Gloeothece citriformis PCC 7424 plasmid pP742405, complete sequence.
type: Entry
definition: Gloeothece citriformis PCC 7424 plasmid pP742405, complete sequence.
sequence version: NC_011733.1
sequence date: 2023-03-10
sequence: sequence
division: CON
label: NC_011733.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000286
keyword: RefSeq
source: Gloeothece citriformis PCC 7424
organism: Gloeothece citriformis PCC 7424
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Gloeothece; Gloeothece citriformis.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001296.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4024136\nSource DNA and bacteria available from Himadri Pakrasi\n(pakrasi@biology2.wustl.edu)\nContacts: Himadri Pakrasi (pakrasi@biology2.wustl.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/10/2023 02:55:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,937\nCDSs (total) :: 5,878\nGenes (coding) :: 5,768\nCDSs (with protein) :: 5,768\nGenes (RNA) :: 59\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 110\nCDSs (without protein) :: 110\nPseudo Genes (ambiguous residues) :: 0 of 110\nPseudo Genes (frameshifted) :: 30 of 110\nPseudo Genes (incomplete) :: 76 of 110\nPseudo Genes (internal stop) :…

sequence
subclass of: SO_0000155
sequence length: 18083
topology: circular
so has quality: SO_0000988
location: 1..18083
location: region:1-18083:1
RO_0002162: 65393

NC_011733
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000286
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid5 of Cyanothece sp. PCC 7424
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Liberton, M.
author: Stoeckel, J.
author: Banerjee, A.
author: Singh, A.
author: Page, L.
author: Sato, H.
author: Zhao, L.
author: Sherman, L.
author: Pakrasi, H.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Liberton, M.
author: Stoeckel, J.
author: Banerjee, A.
author: Singh, A.
author: Page, L.
author: Sato, H.
author: Zhao, L.
author: Sherman, L.
author: Pakrasi, H.
author: Richardson, P.
journal: Submitted (11-DEC-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18083:1
position: 18083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18083:1:source
so part of: sequence
organism: Gloeothece citriformis PCC 7424
mol type: genomic DNA
strain: PCC 7424
type material: reference strain of Gloeothece citriformis
plasmid: pP742405

65393
type: Taxonomy
SIO_000068: taxonomy

PCC7424_RS28945
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28945
old locus tag: PCC7424_5614
so part of: sequence
location: complement(join(17651..18083,1..23))
location: region:1-18083:-1
so has part: feature:1-23:-1:exon
so has part: feature:17651-18083:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18083:-1
position: 18083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-23:-1:exon

position:23:-1
position: 23
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17651-18083:-1:exon

position:17651:-1
position: 17651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCC7424_RS28945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28945
old locus tag: PCC7424_5614
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNLYFYKEQKAMSKKKNAGFGSQVYGGSISVQTGGGTVVGSAIGGMNNTIDNQNIQVSQYAAEKKQTLAEAAAEIRQLLQQLEASYPIDTTSGQMMVAAEAVKTIETNPSLKQKVIAALKAGGLEAFEKAINHPVSAFVVGAIKGWQEAK
SIO_010081: PCC7424_RS28945
subclass of: SO_0000673
so part of: PCC7424_RS28945
location: complement(join(17651..18083,1..23))
location: region:1-18083:-1
so has part: feature:1-23:-1:exon
so has part: feature:17651-18083:-1:exon

WP_049858601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-23:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17651-18083:-1:exon

PCC7424_RS28855
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28855
old locus tag: PCC7424_5595
so part of: sequence
location: complement(16..672)
location: region:16-672:-1
so has part: feature:16-672:-1:exon
subclass of: SO_0000010

position:16:-1
position: 16
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672:-1
position: 672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16-672:-1:exon

