Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence.
type: Entry
definition: Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence.
sequence version: NZ_CP010898.2
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP010898.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03342424
keyword: RefSeq
source: Pandoraea vervacti
organism: Pandoraea vervacti
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP010898.2.\n\nOn Dec 18, 2016 this sequence version replaced NZ_CP010898.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2\nGenome Coverage :: 185x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 02:48:57\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,985\nCDSs (total) :: 4,903\nGenes (coding) :: 4,825\nCDSs (with protein) :: 4,825\nGenes (RNA) :: 82\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 66\nncRNAs :: 4\nPseudo Genes (total) :: 78\nCDSs (without protein) :: 78\nPseudo Genes (ambiguous residues) :: 0 of 78\nPseudo Genes (frameshifted) :: 19 of 78\nPseudo Genes (incomplete) :: 55 of 78\nPseudo Genes (internal stop) :: 8 of 78\nPseudo Genes (multiple problems) :: 4 of 78\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 100282
topology: circular
so has quality: SO_0000988
location: 1..100282
location: region:1-100282:1
RO_0002162: 656178

NZ_CP010898
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03342424
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequencing of Pandoraea vervacti NS15 sp. nov.
author: Chan, K.-G.
journal: Unpublished

2
title: Direct Submission
author: Ee, R.
author: Lim, Y.-L.
author: Yin, W.-F.
author: Chan, K.-G.
journal: Submitted (17-NOV-2016) Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia
comments: Sequence update by submitter

3
title: Direct Submission
author: Chan, K.-G.
journal: Submitted (17-FEB-2015) Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100282:1
position: 100282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-100282:1:source
so part of: sequence
organism: Pandoraea vervacti
mol type: genomic DNA
strain: NS15
isolation source: uncultivated field soil
culture collection: DSM:23571
type material: type strain of Pandoraea vervacti
plasmid: pPV15
country: Turkey: Mugla
collection date: 2010
collected by: Sahin N
identified by: Sahin N

656178
type: Taxonomy
SIO_000068: taxonomy

UC34_RS24575
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24575
old locus tag: UC34_24830
so part of: sequence
location: join(100108..100282,1..197)
location: region:1-100282:1
so has part: feature:100108-100282:1:exon
so has part: feature:1-197:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:100108-100282:1:exon

position:100108:1
position: 100108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-197:1:exon

position:197:1
position: 197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UC34_RS24575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24575
old locus tag: UC34_24830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007974938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MELGNRDRGKIDLPPSDKVDRVLELTVNLLVVAFVLLPGLANAQSAGGGAFDGITQFLKSVTQLLIYEWGYYIGIITLAIQGYRWKTGRIDMMALGGWGLGIGLVFFAPNIVSDLKSRAGGSV
SIO_010081: UC34_RS24575
subclass of: SO_0000673
so part of: UC34_RS24575
location: join(100108..100282,1..197)
location: region:1-100282:1
so has part: feature:100108-100282:1:exon
so has part: feature:1-197:1:exon

WP_084071088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100108-100282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-197:1:exon

UC34_RS24580
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24580
old locus tag: UC34_24835
so part of: sequence
location: 194..493
location: region:194-493:1
so has part: feature:194-493:1:exon
subclass of: SO_0000010

position:194:1
position: 194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493:1
position: 493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194-493:1:exon

UC34_RS24580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24580
old locus tag: UC34_24835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSQDAPLLDEGEPLVAAMTRPTMVGGLTLASLAMSFYFPGMAALITRSLWAAALIPVLLLISYLVCLKDVYLFDILSAATHLKACPNQRLWGCRRYAPR
SIO_010081: UC34_RS24580
subclass of: SO_0000673
so part of: UC34_RS24580
location: 194..493
location: region:194-493:1
so has part: feature:194-493:1:exon

WP_047909192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194-493:1:exon

UC34_RS24585
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24585
old locus tag: UC34_24840
so part of: sequence
location: 516..3179
location: region:516-3179:1
so has part: feature:516-3179:1:exon
subclass of: SO_0000010

position:516:1
position: 516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3179:1
position: 3179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516-3179:1:exon

UC34_RS24585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24585
old locus tag: UC34_24840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005931796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion protein
translation: MSLSMPVPPGASADAREMALSDMIPYTVHYDDETVITKDDGLVQVIKLDGLYFESLSTEQIKQFETRRNTVLRSIANSDRGIYVHLIRRKVNQYPAGEGGTWFARKFNAAWRERYRQRSFYVNEIYISIVRNRFRHGAPGVLDRLFSLVSGEKLTQDDLASFEEQAKDVHEASNFVVQTLAAYGARKLRVQRRPQWVSDTVSDTVSAAEARVAIEQFKLDWHQFEGDLGRRGSYGRAEVLDYLGEDYTEIGAFLHYLINLEDERVPVTELPLDRTLAVSWVDFRMVGNMMAIENLSGTRVAAMLSMAEWPSRTPSRMLDEFLQQPVEYIITQSFFFTDRISAEHDMRQERRRLAVNDREGVAEEDKDEITRGLQDLTRGRSVNGLHHLTMLVHVPATVKLVDALDNRRETIAELDAAVGLLKKAFVNLGVKPVREWFALETFFWAQLPGQAQHFMGRRGKIKSGNFAGFASLHNFAVGKIDGSLWGPAIMPFETESGTAYYFNFHREMEGMVAGHFALTADTGAGKTTLLAALVTMADKALPRVFWFDNREGAKVFMCMMGGRHTTLSVQGTTGWNPFRLPDTPENRAYLVELLTLMRTCYGGKLVPDDIDRFKSAVIENYELPYADRRLRNVAWCFGQGELAKDMRVWHGANGVAGANAGVFDNETDNIDLSTCRHYCYEMRQLIKDGTARPELPVVLSYPFHRIEQSMNGEPFIIVLEEGQNLVKHAYWREKIDSYIMQIRRKNGILGFVTPDAKFLYSETDSIKKQTATKLYLPNGNASRADLIDELELTPAEYDFIRDTPPEAYKFLIRRGNESIRAVFDLSDLPEFIPVLSSNDKGVALMHELMREFGTEDPEVWGPVFMERALARNTHNLAHNLTSKGARV
SIO_010081: UC34_RS24585
subclass of: SO_0000673
so part of: UC34_RS24585
location: 516..3179
location: region:516-3179:1
so has part: feature:516-3179:1:exon

WP_072617605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516-3179:1:exon

UC34_RS24590
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24590
old locus tag: UC34_24845
so part of: sequence
location: 3176..3844
location: region:3176-3844:1
so has part: feature:3176-3844:1:exon
subclass of: SO_0000010

position:3176:1
position: 3176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844:1
position: 3844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3176-3844:1:exon

UC34_RS24590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24590
old locus tag: UC34_24845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKNAVIAFTVAVAGASLGISAPALAGGIPTFDEATLLQLQQQFKQLEQQYETLKNQYAAVTGTYGRGQIGLSDALNAASVVPGSWQEVVAQQQSGAFAAKQADYEKLIQTMPQDVFANPQAQDATSYKMSTDAVRAALAGGDTLYSEVQTHLNNLARLSQQIDVTTNIKDAQDLQNRISSENGMLQSAMAKLNAMNMNLQANMVNQQNQATAENQQFYQWKK
SIO_010081: UC34_RS24590
subclass of: SO_0000673
so part of: UC34_RS24590
location: 3176..3844
location: region:3176-3844:1
so has part: feature:3176-3844:1:exon

WP_072617593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3176-3844:1:exon

UC34_RS24595
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24595
old locus tag: UC34_25500
so part of: sequence
location: 3897..4112
location: region:3897-4112:1
so has part: feature:3897-4112:1:exon
subclass of: SO_0000010

position:3897:1
position: 3897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4112:1
position: 4112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897-4112:1:exon

UC34_RS24595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24595
old locus tag: UC34_25500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYIILVLNIVTAPAWVPLWMMKKGGRMFMMLVLAALLSGCASTSNKFDKSPCACDFKPLNTGNEGSNVHA
SIO_010081: UC34_RS24595
subclass of: SO_0000673
so part of: UC34_RS24595
location: 3897..4112
location: region:3897-4112:1
so has part: feature:3897-4112:1:exon

WP_072617594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3897-4112:1:exon

UC34_RS24600
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24600
old locus tag: UC34_25505
so part of: sequence
location: 4105..4512
location: region:4105-4512:1
so has part: feature:4105-4512:1:exon
subclass of: SO_0000010

position:4105:1
position: 4105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512:1
position: 4512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4105-4512:1:exon

UC34_RS24600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24600
old locus tag: UC34_25505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNYLWTWILMGSAIVLIGGYGLLRMMSSEPPMPMPPSPLAPPVTSAPIVTAIGGNPLLTADKIAVTRWFPGHCFAEIYNKEPSFGGRLIPGCIADVIQHVRADTGITLTEKDIYAPAVLSHFKQVYGNDDLWRQ
SIO_010081: UC34_RS24600
subclass of: SO_0000673
so part of: UC34_RS24600
location: 4105..4512
location: region:4105-4512:1
so has part: feature:4105-4512:1:exon

WP_072617595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4105-4512:1:exon

UC34_RS24605
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24605
old locus tag: UC34_24850
so part of: sequence
location: 4500..5363
location: region:4500-5363:1
so has part: feature:4500-5363:1:exon
subclass of: SO_0000010

position:4500:1
position: 4500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5363:1
position: 5363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500-5363:1:exon

UC34_RS24605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24605
old locus tag: UC34_24850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MATMTIAGLVGAADGVTQSFLTQTYPALAGAIEAPLYWGVVLYWTVYGYKVYAGHEPMKWNSVLAKAFMTTAVFATLNWGGLGQRIYVVFVSFMESAASTIMAEQSTASMLDALYNNVGHVATLLQKGSGYEFGMILEGFGLFVVNCLLFLLALVYMTIAKFGLAITMVLCPLFIGFLMFPQTRQWFMNWLSMMLNFCFIYILVIAIVRFGFLAFSDAIKEAGNAASVTDASRITTQQVSYLYIVEGALVMFMLQVKEWAATLSGGATVQGVSLLLMVGRMFTGAPR
SIO_010081: UC34_RS24605
subclass of: SO_0000673
so part of: UC34_RS24605
location: 4500..5363
location: region:4500-5363:1
so has part: feature:4500-5363:1:exon

WP_072617596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4500-5363:1:exon

UC34_RS24610
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24610
old locus tag: UC34_24855
so part of: sequence
location: 5360..6034
location: region:5360-6034:1
so has part: feature:5360-6034:1:exon
subclass of: SO_0000010

position:5360:1
position: 5360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034:1
position: 6034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5360-6034:1:exon

UC34_RS24610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24610
old locus tag: UC34_24855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MNFGSATFKGDANTQSLQLGGSNKLKQERNRAYLFIGLLLFVVGGMASAITVLASIHTVIPVVSVMDANGHVLKQQVVDRQTITAQESFVQSQVYDFIMDCNTFDPAWRQRFADLCRLHATPDVARQYDAETAAENPQNPYYLVGQGGRRYPKITGITSLGKDAYQVSFQSITEKAGTEPKTEYYTALVRYTFTFKPLALGDRWENALGFAATAYRKDQELSRQ
SIO_010081: UC34_RS24610
subclass of: SO_0000673
so part of: UC34_RS24610
location: 5360..6034
location: region:5360-6034:1
so has part: feature:5360-6034:1:exon

WP_044458717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5360-6034:1:exon

UC34_RS24615
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: virB9
locus tag: UC34_RS24615
old locus tag: UC34_24860
so part of: sequence
location: 6100..6924
location: region:6100-6924:1
so has part: feature:6100-6924:1:exon
subclass of: SO_0000010

position:6100:1
position: 6100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6924:1
position: 6924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6100-6924:1:exon

UC34_RS24615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: virB9
locus tag: UC34_RS24615
old locus tag: UC34_24860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MKPNAASLAIALLAGVCVPLALTPAPAWAAKKPKQLVTDDRVKQVAYDPNQVYELVGTYGYQTSIEFADDETVKVVTVGDSIAWQTVPYQNRLFIKPVEPNAATNLTVITDKRTYYFKLTSAKNRASQTFLVRFIYPNTNTGLAGKVGGGGRSDHGFDPAKLNLDYGTSGDKSAIRLTRAFDDGQFTYFLFDANAEIPTVYTVGPDGTESLVNTRREGTYLVVERTASLFTLRNGNAYLCVQNNAHPYQRALGGPESDTVSSPARDPTHPGGGN
SIO_010081: UC34_RS24615
subclass of: SO_0000673
so part of: UC34_RS24615
location: 6100..6924
location: region:6100-6924:1
so has part: feature:6100-6924:1:exon

WP_044458686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6100-6924:1:exon

UC34_RS24620
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24620
old locus tag: UC34_24865
so part of: sequence
location: 6926..8155
location: region:6926-8155:1
so has part: feature:6926-8155:1:exon
subclass of: SO_0000010

position:6926:1
position: 6926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8155:1
position: 8155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6926-8155:1:exon

UC34_RS24620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24620
old locus tag: UC34_24865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005931779.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MSDPARQPEEDREAAVREWEQHHHHSLVADGRKRTAGGIAMVAIAAAVLGAAGYIKHVSSEPAKPAGNSELSIAERKPVPKLKDQEVAGVPVAASAPAALTTTPASATPGDDPMAAQREQMEMQRQEQARRMLEARMKSAIIAPNSNNPAAGARGDAGQAHAGALSGGSGGSGGGGAQDPNSRFARAVSGNGVAVSQAKQIDNLPYKILQGKLIEAVLEPRAISDLPGMVCATVQRDVYGAQDRHKLIPWGSRVCGVYSAEVHKGQDRLFVIWNTVRRPDGVEVALDSAGADQLGTAGMGGLVDTHFAEVFGMSALLSIIGAGAATVGVNPVDQYNSAAAYRQSVQQAAAQTSQSVLQPYINIAPTITVPAGSRVRIYVNKDLDFTPVYQADIDTTRDAARHGGVTFIQ
SIO_010081: UC34_RS24620
subclass of: SO_0000673
so part of: UC34_RS24620
location: 6926..8155
location: region:6926-8155:1
so has part: feature:6926-8155:1:exon

WP_044458687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6926-8155:1:exon

UC34_RS24625
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: virB11
locus tag: UC34_RS24625
old locus tag: UC34_24870
so part of: sequence
location: 8166..9188
location: region:8166-9188:1
so has part: feature:8166-9188:1:exon
subclass of: SO_0000010

position:8166:1
position: 8166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9188:1
position: 9188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8166-9188:1:exon

UC34_RS24625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: virB11
locus tag: UC34_RS24625
old locus tag: UC34_24870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343655.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSQIASFRAKLSLLTDYLDDPGITEVAINRPGEVWIGRQGQRFMQHADVPELNYRLLESLADVTAAYTNQETDRERPLLAATMPINLAEGVDDTERGGYRVQVVRPPAVEEKTIALCIRKPTLLDIGLDQYREQGAFDRVNETREDGDDSDERLRELYQGRAWEAFLRGAVRAHKNIVISAGANAGKTTLLNALLKEIPQQERIVTIEDAREIRPRQRNCLHMLYSRGGQGVARVTAVELLEAMLRLTPDRPIMGELRGAEAYAYLELLNSGHSGSITTIHADSPSLMYERLSQMVMRFGAAMSRDQIIAYAKSLIQVVVQFKRAADGRRYVSEILYEGG
SIO_010081: UC34_RS24625
subclass of: SO_0000673
so part of: UC34_RS24625
location: 8166..9188
location: region:8166-9188:1
so has part: feature:8166-9188:1:exon

