24622-24933:1
so has part: feature:24622-24933:1:exon

WP_158021010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24622-24933:1:exon

METD_RS28145
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28145
old locus tag: METD_P2METDI0025
old locus tag: p2METDI0025
so part of: sequence
location: 25251..26303
location: region:25251-26303:1
so has part: feature:25251-26303:1:exon
subclass of: SO_0000010

72992740
type: Gene
SIO_000068: ncbigene

position:25251:1
position: 25251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26303:1
position: 26303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25251-26303:1:exon

METD_RS28145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28145
old locus tag: METD_P2METDI0025
old locus tag: p2METDI0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015951883.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease/exonuclease/phosphatase family protein
translation: MDLSYLPIVLKAFAVMLIAASLLPLVPTNLGFIRTLDFPRFQFAIALLACIVGLLSLERDAGVLILALVMVGALVLQASHILPFTPIWATQAKAARTCDPGERMSLLVLNVLQSNRDYGAALNLVASRSPDLVLLLETDESWREAMAPMRDRYPERVEQPQDNTYGLLFYSRFPLRDATVRHLLQEDVPSLRTAIVLPDGEHVTFHGLHPRPPHPGHSSAPRDAELVMVAREVAETRGPTIVAGDLNDVAWSRTNALFQNISGLLDPRQGRGLFSTFHARYPFARWPLDHVFYSEHFLLSGMERLGDVGSDHFPIWVELCRAPHASAKQETPEASTEDHRDAREAIEAVR
SIO_010081: METD_RS28145
subclass of: SO_0000673
so part of: METD_RS28145
location: 25251..26303
location: region:25251-26303:1
so has part: feature:25251-26303:1:exon

WP_244414148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25251-26303:1:exon

METD_RS28150
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28150
old locus tag: METD_P2METDI0027
old locus tag: p2METDI0027
so part of: sequence
location: complement(26456..27751)
location: region:26456-27751:-1
so has part: feature:26456-27751:-1:exon
subclass of: SO_0000010

72992741
type: Gene
SIO_000068: ncbigene

position:26456:-1
position: 26456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27751:-1
position: 27751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26456-27751:-1:exon

METD_RS28150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28150
old locus tag: METD_P2METDI0027
old locus tag: p2METDI0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012779294.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015105 - arsenite transmembrane transporter activity [Evidence IEA]
GO process: GO:0046685 - response to arsenic-containing substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenic transporter
translation: MLALAIFLVTLVLVIWQPKGLGIGWSALAGAAVALATGVIHPGDIPVVWHIVWDATFTFVALIIISLLLDEAGFFHWAALHIARWGGGRGRLLFPLVILLGAAIAAVFANDGAALLLTPIVLAILLRLKFPPAAALAFIVACGFVADSTSLPLVISNLVNIVSANYFDVTFGRYAAVMVPVNLVSLLATLVVLWAYFRHDVPATYPVGELEPPRDAIRDPVVFKAAFPLLGVLLLAYFITAPFGVPVSVVTCAGAAVLLGLALRGRVIPIRKVLTGAPWQIVLFSLGMYLVVYGLRNAGLTDELAKGLVWLGGQGPWVATVGTGFAAAILSSVMNNMPSVLIGALSIQQAPDLTPLTRELMVYANVIGCDLGPKFTPIGSLATLLWLHVLASKGQRITWGQYMKVGLVITPPVLLVSLLALAAWLPVLGTQ
SIO_010081: METD_RS28150
subclass of: SO_0000673
so part of: METD_RS28150
location: complement(26456..27751)
location: region:26456-27751:-1
so has part: feature:26456-27751:-1:exon

WP_012779294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26456-27751:-1:exon

METD_RS28155
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
gene: arsC
locus tag: METD_RS28155
old locus tag: METD_P2METDI0028
old locus tag: p2METDI0028
so part of: sequence
location: complement(27786..28211)
location: region:27786-28211:-1
so has part: feature:27786-28211:-1:exon
subclass of: SO_0000010

