Fusarium oxysporum Fo47 chromosome II, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.
Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent
Mol. Plant Microbe Interact. (2020) In press
Publication Status: Available-Online prior to print
Submitted (30-MAR-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (26-MAY-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
Submitted (21-APR-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP052039.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: NextDenovo v. v2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 341.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
methylmalonate-semialdehyde dehydrogenase (acylating)
F-box and leucine-rich repeat protein GRR1
ATP-dependent Clp protease, protease subunit
dihydroxy-acid dehydratase, mitochondrial
glucose-repressible alcohol dehydrogenase transcriptional effector
succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial
ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
ABC transporter ATP-binding protein ARB1
mitochondrial 54S ribosomal protein YmL36
transcription initiation factor TFIID subunit 5
MFS transporter, AGZA family, xanthine/uracil permease
ubiquitin carboxyl-terminal hydrolase L5
mannosyl-oligosaccharide alpha-1,2-mannosidase
Arf family guanine nucleotide exchange factor SYT1
signal recognition particle subunit SRP72
transcription initiation factor TFIIE subunit alpha
cell division cycle 20-like protein 1, cofactor-APC complex
NADH dehydrogenase (ubiquinone) Fe-S protein 5
electron transfer flavoprotein alpha subunit
GPI ethanolamine phosphate transferase 1
acetyl-CoA:L-glutamate N-acetyltransferase
eukaryotic translation initiation factor 5A
mitochondrial 54S ribosomal protein YmL3
MFS transporter, metabolite:H+ symporter
protein-L-isoaspartate O-methyltransferase
NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1
chromosome transmission fidelity protein 1
piT family inorganic phosphate transporter
MFS transporter, SIT family, siderophore-iron:H+ symporter
F-box and WD-40 domain-containing protein CDC4
omega-6 fatty acid desaturase (delta-12 desaturase)
coatomer protein complex, subunit alpha (xenin)
glycosylphosphatidylinositol transamidase
NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
ubiquitin carboxyl-terminal hydrolase 22/27/51
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex 9
ribosomal RNA small subunit methyltransferase NEP1
mitochondrial 37S ribosomal protein MRPS17
DNA repair and recombination protein RAD54 and RAD54-like protein
signal recognition particle subunit SRP14
ribosomal-protein-alanine N-acetyltransferase
phospholipid:diacylglycerol acyltransferase
H/ACA ribonucleoprotein complex subunit 1
translation initiation factor eIF-2B subunit epsilon
altered inheritance-mitochondria protein 24, mitochondrial
SKI complex subunit tetratricopeptide repeat protein SKI3
eukaryotic translation initiation factor 3 subunit K
tubulin-binding prefolding complex subunit PAC10
serine hydroxymethyltransferase, cytosolic
acetolactate synthase small subunit, mitochondrial
ornithine carbamoyltransferase, mitochondrial
type 1 protein phosphatase-activating protein YPI1
other hect domain ubiquitin protein ligase E3
glyceraldehyde 3-phosphate dehydrogenase
rRNA (cytosine-C5-)-methyltransferase NOP2
mitochondrial 37S ribosomal protein RSM27
transcription initiation factor TFIID subunit 13
ribonucleoside-diphosphate reductase large chain
CDP-diacylglycerol-inositol 3-phosphatidyltransferase
signal recognition particle subunit SRP19
serine/threonine-protein phosphatase 2B catalytic subunit
translation initiation factor eIF-2B subunit delta
arginine biosynthesis ArgJ, mitochondrial
transformation/transcription domain-associated protein
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
eukaryotic translation initiation factor 3 subunit E
snoRNA-binding rRNA-processing protein UTP6
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
prenylcysteine oxidase/farnesylcysteine lyase
alpha,alpha-trehalose-phosphate synthase
transcription initiation factor TFIID subunit 12
mitochondrial 54S ribosomal protein YmL33
ATP-binding cassette, subfamily D (ALD), member 2
transcription initiation factor TFIIH subunit 2
tRNA (adenine57-N1/adenine58-N1)-methyltransferase
protein phosphatase 2A regulatory subunit RTS1
transcription factor TFIIIC subunit TFC1
phosphatidylinositol phospholipase C, gamma-1
protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
3-oxoacyl-[acyl-carrier protein] reductase
MFS transporter, SP family, general alpha glucoside:H+ symporter