PCC7424_RS28855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28855
old locus tag: PCC7424_5595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNYNLLGFSISIISLMVSLSVAYFAYFRSAKIKTTVGTHLIIFNSFINTISGKVWGGVTFVLPITFSNWEPRGGSVYQVRLVMGNPDNPQQYFDLAWSNFVKFVDGVEWENEDVAQPIAMPGRTSVSKFVRFDWSPLAGDKFNLSTGQYELFLLLWSSQSEKPDIQHRFLLTITEDIRSVFQQTIDNEKSFGIWIPIDNTRRSNRVITRVGFTREYE
SIO_010081: PCC7424_RS28855
subclass of: SO_0000673
so part of: PCC7424_RS28855
location: complement(16..672)
location: region:16-672:-1
so has part: feature:16-672:-1:exon

WP_041238611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16-672:-1:exon

PCC7424_RS28860
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28860
old locus tag: PCC7424_5596
so part of: sequence
location: complement(748..1965)
location: region:748-1965:-1
so has part: feature:748-1965:-1:exon
subclass of: SO_0000010

position:748:-1
position: 748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965:-1
position: 1965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748-1965:-1:exon

PCC7424_RS28860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28860
old locus tag: PCC7424_5596
inference: COORDINATES: protein motif:HMM:NF012708.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MNTLRLSIENQDKSWTLKPDREYIIGCDTDCHISLPEEEISEQQLKFDFDPQRNIWYVYNLDDSDSVYINSQSLTEYPITHPSYISVGNKLTFVVTPEGFDSSISHTKFQELLTLKYINRVFFDKEDPEQLRGTWLKNFSFSFNRNLALIDRFSKRRIAFKDQSKLYTVREDLYKDILIRLDEYKKNDYHLTEQLHFKLINYRDYKYENDRDRIYLEIVRNTIRCTKITTFLRFFVNGDNLYIAADSYALGRMSKRKVLWQTIILFLLISPGTWFIYVFTVGLGLVVALWYLYSSWINFIRSLFQGEPFLSALRVNFPKNIKSNAFDLDDSYMFLKSIYPLIISSLEDTLRKHNLLDKDLEEILKGISNDIGKTSINIDTGGGGIIGSVISGLNNTINNKSQTKG
SIO_010081: PCC7424_RS28860
subclass of: SO_0000673
so part of: PCC7424_RS28860
location: complement(748..1965)
location: region:748-1965:-1
so has part: feature:748-1965:-1:exon

WP_012599391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748-1965:-1:exon

PCC7424_RS28865
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28865
old locus tag: PCC7424_5597
so part of: sequence
location: 2071..3381
location: region:2071-3381:1
so has part: feature:2071-3381:1:exon
subclass of: SO_0000010

position:2071:1
position: 2071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3381:1
position: 3381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071-3381:1:exon

PCC7424_RS28865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28865
old locus tag: PCC7424_5597
inference: COORDINATES: protein motif:HMM:NF012298.2
GO function: GO:0004672 - protein kinase activity [Evidence IEA]
GO process: GO:0006468 - protein phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein kinase
translation: MKPSLKPGLILRERYLILEIIETEENYRVYVSKDQQSNNENCILREFIASDENEAVRVHKELESIIQQIKALKHPHIEKIEDFWLQGEVLYLVQSYFEGETNQARLSKGYLLTEDEVIELLKQILPVLSYLHSQSIVHGDISPSHLLRNSDETLILTHFGILREIASQMGIETSDAKLLDKVKGLSRFPYGSGQDLSALAVTVLMLLTGKEPQDLFNDQSQTWDWENYKLLSDRLTDVLNQMLPTNQTVSLTSADEIIALLEPSKTSPTVSTVPLSSPFTSHTEQVNPETNSESSQTNSPGFRVVLIVASIMVVFTGIATFAINQFRNSENVVVDFPSPSPSLDAQTPNQFEFTPPTPSSQKNGSSTNATISGIPGTKNVRSGAGTVYGVIGELTTGTRVQIISSSYDSGGYLWYQIYHPSSGLRGWVAEQLITRD
SIO_010081: PCC7424_RS28865
subclass of: SO_0000673
so part of: PCC7424_RS28865
location: 2071..3381
location: region:2071-3381:1
so has part: feature:2071-3381:1:exon