WP_044458688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8166-9188:1:exon

UC34_RS24630
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24630
old locus tag: UC34_24875
so part of: sequence
location: 9256..10185
location: region:9256-10185:1
so has part: feature:9256-10185:1:exon
subclass of: SO_0000010

position:9256:1
position: 9256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10185:1
position: 10185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9256-10185:1:exon

UC34_RS24630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24630
old locus tag: UC34_24875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLPMPLMLPLTARAQTPAQPQPQPQSMPFEIPFETLAAQCAPDVHPSTLRGVVSTESSGNPYAIGVVGARLERQPRTLAEAVATARELERQGFNFSMGLGQVNRGNLARYGETYETVFDPCRNLKAGGAILKDCYARAKARMRDEQRALRAAFSCYYSGNFARGFRPDKAGQPSYVQKVVAHATDAVPPIPVVPAIEPLEPTKPPDTDGAIPVLPAAGAAAESAKSAGAPPQWVFFAHAPSHEEQATPSPTFSLSGAPDSPAVQVRRVTPDTADMNGAEGAPREAHAVRTKRPTANNVQKEAPFVQFAN
SIO_010081: UC34_RS24630
subclass of: SO_0000673
so part of: UC34_RS24630
location: 9256..10185
location: region:9256-10185:1
so has part: feature:9256-10185:1:exon

WP_044458718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9256-10185:1:exon

UC34_RS24635
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24635
old locus tag: UC34_24880
so part of: sequence
location: 10246..10851
location: region:10246-10851:1
so has part: feature:10246-10851:1:exon
subclass of: SO_0000010

position:10246:1
position: 10246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10851:1
position: 10851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10246-10851:1:exon

UC34_RS24635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24635
old locus tag: UC34_24880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966857.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNWLVALLIVGAAASAHASDFGCKVLLCLANPASNGGPQGVAECVAPIDQLYHDLDKGRPFPTCDLADGNDGGSYARQVYDPYDPCPSPLRPAARGTYVVQGRRNVGNGGNAGSGGIGWDGSGQYTLSGQPQISEAQSGQSGGGIAPRACVSKPVGTYTVGSHDDSVTVNVFEQVLWQPAQNPRAIDVFINNVRQQRVRW
SIO_010081: UC34_RS24635
subclass of: SO_0000673
so part of: UC34_RS24635
location: 10246..10851
location: region:10246-10851:1
so has part: feature:10246-10851:1:exon

WP_044458689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10246-10851:1:exon

UC34_RS24640
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24640
old locus tag: UC34_24885
so part of: sequence
location: 10907..11488
location: region:10907-11488:1
so has part: feature:10907-11488:1:exon
subclass of: SO_0000010

position:10907:1
position: 10907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11488:1
position: 11488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10907-11488:1:exon

UC34_RS24640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24640
old locus tag: UC34_24885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MAFAAGAEAHGLTLGGLAGGYNAATAEPGPTARAPTAEAARVAEVAFSPEAGGEALVLKAIGAATTSIRLAGYLFTSPPVVRALLDAKQRGVDVAVVVDDKGTWSTTSRQALNLLVNAGIPTRTVSVYAVHHDKYIVIDGLHVETGSFNFTVGAAKRNSENVLVLWNYPTLAAQYLAHWQSRWEQGQPYQSSH
SIO_010081: UC34_RS24640
subclass of: SO_0000673
so part of: UC34_RS24640
location: 10907..11488
location: region:10907-11488:1
so has part: feature:10907-11488:1:exon

WP_044458719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10907-11488:1:exon

UC34_RS24645
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24645
old locus tag: UC34_24890
so part of: sequence
location: 11513..13075
location: region:11513-13075:1
so has part: feature:11513-13075:1:exon
subclass of: SO_0000010

position:11513:1
position: 11513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13075:1
position: 13075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11513-13075:1:exon

UC34_RS24645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24645
old locus tag: UC34_24890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MQKHEVENATLFFGVSLPIAGWFAGAWAAHVPLRPLPEALTAALQMTPHHPLFTGGAVLGLGLAAASGYLVHEYGDDGFRGAPYRRWMRGARMANWHRVRRLVNSANRRENRRRRKDEATAPPLAPIMIGAMPMPIHLENRNTLICASVGAGKSVAMESMIASVIKRRDKMTVIDPNGTFYSKFGFPGDTILNPFDRRTAGWTLFNEIKGVHDFDCMAKSVIPPQVDPNDEQWCAYARDVLADTMRKLVETDNPDQDRLVNLLVREDGEAIREFLANTDSQGYFRVNAEKAIASIQFMMNKYVRPLRFMSQGDFSLHTWVHDPRAGNLFITWREDMRTAQRPLVATWIDTICATILSYAPMTGARLWLFLDELESLGKLESFVPAATKGRKHGLRMVGTIQDWAQLDEAYGTDAAKTLLACFRNYLIFGASNALNADKASEILGKQHVERIQVTSNAGRGGASRSRHVLASPPEPVVLDSEISNLRDLHGYVMFAEDFPIARITLPYVKYPHRAAAIEVG
SIO_010081: UC34_RS24645
subclass of: SO_0000673
so part of: UC34_RS24645
location: 11513..13075
location: region:11513-13075:1
so has part: feature:11513-13075:1:exon

WP_044458690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11513-13075:1:exon

UC34_RS24650
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24650
old locus tag: UC34_24895
so part of: sequence
location: 13088..16078
location: region:13088-16078:1
so has part: feature:13088-16078:1:exon
subclass of: SO_0000010

position:13088:1
position: 13088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16078:1
position: 16078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13088-16078:1:exon

UC34_RS24650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24650
old locus tag: UC34_24895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004542720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLNVTPIRGNNQYAAAHYFAAADDYYAKEHPGEWQGQGAQALGLTGPIEQTQFARLLDGRLPNGERIQATFDTTAHKKRMGLDLTFSAPKSVSMQALVAGDWEVTAAHDRAVTRALEQVERLAEARRKVKGKSCHERTGNMVIGKFRHEMSRARDPQLHTHAVVLNMTRRADGAWRALSNEDIFRVQHEIDALYKAELAHSLQELGYAIRLVDDKGKFELAHISRDQIEAFSARSYVIEQALADAGKTRASATALEKQVISLATRPRKDESERQIIKQYWLEKSRELGIDYGARSPPDGRSASPRGALDRAEAMSLPAGLTPAQAVVQYAINLLTEREAVVQESALTATALRRAVGLAGMEEVRAEIRRLVAHGALIEAVPAYRMAAPASAPTDTPVLSPAAWACYLRERKGWTHQAAREYVTHAIQRGSLVPAETRYTTHKALAREKAILAIERSGRAALAPIMTSAAVKTALEGSRLNADQRLAVEAIVATPHRFVGIQGDAGTGKTYTVNQAVALIRQASSGGGGERGQSAYHTVALAPYGNQVTALRNAGLDAHTLASFLRAKDRPVDARTIVVLDEAGVVGARQMEQLMRTIERAGARMVMLGDTKQTEAIEAGKPFAQLQQGGMPTTRIREITRQEDRELKTAVAHAAEGRVTQSLAHLNHVEEFREPSERHRAIVADYIALTDAERRDTLIVAGTNDARREINRMVRESLALTGRGREFETLTRVDMTQAQRRFAPSYQPGMVIQPERDYQRAGLTRGEIYRVREALPGNMLVLQRPDGTTALINPRRATQLSVYQLERAELSVGDTVRMNRNDPGRDLTNGDRLRVAAVSGGAVTLESLESIAQRDGRPVRSLALPCARPLHLEHAYASTVHSAQGLTSERALIALDTRSRTTSMNLYYVAISRARHEARVYTNSLGELPDAIARRFDKNTALALQRERQLLRREAGLATKGALDGTSALSREPHESHEPQRKAPASGKQPSGYGRFD
SIO_010081: UC34_RS24650
subclass of: SO_0000673
so part of: UC34_RS24650
location: 13088..16078
location: region:13088-16078:1
so has part: feature:13088-16078:1:exon

WP_044458691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13088-16078:1:exon

UC34_RS24655
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24655
old locus tag: UC34_24900
so part of: sequence
location: 16376..16735
location: region:16376-16735:1
so has part: feature:16376-16735:1:exon
subclass of: SO_0000010

position:16376:1
position: 16376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16735:1
position: 16735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16376-16735:1:exon

UC34_RS24655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24655
old locus tag: UC34_24900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTDAQQAIEQTAPTTKAAQLREVMPQIEKKLAAGVQLGTIHQALTDAGFELTFQTLKTYLYRYRKHRAKSAGRQAEPVDSRTPRHRRYPGPRRLSRPQQMAGLPRRENRSQCRRLIV
SIO_010081: UC34_RS24655
subclass of: SO_0000673
so part of: UC34_RS24655
location: 16376..16735
location: region:16376-16735:1
so has part: feature:16376-16735:1:exon

WP_237165377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16376-16735:1:exon

UC34_RS24660
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24660
old locus tag: UC34_24905
so part of: sequence
location: 16946..17965
location: region:16946-17965:1
so has part: feature:16946-17965:1:exon
subclass of: SO_0000010

position:16946:1
position: 16946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17965:1
position: 17965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16946-17965:1:exon

UC34_RS24660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24660
old locus tag: UC34_24905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013688836.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKHTTVGVDIAKNVMQLHYIDAETGEIVNKPVRRGAFLEHFANLAPCLIGMEACGGSQHWARKLTTMGHEVKLMPGKFVKAFVMGNKNDAADAKAIWLAVQHAGKSVAVKTETQQAVLGLHRMREQLVKFRTMQINGLRGLLAEYGEVTGKGRAALDKAIPGVLERLVDRLPAILIDTLREQWNGLAELDKQIASIERRLQTWMREDKASKAIAAIPGVGLLTATAAVATIGDAKTFKSGREFAAWIGLVPRQTGTGGKVHLHGISKRGDIYLRKLLIHGARSVLCLAKEPGPWAEGIKKRRPLNVAIVAQANRIARTIWAILAHDRQYERGYVSVKPV
SIO_010081: UC34_RS24660
subclass of: SO_0000673
so part of: UC34_RS24660
location: 16946..17965
location: region:16946-17965:1
so has part: feature:16946-17965:1:exon

WP_044456547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16946-17965:1:exon

UC34_RS24665
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24665
old locus tag: UC34_24910
so part of: sequence
location: complement(18194..19780)
location: region:18194-19780:-1
so has part: feature:18194-19780:-1:exon
subclass of: SO_0000010

position:18194:-1
position: 18194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19780:-1
position: 19780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18194-19780:-1:exon

UC34_RS24665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24665
old locus tag: UC34_24910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012339753.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MSFSRANLPDDIDALKALVLASQQVLHEREIQLAALQTRLTSREQEIAHLKLLIDKLKRMQFGRKSEKLARQIEQLELRLEDLQAAEGATEAATPIKSQVKVRSERQALPEHLAREERVYLPEAEDCPACGGKLKPLGEDVSEQLEYVRAHFRVIRHRRPKLACACCDTIVQQPAPSRPIERGVAGPHLLAHIITSKFLDHQPLYRQQAIYARDGVELEAGQMGHWLGRVSWLLNPLVDAVRAYALGGTKVHGDDTPLPVLEPGRGSTKTGRLWVYVRDDRPCGSHEAPAVWFAYTPDRRGEHPQRHLASFNGVLQADAFAGYAPLYENDSIREAACMAHARRKIYDLHAVRPNAITEEALHRIGELYRIEAEIRGKPPDERRQVRQAQAVPRLEALRQWYESVLPTLSAKSDTTRAIQYSLNRWPALAYYCEDGQAEIDNLIAERALRGVAIGRRNYLFAGADSGGERAAAMYSLIGTARLNGINPEAYLAYVLERIADHPVNRIDELLPWNVAQQLPDIAKIEPIR
SIO_010081: UC34_RS24665
subclass of: SO_0000673
so part of: UC34_RS24665
location: complement(18194..19780)
location: region:18194-19780:-1
so has part: feature:18194-19780:-1:exon

WP_044453172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18194-19780:-1:exon

UC34_RS24670
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: tnpB
locus tag: UC34_RS24670
old locus tag: UC34_24915
so part of: sequence
location: complement(19839..20186)
location: region:19839-20186:-1
so has part: feature:19839-20186:-1:exon
subclass of: SO_0000010

position:19839:-1
position: 19839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20186:-1
position: 20186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19839-20186:-1:exon

UC34_RS24670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: tnpB
locus tag: UC34_RS24670
old locus tag: UC34_24915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIGLPSNTRVWIAAGVTDMRCGFNGLAAKVESVLHKDPFSGHIFLFRGRRGDLLKALCWSDGGLCLLAKRLEKGRFAWPRADGGVVALTTAQLSLLLEGFDWREPIDAARPRSAR
SIO_010081: UC34_RS24670
subclass of: SO_0000673
so part of: UC34_RS24670
location: complement(19839..20186)
location: region:19839-20186:-1
so has part: feature:19839-20186:-1:exon

WP_044453173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19839-20186:-1:exon

UC34_RS24675
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24675
old locus tag: UC34_24920
so part of: sequence
location: complement(20183..20671)
location: region:20183-20671:-1
so has part: feature:20183-20671:-1:exon
subclass of: SO_0000010

position:20183:-1
position: 20183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20671:-1
position: 20671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20183-20671:-1:exon

UC34_RS24675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24675
old locus tag: UC34_24920
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MWVLLRPPNEMVGTKVDKVLSVAVEAVPYRRANFPMEFKRATVEATLRPGASVALTARKAGINANLLFKWRRHYLAGAYGDVTPELVTRQSSAASVTEFVPVTITKALVGIATPTADQAVPTSRCSSRHEGKIELVMRGGTMRFDGPLSLELLRELISELRT
SIO_010081: UC34_RS24675
subclass of: SO_0000673
so part of: UC34_RS24675
location: complement(20183..20671)
location: region:20183-20671:-1
so has part: feature:20183-20671:-1:exon

WP_084070255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20183-20671:-1:exon

UC34_RS24680
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: stbB
locus tag: UC34_RS24680
old locus tag: UC34_24925
pseudo: true
so part of: sequence
location: 20836..21539
location: region:20836-21539:1
so has part: feature:20836-21539:1:exon
subclass of: SO_0000010

position:20836:1
position: 20836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21539:1
position: 21539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20836-21539:1:exon

UC34_RS24680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: stbB
locus tag: UC34_RS24680
old locus tag: UC34_24925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172642.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: StbB family protein
SIO_010081: UC34_RS24680
subclass of: SO_0000673
so part of: UC34_RS24680
location: 20836..21539
location: region:20836-21539:1
so has part: feature:20836-21539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20836-21539:1:exon

