Endosymbiont of Euscepes postfasciatus isolate NAREPO1 chromosome, complete genome.
type: Entry
definition: Endosymbiont of Euscepes postfasciatus isolate NAREPO1 chromosome, complete genome.
sequence version: NZ_AP018159.1
sequence date: 2022-12-31
sequence: sequence
division: CON
label: NZ_AP018159.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00080337
keyword: RefSeq
source: endosymbiont of Euscepes postfasciatus
organism: endosymbiont of Euscepes postfasciatus
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria.
reference: 1
references: 28923972
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP018159.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.6\nGenome Coverage :: 116X\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 01:26:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 244\nCDSs (total) :: 213\nGenes (coding) :: 209\nCDSs (with protein) :: 209\nGenes (RNA) :: 31\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 26\nncRNAs :: 2\nPseudo Genes (total) :: 4\nCDSs (without protein) :: 4\nPseudo Genes (ambiguous residues) :: 0 of 4\nPseudo Genes (frameshifted) :: 1 of 4\nPseudo Genes (incomplete) :: 3 of 4\nPseudo Genes (internal stop) :: 0 of 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 219841
topology: circular
so has quality: SO_0000988
location: 1..219841
location: region:1-219841:1
RO_0002162: 650377

NZ_AP018159
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00080337
type: BioSample
SIO_000068: biosample

1
title: Small genome symbiont underlies cuticle hardness in beetles
author: Anbutsu, H.
author: Moriyama, M.
author: Nikoh, N.
author: Hosokawa, T.
author: Futahashi, R.
author: Tanahashi, M.
author: Meng, X.Y.
author: Kuriwada, T.
author: Mori, N.
author: Oshima, K.
author: Hattori, M.
author: Fujie, M.
author: Satoh, N.
author: Maeda, T.
author: Shigenobu, S.
author: Koga, R.
author: Fukatsu, T.
journal: Proc Natl Acad Sci U S A 114 (40), E8382-E8391 (2017)
pubmed: 28923972
comments: DOI:10.1073/pnas.1712857114

28923972
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Anbutsu, H.
author: Nikoh, N.
author: Hosokawa, T.
author: Fujie, M.
author: Satoh, N.
author: Koga, R.
author: Fukatsu, T.
journal: Submitted (13-JUN-2017) Contact:Naruo Nikoh The Open University of Japan; 2-11 Wakaba, Mihama, Chiba, Chiba 261-8586, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219841:1
position: 219841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-219841:1:source
so part of: sequence
organism: endosymbiont of Euscepes postfasciatus
mol type: genomic DNA
isolate: NAREPO1
isolation source: bacteriome
host: Euscepes postfasciatus
country: Japan: Okinawa
collection date: 2004

650377
type: Taxonomy
SIO_000068: taxonomy

NAREPO1_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaN
locus tag: NAREPO1_RS00005
old locus tag: NAREPO1_00010
so part of: sequence
location: 49..1152
location: region:49-1152:1
so has part: feature:49-1152:1:exon
subclass of: SO_0000010

position:49:1
position: 49
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152:1
position: 1152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49-1152:1:exon

NAREPO1_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaN
locus tag: NAREPO1_RS00005
old locus tag: NAREPO1_00010
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MNFFILKDKIYDALKKINNITFLNNLDNEKNIILKLKNNILYIIGNDSENELIIKIHLENNFEDGIVFISYKKLINICKSIPNKTVINFLKEKNFIILKTDKSLFHIKLYSLDKFNSYFNYDKSIYNICISKINLIFLLKSVYISIANNDVRNYLNGLYLNIYENKIISISTDSYRLSFSKINLINNINNYSFIIYKKSVLEIIKIFDNIEFLNIYIYIYSKFITFCSNNYKFTSRFLNDEFPNCNDIINKNFIHIVKIDKDYLINVIYRISSILESKNYLIILNFIKNNILISSINSNDESAKENIDIIYDGPKIQIGINYKYILDILLILEQKYILFKFNDDKSSIEINEENNLDRKYIIMPIRI
SIO_010081: NAREPO1_RS00005
subclass of: SO_0000673
so part of: NAREPO1_RS00005
location: 49..1152
location: region:49-1152:1
so has part: feature:49-1152:1:exon

WP_130623980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49-1152:1:exon

NAREPO1_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00010
old locus tag: NAREPO1_00020
so part of: sequence
location: 1162..3534
location: region:1162-3534:1
so has part: feature:1162-3534:1:exon
subclass of: SO_0000010

position:1162:1
position: 1162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3534:1
position: 3534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162-3534:1:exon

NAREPO1_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00010
old locus tag: NAREPO1_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012619400.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit B
translation: MMNKYNASNIKVLKGLDAVKKRPGMYIGNTEDGTGFHHMVFEVIDNSIDESLEGYCDNIYIKIYNDNSISVYDNGRGIPVDLNTEYNKSSAEIIMTILHSGGKFDNESYKISGGLHGVGISVVNALSSKLELIIYKNGKIYKQIYINGNPEKNIEEIGNTDKNGTFIRFWPNLEIFTKNNVFQYNILYKRLLELSFLNSKLSITLEDKRNNIIQNFKNTEGLKSFIKFLIEKENVLHQNYCYIYEVKNNIEIEIILQWVDNFKETFYCFTNNIKQKDGGTHLSAVKSSITKTINLYIKEQKKKIKHDIIGDDTREGLICIISIKFPNPKFSSQTKDKLISSEIKNSIESVVSEKFMDFLIENPIDSKCIINKIIQSLLSREAAKKAKEIVRKKNQFDFNKLVGKLSDCQEKNPAFSELYLVEGDSAGGSAKQARNRKNQAVLSLKGKIINVEKSNLDKILLSKEILNLITVMGCGIEKHNFNINKLRYQKIIIMTDADVDGSHIRTLLLTFFYRFLPEIIKKGFLYIAQPPLYKIIKNKKEKYLKNYNELIKFKIKFIIENFYKYMYIDKKYYLNLEDILYDYINIKNIMLSLENKIPYNFLSFLTIYEIFDLDKINDFNYFNQYINNIFVKFNEINNNLYKFEINNLSKNNFLLIIKELKNGIYINYFIKNIFFNSIDYIKISKFNVKINYFIKLIKNNNFINFYNIIDLLLEDSIKNMIIHRYKGLGEMNPIQLWDTTMNPNNRNLLKIIINNDDESNSLFNILMGESVDLRKKFIEDYSNQVENLDI
SIO_010081: NAREPO1_RS00010
subclass of: SO_0000673
so part of: NAREPO1_RS00010
location: 1162..3534
location: region:1162-3534:1
so has part: feature:1162-3534:1:exon

WP_130623981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162-3534:1:exon

NAREPO1_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: lysS
locus tag: NAREPO1_RS00015
old locus tag: NAREPO1_00030
so part of: sequence
location: complement(3547..4905)
location: region:3547-4905:-1
so has part: feature:3547-4905:-1:exon
subclass of: SO_0000010

position:3547:-1
position: 3547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4905:-1
position: 4905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547-4905:-1:exon

NAREPO1_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: lysS
locus tag: NAREPO1_RS00015
old locus tag: NAREPO1_00030
EC number: 6.1.1.6
inference: COORDINATES: protein motif:HMM:NF001756.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MYIENIIKKYKYFNKDYFNSNKINVITYGRLMYKRIIGKVMFFTIQDIFNSIQIYFSYNFLLKNIKLKKINIGSILKIKGYLFKTNVNELTINCNKINILVNCFNKLYVKSNLSIKENYKYKKRYLDLIVNNKSKDIFLIRSKIILEIRNFLFKKHFIEVETPILQSLIGGAEANSFKTKLDIFNKNYYLRISPELYLKKLIVGGFNKIFEIGKNFRNEGISHKHNPEFTMLELYISYKNYKYLITFIQNLIRNIYLKIFKSSILKINNINIDLLKDFNIMSIEESLIKFNKNLNIDDYKSCYNYAKSIEINIENNISLLKLRYEIFKKTVENKLIYPTFIINYPIEISPLSKRNIKNKDIADRFELFINGLEIANGFSELNNFKDQILRFKKQNKFKKNKSFDKNYIDALKYGLPPTSGIGIGIDRLIMILANINNIKDVILFPSTRYKEI
SIO_010081: NAREPO1_RS00015
subclass of: SO_0000673
so part of: NAREPO1_RS00015
location: complement(3547..4905)
location: region:3547-4905:-1
so has part: feature:3547-4905:-1:exon

WP_130623982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3547-4905:-1:exon

NAREPO1_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00020
old locus tag: NAREPO1_00040
so part of: sequence
location: complement(4957..5718)
location: region:4957-5718:-1
so has part: feature:4957-5718:-1:exon
subclass of: SO_0000010

position:4957:-1
position: 4957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5718:-1
position: 5718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957-5718:-1:exon

NAREPO1_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00020
old locus tag: NAREPO1_00040
inference: COORDINATES: protein motif:HMM:NF012684.2
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor-like protein
translation: MFEHFFKKDDENSCIVHIQSGSGGIDSRNWIVILSKMYIKWANLNKLNVNIKSSFSLESNKNKNIILEIDGMYSYGLFKTEKGIHKLIRKSPFNFWKRHTSFGSVDIYKKNAFNYEKIDNIDYKDIKISFCKSSGHGGQHINKTKSSVILKHIPTGIISKSQDTKSQNKNKNIAFNKLKYKLNKININNIENNKKFLYNLKSNISWSGDYKRFYIFDNSIIKDLKTGITTKNVKYILNGNIEIFVEKSLKLNI
SIO_010081: NAREPO1_RS00020
subclass of: SO_0000673
so part of: NAREPO1_RS00020
location: complement(4957..5718)
location: region:4957-5718:-1
so has part: feature:4957-5718:-1:exon

WP_130623983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4957-5718:-1:exon