WP_012599392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2071-3381:1:exon

PCC7424_RS28870
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28870
old locus tag: PCC7424_5598
so part of: sequence
location: 3519..3803
location: region:3519-3803:1
so has part: feature:3519-3803:1:exon
subclass of: SO_0000010

position:3519:1
position: 3519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3803:1
position: 3803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3519-3803:1:exon

PCC7424_RS28870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28870
old locus tag: PCC7424_5598
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012599410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSLTTSEPNVLRPEDFDPPLKRKEPIVPYYWTLDEIATELGVTSRRVGYDITGYPPRKIQPSLKAYKAGSLFLVPDADALAYIQRFRERKKS
SIO_010081: PCC7424_RS28870
subclass of: SO_0000673
so part of: PCC7424_RS28870
location: 3519..3803
location: region:3519-3803:1
so has part: feature:3519-3803:1:exon

WP_012599393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3519-3803:1:exon

PCC7424_RS28875
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28875
so part of: sequence
location: 3937..5070
location: region:3937-5070:1
so has part: feature:3937-5070:1:exon
subclass of: SO_0000010

position:3937:1
position: 3937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5070:1
position: 5070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937-5070:1:exon

PCC7424_RS28875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28875
inference: COORDINATES: protein motif:HMM:NF024367.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MINPTSNRRGWTSASKNLAAVDSRTTTNTDLHQNINSGYSEWSESLVKPSLIQANVIPFAPGEAWDWLIYSDKIPRRNTGVLTYGVLKQYDNFEKSGGWLVQNINPVTGEDSLYNRAKFDHPRVGHDGKVIKYESPPKNPTEPIFLKVPHEICHDVWSDVANVNNIPLPPSSEDPPHFWEWFKNSSAPLWITEGEKKAGCLLSKGRVTTSVPGINNYHDVKLKQEKNILKLHPYLEHFADGRDIIITFDRDEKPKTRVAVRKAIKKLGKLFKDKGCNVKICIWDGKKGKGIDDFLANGNTLSDCQYLTFERYCAGAERIEKYKGASHPVGEKINSRYIGNVSLPDARIIALKAPKGTGKTTLMAQLSQQFKDEGKPL
SIO_010081: PCC7424_RS28875
subclass of: SO_0000673
so part of: PCC7424_RS28875
location: 3937..5070
location: region:3937-5070:1
so has part: feature:3937-5070:1:exon

WP_041238612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3937-5070:1:exon

PCC7424_RS28880
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28880
old locus tag: PCC7424_5600
so part of: sequence
location: 5121..5444
location: region:5121-5444:1
so has part: feature:5121-5444:1:exon
subclass of: SO_0000010

position:5121:1
position: 5121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5444:1
position: 5444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5121-5444:1:exon

PCC7424_RS28880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28880
old locus tag: PCC7424_5600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYRDEMVANSDHRKEGFLFGFGVVIDSLSLKSKFKFDVDRWIDSGQPYVVFLDEIEQLLWHLLDSNTEVKNNRLEIEENFRKLLSPRLSGGDWGCGFIRFIPRLSH
SIO_010081: PCC7424_RS28880
subclass of: SO_0000673
so part of: PCC7424_RS28880
location: 5121..5444
location: region:5121-5444:1
so has part: feature:5121-5444:1:exon

WP_041238613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5121-5444:1:exon

PCC7424_RS28885
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28885
so part of: sequence
location: 5526..6950
location: region:5526-6950:1
so has part: feature:5526-6950:1:exon
subclass of: SO_0000010

position:5526:1
position: 5526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6950:1
position: 6950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5526-6950:1:exon