72992742
type: Gene
SIO_000068: ncbigene

position:27786:-1
position: 27786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28211:-1
position: 28211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27786-28211:-1:exon

METD_RS28155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
gene: arsC
locus tag: METD_RS28155
old locus tag: METD_P2METDI0028
old locus tag: p2METDI0028
EC number: 1.20.4.1
function: 15.5 : Detoxification
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012455866.1
GO function: GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
note: This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase (glutaredoxin)
translation: MDVVIYHNPACGTSRNTLAMIRNAGIEPHVIEYLKTPPTRALLVQLLARAGLAVRDVLREKGTPYAELGLGDPALTDDQLLDAIEAHPILLNRPLVVTPKGVALCRPSEAVLDLLPAQQGEFVKEDGERVVDEHGRRVATA
SIO_010081: METD_RS28155
subclass of: SO_0000673
so part of: METD_RS28155
location: complement(27786..28211)
location: region:27786-28211:-1
so has part: feature:27786-28211:-1:exon

WP_012779295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27786-28211:-1:exon

METD_RS28160
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28160
old locus tag: METD_P2METDI0029
old locus tag: p2METDI0029
so part of: sequence
location: complement(28211..28738)
location: region:28211-28738:-1
so has part: feature:28211-28738:-1:exon
subclass of: SO_0000010

72992743
type: Gene
SIO_000068: ncbigene

position:28738:-1
position: 28738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28211-28738:-1:exon

METD_RS28160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28160
old locus tag: METD_P2METDI0029
old locus tag: p2METDI0029
EC number: 1.20.4.4
function: 15.5 : Detoxification
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010682456.1
GO function: GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase ArsC
translation: MPDRVYNVLFLCTGNSARSILAEAMLNKDGQGRFRAFSAGSQPKGQPHPLALQTLQETDYPTDGLRSKSWDEFAAPGAPQLDFVFTVCDNAAGEACPLWPGQPVTAHWGIEDPAAAEGSEIERKRAFVTAQRYLKNRIAAFVALPLGSLDQVALSSKVREIGQQAGATSPRPEVA
SIO_010081: METD_RS28160
subclass of: SO_0000673
so part of: METD_RS28160
location: complement(28211..28738)
location: region:28211-28738:-1
so has part: feature:28211-28738:-1:exon

WP_012779296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28211-28738:-1:exon

METD_RS28165
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28165
old locus tag: METD_P2METDI0030
old locus tag: p2METDI0030
so part of: sequence
location: complement(28731..29090)
location: region:28731-29090:-1
so has part: feature:28731-29090:-1:exon
subclass of: SO_0000010

72992744
type: Gene
SIO_000068: ncbigene

position:28731:-1
position: 28731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29090:-1
position: 29090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28731-29090:-1:exon

METD_RS28165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28165
old locus tag: METD_P2METDI0030
old locus tag: p2METDI0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012255058.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDSPQAVAAFAALGQEYRLSIVRALVTAGPDGLAAGVLAGEVGVSSTNLSFHVKELSRAGLIQSRRDGRSIIYSATYPALSDLIAFLMRDCCQGRPEVCTPAVEALVACCTPTGDVAHA
SIO_010081: METD_RS28165
subclass of: SO_0000673
so part of: METD_RS28165
location: complement(28731..29090)
location: region:28731-29090:-1
so has part: feature:28731-29090:-1:exon

WP_173390193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28731-29090:-1:exon

METD_RS28170
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
gene: arsH
locus tag: METD_RS28170
old locus tag: METD_P2METDI0031
old locus tag: p2METDI0031
so part of: sequence
location: 29141..29887
location: region:29141-29887:1
so has part: feature:29141-29887:1:exon
subclass of: SO_0000010

72992745
type: Gene
SIO_000068: ncbigene

position:29141:1
position: 29141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29887:1
position: 29887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29141-29887:1:exon