NAREPO1_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00025
old locus tag: NAREPO1_00050
so part of: sequence
location: complement(5732..7309)
location: region:5732-7309:-1
so has part: feature:5732-7309:-1:exon
subclass of: SO_0000010

position:5732:-1
position: 5732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7309:-1
position: 7309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5732-7309:-1:exon

NAREPO1_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00025
old locus tag: NAREPO1_00050
inference: COORDINATES: protein motif:HMM:NF004952.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S1
translation: MIKTFSKIFENFSKLKINNYKKILKGTVISIEKNFIIVDSGLKSESYIPIEEFIDENNSLEVNLGDVVEVYLDSIENGYGKTILSRKKAKIFNSWEKLNKIFKEDSIIVGKIIEKVKGGFIILVENIRAFLPGSLVDFKLMNSTNVEGENLELKIIKLDKKNNNIILSRKAIIKFDNAKNKEEFLNNLKVNDIVKGVVKNITDYGAFIDLGFVDGLLHITDITWKRIKHPSEIVNLGDEIDVKIINFDVESSKISLGLKQLSDDPWLKILEKYPKYTKLEGRVTNLTDYGFFVEIEDGIEGLVHISEIDWKYKNINPSKIVKINDIIEIMILDINIDSRRISLGLKQCKDNPWISFNNKYKIGDKIQGNVKSITEFGIFVELSNDIDGLIHITDISWLLDPKKDLSKYSKNTQIESIILQIDLNKFRISLGIKQMYKDPFDIFYHENLKKNMIYGTILENKNFVKINDYILGKIINYSNLNNNFLIYNKKYIFRIIDFDKKHRYINLYLDISDNNFINNLLLEKK
SIO_010081: NAREPO1_RS00025
subclass of: SO_0000673
so part of: NAREPO1_RS00025
location: complement(5732..7309)
location: region:5732-7309:-1
so has part: feature:5732-7309:-1:exon

WP_130623984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5732-7309:-1:exon

NAREPO1_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aroA
locus tag: NAREPO1_RS00030
old locus tag: NAREPO1_00060
so part of: sequence
location: complement(7400..8698)
location: region:7400-8698:-1
so has part: feature:7400-8698:-1:exon
subclass of: SO_0000010

position:7400:-1
position: 7400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8698:-1
position: 8698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400-8698:-1:exon

NAREPO1_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aroA
locus tag: NAREPO1_RS00030
old locus tag: NAREPO1_00060
EC number: 2.5.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053822.1
GO function: GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phosphoshikimate 1-carboxyvinyltransferase
translation: MKEEKKLVINPIKNLIGDVYIPGSKSISNRALLLSSLCYDHSTKLINILKCDDVNYMISILKKLKVNINFNNEDIAIINSSKKLFLKEKKILYTGNAGTVMRFILSYLSIYKNINIILTGDNRMKNRPINHLVDILRNGGATINYLEKNGFPPLQILGGYNGGNLFINGSISSQFLSSILMISPILKNDTNIEIINNLVSKSYIDITIKMMKDFGIEIVNYNYKKIYIKGNQKYISPKIYKIESDASSASYFVAGGAIKHNNNVNIIGIGKNSIQGDIKFVKILKKIGANITINKKFINSKNNFNYLKSIDIDANNIPDSAMTLAIVCLCSNDKSVIKNIYNWRVKETDRIQAMANELRKIGANIKEGNDYISITPPNKFKPAIIDTYNDHRIAMCFSLIPLFNVKIIINNPNCVNKSFPNYFKLLNKIIVN
SIO_010081: NAREPO1_RS00030
subclass of: SO_0000673
so part of: NAREPO1_RS00030
location: complement(7400..8698)
location: region:7400-8698:-1
so has part: feature:7400-8698:-1:exon

WP_130623985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7400-8698:-1:exon

NAREPO1_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: serS
locus tag: NAREPO1_RS00035
old locus tag: NAREPO1_00070
so part of: sequence
location: complement(8781..10028)
location: region:8781-10028:-1
so has part: feature:8781-10028:-1:exon
subclass of: SO_0000010

position:8781:-1
position: 8781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10028:-1
position: 10028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8781-10028:-1:exon

NAREPO1_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: serS
locus tag: NAREPO1_RS00035
old locus tag: NAREPO1_00070
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070293.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MISIKFIKQNLNFVLNNLKKRNFIIDIDFIISKDNIRKSIQNKLENLRFKSNQFSNNFKLKKSKKNYINNLNFKNIRKKINKLKSDLNLIKVEIKNYLYTIPNIFDDNSIPIGNSNKNIVIYKWGNKKTFDFKISSYISIGKKLDCMDFKLSSNISGSKFVIMKNKIAKLNRSIIQFMLDIHINKHFYEEIYVPLIVNKESMYGSGQFPKFINDSFNIIYNSNNYYLIPTSEVPLINLFRNKILSEKQIPIKYVSYTPCFRTEFNSYGKNNCGLIKLNQFDKVELIRIVDQNSSKKHLEELTNDSEIILKLLNLHYRKILLSSNELPFTSYKTYDLEVWFPYKNKYIEVSSCSNTLDFQSRRILSRYRDKNNNILLTHIINGSGLAVSRILAAIIENYQNKNLDFDIPEVLKKYY
SIO_010081: NAREPO1_RS00035
subclass of: SO_0000673
so part of: NAREPO1_RS00035
location: complement(8781..10028)
location: region:8781-10028:-1
so has part: feature:8781-10028:-1:exon

WP_130623986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8781-10028:-1:exon

NAREPO1_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: infA
locus tag: NAREPO1_RS00040
old locus tag: NAREPO1_00080
so part of: sequence
location: 10238..10459
location: region:10238-10459:1
so has part: feature:10238-10459:1:exon
subclass of: SO_0000010

position:10238:1
position: 10238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10459:1
position: 10459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10238-10459:1:exon

NAREPO1_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: infA
locus tag: NAREPO1_RS00040
old locus tag: NAREPO1_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015482573.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MIINKKFIEMKGKIINTLPNTNFKVELENGNIIIAHISGKIRKNYIKILNGDNVIVQISPYDISKGRIIFRNK
SIO_010081: NAREPO1_RS00040
subclass of: SO_0000673
so part of: NAREPO1_RS00040
location: 10238..10459
location: region:10238-10459:1
so has part: feature:10238-10459:1:exon

WP_130623987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10238-10459:1:exon

NAREPO1_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00045
old locus tag: NAREPO1_00090
so part of: sequence
location: 10474..11904
location: region:10474-11904:1
so has part: feature:10474-11904:1:exon
subclass of: SO_0000010

position:10474:1
position: 10474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11904:1
position: 11904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10474-11904:1:exon

NAREPO1_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00045
old locus tag: NAREPO1_00090
inference: COORDINATES: protein motif:HMM:NF039907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
translation: MNIKIEYCKKKINYKKINNLIKKIKYINPNYFDIYIQYNNTSKITLENNNIKNFYFKEFNGINCRYIKNKFIYSISSNNIDLDFIKNNIINCNNFLYNKKNKLYIKNNYLYEYNKSFNKNSNINNQYYIYIIKKIHKYIKKYNNNIENIKIDLINSKDKILIINNNKYITDTRPLIILKILIEININKKKSIGFSSIGLRSNIYDIENIIPNKNITYINKCINDSFEMAISNLYAKDAPSGRFPIVLSSGCPGVLLHEAIGHALEADFLNDKTSIFHNKLNEKVTSKICTIVDNGNFKKLNGYINIDDEGNIGKLNILIKNGILKKFMSDIYNSMLMNIEITGNGRRESYKNNIIPRMTNTYLLPGNSNPNEIINTIDYGIYAKNFTDGQVDISSGNFTFSTSLAFLIKNGKISHPLKRITLIGNNIDIMNKISMIGSDFEMDLGSSFCVKDNQYIPVSVGQPTIKIDKITVGGTK
SIO_010081: NAREPO1_RS00045
subclass of: SO_0000673
so part of: NAREPO1_RS00045
location: 10474..11904
location: region:10474-11904:1
so has part: feature:10474-11904:1:exon

WP_130623988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10474-11904:1:exon

NAREPO1_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rsmH
locus tag: NAREPO1_RS00050
old locus tag: NAREPO1_00100
so part of: sequence
location: 11908..12864
location: region:11908-12864:1
so has part: feature:11908-12864:1:exon
subclass of: SO_0000010

position:11908:1
position: 11908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12864:1
position: 12864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12864:1:exon

NAREPO1_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rsmH
locus tag: NAREPO1_RS00050
old locus tag: NAREPO1_00100
EC number: 2.1.1.199
inference: COORDINATES: protein motif:HMM:TIGR00006.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MYTLNSHNSIMKNEVIKYLNIINNGIYIDGTFGSGGHSLIILEKLSTNSKLFVFDKDINSINIAKLIKDSRFFYKHSSFTEIKNFLNKKKLLGKVNGIIIDLGISKDQIFNSKRGFTFLKNEILDMRMDNTIGIPAFLWLKKASIKDINKVFNKFGEEYKYSKQISEYIYNYNKHNTIKYTFELIKIINLFHKKKYKRINNVTKYFQAIRIFINNELYNIKKLLSDIVDILDINGRLIIISFNSLETKIIKNFFNIKNYNINNIPLHYKDKRNFINIKNNLYMKKIIKLKPNKEEIIKNKSSRSAIMTIFEKKMILLK
SIO_010081: NAREPO1_RS00050
subclass of: SO_0000673
so part of: NAREPO1_RS00050
location: 11908..12864
location: region:11908-12864:1
so has part: feature:11908-12864:1:exon

WP_130623989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12864:1:exon

NAREPO1_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00055
old locus tag: NAREPO1_00110
so part of: sequence
location: 12873..14366
location: region:12873-14366:1
so has part: feature:12873-14366:1:exon
subclass of: SO_0000010

position:12873:1
position: 12873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14366:1
position: 14366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12873-14366:1:exon

