Fusarium oxysporum Fo47 chromosome IV, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.
Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent
Mol. Plant Microbe Interact. (2020) In press
Publication Status: Available-Online prior to print
Submitted (30-MAR-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (26-MAY-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
Submitted (21-APR-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP052041.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: NextDenovo v. v2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 341.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
cytochrome c oxidase-assembly factor COX23, mitochondrial
translation initiation factor 3 subunit B
omega-6 fatty acid desaturase (delta-12 desaturase)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
branched-chain amino acid aminotransferase
glycerol-3-phosphate dehydrogenase [NAD+]
presequence translocated-associated motor subunit PAM17, mitochondrial
1-aminocyclopropane-1-carboxylate deaminase
translation initiation factor 3 subunit G
phosphatidylethanolamine N-methyltransferase
riboflavin biosynthesis protein RibD domain-containing protein
signal recognition particle subunit SRP68
25S rRNA (adenine645-N1)-methyltransferase
dolichyl-phosphate beta-glucosyltransferase
translation initiation factor 2 subunit 1
mitochondrial inner membrane protease subunit 2
snoRNA-binding rRNA-processing protein ENP1
DNA replication complex GINS protein PSF2
cytochrome b-c1 complex subunit Rieske, mitochondrial
xeroderma pigmentosum group C-complementing protein
mitotic spindle assembly checkpoint protein MAD2
NCS1 family nucleobase:cation symporter-1
dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase
STIP1 likey and U-box containing protein 1
bifunctional 4-alpha-glucanotransferase/amylo-alpha-1,6-glucosidase
ADP-ribosylation factor GTPase-activating protein
mitochondrial import inner membrane translocase subunit TIM21
actin cytoskeleton-regulatory complex protein END3
DNA-directed RNA polymerase I, II, and III subunit RPABC1
DNA-directed RNA polymerase I subunit RPA12
serine/threonine-protein phosphatase PP2A catalytic subunit
cytochrome c oxidase assembly protein COX16, mitochondrial
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
mitochondrial import inner membrane translocase subunit tim-17
chromosome transmission fidelity protein 18
mitochondrial 37S ribosomal protein NAM9
peanut-like protein 1 (cell division control like protein 1)
transcription initiation factor TFIIA small subunit
V-type H+-transporting ATPase 21kDa proteolipid subunit
major histocompatibility complex, class I
large conductance mechanosensitive channel
peroxisomal hydratase-dehydrogenase-epimerase
guanine nucleotide-binding protein subunit alpha, other
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase
isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
methylenetetrahydrofolate reductase (NADPH)
electron transfer flavoprotein beta subunit
carbamoyl-phosphate synthase arginine-specific small chain, mitochondrial
nicotinate-nucleotide diphosphorylase (carboxylating)
NADH-ubiquinone oxidoreductase 20.8 kDa subunit
mitochondrial 54S ribosomal protein YmL16
ATP-binding cassette, subfamily F, member 3
DNA replication ATP-dependent helicase Dna2
peptide-methionine (R)-S-oxide reductase
nicotinate (nicotinamide) nucleotide adenylyltransferase
phosphoribosylaminoimidazole-succinocarboxamide synthase
phosphoribosylformylglycinamidine synthase
altered inheritance-mitochondria protein 31, mitochondrial
glycylpeptide N-tetradecanoyltransferase
transcription initiation factor TFIID subunit 2
negative cofactor 2 complex subunit beta
serine/threonine-protein phosphatase 2A activator 1
CCR4-NOT transcription complex subunit 4
NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
ubiquinone biosynthesis methyltransferase
2-oxoisovalerate dehydrogenase E1 component, alpha subunit
NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
cell division cycle 20-like protein 1, cofactor-APC complex
3-methyl-2-oxobutanoate hydroxymethyltransferase
protein serine/threonine kinase activating protein DBF4
NADH dehydrogenase (ubiquinone) Fe-S protein 7
transcription initiation factor TFIID subunit 1
MADS-box transcription factor, other eukaryote
mitochondrial import inner membrane translocase subunit TIM50
3-hydroxy-3-methylglutaryl-coenzyme A reductase
non-specific serine/threonine protein kinase
CDK-activating kinase assembly factor MAT1
cyclin-dependent kinase regulatory subunit CKS1
potassium/sodium efflux P-type ATPase, fungal-type
3-oxoacyl-[acyl-carrier protein] reductase