UC34_RS24685
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24685
old locus tag: UC34_24930
so part of: sequence
location: 21588..21941
location: region:21588-21941:1
so has part: feature:21588-21941:1:exon
subclass of: SO_0000010

position:21588:1
position: 21588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21941:1
position: 21941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21588-21941:1:exon

UC34_RS24685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24685
old locus tag: UC34_24930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELLQEADALVRRFEQADETLAARMEQATTDAAGKAFLTARLNFESVIDKNAVKLTEAGRHAAAQIGNQLNQGATQLVAVNLALERKMGRFVLLLVGFALVAGAVGGFVGARLAGL
SIO_010081: UC34_RS24685
subclass of: SO_0000673
so part of: UC34_RS24685
location: 21588..21941
location: region:21588-21941:1
so has part: feature:21588-21941:1:exon

WP_044458720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21588-21941:1:exon

UC34_RS24690
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24690
old locus tag: UC34_24935
so part of: sequence
location: complement(22025..22474)
location: region:22025-22474:-1
so has part: feature:22025-22474:-1:exon
subclass of: SO_0000010

position:22025:-1
position: 22025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22474:-1
position: 22474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22025-22474:-1:exon

UC34_RS24690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24690
old locus tag: UC34_24935
inference: COORDINATES: protein motif:HMM:NF023208.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3318 domain-containing protein
translation: MRKEIVLTRIAVERAELIQATHVARERLRNLGWVRYLLPGGFARLSSLNNLANIANADLTLAGLLQRYPLNSVASLALSGLSHTRVGRVVRPILQWGGLGVLVWRGIQRSQDKTNLSHPQTGSAAKLEASATSSTRAPVARNHGALPLM
SIO_010081: UC34_RS24690
subclass of: SO_0000673
so part of: UC34_RS24690
location: complement(22025..22474)
location: region:22025-22474:-1
so has part: feature:22025-22474:-1:exon

WP_044458694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22025-22474:-1:exon

UC34_RS24695
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24695
old locus tag: UC34_24940
so part of: sequence
location: complement(22575..22898)
location: region:22575-22898:-1
so has part: feature:22575-22898:-1:exon
subclass of: SO_0000010

position:22575:-1
position: 22575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22898:-1
position: 22898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22575-22898:-1:exon

UC34_RS24695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24695
old locus tag: UC34_24940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018419515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MLEIFQSRLELIGIELSEEKERLVGVAFLGLAAMLFGVLALMSLTALMIVVFWDTYRLPAVTGIVIVYFLLAGWCATRARDILREAPLPFGATLTEFKKDRNALRAD
SIO_010081: UC34_RS24695
subclass of: SO_0000673
so part of: UC34_RS24695
location: complement(22575..22898)
location: region:22575-22898:-1
so has part: feature:22575-22898:-1:exon

WP_237165378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22575-22898:-1:exon

UC34_RS24700
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24700
old locus tag: UC34_24945
so part of: sequence
location: complement(23050..23358)
location: region:23050-23358:-1
so has part: feature:23050-23358:-1:exon
subclass of: SO_0000010

position:23050:-1
position: 23050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23358:-1
position: 23358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23050-23358:-1:exon

UC34_RS24700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24700
old locus tag: UC34_24945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqjD family protein
translation: MSRVPTHKEKFMTDIKSVLADAEDLLKQAANTSGERAAELSAKALALLEQAREKASDLQVMVVEKSRQAARATDDYVHDHPWQAAAVGTGIGVVIGLLLNRK
SIO_010081: UC34_RS24700
subclass of: SO_0000673
so part of: UC34_RS24700
location: complement(23050..23358)
location: region:23050-23358:-1
so has part: feature:23050-23358:-1:exon

WP_044458696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23050-23358:-1:exon

UC34_RS24705
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24705
old locus tag: UC34_24950
so part of: sequence
location: 24108..24320
location: region:24108-24320:1
so has part: feature:24108-24320:1:exon
subclass of: SO_0000010

position:24108:1
position: 24108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24320:1
position: 24320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24108-24320:1:exon

UC34_RS24705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24705
old locus tag: UC34_24950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017235271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MNSDTIKGKWNQLKGEAKKQWGNLTDDDLLKVEGNRDKFVGVLQERYGEAKSKADVEREVDTWNEQHKLW
SIO_010081: UC34_RS24705
subclass of: SO_0000673
so part of: UC34_RS24705
location: 24108..24320
location: region:24108-24320:1
so has part: feature:24108-24320:1:exon

WP_044458697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24108-24320:1:exon

UC34_RS24710
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24710
old locus tag: UC34_24955
so part of: sequence
location: 24662..25546
location: region:24662-25546:1
so has part: feature:24662-25546:1:exon
subclass of: SO_0000010

position:24662:1
position: 24662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25546:1
position: 25546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24662-25546:1:exon

UC34_RS24710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24710
old locus tag: UC34_24955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008164395.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQDVQLVAKNPIPPARAESTGSAVSWGAVFAGAVIAAAVSAMLLTGGTGLGFLSMSPWSNAAPPVKALAVGSIVWLLVSQIIAYGVGGFITGRLRTKWSDALPDEVYFRDTAHGFLMWAVSVIIGLVLIGATTTSLVSGGTRAAASLTSSAATVVSQGVQVGNRGGLLDYFTDVLLRPTDPAAAPAQRDARPEVSRILARSMINGQVSDADRAYLVKLIAQYAGVDEASAQQRLTQIQTQFSQAVAQAEQKAKDAADEARKGLALFSIWAFVALLSGAFVASFSATIGGRMRER
SIO_010081: UC34_RS24710
subclass of: SO_0000673
so part of: UC34_RS24710
location: 24662..25546
location: region:24662-25546:1
so has part: feature:24662-25546:1:exon

WP_044458698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24662-25546:1:exon

UC34_RS24715
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24715
old locus tag: UC34_24960
pseudo: true
so part of: sequence
location: complement(25660..26329)
location: region:25660-26329:-1
so has part: feature:25660-26329:-1:exon
subclass of: SO_0000010

position:25660:-1
position: 25660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26329:-1
position: 26329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25660-26329:-1:exon

UC34_RS24715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24715
old locus tag: UC34_24960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006224317.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase family A protein
SIO_010081: UC34_RS24715
subclass of: SO_0000673
so part of: UC34_RS24715
location: complement(25660..26329)
location: region:25660-26329:-1
so has part: feature:25660-26329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25660-26329:-1:exon

UC34_RS24720
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24720
old locus tag: UC34_24965
so part of: sequence
location: complement(26326..26910)
location: region:26326-26910:-1
so has part: feature:26326-26910:-1:exon
subclass of: SO_0000010

position:26326:-1
position: 26326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26910:-1
position: 26910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26326-26910:-1:exon

UC34_RS24720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24720
old locus tag: UC34_24965
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTDFDAIYRASKDPWSVHTAWYEQRKRDLVLASLAQPRYTAALELGCGIGQITAPLASRCHVVHAVDMSPTAIRRCRKRLHAQGIANVALQVMTVPQAWPLHPGESVDLVIVSELAYYLPPEPFEQLLQQCFHSLSAGGQWVMCHYTPDFDDRQQATLALHEAVHRLDGLVRCVAHEDRQFRLDVWHKTKEPRS
SIO_010081: UC34_RS24720
subclass of: SO_0000673
so part of: UC34_RS24720
location: complement(26326..26910)
location: region:26326-26910:-1
so has part: feature:26326-26910:-1:exon

WP_044458700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26326-26910:-1:exon

UC34_RS24725
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24725
old locus tag: UC34_24970
so part of: sequence
location: complement(26907..27665)
location: region:26907-27665:-1
so has part: feature:26907-27665:-1:exon
subclass of: SO_0000010

position:26907:-1
position: 26907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27665:-1
position: 27665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26907-27665:-1:exon

UC34_RS24725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24725
old locus tag: UC34_24970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008351964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIG-L family deacetylase
translation: MDALSARLIAGEGTAEATWQRWFTAHPLPKVTARELLARNARLHVVAPHPDDEILGCGGTLRQLARAGVEIHIWAVTDGEASHPGSSHWTPARLAEARVSESLWAQQRLSLQCRRHRLGVPDGHVVRHESRLFDLLCPALSRGDTVMAPWQLDGHPDHEAVARACRRAAQARGARGIEVPIWGWHWADPSGNELPFERAVRVHLSCSDRAAKMHAIGAFRSQLSPDPSTGAPPVLPAYALARWQRSFEVFLL
SIO_010081: UC34_RS24725
subclass of: SO_0000673
so part of: UC34_RS24725
location: complement(26907..27665)
location: region:26907-27665:-1
so has part: feature:26907-27665:-1:exon

WP_044458701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26907-27665:-1:exon

UC34_RS24730
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24730
old locus tag: UC34_24975
so part of: sequence
location: complement(27653..28693)
location: region:27653-28693:-1
so has part: feature:27653-28693:-1:exon
subclass of: SO_0000010

position:27653:-1
position: 27653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28693:-1
position: 28693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27653-28693:-1:exon

UC34_RS24730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24730
old locus tag: UC34_24975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006219523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA/acyl-ACP dehydrogenase
translation: MNPSTKPARHILAALRTHLQQHDRPGRTYETLQTLIDEGFDTVPYPGTGETRARWQMLAEVATFDLCLAKLYESHIDALAILHELEGPPGPLEAGMRAVWCSESAQARVTLTPRGGNDREVILRGTKAWCSGARHVRSALVSAWDADTPCLVEVELAQAEIDVCPADWHAVGMADTHSFTVSFRGARARRVGAPGAYLSRAGFHHGAAGVAACWYGAATGIAEVVRETLLHSPGDPHALAHLGAIDVALAQAASVLRATAEAIDAHPARPCREAVRRARLAVEAVVEKILWHAPRAVGPSPMCRNARFARLLADLPVFIRQSHAERDLAAHGRALLERDGDGLWTL
SIO_010081: UC34_RS24730
subclass of: SO_0000673
so part of: UC34_RS24730
location: complement(27653..28693)
location: region:27653-28693:-1
so has part: feature:27653-28693:-1:exon

WP_052811327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27653-28693:-1:exon

UC34_RS25240
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25240
pseudo: true
so part of: sequence
location: complement(<28969..29255)
location: region:28969-29255:-1
so has part: feature:28969-29255:-1:exon
subclass of: SO_0000010

position:28969:-1
position: 28969
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29255:-1
position: 29255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28969-29255:-1:exon

UC34_RS25240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000994919.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ParB/Srx family N-terminal domain-containing protein
SIO_010081: UC34_RS25240
subclass of: SO_0000673
so part of: UC34_RS25240
location: complement(<28969..29255)
location: region:28969-29255:-1
so has part: feature:28969-29255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28969-29255:-1:exon

UC34_RS24745
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24745
old locus tag: UC34_24990
pseudo: true
so part of: sequence
location: complement(30667..31930)
location: region:30667-31930:-1
so has part: feature:30667-31930:-1:exon
subclass of: SO_0000010

position:30667:-1
position: 30667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31930:-1
position: 31930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30667-31930:-1:exon

UC34_RS24745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24745
old locus tag: UC34_24990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: UC34_RS24745
subclass of: SO_0000673
so part of: UC34_RS24745
location: complement(30667..31930)
location: region:30667-31930:-1
so has part: feature:30667-31930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30667-31930:-1:exon

UC34_RS24750
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24750
old locus tag: UC34_24995
so part of: sequence
location: complement(32618..32857)
location: region:32618-32857:-1
so has part: feature:32618-32857:-1:exon
subclass of: SO_0000010

position:32618:-1
position: 32618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32857:-1
position: 32857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32618-32857:-1:exon

UC34_RS24750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24750
old locus tag: UC34_24995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASVLTFPYKGYRVLCTATPTTHGGFRGAAKILWPAPGLFQEQQIGHAGDTIRQKEQVALESAASLARDWIDQHQEALW
SIO_010081: UC34_RS24750
subclass of: SO_0000673
so part of: UC34_RS24750
location: complement(32618..32857)
location: region:32618-32857:-1
so has part: feature:32618-32857:-1:exon

WP_157123390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32618-32857:-1:exon

UC34_RS24755
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24755
old locus tag: UC34_25000
so part of: sequence
location: complement(33138..33428)
location: region:33138-33428:-1
so has part: feature:33138-33428:-1:exon
subclass of: SO_0000010

position:33138:-1
position: 33138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33428:-1
position: 33428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33138-33428:-1:exon

UC34_RS24755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24755
old locus tag: UC34_25000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013588587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2471 family protein
translation: MDLLFAAVAAVKETVPAVVSRRRTAGVLTWALLHQIESEVLAEVAASGTHSPRMLGMLRAPAVLGYPKDDRPVSFDGHEFVPPALGAIVDAWRRVN
SIO_010081: UC34_RS24755
subclass of: SO_0000673
so part of: UC34_RS24755
location: complement(33138..33428)
location: region:33138-33428:-1
so has part: feature:33138-33428:-1:exon

WP_044458705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33138-33428:-1:exon

UC34_RS25570
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25570
so part of: sequence
location: complement(33533..33874)
location: region:33533-33874:-1
so has part: feature:33533-33874:-1:exon
subclass of: SO_0000010

position:33533:-1
position: 33533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33874:-1
position: 33874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33533-33874:-1:exon

UC34_RS25570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVDVFRLRRAGEKLSEADFLVSPPVRGYLCSWSYAGGYRAGTPLRVQAVTLTACGRASGAALLPPLHNFRVVRFNGGGLILAGDEEVEVRRRHSEVYRQAWFCRPASQRESG
SIO_010081: UC34_RS25570
subclass of: SO_0000673
so part of: UC34_RS25570
location: complement(33533..33874)
location: region:33533-33874:-1
so has part: feature:33533-33874:-1:exon

WP_157123391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33533-33874:-1:exon

UC34_RS24760
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: ltrA
locus tag: UC34_RS24760
old locus tag: UC34_25005
so part of: sequence
location: 34269..35801
location: region:34269-35801:1
so has part: feature:34269-35801:1:exon
subclass of: SO_0000010

position:34269:1
position: 34269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35801:1
position: 35801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34269-35801:1:exon

UC34_RS24760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: ltrA
locus tag: UC34_RS24760
old locus tag: UC34_25005
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012493229.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MMNEWEKSDSPIVATKLANNPGEPGAESAERRGGAKGNTDWSRTRRTQSRISVSQRLERVRQAARQRKKEKFTALFHLIDIDLLETAFFWLKRKAAAGVDGVTWHDYEQNLERNLEDLHSRLHRQAYRALPSRRRYIPKADGKQRPLGIAALEDKIVQRALVAVLNAIYETDFLGFSYGFRPRRSQHDALDALATGVARTSVSWILDADISRFFDTVNHDWLIRFVEHRIGDQRVIRLIRKWLKAGAMEDGVIEPSDEGTPQGSVISPLLANIYLHYVFDLWANQWRKRHAEGNVVIVRYADDIVIGFDKPHDAKRFRRAMQQRLEQFGLSVHPEKTRLIEFGRFAARNRVARGLGKPETFNFLGFTHISGRARDGRFMLMRKTRSDRLRAALKGIKEELRHRWHQSIPEQGDWLRRVVQGYFNYHAVPTNFSAMQAFRAHVIDPWRRALRRRSQKDDTTWAKMHRLAKQWIPRARVLHPWPVVRFDAKHPRQEPGARIAHAGICAGGVQ
SIO_010081: UC34_RS24760
subclass of: SO_0000673
so part of: UC34_RS24760
location: 34269..35801
location: region:34269-35801:1
so has part: feature:34269-35801:1:exon