NAREPO1_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00055
old locus tag: NAREPO1_00110
EC number: 6.3.2.13
inference: COORDINATES: protein motif:HMM:NF001126.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
translation: MNVNFLLKPWIYKNLPNINILGLEENSKKIKYMYLFFSLIGYHNDGRKFIIESIKNGASCVLIDTNLVNNHNDIIFFNKTLLIFFYNLKKYVSYISGRFYNDPSKNINFIGITGTNGKTTVSNLIFQWIKLLNNKSAIMGTLGNGFLINKIKKSNNTTLSALEIQKKIHYYKSIGIKNIISEISSHGIYQNRIKSIYFKLGIITNITHDHLDFHKNFYNYKKCKLSFLTNHKISNSIINTNDIICKKNFYLFKNASSVSIKKKNIIFNSNGWIYIENIFFSKKKTLVYFRSNFGRNKLLVNFIGNFNITNLLLAFISMLKLGYSLIDLIKTSNLLKLPIGRMEIKNIKKYNKKIIIDYAHSPDSMKKTLQNIKNIYHKNIWTVFGCSGNKDKKKRKIMGNISSKYSYKTIITNDNPKNENQYKIVNNIIENIYKKNNFYIKLNRKKAIHYAINNSQKDSIIIIFGKGHEDYQIIKNKKINYSDIHFINKIIKISDKI
SIO_010081: NAREPO1_RS00055
subclass of: SO_0000673
so part of: NAREPO1_RS00055
location: 12873..14366
location: region:12873-14366:1
so has part: feature:12873-14366:1:exon

WP_130623990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12873-14366:1:exon

NAREPO1_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murF
locus tag: NAREPO1_RS00060
old locus tag: NAREPO1_00120
so part of: sequence
location: 14353..15744
location: region:14353-15744:1
so has part: feature:14353-15744:1:exon
subclass of: SO_0000010

position:14353:1
position: 14353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15744:1
position: 15744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14353-15744:1:exon

NAREPO1_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murF
locus tag: NAREPO1_RS00060
old locus tag: NAREPO1_00120
inference: COORDINATES: protein motif:HMM:TIGR01143.1
GO function: GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MIKSNLIEISKFINGKIKKYNKNLTVNNISINSKNINKNCIFLAFKGEKYNAHDFVYESFKNGAIAIIVEKIFFDINIPQIIVKNTNIAFFKIAKLNRIKSKSYFIVITGSCGKTTVKEMVSNIIKLSNINFTYTKYNNNNIIGVSLTIIDLKINDKFVIIELGMDKLGQIFKSVKIIKPNLIFINNVFLNHIKNLKFYENVIKSKGEIFYGSNNNTKIIINYNSNYWNEWKSYFININKVPIYFSLNNCKTDFYASKINLLKFKSIFNINIYNKKIKIKLKLPGLHNISNSIAASSIAFIIGIKIKYIIKGLNNFYNIKQRLYPIYLNKNKIIINDTYNSSINSSIESINILNRLKGYKLLIIGDMLELGKLNKRSHYFLSKVINSLNINYIISYGKYSKYITNNIKNGIHIKNIKSLINIINKNIEKHRKINVLFKSSRNVGLSNILNIFLKKQTIKNFLC
SIO_010081: NAREPO1_RS00060
subclass of: SO_0000673
so part of: NAREPO1_RS00060
location: 14353..15744
location: region:14353-15744:1
so has part: feature:14353-15744:1:exon

WP_130623991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14353-15744:1:exon

NAREPO1_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: mraY
locus tag: NAREPO1_RS00065
old locus tag: NAREPO1_00130
so part of: sequence
location: 15738..16745
location: region:15738-16745:1
so has part: feature:15738-16745:1:exon
subclass of: SO_0000010

position:15738:1
position: 15738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16745:1
position: 16745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15738-16745:1:exon

NAREPO1_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: mraY
locus tag: NAREPO1_RS00065
old locus tag: NAREPO1_00130
EC number: 2.7.8.13
inference: COORDINATES: protein motif:HMM:TIGR00445.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MLINIFFVLKNIKCFLLSFLISIFFGYIYLYISKNNFNYIQKSKNINNILDKNIPTFGGVYIILSIIISILITLEINYLSLLIIISLFFYGILGFIDDFIKTYKYTNKNGLSKKYKFFFQTIITIIILFYLYMNKKEFNYTILPFFGIYNIYNNIYIYYIFLYIIIISTSNAINITDGIDGLCIKNIIYILCFFIFSSYINIKFYNFLYIDNIININLIFLGSCLSFLWFNCYPAQIFLGDTGSLSLGSSISIISILLNKEFFLLINGIIFVLETVSVIIQIIFFNFFLKKKIFLMSPLHHHYQLKKINDCKIVERLSIISIIFNIIALLSIIII
SIO_010081: NAREPO1_RS00065
subclass of: SO_0000673
so part of: NAREPO1_RS00065
location: 15738..16745
location: region:15738-16745:1
so has part: feature:15738-16745:1:exon

WP_130623992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15738-16745:1:exon

NAREPO1_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murD
locus tag: NAREPO1_RS00070
old locus tag: NAREPO1_00140
so part of: sequence
location: 16776..18101
location: region:16776-18101:1
so has part: feature:16776-18101:1:exon
subclass of: SO_0000010

position:16776:1
position: 16776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18101:1
position: 18101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16776-18101:1:exon

NAREPO1_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murD
locus tag: NAREPO1_RS00070
old locus tag: NAREPO1_00140
EC number: 6.3.2.9
inference: COORDINATES: protein motif:HMM:TIGR01087.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MKKILIIGLGKTGISCIKYFILKKYYIYLIDNNLNYNKNILKKFLNYNNIKLYIGFNKISWILQSKLIILSPGISLNFVELDMIKLYNIKIISDIEIFLNKKKNKKIIAITGSNGKSTVLNIVYNIIKKSNLNVSIGGNIGIPVLDIINEESDIYILELSSFQLEIINNSSFYISIILNITNNHIDKHINFENYKLNKLKIFNNSENCIFNNNDSNTFPKNRNINSKYITFGSFNSNYSLFYDKNNFYLYKRNIKFINCNKLKIKSKHFYLNVLASLAITDLIQNVTSKNQIDIIKNFSTLKHRLETFYFKNIRFINDSKSTNSYSTISAINSISKFNYIHLILGGYDKLNDFTILSNFIKYKNIVLYIYGVDKYKISKYFNNLLCIKNNLKSLIKIIKYNLYKNDVILFSPSCSSKDQYKSFENRGNKFIKYINEIIIKK
SIO_010081: NAREPO1_RS00070
subclass of: SO_0000673
so part of: NAREPO1_RS00070
location: 16776..18101
location: region:16776-18101:1
so has part: feature:16776-18101:1:exon

WP_130623993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16776-18101:1:exon

NAREPO1_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00075
old locus tag: NAREPO1_00150
so part of: sequence
location: 18098..19180
location: region:18098-19180:1
so has part: feature:18098-19180:1:exon
subclass of: SO_0000010

position:18098:1
position: 18098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19180:1
position: 19180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18098-19180:1:exon

NAREPO1_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00075
old locus tag: NAREPO1_00150
inference: COORDINATES: protein motif:HMM:NF016027.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
translation: MNKKIIIVSGGTAGHIIPSIIIGKELEKKKWNVYWATIKENLFIFINYKIPLYKILIINCINFRKINLFKKILFSFLLFKIIIESLIIINKIKPNLILGMGNYISFYFCISSKILNIPIIIHEQNFILGLSNKILLFFSKKVLSGFKIKKINKKIIFTGNPIRKSILNIKNIYLNINKKKGPINILILGGSQGSNFINELIIDLLIKFKLNIKIWHQTGDKNFIYFISKYKKLNLTNYLYKINGFIYNINKAFLWSDIVISRSGASIVNEISYIGLPSIFIPYPTNDNHQYFNAIYLKNKKISKIIIQSECTVNKLYKYLFNINRKILFNMSYNYNMNYLKNNNCNPNDLIISEIINYDK
SIO_010081: NAREPO1_RS00075
subclass of: SO_0000673
so part of: NAREPO1_RS00075
location: 18098..19180
location: region:18098-19180:1
so has part: feature:18098-19180:1:exon

WP_130623994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18098-19180:1:exon

NAREPO1_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murC
locus tag: NAREPO1_RS00080
old locus tag: NAREPO1_00160
so part of: sequence
location: 19170..20600
location: region:19170-20600:1
so has part: feature:19170-20600:1:exon
subclass of: SO_0000010

position:19170:1
position: 19170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20600:1
position: 20600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19170-20600:1:exon

NAREPO1_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murC
locus tag: NAREPO1_RS00080
old locus tag: NAREPO1_00160
EC number: 6.3.2.8
inference: COORDINATES: protein motif:HMM:TIGR01082.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MINNKKIHIIGVGGICMSGIAKFFLEKNFFVSGSDLKKNELIEKLEKFYKFKFYLNHNKYNIKKDLHFITYSSSIKKNNVEIKEAKKYNIPIIKRGNILNTITSNYKNIISIIGTHGKTTTTSILVNIFMYNNINPGFINGGIMKNLEINSNIGNKNYFIIESDESDLSFLKLNSNITILTSIDDDHMNSYNNNIENLKNSFIKFINKSSNRIIILCNDDNNINSIINKIKNKKIYTYGFNKFSDFIIENYKQYFNYIKFKIINKKNNLNVNIIIKNLLGKHNALNAVASFIISYIKNMNIKKTIKSLYNFKGVKNRMDLMGKFNVINYKNEIKKNITIINDYGHHYNEIYQSYITCKNINNINNVIMIFQPHRFSRIFNLFKKFIEILFKVDIIILTKIFSANEVNYNNITSNKIFNELKKINRKNIFICKKNDFIIKILLKILNNNDVILFQGAGDIHKIFKEIINNNNKFIKI
SIO_010081: NAREPO1_RS00080
subclass of: SO_0000673
so part of: NAREPO1_RS00080
location: 19170..20600
location: region:19170-20600:1
so has part: feature:19170-20600:1:exon