PCC7424_RS28885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYQDNTPEALIADLIDDLGELANTPPESRKPHFIFTHAREHKSLYSAVNLKRLINKYYSSLKVLVLDANTVVDPNNEAFGGVLELNNLIPKYDVIIASPVIETGVSIDKEHQFSCVWAIGQGVIPTDSVRQTLSRVRDNCDRRVWLPKRGLNKIGNGATNVKSLLETEGQKFQAHTTILRRFDWDEEADASTGIALDTWGKMACRINYGYMFYRDVAAEELEAEGNTIIWNEKTDYKALRNLRKRVSKNRDDSYNSELDKTEQTPSPTSEELKVLETKLTKTETERRQLKRGKLEKKYKVPFSASLAVEDDKNLHPKLRFYYYLTIGRKHLPERDKKVASSQVYKGKAWLPDFNKSQFGFLVHIFDKFGATKIFSMEEQEFSMDSEILKAIVEEALKYERDLKKLNITVSRELSVMQNINNLFKPTGMYFPFLRKIRDGERRIRIYGSPRFRFDHQICEEILKAWLAADESRSS
SIO_010081: PCC7424_RS28885
subclass of: SO_0000673
so part of: PCC7424_RS28885
location: 5526..6950
location: region:5526-6950:1
so has part: feature:5526-6950:1:exon

WP_041238614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5526-6950:1:exon

PCC7424_RS29580
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
gene: mobQ
locus tag: PCC7424_RS29580
old locus tag: PCC7424_5602
so part of: sequence
location: complement(7430..9622)
location: region:7430-9622:-1
so has part: feature:7430-9622:-1:exon
subclass of: SO_0000010

position:7430:-1
position: 7430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9622:-1
position: 9622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7430-9622:-1:exon

PCC7424_RS29580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
gene: mobQ
locus tag: PCC7424_RS29580
old locus tag: PCC7424_5602
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012599412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHLNAKVISRGKGKSSTAAAAYRAGDKIHDERLGKTFDYTRKQGVYATEILAPNDAPDWVYNRSKLWNAVELFETRSNSQVAREFDIALPVELSHDQKRSLVKTWVSDQFVNSGVVADVAFHDLNSQNPHVHILLTTRVIDSSGFGRKTREWDKKDFLFQVRESWADYTNEALLNAGTTERIDHRTLEEQGINRIPQIHLGPDVAAMMERGIATERSQAYLTIEATNREIEALEKQLTLLDETIRPIGEDELELLELELPNKSISTHRSDEQSSREREETPEPGITDLTAEFDRLTERLRSSGQQDRKPGKQTNPTVQPTEPAVSNLDDTASRLSQLAKRLKPTQERNAETTGVARSSVESQATTSQNRTDPAISPQIPTDADLAGRPHLHHKGSSEPVISDRNSRGTNSVANAPNSTPPAATPTKPNKRPSKQHRNPVRQDRKTVAQVTPTPKKQPSSQQKEVISPPNEEPEKQNNQLTDAELVALVRLFTQWEKTVPSPPDENKRKRLTEQFVAQEKELRKLSNSISTQKQFLSDNPPRSWKNPFGLDPDLYSSKEYDLSNSRYHYTNLQQKQKNTLSELANLSAEETKYNNWLSSPETQKMMELKKQLYSPELSERINQLMEVYQTYHNALTILEKRGVKTANKSYFAGNIYRVEKVDNTLTLTHKDKENPILVVTDNRDTGGIIDIIQCDLTDEDKKTMEKAAEYVSRPPIQQVQKHRGGLSR
SIO_010081: PCC7424_RS29580
subclass of: SO_0000673
so part of: PCC7424_RS29580
location: complement(7430..9622)
location: region:7430-9622:-1
so has part: feature:7430-9622:-1:exon

WP_012599394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7430-9622:-1:exon