WP_044458706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34269-35801:1:exon

UC34_RS25975
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25975
old locus tag: UC34_25010
pseudo: true
so part of: sequence
location: complement(35811..>36260)
location: region:35811-36260:-1
so has part: feature:35811-36260:-1:exon
subclass of: SO_0000010

position:35811:-1
position: 35811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36260:-1
position: 36260
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35811-36260:-1:exon

UC34_RS25975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25975
old locus tag: UC34_25010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020309499.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: UC34_RS25975
subclass of: SO_0000673
so part of: UC34_RS25975
location: complement(35811..>36260)
location: region:35811-36260:-1
so has part: feature:35811-36260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35811-36260:-1:exon

UC34_RS24770
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24770
old locus tag: UC34_25015
so part of: sequence
location: complement(36651..38462)
location: region:36651-38462:-1
so has part: feature:36651-38462:-1:exon
subclass of: SO_0000010

position:36651:-1
position: 36651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38462:-1
position: 38462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36651-38462:-1:exon

UC34_RS24770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24770
old locus tag: UC34_25015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004553608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTQTTTHAGERPFLDALAFTFRRWRAQPWRLAGVFTCALAVALGDVLAPLFAGRLINALAHDAAGDGALWRDALRAFCALTGLGLAGTVLRQTMLAQIIHLTLKMMSDIAGNAFHRVQRFSTDWHTNSFAGSTVRKITRGLWGLDLLNDTLLMALWPSFAMLVGTTLLLGVHWPVMGVIVGVGSIVYIVVTAIMALQCVAPAARLGNHWDTRLGGALADAITCNPVVKAFGAETREGARLERVISKWRARLRRAWGRSILSASVQSLMLVAMQATMLGVALWLWRARHANVGDIAFALTTFLVMQGYLRDMGMHIRNLQRAINDMEELVALERQPLGIENKPCARPIRICRGEIRFEHVTFGYRGTQRLYQDFSLEIAAGERIGLVGYSGSGKTTFIKLVQRLYDVAGGRILIDGQDIAQATQASLRSQIAIVQQEPLLFHRTLAENIAYARPDSRRADIERAARLASAHEFIAALPHGYDTLVGERGLKLSGGERQRVAIARAFLANAPVLILDEATSSLDSESEAAIQQAMARLMIGRTTIVVAHRLSTVRALDRLIVLDRGRIVEQGKHHELIRRDGGVYRKLFERQALELAKGLVGPSR
SIO_010081: UC34_RS24770
subclass of: SO_0000673
so part of: UC34_RS24770
location: complement(36651..38462)
location: region:36651-38462:-1
so has part: feature:36651-38462:-1:exon

WP_084071106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36651-38462:-1:exon

UC34_RS24775
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24775
old locus tag: UC34_25020
so part of: sequence
location: complement(39219..39845)
location: region:39219-39845:-1
so has part: feature:39219-39845:-1:exon
subclass of: SO_0000010

position:39219:-1
position: 39219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39845:-1
position: 39845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39219-39845:-1:exon

UC34_RS24775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24775
old locus tag: UC34_25020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013394638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTRKMQSNDPGLQELLFQAYETELGGEQVYTAALACVKNTDLEKEWNEYLEQTKNHQEVLREVFSAFGLDPDTRTPGREVVAHHGASLVKAIEMACQAGDEALAQITAAECVVLAETKDHQNWELLATVAQKTGGELGKVLQEAVSAVQTQEAHHLYHTMGWARELWIETLGYPAVLPPPEERKHAESAIGAARAEQARDSMVRSRH
SIO_010081: UC34_RS24775
subclass of: SO_0000673
so part of: UC34_RS24775
location: complement(39219..39845)
location: region:39219-39845:-1
so has part: feature:39219-39845:-1:exon

WP_044458708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39219-39845:-1:exon

UC34_RS24780
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: stbB
locus tag: UC34_RS24780
old locus tag: UC34_25025
so part of: sequence
location: 40414..41031
location: region:40414-41031:1
so has part: feature:40414-41031:1:exon
subclass of: SO_0000010

position:40414:1
position: 40414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41031:1
position: 41031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40414-41031:1:exon

UC34_RS24780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: stbB
locus tag: UC34_RS24780
old locus tag: UC34_25025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016715835.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB family protein
translation: MPRVETINAGSADTGALRLKGRDYGGLQEDLMTLDSAIVDVGASNVEEFIKQMGQFQGSHDEFDYFVVPAVSEKKQQTDTVNTIETLAGLRVPAQKIRVVFNKVELEDASDVPRLLRTIFGLHEDTRSFTLRADAVVFKNEIFERLRGLNKTVADVIADGTDYRAMLREASDEATRSRAVSMISAQRLARSAHRNLDNVYRALFR
SIO_010081: UC34_RS24780
subclass of: SO_0000673
so part of: UC34_RS24780
location: 40414..41031
location: region:40414-41031:1
so has part: feature:40414-41031:1:exon

WP_044458709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40414-41031:1:exon

UC34_RS24785
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24785
old locus tag: UC34_25030
so part of: sequence
location: 41080..41433
location: region:41080-41433:1
so has part: feature:41080-41433:1:exon
subclass of: SO_0000010

position:41080:1
position: 41080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41433:1
position: 41433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41080-41433:1:exon

UC34_RS24785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24785
old locus tag: UC34_25030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELLQEADALVRRFEQADETLAARMEQATTDAAGKAFLAARLNFESVIDKNAAKLTEAGRHAAAQIGNQINHNAAQAVAVNLALERKARRFVLLLVGFALVAGVADGFVGARLAGP
SIO_010081: UC34_RS24785
subclass of: SO_0000673
so part of: UC34_RS24785
location: 41080..41433
location: region:41080-41433:1
so has part: feature:41080-41433:1:exon

WP_044458723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41080-41433:1:exon

UC34_RS24790
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24790
old locus tag: UC34_25510
so part of: sequence
location: complement(41518..41967)
location: region:41518-41967:-1
so has part: feature:41518-41967:-1:exon
subclass of: SO_0000010

position:41518:-1
position: 41518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41967:-1
position: 41967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41518-41967:-1:exon

UC34_RS24790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24790
old locus tag: UC34_25510
inference: COORDINATES: protein motif:HMM:NF023208.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3318 domain-containing protein
translation: MRKEIVLTRIAVERAELIQATHVARERLRNLGWVRYLLPGGFARLSSLNNLANIANADLTLAGLLQRYPLNSVASLALSGLSHTRVGRVVRRILQWGGLGVLVWRGIQRSQDTTKLADPETGSVATPEAAVTSSAQAPVACNHDALPLM
SIO_010081: UC34_RS24790
subclass of: SO_0000673
so part of: UC34_RS24790
location: complement(41518..41967)
location: region:41518-41967:-1
so has part: feature:41518-41967:-1:exon

WP_052811329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41518-41967:-1:exon

UC34_RS24795
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24795
old locus tag: UC34_25040
so part of: sequence
location: complement(42068..42391)
location: region:42068-42391:-1
so has part: feature:42068-42391:-1:exon
subclass of: SO_0000010

position:42068:-1
position: 42068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42391:-1
position: 42391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42068-42391:-1:exon

UC34_RS24795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24795
old locus tag: UC34_25040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018419515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MLEIFQSRLELIGIELSEEKERLVGVAFLGLAAMLFGVLALMSLTALMIVVFWDTYRLPAVTGIVIVYFLLAGWCATRARDILREAPLPFGATLTEFKKDRNALRAD
SIO_010081: UC34_RS24795
subclass of: SO_0000673
so part of: UC34_RS24795
location: complement(42068..42391)
location: region:42068-42391:-1
so has part: feature:42068-42391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42068-42391:-1:exon

UC34_RS26080
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS26080
old locus tag: UC34_25045
so part of: sequence
location: complement(42543..42779)
location: region:42543-42779:-1
so has part: feature:42543-42779:-1:exon
subclass of: SO_0000010

position:42543:-1
position: 42543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42779:-1
position: 42779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42543-42779:-1:exon

UC34_RS26080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS26080
old locus tag: UC34_25045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009523744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF883 domain-containing protein
translation: MLRESSCPQIRGAAPLSAKALALLEQAREKASDLQVVVVEKSRQAARATDDYVHDHPWQAAAVGTGIGVVIGLLLNRK
SIO_010081: UC34_RS26080
subclass of: SO_0000673
so part of: UC34_RS26080
location: complement(42543..42779)
location: region:42543-42779:-1
so has part: feature:42543-42779:-1:exon

WP_269466328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42543-42779:-1:exon

UC34_RS24810
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24810
old locus tag: UC34_25055
so part of: sequence
location: 42829..44027
location: region:42829-44027:1
so has part: feature:42829-44027:1:exon
subclass of: SO_0000010

position:42829:1
position: 42829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44027:1
position: 44027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42829-44027:1:exon

UC34_RS24810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24810
old locus tag: UC34_25055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MEILTEPERRRRRTAQEKIAIVQETLEPGASVSAVARRHGVNANQVFGWRKQYQEGSLAAVKAGETVVPASELAAAIKEIKELQRLLGKKTLEVEILKEAVEWGRFKKPDCALALAAGGRPMKTVCEVLGVARSAVAVKRARSSDWRDGRRARVTNDAGLVEEIQAHVAHLPTYGYRRVWALLRRSREQSGAPCINVKRVYRVMREHQLLLRRPGVRQDKRRHDGRVAVERSNTRWCSDGFEFRCDDGTPLRVTFALDCCDREAISWAATTGGHSGDVVRDVMLAAVEQRFGTTQAAHPIEWLTDNGSAYIDYRTRSFARELGLEPLTTPVRSPQSNGMAESFVKTMKHDYVAYMDKPDAPTALSRLAIAFEHYNERHPHKALKYRSPREFRRNAVSST
SIO_010081: UC34_RS24810
subclass of: SO_0000673
so part of: UC34_RS24810
location: join(42829..43144,43144..44027)
location: region:42829-44027:1
so has part: feature:42829-43144:1:exon
so has part: feature:43144-44027:1:exon

WP_167370682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42829-43144:1:exon

position:43144:1
position: 43144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43144-44027:1:exon

UC34_RS25575
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25575
pseudo: true
so part of: sequence
location: complement(<44067..44153)
location: region:44067-44153:-1
so has part: feature:44067-44153:-1:exon
subclass of: SO_0000010

position:44067:-1
position: 44067
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:44153:-1
position: 44153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44067-44153:-1:exon

UC34_RS25575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018442479.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF883 family protein
SIO_010081: UC34_RS25575
subclass of: SO_0000673
so part of: UC34_RS25575
location: complement(<44067..44153)
location: region:44067-44153:-1
so has part: feature:44067-44153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44067-44153:-1:exon

UC34_RS24820
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24820
old locus tag: UC34_25065
so part of: sequence
location: complement(44321..45166)
location: region:44321-45166:-1
so has part: feature:44321-45166:-1:exon
subclass of: SO_0000010

position:44321:-1
position: 44321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45166:-1
position: 45166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44321-45166:-1:exon

UC34_RS24820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24820
old locus tag: UC34_25065
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MSYRTLLVHVDNSDQCRARVAFAAAMAARLPAHLTGLYLPFRPENCTAAAPTSRRFAGDPLRPESDVRRLAYAERTFSDVCDRQALVAEWLAPQSDDSCREMRTRARYTDLVIVGQEDRNDPETSPSLAFVDSVVLNSGRPVLILPYAGAPPTTFENILLAWDGGREAARAMVDALPLLRAAKVVRITNVRRADGSISLGPIPGADIAIFAARHGVPVEVTPELGGNDVDIGERLLSRAADHNAQLIVMGAYGHSRMQEWVLGGVTRTMLERMRIPVMMSH
SIO_010081: UC34_RS24820
subclass of: SO_0000673
so part of: UC34_RS24820
location: complement(44321..45166)
location: region:44321-45166:-1
so has part: feature:44321-45166:-1:exon

WP_044458711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44321-45166:-1:exon

UC34_RS24825
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24825
old locus tag: UC34_25520
so part of: sequence
location: 45282..47369
location: region:45282-47369:1
so has part: feature:45282-47369:1:exon
subclass of: SO_0000010

position:45282:1
position: 45282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47369:1
position: 47369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45282-47369:1:exon

UC34_RS24825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24825
old locus tag: UC34_25520
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing sensor histidine kinase
translation: MSGAGDVLLPGACTCEPQRSKSTSRGTGGKSVGINMLMSRLIARAASGPSLRRVDRLTIVVLFLLCVALALWGWVAVRTTLESNVAARFASRTAAATDKLAIALSAYREVVHHGAMATTAQTDENAWSEYVRQMHLAQRLPGLATFGACARDGDRIARRVAYSVRDEVALGPENTLVVAHAASATGAAYPLQAGTPGHKFLVLVSDAGPASGCAYAIVDIDTLVHVAIGPLVHDLTLLVAMPDASGHLCPVFDSMSPRAPGEPRPAVVYRAQTIVRYGTRPALFLTYSASGEFARLRGTGVAMLVLMLGVAMSGLTALAWALALRERRGARSLSARVAEDKRCCESRLYSVIQSVREAIITIDENHRIQIFNPTAENIFQCSAMDAIGTPLDRFIPARFREVHRAHIERFGLTGVTERRMGSGGQLAGLRADGAEFPMEASISQTVDASGKFYTVILRDVTEHRRIATALQTSRNELEKLSGRLQEVREAEKRRIARELHDDLGQRLTALKMDASLLRRSVDGHSPAGEGVAQIERAIDGIVVAVRQMAADLRPPMLDDLGLGPAIEWYIQDFSRRYGVAVDLTGAPTLPPVPPAVATGLFRIVQEALNNVAKHARATSVTIDLCCDTAYRLSISDNGRGLPERPPKPNSLGLISMRERARLLGGTLEVHSPAEGGTVVTAVIPRRLPPPAPPVL
SIO_010081: UC34_RS24825
subclass of: SO_0000673
so part of: UC34_RS24825
location: 45282..47369
location: region:45282-47369:1
so has part: feature:45282-47369:1:exon

WP_167370705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45282-47369:1:exon

UC34_RS24830
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24830
old locus tag: UC34_25075
so part of: sequence
location: complement(47374..48366)
location: region:47374-48366:-1
so has part: feature:47374-48366:-1:exon
subclass of: SO_0000010

position:47374:-1
position: 47374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48366:-1
position: 48366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47374-48366:-1:exon