WP_130623995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19170-20600:1:exon

NAREPO1_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: secA
locus tag: NAREPO1_RS00085
old locus tag: NAREPO1_00170
so part of: sequence
location: 20603..23206
location: region:20603-23206:1
so has part: feature:20603-23206:1:exon
subclass of: SO_0000010

position:20603:1
position: 20603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23206:1
position: 23206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20603-23206:1:exon

NAREPO1_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: secA
locus tag: NAREPO1_RS00085
old locus tag: NAREPO1_00170
inference: COORDINATES: protein motif:HMM:NF009538.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MIKAYIKKILLNLDDYFKNKNLNRYYEVIKDINNFEKKMNNFSSKDFLDKTIEFKKRLKFNNDINKLLPEAFALVKVACNKIFNINLFDTQLIGSIILHEGKIAEMMTGEGKTISIILSAYLNSLNSNVHIVTMNDYLAKRDSENNKDVFNLLGMTVGINIPEMSIYNKKKSYKCNIVYGTGNEYVFDYLKDNMIFDIKDKIQSKLDYVIIDEIDSILIDESKIPLIISENNNVNIDIYIKINNLVKFFLYKKNNKYLYIDINYKNKTIIFNELGYRLLEKIMIKLSFINKRYELYKDNNSTILKYMINAIKVNIFFKKDIDYLVIDKNILIIDENTGRISNDRRWSNGIHQAIEAKENVFIKNENKILSSITFNNYFNLYKKISGITGTASNEKDEFKYIYNLNIVSIPTNKPVIRKDYNDLLFFTEDSKIEYIIKDIKKRLKNYQPILIGTTSIKKSELLSYFLNKNNIKHKILNAKYHKLEAEIISQAGKPKSVTISTNMAGRGTDIILGGNYKYILKKNNYDIEKKYKLKNKFKFLNSKVINSGGLHVIGTERNESRRIDNQLIGRSGRQGDPGSSQFLISIEDDLIKRFIPENIIEIIKNSSKNIDYISNSWIDKMIKSAQSKIEKNNFEIRKELILYDNIFNIQRTTLYKIRNNLLNDYQLNKIFNSINDEIVLNYIKNNITSSYSSSLDNYYNYKKIFNLIIYELKEIYPFILEIKNIFFLKNIKNLKVNLLKYITNFIHYYYNENFNFKKINYIKKIILLKVLDFFWKYHIEDIEYLKNNIFLRSYINKDPKEEFKLESFNKFNNIINNWKKYSLIIINIILYISKKNFLKQKELILKLNKYDFIINNDELFNLLNTLN
SIO_010081: NAREPO1_RS00085
subclass of: SO_0000673
so part of: NAREPO1_RS00085
location: 20603..23206
location: region:20603-23206:1
so has part: feature:20603-23206:1:exon

WP_130623996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20603-23206:1:exon

NAREPO1_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00090
old locus tag: NAREPO1_00180
so part of: sequence
location: complement(23198..23920)
location: region:23198-23920:-1
so has part: feature:23198-23920:-1:exon
subclass of: SO_0000010

position:23198:-1
position: 23198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23920:-1
position: 23920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23198-23920:-1:exon

NAREPO1_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00090
old locus tag: NAREPO1_00180
inference: COORDINATES: protein motif:HMM:NF013117.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel
translation: MKIFLNIFKIFIIMISILFLQYILLIIKKMLDNKIEDKTVNNFLILLMRYFLYILLITLALESLSFKSSSLIAMTSTLIITIGLGLKNTLSNLASGILIILLELFKKDDYIEIDKMSGFVKNIKIFTTDIITLDKNIITIPNNKFLNNSIINFLKFSQLEIKIYTKNENFIEYKKNIISILNKFKNKKKIISFDLIIEEININYTELKIKILIANAYDKEKIKSIFLNKILLKINNKNLV
SIO_010081: NAREPO1_RS00090
subclass of: SO_0000673
so part of: NAREPO1_RS00090
location: complement(23198..23920)
location: region:23198-23920:-1
so has part: feature:23198-23920:-1:exon

WP_130623997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23198-23920:-1:exon

NAREPO1_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00095
old locus tag: NAREPO1_00190
so part of: sequence
location: complement(24011..24442)
location: region:24011-24442:-1
so has part: feature:24011-24442:-1:exon
subclass of: SO_0000010

position:24011:-1
position: 24011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24442:-1
position: 24442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24011-24442:-1:exon

NAREPO1_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00095
old locus tag: NAREPO1_00190
inference: COORDINATES: protein motif:HMM:NF012241.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MKNYSIIPEFTDDIFSERFNQIDDFFSKLTGKIPVVNYPNYDIRKIDNEKYEINISVPGFSKENIEVLLKSNLLYIKGKKNIDSNKESNYIYKGIISKNFSLNFNIGNNFKIKEVFLKNGILTINLYQEISDSEKFQKILINE
SIO_010081: NAREPO1_RS00095
subclass of: SO_0000673
so part of: NAREPO1_RS00095
location: complement(24011..24442)
location: region:24011-24442:-1
so has part: feature:24011-24442:-1:exon

WP_130623998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24011-24442:-1:exon

NAREPO1_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rrf
locus tag: NAREPO1_RS00100
old locus tag: NAREPO1_00200
so part of: sequence
location: complement(24517..24628)
location: region:24517-24628:-1
so has part: feature:24517-24628:-1:exon
subclass of: SO_0000573

position:24517:-1
position: 24517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24628:-1
position: 24628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24517-24628:-1:exon

NAREPO1_RS00100
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 650377
gene: rrf
locus tag: NAREPO1_RS00100
old locus tag: NAREPO1_00200
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NAREPO1_RS00100
subclass of: SO_0000673
so part of: NAREPO1_RS00100
location: complement(24517..24628)
location: region:24517-24628:-1
so has part: feature:24517-24628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24517-24628:-1:exon

NAREPO1_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00105
old locus tag: NAREPO1_00210
so part of: sequence
location: complement(24685..27636)
location: region:24685-27636:-1
so has part: feature:24685-27636:-1:exon
subclass of: SO_0000573

position:24685:-1
position: 24685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27636:-1
position: 27636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24685-27636:-1:exon

NAREPO1_RS00105
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 650377
locus tag: NAREPO1_RS00105
old locus tag: NAREPO1_00210
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NAREPO1_RS00105
subclass of: SO_0000673
so part of: NAREPO1_RS00105
location: complement(24685..27636)
location: region:24685-27636:-1
so has part: feature:24685-27636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24685-27636:-1:exon

NAREPO1_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00110
old locus tag: NAREPO1_00220
so part of: sequence
location: complement(27690..27761)
location: region:27690-27761:-1
so has part: feature:27690-27761:-1:exon
subclass of: SO_0000663

position:27690:-1
position: 27690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27761:-1
position: 27761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27690-27761:-1:exon

NAREPO1_RS00110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00110
old locus tag: NAREPO1_00220
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(27726..27728),aa:Glu,seq:ttc)
SIO_010081: NAREPO1_RS00110
subclass of: SO_0000673
so part of: NAREPO1_RS00110
location: complement(27690..27761)
location: region:27690-27761:-1
so has part: feature:27690-27761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27690-27761:-1:exon

NAREPO1_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00115
old locus tag: NAREPO1_00230
so part of: sequence
location: complement(27824..29401)
location: region:27824-29401:-1
so has part: feature:27824-29401:-1:exon
subclass of: SO_0000573

position:27824:-1
position: 27824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29401:-1
position: 29401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27824-29401:-1:exon

NAREPO1_RS00115
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 650377
locus tag: NAREPO1_RS00115
old locus tag: NAREPO1_00230
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NAREPO1_RS00115
subclass of: SO_0000673
so part of: NAREPO1_RS00115
location: complement(27824..29401)
location: region:27824-29401:-1
so has part: feature:27824-29401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27824-29401:-1:exon

NAREPO1_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rho
locus tag: NAREPO1_RS00120
old locus tag: NAREPO1_00240
so part of: sequence
location: complement(29549..30811)
location: region:29549-30811:-1
so has part: feature:29549-30811:-1:exon
subclass of: SO_0000010

position:29549:-1
position: 29549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30811:-1
position: 30811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29549-30811:-1:exon

NAREPO1_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rho
locus tag: NAREPO1_RS00120
old locus tag: NAREPO1_00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTDLKNIDISELINLGEKFSIENISRMHKREIIFQILKYYANKGDDIFGDGVLDILQDGFGFLRSINNSYLAGPDDIYVSPSQIRKFNLRIGDTISGKIRPPKEGEKYFALLKIDEINFNKLENYKNKILFENLTPLHANSRLIMEIGDGSIEDLTTRILDISSPIGRGQRGLIVAPPKAGKTILLQSIAKSISINYPDCILIILLIDERPEEVTEMQNKISYKNVIYSTFDEPAYKHVQVAEIIIERAKRLVENKKDVIILLDSITRLTRAYNIILPSSGKILTGGIDSNALNRPKRFFGSARNTKEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKISERRIFPAIDYNKSGTRKEELLINYNDLQKMWILRKVMYPMNEIESMEFLINKLSMTKTNNDFFEMMKKS
SIO_010081: NAREPO1_RS00120
subclass of: SO_0000673
so part of: NAREPO1_RS00120
location: complement(29549..30811)
location: region:29549-30811:-1
so has part: feature:29549-30811:-1:exon

WP_130623999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29549-30811:-1:exon

NAREPO1_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00125
old locus tag: NAREPO1_00250
so part of: sequence
location: complement(30967..31037)
location: region:30967-31037:-1
so has part: feature:30967-31037:-1:exon
subclass of: SO_0000663

position:30967:-1
position: 30967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31037:-1
position: 31037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30967-31037:-1:exon

NAREPO1_RS00125
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00125
old locus tag: NAREPO1_00250
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(31003..31005),aa:Trp,seq:cca)
SIO_010081: NAREPO1_RS00125
subclass of: SO_0000673
so part of: NAREPO1_RS00125
location: complement(30967..31037)
location: region:30967-31037:-1
so has part: feature:30967-31037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30967-31037:-1:exon

