Fusarium oxysporum Fo47 chromosome V, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.
Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent
Mol. Plant Microbe Interact. (2020) In press
Publication Status: Available-Online prior to print
Submitted (30-MAR-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (26-MAY-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
Submitted (21-APR-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP052042.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: NextDenovo v. v2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 341.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
potassium/sodium efflux P-type ATPase, fungal-type
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX
3-oxoacyl-[acyl-carrier protein] reductase
3-carboxy-cis,cis-muconate cycloisomerase
phosphoribosylaminoimidazole carboxylase ADE2
MFS transporter, SP family, general alpha glucoside:H+ symporter
CNT family concentrative nucleoside transporter
mitochondrial 37S ribosomal protein YmS-T
piT family inorganic phosphate transporter
vesicle-associated membrane protein-associated protein B
mitochondrial 54S ribosomal protein YmL20
isocitrate dehydrogenase [NADP], mitochondrial
ubiquinol-cytochrome c reductase subunit 8
H/ACA ribonucleoprotein complex subunit 2
Nem1-Spo7 phosphatase catalytic subunit NEM1
translation initiation factor eIF-2B subunit beta
ubiquinol-cytochrome c reductase subunit 7
U3 small nucleolar ribonucleoprotein IMP3
glycosylphosphatidylinositol anchor biosynthesis protein 11
ubiquitin-like modifier-activating enzyme atg-7
NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial
eukaryotic translation initiation factor 3 subunit I
NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial
S-(hydroxymethyl)glutathione dehydrogenase
DNA repair and recombination protein RAD52
endoplasmic reticulum vesicle protein 25
ketol-acid reductoisomerase, mitochondrial
mannan polymerase II complex ANP1 subunit
RNA polymerase II transcription factor B subunit 5
imidazole glycerol phosphate synthase hisHF
guanine nucleotide-binding protein alpha-2 subunit
osomolarity two-component system, sensor histidine kinase SLN1
RNA polymerase III-inhibiting protein MAF1
eukaryotic translation initiation factor 3 subunit F
rRNA-binding ribosome biosynthesis protein UTP25
translation initiation factor 2 subunit 2
[acyl-carrier-protein] S-malonyltransferase
mitochondrial outer membrane protein porin
snoRNA-binding rRNA-processing protein IMP4
mitochondrial import receptor subunit tom-70
glycerophosphoryl diester phosphodiesterase
ubiquinone biosynthesis monooxygenase Coq7
cAMP-dependent protein kinase regulatory subunit
cleavage polyadenylation factor subunit MPE1
serine hydroxymethyltransferase, mitochondrial
ribosomal RNA large subunit methyltransferase J
DNA-directed RNA polymerase III subunit RPC1
histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5
fructose-bisphosphate aldolase, class II
mitochondrial 37S ribosomal protein YmS18
mitochondrial intermembrane space import and assembly protein 40
NADH dehydrogenase (ubiquinone) Fe-S protein 4
eukaryotic translation initiation factor 3 subunit L
histone-lysine N-methyltransferase, H3 lysine-79 specific
maintenance-mitochondrial morphology protein 1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
acireductone dioxygenase (Ni2+-requiring)
histone H3-like centromeric protein cse-4
glucose repression regulatory protein TUP1
bifunctional aminoimidazole ribotide synthase/glycinamide ribotide synthase
mRNA-binding ribosome biosynthesis protein NOP4
dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
eukaryotic translation initiation factor 3 subunit C
30S ribosomal protein S10, mitochondrial
DNA-directed RNA polymerase II subunit RPB2
phosphate-repressible phosphate permease