UC34_RS24830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24830
old locus tag: UC34_25075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011563055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-dependent alcohol dehydrogenase family protein
translation: MRAMQLCKGARRLRLAALPVPAPGPTQVLVRVRVCGVCRTDLHVVDGDLPNVPDGVIPGHEIVGTVAALGARVEHLAVGERVGVPWLGSTCGGCHFCLTGRENLCGRAEFTGYTLNGGYAEYALAQARFTFRLPERYDDATAAPLLCAGLIGFRSLQMVGAARRIGIYGFGAAAHLIAQIATAQARDVYAFVRPGDERGIAFALAHGACWAGPSDALPPRSLDAAILFAPVGALVPQALAALERGGCVVCAGIHMSDLPSFPYRLMWGERQLRSVANLTRDDGLAFLALAERVPLRVATQRYALEDANEALDDLRSGAVAGAAVLNVQQT
SIO_010081: UC34_RS24830
subclass of: SO_0000673
so part of: UC34_RS24830
location: complement(47374..48366)
location: region:47374-48366:-1
so has part: feature:47374-48366:-1:exon

WP_044458727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47374-48366:-1:exon

UC34_RS24835
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24835
old locus tag: UC34_25080
so part of: sequence
location: complement(48403..48954)
location: region:48403-48954:-1
so has part: feature:48403-48954:-1:exon
subclass of: SO_0000010

position:48403:-1
position: 48403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48954:-1
position: 48954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48403-48954:-1:exon

UC34_RS24835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24835
old locus tag: UC34_25080
inference: COORDINATES: protein motif:HMM:NF012257.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEHLYAVHAGTFKTVIMHPDGREQVADYLLPGELLGLSGIADGRHVSEAVALEDSQVCAVQYAELETVCGQVPILRHQLHRLIAGGIVREQKQVLRLGSTRGEARLASFLLDVSTRLAARGFSPQSFFLHLTRGEIGSFLGLKLETVSRMLSRMQAQNALRVRQREITILDAQRLRNMAMASI
SIO_010081: UC34_RS24835
subclass of: SO_0000673
so part of: UC34_RS24835
location: complement(48403..48954)
location: region:48403-48954:-1
so has part: feature:48403-48954:-1:exon

WP_237165380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48403-48954:-1:exon

UC34_RS24840
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24840
old locus tag: UC34_25085
so part of: sequence
location: complement(49332..49985)
location: region:49332-49985:-1
so has part: feature:49332-49985:-1:exon
subclass of: SO_0000010

position:49332:-1
position: 49332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49985:-1
position: 49985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49332-49985:-1:exon

UC34_RS24840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24840
old locus tag: UC34_25085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017234432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MTRIIVADDHTLIRAGLQRILAGIDDLELVGEAANGAQAVTLLERSLCDVLLLDLSMPGRSGIDLISHIKASFPKVAILVLTMHGEEQYAVRALKAGASGYLTKESAPAELVLAVRKVDSGGVYLSPSMAEKIAQDLASAVADGPGYRRLSDREFDVFLMLARGLNLGQIAEVLCVSAKTVSTYKARVLQKLQLTSQAELVPYALRYDLLHDSLWAD
SIO_010081: UC34_RS24840
subclass of: SO_0000673
so part of: UC34_RS24840
location: complement(49332..49985)
location: region:49332-49985:-1
so has part: feature:49332-49985:-1:exon

WP_044458650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49332-49985:-1:exon

UC34_RS24845
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24845
old locus tag: UC34_25090
so part of: sequence
location: complement(50140..50610)
location: region:50140-50610:-1
so has part: feature:50140-50610:-1:exon
subclass of: SO_0000010

position:50140:-1
position: 50140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50610:-1
position: 50610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50140-50610:-1:exon

UC34_RS24845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24845
old locus tag: UC34_25090
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MFKRLLVAIDGSPTSDRALDYALAVAKARAARLRVLFVVDVPLAYVADIDPLPYIEALRAQGEHIRGIASQRLGAEGVNGDVEIRELPPVSGDVAQQINLAAAEFAADAIVVGTHGRRGGRRSALGSVAETCVRQAQRPVILIPAPSEPMRGKPNR
SIO_010081: UC34_RS24845
subclass of: SO_0000673
so part of: UC34_RS24845
location: complement(50140..50610)
location: region:50140-50610:-1
so has part: feature:50140-50610:-1:exon

WP_044458651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50140-50610:-1:exon

UC34_RS24850
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24850
old locus tag: UC34_25095
so part of: sequence
location: complement(50618..51169)
location: region:50618-51169:-1
so has part: feature:50618-51169:-1:exon
subclass of: SO_0000010

position:50618:-1
position: 50618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51169:-1
position: 51169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50618-51169:-1:exon

UC34_RS24850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24850
old locus tag: UC34_25095
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MERIFMESAANAGDGQMPQRILVAMDPSDTAQHALQAAIRFALADDVMRVVHVIDEPLGSYSATQAPWADWQAARERWICEGQKLLSDAYTALQDAGIQADTRSIELRAWGGTVAGAVLREAQRWRADLLVLGTHGRRGARRLLLGSVAEEVLRKSRRPVMLIPEEPGKLIAAMAAAGTLVAR
SIO_010081: UC34_RS24850
subclass of: SO_0000673
so part of: UC34_RS24850
location: complement(50618..51169)
location: region:50618-51169:-1
so has part: feature:50618-51169:-1:exon

WP_052811323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50618-51169:-1:exon

UC34_RS24855
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24855
old locus tag: UC34_25525
so part of: sequence
location: 51851..52138
location: region:51851-52138:1
so has part: feature:51851-52138:1:exon
subclass of: SO_0000010

position:51851:1
position: 51851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52138:1
position: 52138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51851-52138:1:exon

UC34_RS24855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24855
old locus tag: UC34_25525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014724924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1488 domain-containing protein
translation: MEIDFPHFTPVYNADDISIEFLAQVDGKHMLCAISAEALEDHFGATSCNVDELTKAFEANRSVIEQMAAQYLRLCHGTPVLLRSGHFRWATPRPT
SIO_010081: UC34_RS24855
subclass of: SO_0000673
so part of: UC34_RS24855
location: 51851..52138
location: region:51851-52138:1
so has part: feature:51851-52138:1:exon

WP_044458652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51851-52138:1:exon

UC34_RS24860
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24860
old locus tag: UC34_24625
so part of: sequence
location: 52352..53455
location: region:52352-53455:1
so has part: feature:52352-53455:1:exon
subclass of: SO_0000010

position:52352:1
position: 52352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53455:1
position: 53455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52352-53455:1:exon

UC34_RS24860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24860
old locus tag: UC34_24625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006484966.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MCPKWKIRSFPKQPEDPSELYGRGVDIAKSVFQVHYVDQETGEIVNKPIKRAKFLEHFANRAPCLIGMEACGGAHHWARQLTKLGHEVKLMPGEFVKAFNIRNKSDAADAKAIWLAVQQPGKPVAVKTEMQQAMLGLHRMRQQLIKFRTMQINALRGLLTEYGEVMGKSRAKLEKEIPAVLERIAERLPAVLMDTFRAQWNGLEKLDEQIAEIERRMREWKKEDKAVKAISEIPGVGLLTATAAVAMMGDAKAFSSGREFAAWVGIVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVLTHAKEPGEWVEQIQKRRPKNVVIVALANKMARTIWAVLAHDRQYQKGYVSVKPGVDPVKPDTPSH
SIO_010081: UC34_RS24860
subclass of: SO_0000673
so part of: UC34_RS24860
location: 52352..53455
location: region:52352-53455:1
so has part: feature:52352-53455:1:exon

WP_237165381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52352-53455:1:exon

UC34_RS24865
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24865
old locus tag: UC34_24630
so part of: sequence
location: complement(53447..54657)
location: region:53447-54657:-1
so has part: feature:53447-54657:-1:exon
subclass of: SO_0000010

position:53447:-1
position: 53447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54657:-1
position: 54657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53447-54657:-1:exon

UC34_RS24865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24865
old locus tag: UC34_24630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611305.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MEVLTGPERRRRWTAEQKLSMVRESFEPGKSVSMVARHYGVNPNQLFHWRKLYQDGSLSAVKAGEEVVPASELADALKQIRELQRMLGKKTMENEILREAVEYSRGKKMDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRPTDDETVVEEIRRVVGDLPSYGYRRVWGMLRNERVAVGLAPFNAKRIYRVMRTHGLLTQRRPIAPRAHRRHDGKVAVARSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWAATTAGHSGDIVRDVMLAAVENRFGNEVHTPSEIEWLSDNGSGYTADDTRRFAMNIGLKPLTTPVCSPQSNGMAESFVKTMKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV
SIO_010081: UC34_RS24865
subclass of: SO_0000673
so part of: UC34_RS24865
location: complement(join(53447..54342,54342..54657))
location: region:53447-54657:-1
so has part: feature:54342-54657:-1:exon
so has part: feature:53447-54342:-1:exon

WP_157123396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54342-54657:-1:exon

position:54342:-1
position: 54342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53447-54342:-1:exon

UC34_RS24875
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24875
old locus tag: UC34_24640
pseudo: true
so part of: sequence
location: 55051..55576
location: region:55051-55576:1
so has part: feature:55051-55576:1:exon
subclass of: SO_0000010

position:55051:1
position: 55051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55576:1
position: 55576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55051-55576:1:exon

UC34_RS24875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24875
old locus tag: UC34_24640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012430381.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome b
SIO_010081: UC34_RS24875
subclass of: SO_0000673
so part of: UC34_RS24875
location: 55051..55576
location: region:55051-55576:1
so has part: feature:55051-55576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55051-55576:1:exon

UC34_RS24880
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24880
old locus tag: UC34_24645
so part of: sequence
location: 55664..57940
location: region:55664-57940:1
so has part: feature:55664-57940:1:exon
subclass of: SO_0000010

position:55664:1
position: 55664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57940:1
position: 57940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55664-57940:1:exon

UC34_RS24880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24880
old locus tag: UC34_24645
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013698113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MRWLNHSRPTLLLALSVLTLAAGALARHTGAVDLVRYLWGLGVVANGLASAVTMIRSLRRRQLGVDVLALLSMSVALLSGEVLVAAIIALMLASGGALEHFAQSRAHRQMTALLARAPTHATRFEDGQWRQVDLDAIRAGDRLLVRPGDAVPVDGTLVMPAELDESTLTGESATRHRAVPDAVQSGVLNAGASFEMVARASAANSTFSGIVRMVGTALTERSAPARMADRYAVAFVGFTLLLAGASWWMSGDARRGLSVLVVATPCPLLLAVPVAIASGMSRCAMRGILIKEGGALERLAQADTLLIDKTGTLTSGCARLADMECDPRFRPETVLGLAGSLAQASSHTSARAIARAARDQGIALQSPDAVTETAGAGIDGRIGQHVLSIGSACHVLGSAGVPAWSKEFAKRIGYDGASPVFVGVDGALAAVLHLVDSPRPETPRALRLLREAGLRRQAMLTGDSRDAAEAMGALLGITEVHARLSPAEKLAAVRRACADGKVVMVGDGINDAPALAVADVGVSLGAHGAAASAEAADIVLLVDRLDRLVVALGIAHRTRRIALHSVALGIGLSLTAMLAATLGWLPPLAGAVLQEVIDVLAIANALRALTAGANEAAPRLPKSDAQRLIAEHAELAPVMNRVRTTADELAHLRRDQVKCALQALHQALTELVVPHERRDDTQRYPDIARLLGGDDPLAAMSGMHREIFRMVALLGRIIADMPANGPNALTIRQLQRLLYGLDALMRLHCAQEDELYYA
SIO_010081: UC34_RS24880
subclass of: SO_0000673
so part of: UC34_RS24880
location: 55664..57940
location: region:55664-57940:1
so has part: feature:55664-57940:1:exon

WP_044458655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55664-57940:1:exon

UC34_RS24885
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24885
old locus tag: UC34_24650
so part of: sequence
location: 58113..59090
location: region:58113-59090:1
so has part: feature:58113-59090:1:exon
subclass of: SO_0000010

position:58113:1
position: 58113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59090:1
position: 59090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58113-59090:1:exon

UC34_RS24885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24885
old locus tag: UC34_24650
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MEPPSSLLSPQDATERWRRILVAVDPRGASRQAVAYATRLCSASTHVLVLGFFEHPYAYMMPHSRTPADVHAAFDELRHDEASVLSDASGALACTGAKIETRLLGPALGNREIAAAIARVAQAWRADLIVVGAAPAHGIFAALATKVSVALSRYTHCAILIVPAHAGEACSHSPQRILFGIDGSDASLNALRVGMWLAPPYAELLALYIEDRGVDLADVQQFLLEPACRVSRSAKALRRAMALLSKPGKNVRIETRVSHTRLMEDVAQAIVRESRQWGADLIVTGARDRHGMFAWIDGHENERLARAVDRPLLVVHAHGDARTRP
SIO_010081: UC34_RS24885
subclass of: SO_0000673
so part of: UC34_RS24885
location: 58113..59090
location: region:58113-59090:1
so has part: feature:58113-59090:1:exon

WP_084071098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58113-59090:1:exon

UC34_RS24890
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24890
old locus tag: UC34_24655
so part of: sequence
location: complement(59138..59791)
location: region:59138-59791:-1
so has part: feature:59138-59791:-1:exon
subclass of: SO_0000010

position:59138:-1
position: 59138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59791:-1
position: 59791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59138-59791:-1:exon

UC34_RS24890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24890
old locus tag: UC34_24655
inference: COORDINATES: protein motif:HMM:NF016836.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MKTDSQLQRDVMDELARDTSVHASDIGVQVQDGIVTLCGKVASLLEKWEAERIAARVAGARAIVVSLEVSPDTKGQHSDADIARAVLAILKWHAGLPAGSLRVQVEDGWVTLAGEVELYTQRLHAESAIRTLRGVKAVINDIKVKCPPHRAEIVEHIAAALSRQALREARHLEIALLGNGEVLLNGTVHSLAEKEAVRGAAMSTPGVCAVQDRLTVE
SIO_010081: UC34_RS24890
subclass of: SO_0000673
so part of: UC34_RS24890
location: complement(59138..59791)
location: region:59138-59791:-1
so has part: feature:59138-59791:-1:exon

WP_044458657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59138-59791:-1:exon

UC34_RS24895
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24895
old locus tag: UC34_24660
so part of: sequence
location: 60278..60481
location: region:60278-60481:1
so has part: feature:60278-60481:1:exon
subclass of: SO_0000010

position:60278:1
position: 60278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60481:1
position: 60481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60278-60481:1:exon

UC34_RS24895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24895
old locus tag: UC34_24660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017234467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dodecin family protein
translation: MSDVVKVIEILSESPKSWEDAASEALKVAQKSLREVKSLYIKDFSVEVDNGKVVNYRIAAKLSFRLE
SIO_010081: UC34_RS24895
subclass of: SO_0000673
so part of: UC34_RS24895
location: 60278..60481
location: region:60278-60481:1
so has part: feature:60278-60481:1:exon

WP_044458714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60278-60481:1:exon