NAREPO1_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00130
old locus tag: NAREPO1_00260
so part of: sequence
location: complement(31062..31135)
location: region:31062-31135:-1
so has part: feature:31062-31135:-1:exon
subclass of: SO_0000663

position:31062:-1
position: 31062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31135:-1
position: 31135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31062-31135:-1:exon

NAREPO1_RS00130
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00130
old locus tag: NAREPO1_00260
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(31099..31101),aa:Ala,seq:tgc)
SIO_010081: NAREPO1_RS00130
subclass of: SO_0000673
so part of: NAREPO1_RS00130
location: complement(31062..31135)
location: region:31062-31135:-1
so has part: feature:31062-31135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31062-31135:-1:exon

NAREPO1_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00135
old locus tag: NAREPO1_00270
so part of: sequence
location: complement(31147..31220)
location: region:31147-31220:-1
so has part: feature:31147-31220:-1:exon
subclass of: SO_0000663

position:31147:-1
position: 31147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31220:-1
position: 31220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31147-31220:-1:exon

NAREPO1_RS00135
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00135
old locus tag: NAREPO1_00270
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(31184..31186),aa:Ile,seq:gat)
SIO_010081: NAREPO1_RS00135
subclass of: SO_0000673
so part of: NAREPO1_RS00135
location: complement(31147..31220)
location: region:31147-31220:-1
so has part: feature:31147-31220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31147-31220:-1:exon

NAREPO1_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: groL
locus tag: NAREPO1_RS00140
old locus tag: NAREPO1_00280
so part of: sequence
location: complement(31274..32917)
location: region:31274-32917:-1
so has part: feature:31274-32917:-1:exon
subclass of: SO_0000010

position:31274:-1
position: 31274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32917:-1
position: 32917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31274-32917:-1:exon

NAREPO1_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: groL
locus tag: NAREPO1_RS00140
old locus tag: NAREPO1_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520752.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MTAKEVKFGNEARTKMLRGVNILADAVRVTLGPKGRNVVLDKSFGSPIITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVASGMNPMDIKRGIDKAVLAAVNELRKFSVSCSDSKSIAQVGTISANSDENVGKLISEAMERVGKEGVITVEEGSGLEDELDVVEGMQFDRGYLSPYFVNKPETNLVELDNPYVLLVDKKISNIRELLPILENIAKSNKPLLIIAEDIEGEALATLVVNTMRGIVRAVAVKAPGFGDRRKAMLEDIAILTNGTVISDEIGLNLEKVKLNDMGQSKKVIVNKDTTTIIDGIGSKLSINNRILQINRQKEEATSDYDKEKLQERIAKLSGGVAVIKVGAATEVEMKEKKSRVEDALNATKAAVEEGVVAGGGVALIRAANNISNIIGDNEDQNVGIKVAIKAMEAPLRQIVSNAGEEPSVIANKIKLGSGNLGYNASTEEYGDMISMGILDPTKVTRSALQYASSVAGLMITTECMITDIVKDDKSQEIGNNTNSINNMGGMM
SIO_010081: NAREPO1_RS00140
subclass of: SO_0000673
so part of: NAREPO1_RS00140
location: complement(31274..32917)
location: region:31274-32917:-1
so has part: feature:31274-32917:-1:exon

WP_130624000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31274-32917:-1:exon

NAREPO1_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00145
old locus tag: NAREPO1_00290
so part of: sequence
location: complement(32961..33251)
location: region:32961-33251:-1
so has part: feature:32961-33251:-1:exon
subclass of: SO_0000010

position:32961:-1
position: 32961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33251:-1
position: 33251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32961-33251:-1:exon

NAREPO1_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00145
old locus tag: NAREPO1_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006249308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MKIKPLYDKVVLKREELETKSSGGIVLTESSIGKSTRGKVISVGNGRVLDNGKVMPLSVKINDVVIFNDGYGVKSEKINGEELLILSESDILAIIE
SIO_010081: NAREPO1_RS00145
subclass of: SO_0000673
so part of: NAREPO1_RS00145
location: complement(32961..33251)
location: region:32961-33251:-1
so has part: feature:32961-33251:-1:exon

WP_130624001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32961-33251:-1:exon

NAREPO1_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00150
old locus tag: NAREPO1_00300
so part of: sequence
location: 33464..33536
location: region:33464-33536:1
so has part: feature:33464-33536:1:exon
subclass of: SO_0000663

position:33464:1
position: 33464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33536:1
position: 33536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33464-33536:1:exon

NAREPO1_RS00150
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00150
old locus tag: NAREPO1_00300
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:33497..33499,aa:Phe,seq:gaa)
SIO_010081: NAREPO1_RS00150
subclass of: SO_0000673
so part of: NAREPO1_RS00150
location: 33464..33536
location: region:33464-33536:1
so has part: feature:33464-33536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33464-33536:1:exon

NAREPO1_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaB
locus tag: NAREPO1_RS00155
old locus tag: NAREPO1_00310
so part of: sequence
location: 33589..34971
location: region:33589-34971:1
so has part: feature:33589-34971:1:exon
subclass of: SO_0000010

position:33589:1
position: 33589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34971:1
position: 34971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33589-34971:1:exon

NAREPO1_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaB
locus tag: NAREPO1_RS00155
old locus tag: NAREPO1_00310
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070303.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MIKLNSYKYFKNNTEIKKLPNSIEAEQSVIGGLIISNNKIDQVISKINKEDFFIPQHKIIFNEINNLFNQKKPVDLITLSESLERKKILKLIGGFSYLAELSKNTSNVLNIITYCEIIKEKSILRKILNIFNNISKLCYKPNYLKNNELLNLIELKISQISNKLTNNDNNPQKIENILNKTINNIKKLYNNPNNNKIIGIKTGYLELDKKTLGFQKSDLIIIAARPSMGKTTFAINLCEYSLLNDNKPVLIFSLEMSSEQIMTKILSSLTKIDHINIRTGNLTKIEWKKIFDIANILNKKKNIYIDDSSSLTTTEIRSKSKKIFRENNGINLIVIDYLQLIKTPFMYHNRTLEITEISRFLKSLAKELNIPIITISQLNRSLEQRSNKRPINSDLRESGSIEQDADLIMFLYREEIYKENDNKKGGGITEIIISKHRNGPIGLIKLIFNNKFSRFDNLKN
SIO_010081: NAREPO1_RS00155
subclass of: SO_0000673
so part of: NAREPO1_RS00155
location: 33589..34971
location: region:33589-34971:1
so has part: feature:33589-34971:1:exon

WP_130624002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33589-34971:1:exon

NAREPO1_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00160
old locus tag: NAREPO1_00320
so part of: sequence
location: 34977..35855
location: region:34977-35855:1
so has part: feature:34977-35855:1:exon
subclass of: SO_0000010

position:34977:1
position: 34977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35855:1
position: 35855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34977-35855:1:exon

NAREPO1_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00160
old locus tag: NAREPO1_00320
inference: COORDINATES: protein motif:HMM:NF014759.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-3' exonuclease H3TH domain-containing protein
translation: MIKINNDRNKNIFLMDGTLYLYRSYYKFLNLFNSKNILISVIQGMIYIINKIINNYNPKYLLIIYDYPCKNFRKISYNEYKKNRSSCPKDLINQIPIVNEIINNMGILTISIPSVESDDIIGTLSKQCKRNGFNVYIITIDKDMIQLMSKKVHIFDILSNKIFNPNDIYLKYNVNYYNIIDYFSLVGDSSDNIPGIYGIGPKTASILIQKYKNIYNIYKNINEIYNIKNLKNPKKIIKNLCKNKKKLMLFYNLIKIKTDIFIGYKINDFIIKNKNILNLNKLLKKYEILDLY
SIO_010081: NAREPO1_RS00160
subclass of: SO_0000673
so part of: NAREPO1_RS00160
location: 34977..35855
location: region:34977-35855:1
so has part: feature:34977-35855:1:exon

WP_130624003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34977-35855:1:exon

NAREPO1_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00165
old locus tag: NAREPO1_00330
so part of: sequence
location: 35964..36398
location: region:35964-36398:1
so has part: feature:35964-36398:1:exon
subclass of: SO_0000010

position:35964:1
position: 35964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36398:1
position: 36398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35964-36398:1:exon

NAREPO1_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00165
old locus tag: NAREPO1_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011283149.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix DNA-binding protein
translation: MNKVIDVYSIVEILFNIYNKLKKEINKNLINDGLSISKMKILRFINSKKTSATDIKNYMEFSSRTIVTVLDSLEKENLLYRKQSKQDRRIKYVYITEKGLKKLKLAEIKHKIILNKSFSSLTKMQIENFYEICESIENKNKISN
SIO_010081: NAREPO1_RS00165
subclass of: SO_0000673
so part of: NAREPO1_RS00165
location: 35964..36398
location: region:35964-36398:1
so has part: feature:35964-36398:1:exon

WP_130624004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35964-36398:1:exon

NAREPO1_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: tilS
locus tag: NAREPO1_RS00170
old locus tag: NAREPO1_00340
so part of: sequence
location: 36492..37928
location: region:36492-37928:1
so has part: feature:36492-37928:1:exon
subclass of: SO_0000010

position:36492:1
position: 36492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37928:1
position: 37928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36492-37928:1:exon

