Fusarium oxysporum Fo47 chromosome III, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.
Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent
Mol. Plant Microbe Interact. (2020) In press
Publication Status: Available-Online prior to print
Submitted (30-MAR-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (26-MAY-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
Submitted (21-APR-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP052040.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: NextDenovo v. v2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 341.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
DNA-directed RNA polymerase II subunit RPB9
peptidyl-prolyl cis-trans isomerase ssp-1
OPT family small oligopeptide transporter
nuclear distribution protein nudE like 1
F-box and WD-40 domain-containing protein MET30
RP/EB family microtubule-associated protein
3',5'-cyclic-nucleotide phosphodiesterase
1-acyl-sn-glycerol-3-phosphate acyltransferase
patatin-like phospholipase domain-containing protein
DNA-directed RNA polymerase I, II, and III subunit RPABC2
protein-S-isoprenylcysteine O-methyltransferase
mitochondrial 54S ribosomal protein MRPL51
U1 small nuclear ribonucleoprotein 70kDa
pH-response transcription factor pacC/RIM101
mitochondrial import inner membrane translocase subunit TIM14
dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit
pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
serine/threonine-protein phosphatase PP1
guanine nucleotide-binding protein subunit gamma
translation initiation factor 3 subunit A
histone acetyltransferase type B catalytic subunit
snoRNA-binding rRNA-processing protein UTP10
bifunctional hydroxyethylthiazole kinase/thiamine-phosphate diphosphorylase
5-aminolevulinate synthase, mitochondrial
peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
nucleoside transmembrane transporter FUN26
mitochondrial distribution and morphology protein 34
structural maintenance-chromosome 3 (chondroitin sulfate proteoglycan 6)
transcription factor TFIIIB subunit BDP1
ATP-binding cassette, subfamily B (MDR/TAP), member 1
rRNA (cytosine-C5-)-methyltransferase RCM1
minichromosome maintenance protein 5 (cell division control protein 46)
histone acetyltransferase type B subunit 2
replication fork protection complex subunit Tof1/Swi1
S-adenosylmethionine-dependent methyltransferase
DNA-directed RNA polymerase II subunit RPB11
eukaryotic translation initiation factor 2 subunit gamma
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein
mitochondrial 54S ribosomal protein YmL25
pre-mRNA-splicing ATP-dependent RNA helicase PRP28
mannan polymerase complexes MNN9 subunit
F-type H+-transporting ATPase subunit gamma
mannan polymerase II complex MNN10 subunit
NADH-ubiquinone oxidoreductase 14.8 kDa subunit
DNA-directed RNA polymerase I and III subunit RPAC2
mitochondrial inner membrane protease ATP23
60S ribosome subunit biogenesis protein nip7
snoRNA-binding rRNA-processing protein NOP14
NAD(P)H-dependent D-xylose reductase xyl1
V-type proton ATPase catalytic subunit A
actin like protein 2/3 complex, subunit 2
snoRNA-binding rRNA-processing protein DIP2
transcriptional regulatory protein Pro-1
small nuclear ribonucleoprotein B and B'
rDNA-binding RNA polymerase I transcriptional factor
oligosaccharyl transferase complex subunit OST4
chromodomain-helicase-DNA-binding protein 1
minichromosome maintenance protein 7 (cell division control protein 47)
geranylgeranyl transferase type-2 subunit beta
methylenetetrahydrofolate reductase (NADPH)
vacuolar protein sorting-associated protein 1
malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
centromere/microtubule-binding protein cbf5
POT family proton-dependent oligopeptide transporter
mitochondrial import receptor subunit tom-40
mitochondrial 54S ribosomal protein YmL7/YmL5
cytochrome c oxidase subunit 6, mitochondrial
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
succinate dehydrogenase (ubiquinone) flavoprotein subunit
mitochondrial 37S ribosomal protein MRPS9
tRNA(Thr) (cytosine(32)-N(3))-methyltransferase
histone-lysine N-methyltransferase, H3 lysine-4 specific
glycerophosphoryl diester phosphodiesterase
NCS2 family nucleobase:cation symporter-2
protoheme IX farnesyltransferase, mitochondrial
MFS transporter, SP family, sugar:H+ symporter
MFS transporter, FHS family, L-fucose permease
aminocarboxymuconate-semialdehyde decarboxylase
omega-6 fatty acid desaturase (delta-12 desaturase)