UC34_RS24900
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: hypE
locus tag: UC34_RS24900
old locus tag: UC34_24665
so part of: sequence
location: complement(60925..61980)
location: region:60925-61980:-1
so has part: feature:60925-61980:-1:exon
subclass of: SO_0000010

position:60925:-1
position: 60925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61980:-1
position: 61980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60925-61980:-1:exon

UC34_RS24900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: hypE
locus tag: UC34_RS24900
old locus tag: UC34_24665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012377295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase expression/formation protein HypE
translation: MSGSSPSVCADAGAHAEPAVIELAHGSGGRLTHALIDEIFRPAFGAAPEDLTHDGATLALEAGSERLAFTTDSYVVRPLFFPGGDIGSLSIHGTVNDLAMCGAEPRYLSVGLVIEEGLRIDVLRSVIASMRAAASASAVRIVTGDTKVVERGKGDGLYVNTTGVGVVRARSPIGPQQVQPGDAVILSGDVGRHGMAILALREGIRFETEIVSDCAPLAAQALGMIDADIEIHCLRDLTRGGLATNLIEIAEIAGATIALDEGAIPISDVVRGACEILGLDPLYVANEGRFAAIVPTEHASAALAHLRRFDSQAAIIGHVDRGAGHARVLLRTLGGTRELDMLNGEQFPRIC
SIO_010081: UC34_RS24900
subclass of: SO_0000673
so part of: UC34_RS24900
location: complement(60925..61980)
location: region:60925-61980:-1
so has part: feature:60925-61980:-1:exon

WP_044458658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60925-61980:-1:exon

UC34_RS24905
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: hypD
locus tag: UC34_RS24905
old locus tag: UC34_24670
so part of: sequence
location: complement(61977..63122)
location: region:61977-63122:-1
so has part: feature:61977-63122:-1:exon
subclass of: SO_0000010

position:61977:-1
position: 61977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63122:-1
position: 63122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61977-63122:-1:exon

UC34_RS24905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: hypD
locus tag: UC34_RS24905
old locus tag: UC34_24670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014068053.1
GO function: GO:0016530 - metallochaperone activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase formation protein HypD
translation: MKHLDAWRDMEAAQSYARAIAAITTRAWTIMEICGSQTHSIVRYGIDRMMPDGVTLLHGPGCPVCVTPAAIIDAAIAIAKRREVTLCSFGDMLRVPGEHGSLLNARAAGADVRFVYSPLDALRIARNEPHRCVVFLAIGFETTAPATAMAVLQAEREGLENFFLLVAHVRVPPALEAILSDAASGVQGILAAGHVCTVMGYREYEAIAQRFHVPVVVTGFEPIDLLQGIYLCIKQLETRRAEVENPYYRAVHPEGNRAAQAAMMKVFAVRARAWRGLGEIAESGLGFAPAYHRFDALARFTSGIMPADCPTECIAAELLRARKRPADCPAFGTRCTPEHPLGPTMVSSEGVCAAYYRYRRTQTVRERSTVSAPNGGEQGAV
SIO_010081: UC34_RS24905
subclass of: SO_0000673
so part of: UC34_RS24905
location: complement(61977..63122)
location: region:61977-63122:-1
so has part: feature:61977-63122:-1:exon

WP_044458659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61977-63122:-1:exon

UC34_RS24910
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24910
old locus tag: UC34_24675
so part of: sequence
location: complement(63119..63361)
location: region:63119-63361:-1
so has part: feature:63119-63361:-1:exon
subclass of: SO_0000010

position:63119:-1
position: 63119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63361:-1
position: 63361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63119-63361:-1:exon

UC34_RS24910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24910
old locus tag: UC34_24675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018175937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HypC/HybG/HupF family hydrogenase formation chaperone
translation: MCLAIPGELLSVDDDDPLTRQGRVAFGGVVMPVNLAYVPKARPGDYVLVHAGFAIAVIDERQAEQTLAYLTDQKLPGGAV
SIO_010081: UC34_RS24910
subclass of: SO_0000673
so part of: UC34_RS24910
location: complement(63119..63361)
location: region:63119-63361:-1
so has part: feature:63119-63361:-1:exon

WP_044458660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63119-63361:-1:exon

UC34_RS24915
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: hypF
locus tag: UC34_RS24915
old locus tag: UC34_24680
so part of: sequence
location: complement(63361..65619)
location: region:63361-65619:-1
so has part: feature:63361-65619:-1:exon
subclass of: SO_0000010

position:65619:-1
position: 65619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63361-65619:-1:exon

UC34_RS24915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: hypF
locus tag: UC34_RS24915
old locus tag: UC34_24680
EC number: 6.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012845076.1
GO function: GO:0003998 - acylphosphatase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyltransferase HypF
translation: MQGVGFRPFVHRLAVSEELSGFVRNTAHGVEVEVEGALQALERFSLRLETETVAPAAVSGRRINEITPRGGREFMIAPSVPGMGELGVVLPDMAICEQCVAEIFDASNRRYRYPFTTCAQCGPRFSIMEGVPFDRERTTMRGFAMCAACQAEYDNPSSRRFHAQTNACPACGPQLTLLNAAGRECAIGYDAVRRAGDAIRSGSILAMKGLGGYQLLVDAGNDHAVRRLRERKHRPSKPFAIMAPCYEDAQTLAVISDEERRTLCSTAAPIVILRARGEGIAPSVAPANAWLGLMLPYTPLHHLLMHELGFAVVATSGNRGGEPIVADNLEAIEQLADVADGFLVHDRPIANPVDDSVARVIAGEATVLRHARGYAPLALRLPGHQTRDDAGTCLALGGHGKSAIALMSGSHVVLGPYIGDLEGAGARTAFARTVAAMTSLFSAEPRSAACDAHPDYWSSRFARHSLVTNIQHVPHHLAHVLACMVENNLEGPLLGVAWDGSGYGGDGTIWGGEFLWVQGNRYRQVGQLQPFRLPGGEVAAREVNRAAIGALFAVYGDVALTMTELRPIAHLSASEQQIYKTLLSGGFRSPWTSSAGRLFDAAAAMLGICATSSFEGEAAIALESAAANGESEHVLAAAMLREEQGRWIADWRPTLAALASASQRHEAPAALAAAFHDALAQVIVNVAERVGVGRVLLTGGCFQNARLTGGAVARLRAAGFDVWQHRRIPPNDGGLAVGQAAFAAQPMLEGPR
SIO_010081: UC34_RS24915
subclass of: SO_0000673
so part of: UC34_RS24915
location: complement(63361..65619)
location: region:63361-65619:-1
so has part: feature:63361-65619:-1:exon

WP_237165374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63361-65619:-1:exon

UC34_RS24920
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24920
old locus tag: UC34_24685
so part of: sequence
location: complement(65691..65957)
location: region:65691-65957:-1
so has part: feature:65691-65957:-1:exon
subclass of: SO_0000010

position:65691:-1
position: 65691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65957:-1
position: 65957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65691-65957:-1:exon

UC34_RS24920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24920
old locus tag: UC34_24685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017774735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase maturation nickel metallochaperone HypA
translation: MRELVERIVLAARGAGARRIRGAQVWIGALAPFSPEHFREHFEKEARGTPVEATRLHIECSDDMLHDQAQYVMLQWLDLELPDDSEGT
SIO_010081: UC34_RS24920
subclass of: SO_0000673
so part of: UC34_RS24920
location: complement(65691..65957)
location: region:65691-65957:-1
so has part: feature:65691-65957:-1:exon

WP_237165375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65691-65957:-1:exon

UC34_RS24925
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24925
old locus tag: UC34_24690
so part of: sequence
location: complement(65968..66483)
location: region:65968-66483:-1
so has part: feature:65968-66483:-1:exon
subclass of: SO_0000010

position:65968:-1
position: 65968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66483:-1
position: 66483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65968-66483:-1:exon

UC34_RS24925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24925
old locus tag: UC34_24690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017774734.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase maturation protease
translation: MSRSKRSCVSQKVRIIGVGNPDRADDGVGCLVARKLVGRLPPDVSIRTHGGDALTLIDEMRGIDALICIDASVARGSPGRVRLLDLANDRLGSAVTFVSAHSLGLAEAIALAQALGIASRTIFVYAIEGASFELGRPLSAEVDAAAHTVVERVAAQACRLRDDPCKGAGDA
SIO_010081: UC34_RS24925
subclass of: SO_0000673
so part of: UC34_RS24925
location: complement(65968..66483)
location: region:65968-66483:-1
so has part: feature:65968-66483:-1:exon

WP_044458663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65968-66483:-1:exon

UC34_RS24930
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24930
old locus tag: UC34_24695
pseudo: true
so part of: sequence
location: complement(66480..67774)
location: region:66480-67774:-1
so has part: feature:66480-67774:-1:exon
subclass of: SO_0000010

position:66480:-1
position: 66480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67774:-1
position: 67774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66480-67774:-1:exon

UC34_RS24930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24930
old locus tag: UC34_24695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014433201.1
GO function: GO:0016151 - nickel cation binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nickel-dependent hydrogenase large subunit
SIO_010081: UC34_RS24930
subclass of: SO_0000673
so part of: UC34_RS24930
location: complement(66480..67774)
location: region:66480-67774:-1
so has part: feature:66480-67774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66480-67774:-1:exon

UC34_RS24935
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24935
old locus tag: UC34_24700
so part of: sequence
location: complement(67764..68540)
location: region:67764-68540:-1
so has part: feature:67764-68540:-1:exon
subclass of: SO_0000010

position:67764:-1
position: 67764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68540:-1
position: 68540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67764-68540:-1:exon

UC34_RS24935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24935
old locus tag: UC34_24700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012699123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidoreductase
translation: MRKIHRPRLAVWKFASCDGCQLSLLDCEDELLDIASALEIVNFPEASSDVRPGPYDLSLVEGSITTEHDAQRIRQVRRQSRHLVTIGACATAGGIQALRNFSDIDAMVGAVYAKPEYIKTLATSTPISAHVNVDYELRGCPINTRQLVEVISAFLAGRKPAIAAHSVCIECKHRAHVCVMVQGTPCLGPVTHAGCGALCPQFRRGCYGCYGPSETPNTAALAREWQALGAAPRTIAHAFRSFNAAAEPFKSEADAHGD
SIO_010081: UC34_RS24935
subclass of: SO_0000673
so part of: UC34_RS24935
location: complement(67764..68540)
location: region:67764-68540:-1
so has part: feature:67764-68540:-1:exon

WP_044458664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67764-68540:-1:exon

UC34_RS24940
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24940
old locus tag: UC34_24705
so part of: sequence
location: complement(68542..69396)
location: region:68542-69396:-1
so has part: feature:68542-69396:-1:exon
subclass of: SO_0000010

position:68542:-1
position: 68542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69396:-1
position: 69396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68542-69396:-1:exon

UC34_RS24940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24940
old locus tag: UC34_24705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014068047.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD/NAD(P)-binding protein
translation: MGNANVTADAPGPGQTPQRYDVVRRQREFANTVTLALKPHAGVRPTFTPGQFNMLYAFGVGEAAVSVSGDPADANTFIHTIRDVGAVSGALARLAVGASVGVRGPFGRGWPMQAAIGTDVLIIAGGLGLAPLRPAILDIFAHRRRYGRVSILFGCRHPKEMLFCRELRRWSRRVNVDVQVTVDHADIGWHAHVGVVPTLIARVALDTRATTVFVCGPEVMMRFSINALQDRGLPARRIYLSMERNMKCAIGLCGHCQFASAFVCKDGPVMCYEKIADMLAVPEI
SIO_010081: UC34_RS24940
subclass of: SO_0000673
so part of: UC34_RS24940
location: complement(68542..69396)
location: region:68542-69396:-1
so has part: feature:68542-69396:-1:exon

WP_044458665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68542-69396:-1:exon

UC34_RS24945
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24945
old locus tag: UC34_24710
so part of: sequence
location: complement(69383..69841)
location: region:69383-69841:-1
so has part: feature:69383-69841:-1:exon
subclass of: SO_0000010

position:69383:-1
position: 69383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69841:-1
position: 69841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69383-69841:-1:exon

UC34_RS24945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24945
old locus tag: UC34_24710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017774730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic nucleotide-binding domain-containing protein
translation: METLEHILAAHPFCSGLAPERLRLLYGCARNCRFDAGQCLHRACEGADKFFLIRHGRVALEIAEPGGTPFMFATLEEGEIVFAGEPMSPCSWLFDARAIEPTQAISIDTACLRGKCERDYRLGYEMMSRFLPILAKRLHAARLQLLDVYGKR
SIO_010081: UC34_RS24945
subclass of: SO_0000673
so part of: UC34_RS24945
location: complement(69383..69841)
location: region:69383-69841:-1
so has part: feature:69383-69841:-1:exon

WP_044458666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69383-69841:-1:exon

UC34_RS24950
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24950
old locus tag: UC34_24715
so part of: sequence
location: complement(69828..70994)
location: region:69828-70994:-1
so has part: feature:69828-70994:-1:exon
subclass of: SO_0000010

position:69828:-1
position: 69828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70994:-1
position: 70994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69828-70994:-1:exon

UC34_RS24950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24950
old locus tag: UC34_24715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016920199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MLTEHSPIVERSIIDAPTGIQAVIDVLSRDGYRVLGPTLKDDAIVYGDVSRVTDLPIGWTDIQAPGRYQLKRRCDRALFGFAVGPHSWKHFLYPPNARVFSARKTRDGVIFTPVDEAPGKLALLGVRACELNAIQVHDRVLHDGPFADPSYASRRRQMFVVAVNCSHAGGTCFCVSLACGPAVEAGFDLALTELTPAFRDAILVEAGSEAGIAVLAQIARQSATQEHVAAAHAVVQQTATQMGRTMQTEGIKELLQNNPHLPRWKTVADRCLTCGNCTMVCPTCFCTTVEDHSDISGENAERIRSWDSCFTLDFSYLHGGSVRSSASSRYRQWLTHKLANWIDQFGTSGCVGCGRCITWCPVGIDITEEVAALKAEFEAASAQGDGDA
SIO_010081: UC34_RS24950
subclass of: SO_0000673
so part of: UC34_RS24950
location: complement(69828..70994)
location: region:69828-70994:-1
so has part: feature:69828-70994:-1:exon

WP_044458667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69828-70994:-1:exon

UC34_RS24955
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24955
old locus tag: UC34_24720
pseudo: true
so part of: sequence
location: complement(71249..71966)
location: region:71249-71966:-1
so has part: feature:71249-71966:-1:exon
subclass of: SO_0000010

position:71249:-1
position: 71249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71966:-1
position: 71966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71249-71966:-1:exon

UC34_RS24955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24955
old locus tag: UC34_24720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007735681.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: UC34_RS24955
subclass of: SO_0000673
so part of: UC34_RS24955
location: complement(71249..71966)
location: region:71249-71966:-1
so has part: feature:71249-71966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71249-71966:-1:exon

UC34_RS24960
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24960
old locus tag: UC34_24725
so part of: sequence
location: complement(72679..74493)
location: region:72679-74493:-1
so has part: feature:72679-74493:-1:exon
subclass of: SO_0000010

position:72679:-1
position: 72679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74493:-1
position: 74493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72679-74493:-1:exon