NAREPO1_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: tilS
locus tag: NAREPO1_RS00170
old locus tag: NAREPO1_00340
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MKKISYNYFLNKIENEVFNKIKFYIKKFNLINFVVLFSGGLDSTVLIYIFNKIKNICPINIKVLHINHNINNNSILYSNHCLNFCKKLNLKIKILNININKELIKKFGYEYSYRISRLNIIKKNINKKNDILVTAHHKNDQIETLFLFLDRISGLNGLSGIKSYNKIFNIKIIRPLLKFKKIELFEYIKKNNIQYIYDITNKDINIKRNFIRHKLISNIENIYPKFIDSIYKSMIIINNQYLLLYFLIKKNLKKILNNDKKILDIKIIKKNIYNEIHFFYLIKDWLSKIYNIYINIKKSNIIYKKILYDDNINNKKITSLQINNNNFIIKYNNFFHLIKKPRINKRYILLYKENNILYLPENMGHIIFNKNINEKNKNYIYTKVNKNFFYEKITIQFFTISFKEKVFFHKNKIKIKDIFNKYKIPYLIRKQIPLLFYNEKLISILNLFVINNINNKNNDFIYIKWFNSPIKKYLYNII
SIO_010081: NAREPO1_RS00170
subclass of: SO_0000673
so part of: NAREPO1_RS00170
location: 36492..37928
location: region:36492-37928:1
so has part: feature:36492-37928:1:exon

WP_130624005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36492-37928:1:exon

NAREPO1_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: proS
locus tag: NAREPO1_RS00175
old locus tag: NAREPO1_00350
so part of: sequence
location: 37934..39622
location: region:37934-39622:1
so has part: feature:37934-39622:1:exon
subclass of: SO_0000010

position:37934:1
position: 37934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39622:1
position: 39622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37934-39622:1:exon

NAREPO1_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: proS
locus tag: NAREPO1_RS00175
old locus tag: NAREPO1_00350
EC number: 6.1.1.15
inference: COORDINATES: protein motif:HMM:TIGR00409.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MKSKEYLFLTLKNYKNSKYNEIHNLMVKLGIIRQLSSGIYSWLPTGKAILDKIFNYIKFEMNKIKCLEMLIPILQSEEIWKNNKKYKIYKSELIITKKVNNKKFILSPTNEEIILYLIKKEINNINLPLKIFQIQSKFRNEIRINKGILRTKEFIMKDAYSFHNSYKCLNNTYNIFKNTYKKIFNKFNIKTFAIKTKNNNGIIKENLSHEFHSISEYGDNKIIICKKTNKAEIFKNSKKIYKHYILTPKENIKYISYNYKSYNYILNKICLEKFIKVFIFYANTNLIKSKFIALAIKFKDSLSINKIKENISSYIRFPIKLASKDDIVKIFKGNVEIIGMLNLKNIPIIIDYNVAILSDFITSININKILIHGLNWNNKFIKIKEVSDISNNNSLKKKLIIKKSIEIAHIFKLNNNIIKTNNGNKKNIFMGSYGIGISRLLFLTIEKNLNINDIKLPYILSPFKISIIPINYYKNKFVYDISNKLYIFLNKKYINNIILENRNISFGKSFKDHYLLGTSTIIIISEKYIKLNLIEIIYKNNKKILQLDFNIILKFIKKHSHM
SIO_010081: NAREPO1_RS00175
subclass of: SO_0000673
so part of: NAREPO1_RS00175
location: 37934..39622
location: region:37934-39622:1
so has part: feature:37934-39622:1:exon

WP_130624006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37934-39622:1:exon

NAREPO1_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00180
old locus tag: NAREPO1_00360
so part of: sequence
location: complement(39600..40949)
location: region:39600-40949:-1
so has part: feature:39600-40949:-1:exon
subclass of: SO_0000010

position:39600:-1
position: 39600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40949:-1
position: 40949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39600-40949:-1:exon

NAREPO1_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00180
old locus tag: NAREPO1_00360
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF012492.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MKNIDNFLDLGLKNDFSKIFNKINYKKPFLIQKLCIPYILDNFDILSIANTGSGKTAAFVIPIIDKINKNINYIQVLILSPTREIVIQTKHVIDTFSKYLKWINSLSIYGGKNFIMQKNDLKKIQHIIISTPGRLIDHINKKNIDLSKVSILVIDEFDEMFKMGFIEDIKKINSYIPKNRQTLLFSATLKNEIKLKVKSFVNLNKFKEIIINDKNNLSITQYYYIINSLKNKKDILVNFINNINYKTIIVFVNKKIDTINLYNFLKQFYNCYYISSDVSQFKREKIIKIFILQKYNNCILIATDIISRGLDIKNVDWIINFDFPNNKDIYIHRIGRTGRANNFGKSLSLIYYKNDIKILNELKKDNLKLINFKLDNIINNNIENKINNIYKYIIKKYLCNNLNDNNFIIKNDNLKKLFSLINIENYEKLSLILLDIIIDKKIFTYENVS
SIO_010081: NAREPO1_RS00180
subclass of: SO_0000673
so part of: NAREPO1_RS00180
location: complement(39600..40949)
location: region:39600-40949:-1
so has part: feature:39600-40949:-1:exon

WP_130624007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39600-40949:-1:exon

NAREPO1_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00185
old locus tag: NAREPO1_00370
so part of: sequence
location: complement(40964..43048)
location: region:40964-43048:-1
so has part: feature:40964-43048:-1:exon
subclass of: SO_0000010

position:40964:-1
position: 40964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43048:-1
position: 43048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40964-43048:-1:exon

NAREPO1_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00185
old locus tag: NAREPO1_00370
EC number: 2.7.7.8
inference: COORDINATES: protein motif:HMM:NF008805.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MFNSQSVKINYGNNILIIQSDVIAKKSNSSILLKINNTVILITVVIGNKVYNDYFFPLTINYYEKLYSSGKFPGGFLKREIRQTENEIIISRLIDRSIRSLFNKDYLYETDVTVTLLSHDNNIMPDVISIIGVSIAIKKILNESFNGPIFACRIGYINNNFIFNPSYLDLQNSELDIIFSSTMDSIIMIESSSKLLNKDIILNSINYGLEYKNIFLNNLKKIFFNTDYIYININFNPVYQIMKFIFYKELFYLYKNIKDKNIFDENMNKIKSRVIYYINKLSALNINVILFNFENLKKDIFRSIILKFKKRIDERNFDDIRNINSNISILPSVHGSSLFTRGETQALVSVTLGNEKDSQIIETVYDNKNYYDKFIFHYNFPSYCVGETGFHTFPRRREIGHGKLAKKSILPIIPNEIDFPYTIRVVSEIIESNGSSSMASVCGASLALMDAGVPIKSIIAGIAMGIIINKEENIILTDISGIEDSYGDIDFKVSGNGNEITAIQMDIKTNNIINISIINLLLIDANKAIKKIISHIKSIIPIYKNNLSDLVPKIKIIKIDQNKISNIIGKNGNVIKDIINKTNTNIDINDNGTIKISSNNLNDINNAIIYIKDIVSDIIKNNIYHGIILNIISIGILVSIKNNKKGIIKKTYLNKVYNNINYSNKFFIGQKIFVKVENVDYKTGKIYLNLNKKI
SIO_010081: NAREPO1_RS00185
subclass of: SO_0000673
so part of: NAREPO1_RS00185
location: complement(40964..43048)
location: region:40964-43048:-1
so has part: feature:40964-43048:-1:exon

WP_130624008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40964-43048:-1:exon

NAREPO1_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsO
locus tag: NAREPO1_RS00190
old locus tag: NAREPO1_00380
so part of: sequence
location: complement(43074..43337)
location: region:43074-43337:-1
so has part: feature:43074-43337:-1:exon
subclass of: SO_0000010

position:43074:-1
position: 43074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43337:-1
position: 43337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43074-43337:-1:exon

NAREPO1_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsO
locus tag: NAREPO1_RS00190
old locus tag: NAREPO1_00380
inference: COORDINATES: protein motif:HMM:TIGR00952.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MLKKKYINLDNLKIINNKNCGLVETQLINLTNKIKKIHLHCIKNKKDFHSNRGLIFKISKRRKLLKYLKKNSLIRYNNILSFLDLKK
SIO_010081: NAREPO1_RS00190
subclass of: SO_0000673
so part of: NAREPO1_RS00190
location: complement(43074..43337)
location: region:43074-43337:-1
so has part: feature:43074-43337:-1:exon

WP_130624009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43074-43337:-1:exon

NAREPO1_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00195
old locus tag: NAREPO1_00390
so part of: sequence
location: complement(43370..43726)
location: region:43370-43726:-1
so has part: feature:43370-43726:-1:exon
subclass of: SO_0000010

position:43370:-1
position: 43370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43726:-1
position: 43726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43370-43726:-1:exon

NAREPO1_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00195
old locus tag: NAREPO1_00390
inference: COORDINATES: protein motif:HMM:NF014130.2
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-binding factor A
translation: MYNNYNIRINKLENKIKRKIILIIEKYINDSRFKKINIIRTKLNINNLEIKIFFVLLSNINIEYIINILNNSSNFIRKKLFKILNIKFIPKLVFLYDYKFYESVKIINLINSLKYKNY
SIO_010081: NAREPO1_RS00195
subclass of: SO_0000673
so part of: NAREPO1_RS00195
location: complement(43370..43726)
location: region:43370-43726:-1
so has part: feature:43370-43726:-1:exon

WP_130624010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43370-43726:-1:exon

NAREPO1_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00200
old locus tag: NAREPO1_00400
so part of: sequence
location: complement(43749..45245)
location: region:43749-45245:-1
so has part: feature:43749-45245:-1:exon
subclass of: SO_0000010

position:43749:-1
position: 43749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45245:-1
position: 45245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43749-45245:-1:exon