PCC7424_RS28900
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28900
old locus tag: PCC7424_5603
so part of: sequence
location: 9898..10158
location: region:9898-10158:1
so has part: feature:9898-10158:1:exon
subclass of: SO_0000010

position:9898:1
position: 9898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10158:1
position: 10158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9898-10158:1:exon

PCC7424_RS28900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28900
old locus tag: PCC7424_5603
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKRLEQLLKKKEQLNAQIQKIKARESAEKRKEDTRKKILLGALVMEMMDKGELDEAKIMKRLDGFLTREIDRRLFDFSVSKTSKK
SIO_010081: PCC7424_RS28900
subclass of: SO_0000673
so part of: PCC7424_RS28900
location: 9898..10158
location: region:9898-10158:1
so has part: feature:9898-10158:1:exon

WP_012599395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9898-10158:1:exon

PCC7424_RS28905
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28905
old locus tag: PCC7424_5604
so part of: sequence
location: complement(10184..10945)
location: region:10184-10945:-1
so has part: feature:10184-10945:-1:exon
subclass of: SO_0000010

position:10184:-1
position: 10184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10945:-1
position: 10945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10184-10945:-1:exon

PCC7424_RS28905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28905
old locus tag: PCC7424_5604
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012599414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MPESSKTTAITFRCPSDVIDSIDGQAKATRQNRTDVLVDLILGSVPNVKVTERQKLPPLPAIYFVFTPDKRLLYIGKADNLQKRWNNHYKYQYFLETSIDSRIGYFTLDNADSLDEVIEEFKEESVATPQENILVTNGQLNELRQELYSLKRQFDITFASLSQFGLDNLLKRFEAVKPPRGKQTWQPTGEDQREGITRGNLMRHFGFNSTPDLESAALFYSLDPDKYLEELSGWQCKPMDKNNSRSRFFPHKS
SIO_010081: PCC7424_RS28905
subclass of: SO_0000673
so part of: PCC7424_RS28905
location: complement(10184..10945)
location: region:10184-10945:-1
so has part: feature:10184-10945:-1:exon

WP_012599396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10184-10945:-1:exon

PCC7424_RS28910
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28910
old locus tag: PCC7424_5605
so part of: sequence
location: complement(11774..12904)
location: region:11774-12904:-1
so has part: feature:11774-12904:-1:exon
subclass of: SO_0000010

position:11774:-1
position: 11774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12904:-1
position: 12904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11774-12904:-1:exon

PCC7424_RS28910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28910
old locus tag: PCC7424_5605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRATTLLSTIIFQKKGMLSIAAKSAQHNPVYLARFFMFTKKPSLLILSSLLLIIVNSFMASPSLAKPTQICLSSSIENINLEIQLIDQINRIKLNAEKAVNELEVINREIDRYSKNINTINEIGGKIAGWDRTIIGIYDSMLSDYVNIPGVEFNLRGKTGISIDADQKIISENRQIINISSAKLILDLSGVLEMFTPSNLADWITGTSLSIAETKLAITSNAAEASSVLSEKLKDLRQKCEQEYSVQNSDSNVENNELENNELENDDISLKNSPSTTVIQLTFSNNNYENVVAKRDNIIKQLNNPYTCSYFQETQGQIAVGLYILYPTNQLSMLSKLLSNFNDVYFLNTQMELDTDGMKTLLYNIPDTNNLQCNF
SIO_010081: PCC7424_RS28910
subclass of: SO_0000673
so part of: PCC7424_RS28910
location: complement(11774..12904)
location: region:11774-12904:-1
so has part: feature:11774-12904:-1:exon

WP_157867692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11774-12904:-1:exon

PCC7424_RS28915
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28915
old locus tag: PCC7424_5606
so part of: sequence
location: complement(13167..13607)
location: region:13167-13607:-1
so has part: feature:13167-13607:-1:exon
subclass of: SO_0000010

position:13167:-1
position: 13167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13607:-1
position: 13607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13167-13607:-1:exon