UC34_RS24960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24960
old locus tag: UC34_24725
inference: COORDINATES: protein motif:HMM:NF026288.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNAAHEGLQASALTIFPPETFDGVDPEGVGRALASLILCDFAAQRNQTTQWIEPDRDEALRTLAVRLTPTGQEALLQSLENSQGDNAFSKYFAHADSQYFAQADAYCLAGHLYFQRAGTPLLAGSIDRTPEDASAQAAGDYLKAADLFTRAGQPDLAAEAYLGAADAYRGSFQPLKAAEVCLRAADLYTQTSQPLKAADARLKAAAAYLTAANGYLLAGAPGVAGDAYLRAADLYMQTHQPMKAVDICQKAADAYRGAGEPGQAAVAHLWAAHAVRADADARPEKGRYAQAAAAYVRAAQAYTDVEQPGPAADAWLWAALASTRAREPRKALAAYQQAAEANTKAGRHGLAGDVWRSVADLYTELGDPKLASDANDNAATVYRWAAIGGTEVRQPLPAAHYYLMAAEAHAAVAQHARDENAKDVEQEHKELAEEAYEWAGDAFMGDGLPAAATHAYMLAGQYARAIVPCAQAARHYLAADELLQAADAYTQLGFALRAAGEPTDKGNKAFLTAAGLYQRERAYLAAAVAYAEGGDFLQAAPLFERVNRPAPAGHAYLQSKMFPQAARAFWRANRLEPDAERRERLRLLAESTSEQAVLFDRNL
SIO_010081: UC34_RS24960
subclass of: SO_0000673
so part of: UC34_RS24960
location: complement(72679..74493)
location: region:72679-74493:-1
so has part: feature:72679-74493:-1:exon

WP_167370706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72679-74493:-1:exon

UC34_RS24965
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24965
old locus tag: UC34_24730
so part of: sequence
location: 75425..76894
location: region:75425-76894:1
so has part: feature:75425-76894:1:exon
subclass of: SO_0000010

position:75425:1
position: 75425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76894:1
position: 76894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75425-76894:1:exon

UC34_RS24965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24965
old locus tag: UC34_24730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001686642.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Eco57I restriction-modification methylase domain-containing protein
translation: MLQQLDTADRVRRDVAPCIAQRRKSALGQFMTPASVARFMASLFPPSTLQTCRLLDAGAGVGALSCAFLDRWLAGGFGFEAVEATAYEVDATLRAHLSQHLRSYSQVKAEVLAEDYIERAAAEGLLDKGYTHAILNPPYKKINSRSAHRLALRSIGIETVNLYSAFVALAVAQAAPGGQIVAILPRSFCNGPYYRPFRHFIFARAAICHMHLFGARNKAFKDDEVLQENVIIRLERGGHQGPVTITTSSDDSFTDLVTHEHPFERIVFPDDPERFIHVPTTAAKSAIELSSAVRYSLADLGLKVSTGPVVDFRVKAHLRDMPEAGTAPLIYPGHLRSAGTVWPVPGLKKPNAIVRCAETEKWLYPNGFYCLVRRFSSKEEKRRVVASVVDPATFGEHTRLGFENHVNLIHENKRGLPELLARGLAVFLNSTAVDESFRRFNGHTQVNATDLKLMKYPNREALIGLGTWARQHSEITQEMIDEQLAKLTA
SIO_010081: UC34_RS24965
subclass of: SO_0000673
so part of: UC34_RS24965
location: 75425..76894
location: region:75425-76894:1
so has part: feature:75425-76894:1:exon

WP_044458669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75425-76894:1:exon

UC34_RS24970
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24970
old locus tag: UC34_24735
so part of: sequence
location: 76891..77847
location: region:76891-77847:1
so has part: feature:76891-77847:1:exon
subclass of: SO_0000010

position:76891:1
position: 76891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77847:1
position: 77847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76891-77847:1:exon

UC34_RS24970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24970
old locus tag: UC34_24735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490780.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BsuBI/PstI family type II restriction endonuclease
translation: MTDKKNDYIEAAHQIIISLGLPRAQQNERSALALLALLNLTPDKRWADAGNPLVGITPIMDWAREHYGKIYAPNTRETFRRQTMHQFCDAGVALYNPDKPDRAVNSPKAVYQIEPAALKLLRSFGSEQWHDNLTAYLAERETLVAKYAKARTQTRIPVEVAPGQAITLSPGEHSELIRAIIEDFAPRFAPGSVLVYAGDTGDKWGYFDAALLAELGVNVDAHGKMPDVVLHFTEKNWLLLVESVTSHGPVDGKRHAELARLFADSKAGLVFVTAFPNRSVMGRYLGDIAWETEVWVADAPSHLIHFNGVRFLGPYASE
SIO_010081: UC34_RS24970
subclass of: SO_0000673
so part of: UC34_RS24970
location: 76891..77847
location: region:76891-77847:1
so has part: feature:76891-77847:1:exon

WP_044458670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76891-77847:1:exon

UC34_RS25580
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25580
so part of: sequence
location: complement(78136..79476)
location: region:78136-79476:-1
so has part: feature:78136-79476:-1:exon
subclass of: SO_0000010

position:78136:-1
position: 78136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79476:-1
position: 79476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78136-79476:-1:exon

UC34_RS25580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014252906.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDAAMVIARHCVAGEGLLHASKKETPLESDNTNLPWVILRAVHRASRLDGIPARARAVLAALARTVDAKKPYGEIYARRELLSERAMQSERTFYRSLTDLEAAGLIERPAQRRYVSHGLFGRAYLHLSARAAILLGLIELGEASVQAHKPQTSENAAASPAPADVPPQAAPCFHVRSANVADGAITKDLSPTSLQKRQPGQLPHDLERLRPLGFHDYLIFRLMREAREQGKRLSEVVEATWPHLAKAARPINYLRKLLASPVDFGYALRAKAAEKVRAEVVAAEARSAEAFVRAALGKVFVDAAGLRQCVVDDGGRTLAITDLAEGVVRRSVANWQVAFMRSVKQGTLRVVGAHELAQLRGAAIAQRERAAKCQTESVVPHAPNQFASRELFQSASDLSPPPVARAHQVHPLLQKNDAARSLTSAAADALAALRTMRKLAARCPV
SIO_010081: UC34_RS25580
subclass of: SO_0000673
so part of: UC34_RS25580
location: complement(78136..79476)
location: region:78136-79476:-1
so has part: feature:78136-79476:-1:exon

WP_157123393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78136-79476:-1:exon

UC34_RS24985
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24985
old locus tag: UC34_24745
so part of: sequence
location: complement(79732..80775)
location: region:79732-80775:-1
so has part: feature:79732-80775:-1:exon
subclass of: SO_0000010

position:79732:-1
position: 79732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80775:-1
position: 80775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79732-80775:-1:exon

UC34_RS24985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24985
old locus tag: UC34_24745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MASKFEERMRAKTGGSVQKAQTTVADRRETAANRPLATMPAQLGAFRLEAQEYQRKIAALEAELEQATRDGNSGIDIPLNKLHEVPGRRRYMSAQDYRDLRENLRVNELNQPIVVDIRADGEFELVSGHHRSDAYRELERPTIRGVLRKNTIENPTVAAFYANLFQAPLTDFEKYLGFTELQNQFPGITQAQIAERSGKPESTISYLMAFRDLPAPVLEMLRASPTLLGSDAATTFAKLTRAGKGESVIAAIEQLARGDVDQKRAVALAEAGSAPQPAARPIAEIVKIKAGRSNYCQIRRTAKVVRLDFQSEVEAQAVMKVVQEVLERRTQTSKSGAEGTGHAEAEK
SIO_010081: UC34_RS24985
subclass of: SO_0000673
so part of: UC34_RS24985
location: complement(79732..80775)
location: region:79732-80775:-1
so has part: feature:79732-80775:-1:exon

WP_044458671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79732-80775:-1:exon

UC34_RS24990
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24990
old locus tag: UC34_24750
so part of: sequence
location: complement(80779..82035)
location: region:80779-82035:-1
so has part: feature:80779-82035:-1:exon
subclass of: SO_0000010

position:80779:-1
position: 80779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82035:-1
position: 82035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80779-82035:-1:exon

UC34_RS24990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24990
old locus tag: UC34_24750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013691838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNLGNGETAMVLKEPTRRRRRIDLAQLVAIADRAEAALAQLRDDLVEPFPRKVAPMVTGSRLAKICKIDRTRVQYLCTRGNTNGEYPVGHVVGNNRSREFSLADAQQFIRLVGTYMRRPEGVPGVAIAVGNFKGGVGKTTTAVGIAQGLTLRGHRVLLVDLDPQASSTTLMGYVPTAEVTEEMTVMPFVYGDKPDLSESIIPSYWNNLDLLLASPSLFGADYFLPSKQSKHPDFEYWSVLEGAMPALRAQYDVIVFDTPPSLAYLATNCFLSADGIVVPLPPETLDYASSVAFFRQFADLFQSLASERDVKKTFGFIKIFLSKVRKDIPSTNIVSAWIQETYPELLGRTELFESNVVKKAMAEFKTLYDLESRTYEGGAALFNRTVDAFDSMVDEIEEQIEDIWTEALQSQDFRLESE
SIO_010081: UC34_RS24990
subclass of: SO_0000673
so part of: UC34_RS24990
location: complement(80779..82035)
location: region:80779-82035:-1
so has part: feature:80779-82035:-1:exon

WP_237165376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80779-82035:-1:exon

UC34_RS24995
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS24995
old locus tag: UC34_24755
so part of: sequence
location: 82397..83572
location: region:82397-83572:1
so has part: feature:82397-83572:1:exon
subclass of: SO_0000010

position:82397:1
position: 82397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83572:1
position: 83572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82397-83572:1:exon

UC34_RS24995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS24995
old locus tag: UC34_24755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010316356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MDPVRNPFSPGAGSQPPELAGRKTIIEDARIAIERVLLDKPGRSQMFLGLRGVGKTVLLNAVEKLATERGHITSMIEAPENKSLGEQLLPRMHQVLRKLSVVANGKAKAHEALRALRSFASAFKLQYGDLSIAVDPEAGVADSGALENDLPELFVRIGEAAKAAGKAWTLLIDEVQYLNERDLAALIVSLHKTNQAGLPVLFFGAGLPQVAALSGEAKSYAERLFLYPEVGALPERDAKDAIRQPVNDEGADIDEDALSEIFLKTKGYPYFLQEWGHQSWNLAGGERITIDDARQAETTTLKRLDEGFFKVRFDRLTPKEREYVIAMAQLGEGPYRSSDVADALGETPQSLGPRRAQIISKGMIYSPSHGDIAFTVPMFNEYLMRNLSSLD
SIO_010081: UC34_RS24995
subclass of: SO_0000673
so part of: UC34_RS24995
location: 82397..83572
location: region:82397-83572:1
so has part: feature:82397-83572:1:exon

WP_044458673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82397-83572:1:exon

UC34_RS25000
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25000
old locus tag: UC34_24760
so part of: sequence
location: complement(83860..84153)
location: region:83860-84153:-1
so has part: feature:83860-84153:-1:exon
subclass of: SO_0000010

position:83860:-1
position: 83860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84153:-1
position: 84153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83860-84153:-1:exon

UC34_RS25000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25000
old locus tag: UC34_24760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018990404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MPQVIVTEGAAQGLERCRRFLAVKAPDAAKRAGQAIERQFLLLETAPDIGRPFPEMPELRELVIAFGDSGYVAVYRHEAAADAVYILAFRHQKEAGC
SIO_010081: UC34_RS25000
subclass of: SO_0000673
so part of: UC34_RS25000
location: complement(83860..84153)
location: region:83860-84153:-1
so has part: feature:83860-84153:-1:exon

WP_044458674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83860-84153:-1:exon

UC34_RS25005
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25005
old locus tag: UC34_24765
so part of: sequence
location: complement(84141..84413)
location: region:84141-84413:-1
so has part: feature:84141-84413:-1:exon
subclass of: SO_0000010

position:84141:-1
position: 84141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84413:-1
position: 84413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84141-84413:-1:exon

UC34_RS25005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25005
old locus tag: UC34_24765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019564015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MATSLKIDDSLKGRVHQLATQRRRSPHWIMLEAIQQYVEREEARESFKQEALASWAAYQETGRHLTGQEVRTWLNTWGTEHETTVPECHK
SIO_010081: UC34_RS25005
subclass of: SO_0000673
so part of: UC34_RS25005
location: complement(84141..84413)
location: region:84141-84413:-1
so has part: feature:84141-84413:-1:exon

WP_044458675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84141-84413:-1:exon

UC34_RS25010
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25010
old locus tag: UC34_24770
pseudo: true
so part of: sequence
location: 84579..85151
location: region:84579-85151:1
so has part: feature:84579-85151:1:exon
subclass of: SO_0000010

position:84579:1
position: 84579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85151:1
position: 85151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84579-85151:1:exon

UC34_RS25010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25010
old locus tag: UC34_24770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: UC34_RS25010
subclass of: SO_0000673
so part of: UC34_RS25010
location: 84579..85151
location: region:84579-85151:1
so has part: feature:84579-85151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84579-85151:1:exon

UC34_RS25015
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: argP
locus tag: UC34_RS25015
old locus tag: UC34_24775
so part of: sequence
location: complement(85290..86189)
location: region:85290-86189:-1
so has part: feature:85290-86189:-1:exon
subclass of: SO_0000010

position:85290:-1
position: 85290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86189:-1
position: 86189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85290-86189:-1:exon

UC34_RS25015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: argP
locus tag: UC34_RS25015
old locus tag: UC34_24775
inference: COORDINATES: protein motif:HMM:NF009888.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional regulator ArgP
translation: MFDREKLEAFASVARHKSFEEAASYLRLTRGAVSQRVRALEESLSCVLLIRSRPMVLTEDGCHLLRHIQALELLEAETLLTVSGERRDDMPIRVALGVNADSLATWFRPVLTELTTKNWVALEVVVDDQAHTAALLQRGEVMGCISVDSSSQKGFVSESIGAMRYRCVAKRSLVEHRFKDGFDMPSVLKTNAILFNRKDELHEMFLANHFGFAVNSFPRHYVPSAEMLYNMIREGIGYGLVPEVQSRTAIDSGELVDLAPNCPLDMQLFWHRWEVEPAICEAITATVRKHALQMLVQKV
SIO_010081: UC34_RS25015
subclass of: SO_0000673
so part of: UC34_RS25015
location: complement(85290..86189)
location: region:85290-86189:-1
so has part: feature:85290-86189:-1:exon

WP_044458676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85290-86189:-1:exon

UC34_RS25020
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25020
old locus tag: UC34_24780
so part of: sequence
location: complement(86339..87400)
location: region:86339-87400:-1
so has part: feature:86339-87400:-1:exon
subclass of: SO_0000010

position:86339:-1
position: 86339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87400:-1
position: 87400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86339-87400:-1:exon