NAREPO1_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00200
old locus tag: NAREPO1_00400
inference: COORDINATES: protein motif:HMM:NF012239.2
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP-binding protein
translation: MKLRPPIITIIGHIDHGKTSIIDYLNKTNIIKNEKGNITQNILAYKININGESFVFIDTPGHNYFIEMREKSINITDIIILVISSNEGIKKQTIESINYIKNFNIPTIIVITKVDIGFNNINKIKNDLTKYNIIDKNIGGMYDFVYISIKNNYGIKDFLNLIIKYKNNIINKLTFNDKKLDAYIIELFNNKNGTVLYVITKNGYIKTGDILLFDNNYSKIKYIKNEYFIKTDKTFPSLPYYLYGFSNISNVYDNNLIYIKDIKEAKKKILNYNKNNSIYINDNKNNTLLNNDNLDFKKNNLIKLNYIIKCNNYGSYKAIKLFTDSLINNYKNIINTINISIGNINKNDIMLSLYSKFKILGFNINLNNKELNVIKKKNIFFKNYFIIYDLLDYINNEVNNILIQISKINYSKGLAEVVDVFLISKNNTILGCKILDGKIKVNSLVRIKRKNVILYDKIIINSIRIYKKNVIEVLKNTECGICIKKKININKKDIIESN
SIO_010081: NAREPO1_RS00200
subclass of: SO_0000673
so part of: NAREPO1_RS00200
location: complement(43749..45245)
location: region:43749-45245:-1
so has part: feature:43749-45245:-1:exon

WP_130624011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43749-45245:-1:exon

NAREPO1_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00205
old locus tag: NAREPO1_00410
so part of: sequence
location: complement(45258..46283)
location: region:45258-46283:-1
so has part: feature:45258-46283:-1:exon
subclass of: SO_0000010

position:45258:-1
position: 45258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46283:-1
position: 46283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45258-46283:-1:exon

NAREPO1_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00205
old locus tag: NAREPO1_00410
inference: COORDINATES: protein motif:HMM:NF020118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NusA N-terminal domain-containing protein
translation: MINKKILSFIESLSNEKSIDKNTIFNILEISIEESIKKKEKDFNIKVIFDKNSGDFSIFKIFKIVNIVNDFKKEISIKNSFLINKNLKLNDYLYEKLELSYLNNRVISELTKQNIINKIKEIERKNLLNNFKKNIGNILIGKIKKIYKKKIILDVGYEFDAILYYNHMLFNDNYFIDKKIKIIIYNINIKKYNNDLIFLASRSHTNMLSKLIKDNIYEFKNNIFNIKYIYRNPGIKSKIVIVSKYNEIKTYNIYKKIENKINKISNELNGELIDIILWSYNIKKFIKNVFFPIKIVRFKIYENNIFIYIKKKNLSKILEKKNINLKLIYKLFNKNININTL
SIO_010081: NAREPO1_RS00205
subclass of: SO_0000673
so part of: NAREPO1_RS00205
location: complement(45258..46283)
location: region:45258-46283:-1
so has part: feature:45258-46283:-1:exon

WP_130624012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45258-46283:-1:exon

NAREPO1_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00210
old locus tag: NAREPO1_00420
so part of: sequence
location: complement(46397..46469)
location: region:46397-46469:-1
so has part: feature:46397-46469:-1:exon
subclass of: SO_0000663

position:46397:-1
position: 46397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46469:-1
position: 46469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46397-46469:-1:exon

NAREPO1_RS00210
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00210
old locus tag: NAREPO1_00420
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(46434..46436),aa:Met,seq:cat)
SIO_010081: NAREPO1_RS00210
subclass of: SO_0000673
so part of: NAREPO1_RS00210
location: complement(46397..46469)
location: region:46397-46469:-1
so has part: feature:46397-46469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46397-46469:-1:exon

NAREPO1_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01225
old locus tag: NAREPO1_00430
so part of: sequence
location: complement(46530..46613)
location: region:46530-46613:-1
so has part: feature:46530-46613:-1:exon
subclass of: SO_0000663

position:46530:-1
position: 46530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46613:-1
position: 46613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46530-46613:-1:exon

NAREPO1_RS01225
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS01225
old locus tag: NAREPO1_00430
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(46576..46578),aa:Leu,seq:aag)
SIO_010081: NAREPO1_RS01225
subclass of: SO_0000673
so part of: NAREPO1_RS01225
location: complement(46530..46613)
location: region:46530-46613:-1
so has part: feature:46530-46613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46530-46613:-1:exon

NAREPO1_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00215
so part of: sequence
location: complement(46613..46825)
location: region:46613-46825:-1
so has part: feature:46613-46825:-1:exon
subclass of: SO_0000010

position:46825:-1
position: 46825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46613-46825:-1:exon

NAREPO1_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLLFNNLVKILSILLILIIFFQKINKKNELNNDKYILKNRNKLLSNLDKIILFIIIFYFLIILIVSIFY
SIO_010081: NAREPO1_RS00215
subclass of: SO_0000673
so part of: NAREPO1_RS00215
location: complement(46613..46825)
location: region:46613-46825:-1
so has part: feature:46613-46825:-1:exon

WP_130624013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46613-46825:-1:exon

NAREPO1_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ftsH
locus tag: NAREPO1_RS00220
old locus tag: NAREPO1_00440
so part of: sequence
location: complement(46874..48679)
location: region:46874-48679:-1
so has part: feature:46874-48679:-1:exon
subclass of: SO_0000010

position:46874:-1
position: 46874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48679:-1
position: 48679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46874-48679:-1:exon

NAREPO1_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ftsH
locus tag: NAREPO1_RS00220
old locus tag: NAREPO1_00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126390.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MTDLIKNFIIWLFISLILMFLFQNFNFNLYNNEKVDYSTFMYELNQDQIKEVNINGREISVTRKDRNHYITYIPIYDSKLLNILLDKNVKIVGEPTQENSIFTTIFISWFPMILLIIVWIFFIKQINSGNKNIFSFGKNKAKIFLENEIKTTFNDIEGCDEAKEEVREIVEFLKEPLFFKKLGGKIPKGILMIGPPGTGKTLLARAVAGESKVPFFNISGSDFVEMFVGVGASRVRDMFDQAKKISPCIIFIDEIDAVGRQRGSGLGGGHDEREQTLNQILVEMDGFNKNENVIIIAATNRPDVLDKALLRPGRFDRRIFVGLPDISGREKILKIHMKNVPLDLDVNCNTIARSTSGFSGADLANLVNEASLIAAKNKKSMVSMEDFEFAKDKLILGSERKSMIISDIQKEFTAYHESGHVIVGMIVPNYDPIHKVTIIPHGQALGITSFLPKEDLLSIDKEKLESKISTLYGGRLAEEIIYGKNKISTGSQNDIKVATDIARNMVIKWGYSDILGPLYIEDNDNNDILFNKNMKNKLISEETHKIIDKEIKKIIDKNYNRAKSILINNIDILHKMKEALIKHETLNSIQINDLMNRKKII
SIO_010081: NAREPO1_RS00220
subclass of: SO_0000673
so part of: NAREPO1_RS00220
location: complement(46874..48679)
location: region:46874-48679:-1
so has part: feature:46874-48679:-1:exon

WP_130624014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46874-48679:-1:exon

NAREPO1_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00225
old locus tag: NAREPO1_00450
so part of: sequence
location: complement(48719..49309)
location: region:48719-49309:-1
so has part: feature:48719-49309:-1:exon
subclass of: SO_0000010

position:48719:-1
position: 48719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49309:-1
position: 49309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48719-49309:-1:exon

NAREPO1_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00225
old locus tag: NAREPO1_00450
inference: COORDINATES: protein motif:HMM:NF013856.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RlmE family RNA methyltransferase
translation: MIKKKYLNDFYYKKSKKLNLRSRSWFKIYEINNKFNLFKKYMNVIDLGSSPGGWSLFLSKYIKVNSIYACDIIYMKSLYNVNFFKGDLNNINDYNNFINFIKHDKVNAVISDMLSNTSGFKLIDNYNNINFLNIAFKISLKKLLKGGFLITKFLQNPNINLFIKKISLYFNEIKIFKPNSSKSFSREFYIIAKNFL
SIO_010081: NAREPO1_RS00225
subclass of: SO_0000673
so part of: NAREPO1_RS00225
location: complement(48719..49309)
location: region:48719-49309:-1
so has part: feature:48719-49309:-1:exon

WP_130624015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48719-49309:-1:exon

NAREPO1_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: greA
locus tag: NAREPO1_RS00230
old locus tag: NAREPO1_00460
so part of: sequence
location: complement(49340..49819)
location: region:49340-49819:-1
so has part: feature:49340-49819:-1:exon
subclass of: SO_0000010

position:49340:-1
position: 49340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49819:-1
position: 49819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49340-49819:-1:exon

NAREPO1_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: greA
locus tag: NAREPO1_RS00230
old locus tag: NAREPO1_00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874341.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MKNNIPMTVYGEKVLKEELIFLKNVKRPKIIKEISDARKHGDLKENFEYQYAKEQQLLCENRIKEIENKLLNAIVIDIKKISFCNRVIFGSTILIENTNDNKIYKYCIVGEDEADINKNKISIFSPIAKSFIGKKINSIVKINTPNGLKEYKLLKIEYI
SIO_010081: NAREPO1_RS00230
subclass of: SO_0000673
so part of: NAREPO1_RS00230
location: complement(49340..49819)
location: region:49340-49819:-1
so has part: feature:49340-49819:-1:exon

WP_130624016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49340-49819:-1:exon

NAREPO1_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00235
old locus tag: NAREPO1_00470
so part of: sequence
location: complement(49849..50856)
location: region:49849-50856:-1
so has part: feature:49849-50856:-1:exon
subclass of: SO_0000010

position:49849:-1
position: 49849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50856:-1
position: 50856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49849-50856:-1:exon

NAREPO1_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00235
old locus tag: NAREPO1_00470
inference: COORDINATES: protein motif:HMM:NF013205.2
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKFLDNIIINIKAGNGGNGCLSFSKKNKFNKSKPDGGNGGDGGNIYICSSELKYCLLNFYNKKYIYGKNGLNGSRNSKSGKKGEDIIIYVPIGTTLINFETKEVIYNLYKKNIKILIAKGGKKGLGNKSFKSSIKRSPKIFTKGKLGEYKIIQFKLMLISDIGIFGLINSGKSSLFKIITKINNIKISNYKFTTIYPRIGVIKNNYKNLLLLDTPGIIFENKFKITKSKYLYHLNSCKLLLHVINISILYDKYIKFDKYLHSILKEFKINNINLQDKVIWIIFNKLDLYNFDDVKYKIDKLFNIFKLKFNYYIISSINYNLNIDKLIKNIYNFFK
SIO_010081: NAREPO1_RS00235
subclass of: SO_0000673
so part of: NAREPO1_RS00235
location: complement(49849..50856)
location: region:49849-50856:-1
so has part: feature:49849-50856:-1:exon