METD_RS28170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
gene: arsH
locus tag: METD_RS28170
old locus tag: METD_P2METDI0031
old locus tag: p2METDI0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012253453.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenical resistance protein ArsH
translation: MDKPQQPFNDGMPNLSETHFEVPTAERLHPAQPFTHAPRFLILYGSLRERSFSRFLAYEAARLLEAMGGEVRIYDAHGLPLPDDTTADHPKVQELRQLSIWSEGQVWVSPERHGNLTGVMKSQIDWLPLSEGSVRPTQGRTLAVMQVSGGSQSFNAVNALRVLGRWMRMIAIPNQSSVPMAYKEFDDAGRMKPGPLYERVVDVCEELMKFTLLTRERADYLVDRYSERREREPDRLKAVAADIGFVKR
SIO_010081: METD_RS28170
subclass of: SO_0000673
so part of: METD_RS28170
location: 29141..29887
location: region:29141-29887:1
so has part: feature:29141-29887:1:exon

WP_012779298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29141-29887:1:exon

METD_RS31220
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS31220
old locus tag: METD_P2METDI0033
so part of: sequence
location: complement(30737..30952)
location: region:30737-30952:-1
so has part: feature:30737-30952:-1:exon
subclass of: SO_0000010

72993123
type: Gene
SIO_000068: ncbigene

position:30737:-1
position: 30737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30952:-1
position: 30952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30737-30952:-1:exon

METD_RS31220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS31220
old locus tag: METD_P2METDI0033
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTEDDDAPSEGLIPENFAYRVEGAQFARIQSDAWKEIYKPVSHYLFVTGWGCMDVLSGGVPVFLLVDRPG
SIO_010081: METD_RS31220
subclass of: SO_0000673
so part of: METD_RS31220
location: complement(30737..30952)
location: region:30737-30952:-1
so has part: feature:30737-30952:-1:exon

WP_197536995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30737-30952:-1:exon

METD_RS28175
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28175
old locus tag: METD_P2METDI0034
pseudo: true
so part of: sequence
location: complement(31107..>31955)
location: region:31107-31955:-1
so has part: feature:31107-31955:-1:exon
subclass of: SO_0000010

72992746
type: Gene
SIO_000068: ncbigene

position:31107:-1
position: 31107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31955:-1
position: 31955
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31107-31955:-1:exon

METD_RS28175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28175
old locus tag: METD_P2METDI0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611370.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element ISMex5 family transposase
SIO_010081: METD_RS28175
subclass of: SO_0000673
so part of: METD_RS28175
location: complement(31107..>31955)
location: region:31107-31955:-1
so has part: feature:31107-31955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31107-31955:-1:exon

METD_RS28180
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28180
old locus tag: METD_P2METDI0035
old locus tag: p2METDI0035
so part of: sequence
location: complement(31958..33079)
location: region:31958-33079:-1
so has part: feature:31958-33079:-1:exon
subclass of: SO_0000010

72992747
type: Gene
SIO_000068: ncbigene

position:31958:-1
position: 31958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33079:-1
position: 33079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31958-33079:-1:exon

METD_RS28180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28180
old locus tag: METD_P2METDI0035
old locus tag: p2METDI0035
function: 17.3 : Transposon functions
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612217.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630-like element ISMex18 family transposase
translation: MAAFYEEVATMARGPKPAHLDLTGDERTRLQGLVRRRNVGQALAQRARIVLACAEPGSTNSGIARALGVSRMSVTTWRARFLAHRLDGLVDLPRSGAPRQVADTEIEQMITRTLESQPENATHWSTRAMARRVGMSQTMVSRIWRAFGLQPHKIEAFKLSTDPAFVDKVRDVVGLYMAPPHRAVVLCVDEKPQIQALTGTAPVMPMRPGQPERQTHDYRRAGTTDLFAALDVQAGRVIGHCARRHRSIEFRAFLDQVEADVPKDLDVHLVLDNAATHKTKLIHDWLLKRPRWHLHFTPTSASWLNLVEGWFALLTRRQLQRGVFETTGDLEAAIHAYIDQTNAEPKPFVWTKSADAILASIKRFCQRTSNSDH
SIO_010081: METD_RS28180
subclass of: SO_0000673
so part of: METD_RS28180
location: complement(31958..33079)
location: region:31958-33079:-1
so has part: feature:31958-33079:-1:exon