PCC7424_RS28915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28915
old locus tag: PCC7424_5606
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSNKLLVHYTLVMYGTLISLALPVFAAPKGPDMGYPSLPRFDADVNGDYRKDFCRFVGDAGQIFLSCQFRTSDGYSSNQYEFNSKPGIDLGYPNMPRAMKDVNDDDRADFCRYIGNQGDSNNPLRESCLLAGKAGFSNKEYRTDQ
SIO_010081: PCC7424_RS28915
subclass of: SO_0000673
so part of: PCC7424_RS28915
location: complement(13167..13607)
location: region:13167-13607:-1
so has part: feature:13167-13607:-1:exon

WP_012599398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13167-13607:-1:exon

PCC7424_RS32390
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS32390
old locus tag: PCC7424_5607
so part of: sequence
location: complement(13729..13854)
location: region:13729-13854:-1
so has part: feature:13729-13854:-1:exon
subclass of: SO_0000010

position:13729:-1
position: 13729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13854:-1
position: 13854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13729-13854:-1:exon

PCC7424_RS32390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS32390
old locus tag: PCC7424_5607
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDKLPDCRDYHHCTIENLGRTPKKLTVYDEKTKDLLSIFT
SIO_010081: PCC7424_RS32390
subclass of: SO_0000673
so part of: PCC7424_RS32390
location: complement(13729..13854)
location: region:13729-13854:-1
so has part: feature:13729-13854:-1:exon

WP_012599399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13729-13854:-1:exon

PCC7424_RS30445
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS30445
old locus tag: PCC7424_5608
so part of: sequence
location: 13877..14194
location: region:13877-14194:1
so has part: feature:13877-14194:1:exon
subclass of: SO_0000010

position:13877:1
position: 13877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14194:1
position: 14194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13877-14194:1:exon

PCC7424_RS30445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS30445
old locus tag: PCC7424_5608
inference: COORDINATES: protein motif:HMM:NF024803.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MNKQEAADYLGVSTRAIERYTQKGKLSVKYENAKTRPVAVYDQAELDRLKDELNIVNALYKLCENATGSRIATLAIKFRAIRIKNKISNDVIGITVTNFNVVQSI
SIO_010081: PCC7424_RS30445
subclass of: SO_0000673
so part of: PCC7424_RS30445
location: 13877..14194
location: region:13877-14194:1
so has part: feature:13877-14194:1:exon

WP_012599400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13877-14194:1:exon

PCC7424_RS28920
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28920
old locus tag: PCC7424_5609
so part of: sequence
location: complement(14096..14647)
location: region:14096-14647:-1
so has part: feature:14096-14647:-1:exon
subclass of: SO_0000010

position:14096:-1
position: 14096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14647:-1
position: 14647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14096-14647:-1:exon

PCC7424_RS28920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28920
old locus tag: PCC7424_5609
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLKRLLIAIGFATTLGVSQFSVIKEAYSQTSGLRGKFDGKNLQEARIRSVGDLAVAVEVNGQQWFASRRGEVNFSKIIGCTVGNFNRDSYSDIACLYDYGNFDVGIWVLLSDGRNFNSSIWWRSGQNNFNPEAIVPLAGGVRVVSIDNNSDGLNDIKIRYRYPNDIITDLVFYSDGTKFYR
SIO_010081: PCC7424_RS28920
subclass of: SO_0000673
so part of: PCC7424_RS28920
location: complement(14096..14647)
location: region:14096-14647:-1
so has part: feature:14096-14647:-1:exon

WP_012599401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14096-14647:-1:exon

PCC7424_RS28925
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28925
old locus tag: PCC7424_5610
so part of: sequence
location: complement(15115..15531)
location: region:15115-15531:-1
so has part: feature:15115-15531:-1:exon
subclass of: SO_0000010

position:15115:-1
position: 15115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15531:-1
position: 15531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15115-15531:-1:exon