UC34_RS25020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25020
old locus tag: UC34_24780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIVWMTGVLAAQILGGSAVLSLLGVPHRIAVLVVTGAILIASQVGLKGLSAIFSTCLVSANIIIFYALVQARGLPVYLHSIPRFGHDVAQLPMIDSLTITFSILFVVVTGADYQQFVIAARRPLDAVVGSVIAGVALIATGFLPAAAVIAWAGAGYLSRLRDKAGVIPYIVASAVSHAGSAVSILALLAMLAAALGSGGAISRAIAAGLASVFAGPGTILGRASGLIWGRTRQIVFSFLGLTLALIVAMRGQAIVQAIVGLNIVYISSVGLLLFVQMSSRRPTLRVALATMIGGFVSSTIVYVCGIFRILTDHVDAISLATGLLFAAIPLLIAQIKPSPNTELQKTGAGTGR
SIO_010081: UC34_RS25020
subclass of: SO_0000673
so part of: UC34_RS25020
location: complement(86339..87400)
location: region:86339-87400:-1
so has part: feature:86339-87400:-1:exon

WP_157123394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86339-87400:-1:exon

UC34_RS25025
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: istB
locus tag: UC34_RS25025
old locus tag: UC34_24785
so part of: sequence
location: complement(87616..88437)
location: region:87616-88437:-1
so has part: feature:87616-88437:-1:exon
subclass of: SO_0000010

position:87616:-1
position: 87616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88437:-1
position: 88437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87616-88437:-1:exon

UC34_RS25025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: istB
locus tag: UC34_RS25025
old locus tag: UC34_24785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012354406.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MNAPAHDNGRLALMLNELRLPTIGRLWPEFVERSDKEGWPATRLLGALLEHELAERAKRRIERHRTESHLDPTKTLATFDFGMVPMVSKAHVTALATGESWLEKGATILLFGPPGGGKSHLGSALGHALIDAGYRVLFTRTAELVQKLQAARQSLQLPSALAKLDRFDLIILDDLSYARKDQAETSVLFELIAERYERKSLLITANQPFSGWNDVFPDPGMTIAAIDRLVHHSTIFELNVESYRRRKASDKQSARRRQLPNDNCEGGTTTMAS
SIO_010081: UC34_RS25025
subclass of: SO_0000673
so part of: UC34_RS25025
location: complement(87616..88437)
location: region:87616-88437:-1
so has part: feature:87616-88437:-1:exon

WP_044453167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87616-88437:-1:exon

UC34_RS25030
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
gene: istA
locus tag: UC34_RS25030
old locus tag: UC34_24790
so part of: sequence
location: complement(88434..89927)
location: region:88434-89927:-1
so has part: feature:88434-89927:-1:exon
subclass of: SO_0000010

position:88434:-1
position: 88434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89927:-1
position: 89927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88434-89927:-1:exon

UC34_RS25030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
gene: istA
locus tag: UC34_RS25030
old locus tag: UC34_24790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612300.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSGTRITDQQVRLYMNKRKHHPQEVAAAKTGISVRTARRIERDATLPSQKPRHSWRTRPDPFVDVWDREVVPLLRNSPHLMGITVLRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPTQEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFVLAFSRWEYANVVEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQEDFTARYAALLDHYGMNGTRNNRGLGHENGSVESSHRYLKEALEQALMLRGHRDFADRPAYDEFVREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFVEEEARVTRCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGALVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFRDALFPREAYRRTWERLEAQLTQRQACKTMVGLLELAGHHGVEALLAERLDALLAAGELPDLKQLCNEFAPRQALCPEVVVEMPPVALYDELLDKVAA
SIO_010081: UC34_RS25030
subclass of: SO_0000673
so part of: UC34_RS25030
location: complement(88434..89927)
location: region:88434-89927:-1
so has part: feature:88434-89927:-1:exon

WP_044458677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88434-89927:-1:exon

UC34_RS25585
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25585
old locus tag: UC34_24795
so part of: sequence
location: complement(90012..90203)
location: region:90012-90203:-1
so has part: feature:90012-90203:-1:exon
subclass of: SO_0000010

position:90012:-1
position: 90012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90203:-1
position: 90203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90012-90203:-1:exon

UC34_RS25585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25585
old locus tag: UC34_24795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPERSLGAVRVAVLLISASCGVGFLFGSGEMALSAAMAGMGGDNYLGRSLTIVLAGGEALEAA
SIO_010081: UC34_RS25585
subclass of: SO_0000673
so part of: UC34_RS25585
location: complement(90012..90203)
location: region:90012-90203:-1
so has part: feature:90012-90203:-1:exon

WP_044458678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90012-90203:-1:exon

UC34_RS25035
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25035
old locus tag: UC34_24800
so part of: sequence
location: complement(90219..91127)
location: region:90219-91127:-1
so has part: feature:90219-91127:-1:exon
subclass of: SO_0000010

position:90219:-1
position: 90219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91127:-1
position: 91127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90219-91127:-1:exon

UC34_RS25035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25035
old locus tag: UC34_24800
EC number: 1.14.19.-
inference: COORDINATES: protein motif:HMM:NF012699.2
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid desaturase
translation: MEQEGISLADLTGKCGWRPAVDIALDWILILLSVVAVQHFYTNFCFVLALLVIGNRQRALGNLLHEAAHGNLVPGRLRNDVLAYALLAPATYSSLAAYRRMHARHHGMVGDQHLDPDHINIGGTWRRHWTLAYFRVVFSIDRWSGSLLGDLRQWHQRPFTVFAILCWWAVVSLALFIICGSRYIELFAVLWWLSRATIFHAITSFREMCDHYGLPYGGIFSVTRDLSLDDRWVAGLAILIHPHNNGYHLTHHLLPNVPYYNLPRASTAIGVLPVYRAEAHRCSSYTRGNRAMIREWADTADA
SIO_010081: UC34_RS25035
subclass of: SO_0000673
so part of: UC34_RS25035
location: complement(90219..91127)
location: region:90219-91127:-1
so has part: feature:90219-91127:-1:exon

WP_044458679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90219-91127:-1:exon

UC34_RS25040
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25040
so part of: sequence
location: 91423..91854
location: region:91423-91854:1
so has part: feature:91423-91854:1:exon
subclass of: SO_0000010

position:91423:1
position: 91423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91854:1
position: 91854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91423-91854:1:exon

UC34_RS25040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25040
inference: COORDINATES: protein motif:HMM:NF021514.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACT domain-containing protein
translation: MKPTLINPVRELPKLLRFMRPELSSKRYAFASLPPEADLSTVSPLCCFAEQEGVSVIVEYAQAIAANIPCHRQIYRMIVLTVYSDLNSVGFLAAISQALANEDVPCNVVSAHFHDYLFVPDELANNAIQCLENLSKSIRFADT
SIO_010081: UC34_RS25040
subclass of: SO_0000673
so part of: UC34_RS25040
location: 91423..91854
location: region:91423-91854:1
so has part: feature:91423-91854:1:exon

WP_157123395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91423-91854:1:exon

UC34_RS25985
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25985
pseudo: true
so part of: sequence
location: complement(<92208..>92591)
location: region:92208-92591:-1
so has part: feature:92208-92591:-1:exon
subclass of: SO_0000010

position:92208:-1
position: 92208
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:92591:-1
position: 92591
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92208-92591:-1:exon

UC34_RS25985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011003443.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS701 family transposase
SIO_010081: UC34_RS25985
subclass of: SO_0000673
so part of: UC34_RS25985
location: complement(<92208..>92591)
location: region:92208-92591:-1
so has part: feature:92208-92591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92208-92591:-1:exon

UC34_RS25045
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25045
old locus tag: UC34_24805
so part of: sequence
location: complement(92745..93851)
location: region:92745-93851:-1
so has part: feature:92745-93851:-1:exon
subclass of: SO_0000010

position:92745:-1
position: 92745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93851:-1
position: 93851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92745-93851:-1:exon

UC34_RS25045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25045
old locus tag: UC34_24805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012405348.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRGADSYTESMFTVTTLDNFVPANHPLRPIRNWLNDALKRMDPVFRRMYESDAKGGRPSIAPEKLIRALLLQVLYSIRSERMLMEQISYNMLFRWFVGLAMDDAVWDHSTFSKNRERLLVHDVIVSLFNETVETAHARGHLSGEHFSVDGTLIQAWAGHKSFVRKDKSDDDTPPEGGSRQRENWHGEKRSNETHESSTDSEARLFRKSRGTGAVLCYLGHVLTDNRHGLVVNAQVTQASGTAERDAATHMLADAAFLADSPITVGADKNYDTAGFVASCRENRVTPHVAQNDGRAGGSAIDGRTTRWPGYAISQRKRKCIEQVFGWGKTVGRIRQAMYRGRERIEQLFVLTQAAYNLTRMRTLAAKAA
SIO_010081: UC34_RS25045
subclass of: SO_0000673
so part of: UC34_RS25045
location: complement(92745..93851)
location: region:92745-93851:-1
so has part: feature:92745-93851:-1:exon

WP_044454374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92745-93851:-1:exon

UC34_RS25060
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25060
old locus tag: UC34_24810
so part of: sequence
location: 95054..96169
location: region:95054-96169:1
so has part: feature:95054-96169:1:exon
subclass of: SO_0000010

position:95054:1
position: 95054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96169:1
position: 96169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95054-96169:1:exon

UC34_RS25060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25060
old locus tag: UC34_24810
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF019846.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTTAASNSLSGLRAKEDNYHKFLTKISAHFPEAAHYLNHEQMQFLDLKAVLADLQRIELGGFSHENVGGRYGRQQLNTPRALTRSHGYLALSRLLQRERRWCGNDVLFDALAGNGTFDRVMQELVVERPKYVGNDVSITMVRQAHRDNRLVFYSDLRTPVLRDGFADYAVSAYGTHHVPPDVRQAFVNAAARRLKAGGTLVIQDFVEGRPTACWYSECIAQFRSCGHNYQHFTRGELGALLLDAGLANVTEHMIYDPFVMPVEPGSSDDAARGHFYAYLIELFALDRLERIAAQERLSGRTLGNLILPYFAMSAQDMDEISRESANVVAEALIERVLTVKNIDGVRCLVAPRVAIAAVGTRPLRISQFPPL
SIO_010081: UC34_RS25060
subclass of: SO_0000673
so part of: UC34_RS25060
location: 95054..96169
location: region:95054-96169:1
so has part: feature:95054-96169:1:exon

WP_167370707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95054-96169:1:exon

UC34_RS25065
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25065
old locus tag: UC34_24815
so part of: sequence
location: 96166..96984
location: region:96166-96984:1
so has part: feature:96166-96984:1:exon
subclass of: SO_0000010

position:96166:1
position: 96166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96984:1
position: 96984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96166-96984:1:exon

UC34_RS25065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25065
old locus tag: UC34_24815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTHHLDTLRRDGYVLMPGVLGAAALPTIKTAAKHILDAHGSDTMRPSDLLADPDLTSALFSTRVRTTISALFGPSQTLYLYPNFTIRNNLYINWHTDDFFLDAPLEKASALPSLFMFNVYLQGNSLDAGGGLDVQSGTHRLPKSERQARAQADGPAPEHFVASGAGDLIVFDYRVVHRGTIPAGTVRPDRMALQWTMSTSDDVAAVYLAYLQIRASRKLHISDFTRHRAQEFFDDLPHIRAPALIERFSPAFFDSQLRFADMATYLREEPR
SIO_010081: UC34_RS25065
subclass of: SO_0000673
so part of: UC34_RS25065
location: 96166..96984
location: region:96166-96984:1
so has part: feature:96166-96984:1:exon

WP_044458681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96166-96984:1:exon

UC34_RS25070
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25070
old locus tag: UC34_24820
so part of: sequence
location: 96981..98657
location: region:96981-98657:1
so has part: feature:96981-98657:1:exon
subclass of: SO_0000010

position:96981:1
position: 96981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98657:1
position: 98657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96981-98657:1:exon

UC34_RS25070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25070
old locus tag: UC34_24820
inference: COORDINATES: protein motif:HMM:NF014795.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-binding protein
translation: MNLARYILRALHQEGIDYFFMVPGKLINPFMSCYARDYCEAIQPVVAAFEGGAAMMADGYARASGRFGVAIMLDGPGVANAVGALANAFADGYPVLLLAGQIPQHYEMMGALQDSTQSGLNLAAVLAPLTRHSFHVRHVENGSRYLREVVKGMYAPDAAPAYLAIAKDVLLQEPVDTYRPIGETLKRPHIADVEAICAFVDMLEPDSRIAILAGGRANRPVVTTKLIALSERDQIPVAATVSSKGVFPETHPHYLGVYGYSGHRRALDTLLGDPPDVLILLGFDTTQWTTLVWERGIKPAKYLLQVGTKPSDLDFILQADGAIVADEEVFLDTLLQSNALAPMRQAGVLYIERSGKSPLFYDYDAVDDDKLHPADAITAIHAQFSERICVVDSGNHRSFATHYWLSPRAQCFFSANTICSMGWAIPASIGIHLARREPCVVITGDGCMLMHGTEIQTAVRYHADIVYIVFNNAYYGATYFNNRNNIAEMSQLPTHDWVKFAEAFGARAKRVSTLHELQKTLDEIRDQPGPFVIDLICSHLPDTPASEYKTRVRHAEVL
SIO_010081: UC34_RS25070
subclass of: SO_0000673
so part of: UC34_RS25070
location: 96981..98657
location: region:96981-98657:1
so has part: feature:96981-98657:1:exon

WP_044458682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96981-98657:1:exon

UC34_RS25075
type: Gene
subclass of: SO_0000704
RO_0002162: 656178
locus tag: UC34_RS25075
old locus tag: UC34_24825
so part of: sequence
location: 98658..99872
location: region:98658-99872:1
so has part: feature:98658-99872:1:exon
subclass of: SO_0000010

position:98658:1
position: 98658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99872:1
position: 99872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98658-99872:1:exon

UC34_RS25075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 656178
locus tag: UC34_RS25075
old locus tag: UC34_24825
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MPENRTSSKTAIFLSCFLLVTGLTAVDFFNPSLPYMMTDLHASQTEIKSLIVVYMLVLGVAQFFYGSFSDHFGRRPAVILSFGVAALGLAVSAYVHNITALYVARALTAFGTAGCTVISRAVIVDIIFDEQAIKKAFSYFAMASQISPSLAPLAGAYIQQHFGWRWSFVTLAALMVAAWLALLIWMPETHEPPPKRQTVSSFLSPYVELATDFRFMAFSLSSALVFVFTIGYYTASPFAFHALGYAPVQNSLFYLAYSGAILAGSWAMGNILVKVPSVRLYLGTIVYYLAVCALFRWLSVDTSGWMIAALSFMIGFGSGVAAPLTLVLSMSIIEKHRGAASALQGAIKMFFTGVSMTLFYLTQVTSFSSLIDVFLVVAALLASLFVTNVIRAEAKKYLASSLKD
SIO_010081: UC34_RS25075
subclass of: SO_0000673
so part of: UC34_RS25075
location: 98658..99872
location: region:98658-99872:1
so has part: feature:98658-99872:1:exon

WP_044458683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98658-99872:1:exon