WP_012779301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31958-33079:-1:exon

METD_RS28185
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28185
old locus tag: METD_P2METDI0036
pseudo: true
so part of: sequence
location: complement(<33140..33453)
location: region:33140-33453:-1
so has part: feature:33140-33453:-1:exon
subclass of: SO_0000010

72992748
type: Gene
SIO_000068: ncbigene

position:33140:-1
position: 33140
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:33453:-1
position: 33453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33140-33453:-1:exon

METD_RS28185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28185
old locus tag: METD_P2METDI0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611756.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: METD_RS28185
subclass of: SO_0000673
so part of: METD_RS28185
location: complement(<33140..33453)
location: region:33140-33453:-1
so has part: feature:33140-33453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33140-33453:-1:exon

METD_RS28190
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28190
old locus tag: METD_P2METDI0037
so part of: sequence
location: 33505..33675
location: region:33505-33675:1
so has part: feature:33505-33675:1:exon
subclass of: SO_0000010

72992749
type: Gene
SIO_000068: ncbigene

position:33505:1
position: 33505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33675:1
position: 33675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33505-33675:1:exon

METD_RS28190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28190
old locus tag: METD_P2METDI0037
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGADHIASGNVKPGPDDMPEGARFIGKPFSAELVHRHIKEILPDGQKPDPLKNLDC
SIO_010081: METD_RS28190
subclass of: SO_0000673
so part of: METD_RS28190
location: 33505..33675
location: region:33505-33675:1
so has part: feature:33505-33675:1:exon

WP_197536996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33505-33675:1:exon

METD_RS28195
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28195
old locus tag: METD_P2METDI0038
old locus tag: p2METDI0038
so part of: sequence
location: 33932..34234
location: region:33932-34234:1
so has part: feature:33932-34234:1:exon
subclass of: SO_0000010

72992750
type: Gene
SIO_000068: ncbigene

position:33932:1
position: 33932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34234:1
position: 34234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33932-34234:1:exon

METD_RS28195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28195
old locus tag: METD_P2METDI0038
old locus tag: p2METDI0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020095942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASIEELANTLRGVAASGMKPKALLAAVREQHPEATKKEVVRAAFYALTESHGDASEHLRDLHGFAITERAPDDDEPVKATKLRKKKKDRKAGAAEQPAH
SIO_010081: METD_RS28195
subclass of: SO_0000673
so part of: METD_RS28195
location: 33932..34234
location: region:33932-34234:1
so has part: feature:33932-34234:1:exon

WP_041359206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33932-34234:1:exon

METD_RS28200
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28200
old locus tag: METD_P2METDI0039
old locus tag: p2METDI0039
so part of: sequence
location: complement(34251..34505)
location: region:34251-34505:-1
so has part: feature:34251-34505:-1:exon
subclass of: SO_0000010

72992751
type: Gene
SIO_000068: ncbigene

position:34251:-1
position: 34251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34505:-1
position: 34505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34251-34505:-1:exon

METD_RS28200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28200
old locus tag: METD_P2METDI0039
old locus tag: p2METDI0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015822506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPVSRCLHKVDHLSAVPDSTVAERINAALDELEGAYRKPCERIVALEMVLHEVRQNRRIGGTPFARFVHVSVERRQEKLSRCA
SIO_010081: METD_RS28200
subclass of: SO_0000673
so part of: METD_RS28200
location: complement(34251..34505)
location: region:34251-34505:-1
so has part: feature:34251-34505:-1:exon

WP_041359208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34251-34505:-1:exon

METD_RS28205
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
gene: fabI
locus tag: METD_RS28205
old locus tag: METD_P2METDI0040
old locus tag: p2METDI0040
so part of: sequence
location: 34960..35724
location: region:34960-35724:1
so has part: feature:34960-35724:1:exon
subclass of: SO_0000010