PCC7424_RS28925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28925
old locus tag: PCC7424_5610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINTKHLEYFLIGSLFLAGLSITTALLKSPRAFANNFSMLGDWSGSPDCPIVFYKDNQNYVEGRCDGNFHQHIFRGNYSNSNFISLTVTRIDPKHCQTSTPAKIRVIDYNHVNYWQAGWHGCGQETNPGTQDWYRVNN
SIO_010081: PCC7424_RS28925
subclass of: SO_0000673
so part of: PCC7424_RS28925
location: complement(15115..15531)
location: region:15115-15531:-1
so has part: feature:15115-15531:-1:exon

WP_012599402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15115-15531:-1:exon

PCC7424_RS31120
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS31120
old locus tag: PCC7424_5611
so part of: sequence
location: 15913..16137
location: region:15913-16137:1
so has part: feature:15913-16137:1:exon
subclass of: SO_0000010

position:15913:1
position: 15913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16137:1
position: 16137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15913-16137:1:exon

PCC7424_RS31120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS31120
old locus tag: PCC7424_5611
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015211437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTEAIQSLKTLPSTAPTVPIENKLLLTLKEVQALTGLSRETLREAIASNQLKAQIVGKAWRVKRKDLEEYIENL
SIO_010081: PCC7424_RS31120
subclass of: SO_0000673
so part of: PCC7424_RS31120
location: 15913..16137
location: region:15913-16137:1
so has part: feature:15913-16137:1:exon

WP_239005535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15913-16137:1:exon

PCC7424_RS28935
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28935
old locus tag: PCC7424_5612
so part of: sequence
location: 16312..16596
location: region:16312-16596:1
so has part: feature:16312-16596:1:exon
subclass of: SO_0000010

position:16312:1
position: 16312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16596:1
position: 16596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16312-16596:1:exon

PCC7424_RS28935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28935
old locus tag: PCC7424_5612
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013334511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQSPINVTYSLEEVLKQINQKLDNLDTKFTAKIDNLQKDVTDLKIGQARLEEKVDGLGKRLDFQEFINKGVLVGLVVAILGGAAKLFGWVGNP
SIO_010081: PCC7424_RS28935
subclass of: SO_0000673
so part of: PCC7424_RS28935
location: 16312..16596
location: region:16312-16596:1
so has part: feature:16312-16596:1:exon

WP_012599404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16312-16596:1:exon

PCC7424_RS28940
type: Gene
subclass of: SO_0000704
RO_0002162: 65393
locus tag: PCC7424_RS28940
old locus tag: PCC7424_5613
so part of: sequence
location: 16674..17495
location: region:16674-17495:1
so has part: feature:16674-17495:1:exon
subclass of: SO_0000010

position:16674:1
position: 16674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17495:1
position: 17495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16674-17495:1:exon

PCC7424_RS28940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 65393
locus tag: PCC7424_RS28940
old locus tag: PCC7424_5613
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012599417.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNSITRATSDTEIIILWLNGKSKTTVISYQCHVKQFLEFVGKPLRDVTLDDLSLWVNRLNLTYQPVTVANKILTVKSLFSFACRVGYLTVNVGSFIKSPKLKDTLAERILDPSEVKRLINAAPNERDSVLLSLMYGCGLRVSEVCGLNWSDLKNGKATVFGKGAKTRIVIIPPNLWDRLMKLPRDGEAVFMSRRGNRLERTYIHKMIKECCHLSGVSEKASSHWLRHSHASHAVEAGCNLRLLQQSLGHSKLETTEKYLHINPDEGSSQFIDI
SIO_010081: PCC7424_RS28940
subclass of: SO_0000673
so part of: PCC7424_RS28940
location: 16674..17495
location: region:16674-17495:1
so has part: feature:16674-17495:1:exon

WP_012599405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16674-17495:1:exon