Fusarium oxysporum Fo47 chromosome I, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.
Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent
Mol. Plant Microbe Interact. (2020) In press
Publication Status: Available-Online prior to print
Submitted (30-MAR-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (26-MAY-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
Submitted (21-APR-2020) Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, Xi'an, Shaanxi 7120000, China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP052038.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: NextDenovo v. v2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 341.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
branched-chain amino acid aminotransferase
3-oxoacyl-[acyl-carrier protein] reductase
succinate-semialdehyde dehydrogenase (NADP+)
mitochondrial 37S ribosomal protein MRP2
U2-type spliceosomal complex subunit CWC25
oligosaccharyl transferase complex subunit OST4
1-phosphatidylinositol-3-phosphate 5-kinase
mRNA-binding ribosome synthesis protein NOC2
peptide-methionine (S)-S-oxide reductase
malate dehydrogenase (oxaloacetate-decarboxylating)
DNA-directed RNA polymerase III subunit RPC6
peptidyl-prolyl cis-trans isomerase, mitochondrial
ubiquitin domain-containing protein DSK2
nitrogen permease regulating protein NPR2
succinate dehydrogenase (ubiquinone) membrane anchor subunit
mannosyl-oligosaccharide alpha-1,2-mannosidase
mitochondrial import inner membrane translocase subunit TIM10
cell division cycle 20, cofactor-APC complex
DNA-directed RNA polymerase III subunit RPC3
ubiquinol-cytochrome c reductase core subunit 2
chromosome transmission fidelity protein 8
phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit
peptidyl-prolyl cis-trans isomerase-like 3
RNA polymerase II subunit A domain phosphatase SSU72
DNA-directed RNA polymerase II subunit RPB1
DNA-directed RNA polymerase I, II, and III subunit RPABC5
RNA-binding ribosome biosynthesis protein MRD1
CORVET complex membrane-binding subunit VPS8
UDP-N-acetylglucosamine pyrophosphorylase
histidine biosynthesis trifunctional protein
transcription initiation factor TFIID subunit 9B
mitochondrial-processing peptidase subunit beta
inosine-5'-monophosphate dehydrogenase IMD4
DNA-directed RNA polymerase III subunit RPC2
actin like protein 2/3 complex, subunit 5
transcription elongation factor B, polypeptide 1
F-type H+-transporting ATPase subunit epsilon
tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
mitochondrial 54S ribosomal protein YmL47
saccharopine dehydrogenase [NADP+, L-glutamate-forming]
peroxiredoxin (alkyl hydroperoxide reductase subunit C)
S-adenosylmethionine-dependent methyltransferase
U6 snRNA-associated Sm-like protein LSm2
DNA-directed RNA polymerase I and III subunit RPAC1
ubiquinone biosynthesis monooxygenase Coq6
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial
structure-specific recognition protein 1
glutamate-1-semialdehyde 2,1-aminomutase
MFS transporter, NNP family, nitrate/nitrite transporter
methylenetetrahydrofolate dehydrogenase (NAD+)
1-phosphatidylinositol phosphodiesterase
dolichyl-diphosphooligosaccharide-protein glycosyltransferase
rRNA-binding ribosome biosynthesis protein UTP23
U6 snRNA-associated Sm-like protein LSm6
cytosolic Fe-S cluster assembly factor NAR1
phospho-2-dehydro-3-deoxyheptonate aldolase, phenylalanine-inhibited
DNA replication complex GINS protein SLD5
methylmalonate-semialdehyde dehydrogenase (acylating)
methylthioribulose-1-phosphate dehydratase
minichromosome maintenance protein 4 (cell division control protein 54)
tRNA threonylcarbamoyladenosine biosynthesis protein
UTP-glucose-1-phosphate uridylyltransferase
cytochrome c oxidase assembly protein subunit 17
cytochrome c1, heme protein, mitochondrial
dolichyl-phosphate-mannose-protein mannosyltransferase
actin like protein 2/3 complex, subunit 1A/1B
bifunctional purine biosynthesis protein ADE17
transcription initiation factor TFIID subunit 7
DNA replication complex GINS protein PSF1
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
pre-mRNA-processing ATP-dependent RNA helicase PRP5
inositol phosphosphingolipid phospholipase
ATP synthase subunit alpha, mitochondrial
small nuclear ribonucleoprotein B and B'
serine/threonine-protein phosphatase 2A activator 2
exosome non-catalytic core subunit RRP46
26S proteasome non-ATPase regulatory subunit 9
chromatin modification-like protein EAF6
phenylalanyl-tRNA synthetase alpha chain
6-phosphogluconate dehydrogenase, decarboxylating 1
transcription initiation factor TFIIF subunit beta
DNA-directed RNA polymerase II subunit RPB4
mitochondrial 54S ribosomal protein YmL49
V-type H+-transporting ATPase 54 kDa subunit
glucosamine-fructose-6-phosphate aminotransferase
sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
carbamoyl-phosphate synthase arginine-specific large chain
DNA-directed RNA polymerase II subunit RPB7
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein
molybdopterin synthase sulfur carrier subunit
ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum
eukaryotic translation initiation factor 3 subunit D
RNA-binding ribosome biosynthesis protein MAK21
26S proteasome non-ATPase regulatory subunit 10
translation initiation factor 3 subunit J
acetate non-utilizing protein 9, mitochondrial
protein phosphatase PP2A regulatory subunit B
ATP-binding cassette, subfamily G (WHITE), member 2
mitochondrial DNA replication protein YHM2
DNA-directed RNA polymerase II subunit RPB3
IQ domain-containing protein containing GTPase activating protein
phospho-2-dehydro-3-deoxyheptonate aldolase
NAD(P)H-dependent D-xylose reductase xyl1
acetylornithine aminotransferase, mitochondrial
translation initiation factor eIF-2B subunit gamma
L-aminoadipate-semialdehyde dehydrogenase
MFS transporter, FHS family, L-fucose permease
piT family inorganic phosphate transporter
tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit
nicotinamide-nucleotide adenylyltransferase
transcription initiation factor TFIID subunit 10
DNA-repair protein complementing XP-A cells
double-strand break repair protein MRE11
methylated-DNA-protein-cysteine methyltransferase like protein
pH-response regulator protein palA/rim-20
aquaglyceroporin like protein, other eukaryote