72992752
type: Gene
SIO_000068: ncbigene

position:34960:1
position: 34960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35724:1
position: 35724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34960-35724:1:exon

METD_RS28205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
gene: fabI
locus tag: METD_RS28205
old locus tag: METD_P2METDI0040
old locus tag: p2METDI0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014290156.1
GO function: GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-ACP reductase FabI
translation: MFSLKGSRALVVGVANDQSIAWGCAKALRQQGADLAITYLNEKAEAYVRPLAEQLDAQIVMPLDVSQPRQMDALFEEITARWGRLDTLLHSIAFCPRDDLHGRVVDCSAEGFAQAMDVSVHSFLRMLQRAEPLMERGGTCMTVSFYGSEKVVEHYNIMGPVKAALEAVVRYTAAELGPKGISVHALSPGPLKTRAASGIAEFDKLLNNAAEQAPTHMLATIDDVGAYAAFLASREAANVTGGIHLIDGGYSIVG
SIO_010081: METD_RS28205
subclass of: SO_0000673
so part of: METD_RS28205
location: 34960..35724
location: region:34960-35724:1
so has part: feature:34960-35724:1:exon

WP_041359224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34960-35724:1:exon

METD_RS28210
type: Gene
subclass of: SO_0000704
RO_0002162: 661410
locus tag: METD_RS28210
old locus tag: METD_P2METDI0041
old locus tag: p2METDI0041
so part of: sequence
location: 35739..38207
location: region:35739-38207:1
so has part: feature:35739-38207:1:exon
subclass of: SO_0000010

72992753
type: Gene
SIO_000068: ncbigene

position:35739:1
position: 35739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38207:1
position: 38207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35739-38207:1:exon

METD_RS28210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 661410
locus tag: METD_RS28210
old locus tag: METD_P2METDI0041
old locus tag: p2METDI0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019964770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3141 domain-containing protein
translation: MDELQPTALASSLAGARRDVFLQGPVVRREEMMEYFAQGAAASELLLRAASRQWSAISNAQNKRSLKNLERLNIGFEGMVNSAMTGSLSQDWAAYLHDRAERTVLTLDALRERGDIFIAHEGAGCPPVLIYDYEVVMDGRDLPRPCNYMLLRIVPPAGVTVADSKRPYVIIDPRAGHGAGIGGFKFDSQVGVALARGNPVYFVGFRRDPESGQTLADVARAEAAFVREVVRRHPESPMPAIIGNCQGGWAALLLAATNPDLSGPVVLNGAPVAAWSGEVGTNPMRYKAGLIGGTWQSMFWSDIGGGVFDGAHLVNNFELLNPSRHYFVKYYDLFTSIDIGRERFLEFEKWWGGMFLMNEPEICWIVEQLFVGNKLVKNTAQLEPGRPIDLKGIRAPIIVFSSFGDNITPPQQALNWLVDTYADVDEMRIHGQRIIYMLNDEIGHLGIFVSAKIAKKEHTEVSSVMRTIESLPPGLYEMKIEAAQGDGIDRQFTVAFYERTLDDVRRIDDGRVDERPFAAVDRFSTAQAEAYDVLVRPLVKAMVTAPMAEASRALHPLRLQRRMMSTQNPLAAPLRMMADVVKPSRRELPVGNPFASAEAMMADMFAQSLDLFRDMRDMAYEQMFFSLWHSPWAQNYGKPHDLHRTLESAAELRALPEVAIALGHLRAGGFVEAVVRMLVLLAQSAGSVRRDRLERSAQMLVDNEPFRSLTTAERARIIHEQTLIVRFAPTEAIETLLDLLPSHAERELALRLVHYIPGRLSEMAPTTLSLLQRLHAVLEVPPINEDVLDNPLDGRDEPPDQLAGWARADNRQTASQTGAAAE
SIO_010081: METD_RS28210
subclass of: SO_0000673
so part of: METD_RS28210
location: 35739..38207
location: region:35739-38207:1
so has part: feature:35739-38207:1:exon

WP_111772160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35739-38207:1:exon