WP_130624017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49849-50856:-1:exon

NAREPO1_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmA
locus tag: NAREPO1_RS00240
old locus tag: NAREPO1_00480
so part of: sequence
location: complement(50853..51125)
location: region:50853-51125:-1
so has part: feature:50853-51125:-1:exon
subclass of: SO_0000010

position:50853:-1
position: 50853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51125:-1
position: 51125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50853-51125:-1:exon

NAREPO1_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmA
locus tag: NAREPO1_RS00240
old locus tag: NAREPO1_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011644711.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAAGSTKNGRDSVGKRLGIKKFGLQIVKSGNIIVRQRGTKIKPGVNVGCGKDYTLYSLVYGRVLFNKSRKKTFVSVIPLYKDINKL
SIO_010081: NAREPO1_RS00240
subclass of: SO_0000673
so part of: NAREPO1_RS00240
location: complement(50853..51125)
location: region:50853-51125:-1
so has part: feature:50853-51125:-1:exon

WP_130624018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50853-51125:-1:exon

NAREPO1_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplU
locus tag: NAREPO1_RS00245
old locus tag: NAREPO1_00490
so part of: sequence
location: complement(51134..51442)
location: region:51134-51442:-1
so has part: feature:51134-51442:-1:exon
subclass of: SO_0000010

position:51134:-1
position: 51134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51442:-1
position: 51442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51134-51442:-1:exon

NAREPO1_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplU
locus tag: NAREPO1_RS00245
old locus tag: NAREPO1_00490
inference: COORDINATES: protein motif:HMM:NF013025.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYVVVDIFSKQFLLEENNIICLNRLNYPINSKIEINKILLINDNNNLIIGDPYIKNRKVIILILNHFRSEKIKIIKFKRRKHQLKKFNFRNIFTKIKILNII
SIO_010081: NAREPO1_RS00245
subclass of: SO_0000673
so part of: NAREPO1_RS00245
location: complement(51134..51442)
location: region:51134-51442:-1
so has part: feature:51134-51442:-1:exon

WP_130624019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51134-51442:-1:exon

NAREPO1_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmE
locus tag: NAREPO1_RS00250
old locus tag: NAREPO1_00500
so part of: sequence
location: complement(51466..51672)
location: region:51466-51672:-1
so has part: feature:51466-51672:-1:exon
subclass of: SO_0000010

position:51466:-1
position: 51466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51672:-1
position: 51672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51466-51672:-1:exon

NAREPO1_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmE
locus tag: NAREPO1_RS00250
old locus tag: NAREPO1_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003788541.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKNIHPKKFDIVVTCSCSNKFNIKSTISNDFNIDVCYKCHSFYTGKIKFIDNIGRIGKFNKKYKNLF
SIO_010081: NAREPO1_RS00250
subclass of: SO_0000673
so part of: NAREPO1_RS00250
location: complement(51466..51672)
location: region:51466-51672:-1
so has part: feature:51466-51672:-1:exon

WP_130624020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51466-51672:-1:exon

NAREPO1_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmG
locus tag: NAREPO1_RS00255
old locus tag: NAREPO1_00510
so part of: sequence
location: complement(51724..51882)
location: region:51724-51882:-1
so has part: feature:51724-51882:-1:exon
subclass of: SO_0000010

position:51724:-1
position: 51724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51882:-1
position: 51882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51724-51882:-1:exon

NAREPO1_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmG
locus tag: NAREPO1_RS00255
old locus tag: NAREPO1_00510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672449.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MSKKNKKIIKLISTQSKHFYIKKKCNKSKILNLSLKKFDPNIRKHILYILEK
SIO_010081: NAREPO1_RS00255
subclass of: SO_0000673
so part of: NAREPO1_RS00255
location: complement(51724..51882)
location: region:51724-51882:-1
so has part: feature:51724-51882:-1:exon

WP_130624021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51724-51882:-1:exon

NAREPO1_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmB
locus tag: NAREPO1_RS00260
old locus tag: NAREPO1_00520
so part of: sequence
location: complement(51893..52114)
location: region:51893-52114:-1
so has part: feature:51893-52114:-1:exon
subclass of: SO_0000010

position:51893:-1
position: 51893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52114:-1
position: 52114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51893-52114:-1:exon

NAREPO1_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmB
locus tag: NAREPO1_RS00260
old locus tag: NAREPO1_00520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070207.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MFCLITKKKTTIGNNRSNSMKSTKRKFYPNIHNKKVWISSKLKFIKLKLSSKALRILAKNGIEKTLSKFKIKY
SIO_010081: NAREPO1_RS00260
subclass of: SO_0000673
so part of: NAREPO1_RS00260
location: complement(51893..52114)
location: region:51893-52114:-1
so has part: feature:51893-52114:-1:exon

WP_130624022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51893-52114:-1:exon

NAREPO1_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: trpS
locus tag: NAREPO1_RS00265
old locus tag: NAREPO1_00530
so part of: sequence
location: complement(52125..53096)
location: region:52125-53096:-1
so has part: feature:52125-53096:-1:exon
subclass of: SO_0000010

position:52125:-1
position: 52125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53096:-1
position: 53096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52125-53096:-1:exon

NAREPO1_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: trpS
locus tag: NAREPO1_RS00265
old locus tag: NAREPO1_00530
EC number: 6.1.1.2
inference: COORDINATES: protein motif:HMM:TIGR00233.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MDKLILFSGIQPSGDLTLGNYISVLSQWINMQDSFKCFFCIADLHALTNKVFDTNKFIFNIISVLISLDININDNILFLQSSVAEHLKLFWIFSSILKFNKIKKIYKFEKDNFNKNVSYYIYSILMTSDILLYNSNIVPIGLDQIKNVSLSKYIANKFNNLYGNIFNIPKFSINSNYIMSLSNPRKKMSKSDNYYSYISLLDNKESIRNKINKCITDSNNPPIIKYDIKNKPGISNLIYIIHKLTNISISEIECEFKNKNYFVFKKYVVDIIFKKLYNIQKKYYIIRDNESYLKKILINGNKNANKIALDRFNIINNLFKKNI
SIO_010081: NAREPO1_RS00265
subclass of: SO_0000673
so part of: NAREPO1_RS00265
location: complement(52125..53096)
location: region:52125-53096:-1
so has part: feature:52125-53096:-1:exon

WP_130624023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52125-53096:-1:exon

NAREPO1_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00270
old locus tag: NAREPO1_00540
so part of: sequence
location: 53154..53672
location: region:53154-53672:1
so has part: feature:53154-53672:1:exon
subclass of: SO_0000010

position:53154:1
position: 53154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53672:1
position: 53672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53154-53672:1:exon

NAREPO1_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00270
old locus tag: NAREPO1_00540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499814.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MNKKSINNTKDFYVTIEIPKGNFVKYEINKKNNNIYVDRFINAPIPYPFNYGYINNTLSLDNDYLDSVIISKYKIYPNSIMLCRSIGMLLMEDESGIDNKIICVPSNNISKDYKNINNIYDISNNYLNKIKFFFKYYKKMDSNKWSKIICFKDKKESYKEIFNSIERFKKNK
SIO_010081: NAREPO1_RS00270
subclass of: SO_0000673
so part of: NAREPO1_RS00270
location: 53154..53672
location: region:53154-53672:1
so has part: feature:53154-53672:1:exon

WP_130624024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53154-53672:1:exon

NAREPO1_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: asd
locus tag: NAREPO1_RS00275
old locus tag: NAREPO1_00550
so part of: sequence
location: complement(53683..54501)
location: region:53683-54501:-1
so has part: feature:53683-54501:-1:exon
subclass of: SO_0000010

position:53683:-1
position: 53683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54501:-1
position: 54501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53683-54501:-1:exon

NAREPO1_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: asd
locus tag: NAREPO1_RS00275
old locus tag: NAREPO1_00550
EC number: 4.1.1.65
inference: COORDINATES: protein motif:HMM:TIGR00163.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archaetidylserine decarboxylase
translation: MILEKIKKKINKFIFYISNKNLGIINILFIKIYILIFKININEYEKNINEYNSFNDFFCRKLKNNRIINNNNNIIISPVDGLITKIGKIDYKNNVFIKGKNYSLYNIVQDINCINYFNNGNYIIIYLSPSNYHRIHMIYNGFIKKMIYTTGNLNTVNTNSYLGSYSKLFQNERVSCLLKTNFGYVLKIFIGSIIVGNIYLNWHGIVNKNYSTESGIWDYNNNGFFFKKGDEIGKFMLGSSIMLIFQNNKKIKFYKNIKENNKILFGDILIKM
SIO_010081: NAREPO1_RS00275
subclass of: SO_0000673
so part of: NAREPO1_RS00275
location: complement(53683..54501)
location: region:53683-54501:-1
so has part: feature:53683-54501:-1:exon

WP_130624025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53683-54501:-1:exon

NAREPO1_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: orn
locus tag: NAREPO1_RS00280
old locus tag: NAREPO1_00560
so part of: sequence
location: 54650..55195
location: region:54650-55195:1
so has part: feature:54650-55195:1:exon
subclass of: SO_0000010

position:54650:1
position: 54650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55195:1
position: 55195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54650-55195:1:exon

NAREPO1_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: orn
locus tag: NAREPO1_RS00280
old locus tag: NAREPO1_00560
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392464.1
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoribonuclease
translation: MLKNNNNLIWIDLEMTGLNPNTCKIIEIATIITDYNLNILAKGPEYTIYQSSKYLSLMDKWNINTHTNSGLIHKVKNSLINEEEAEEKTLEFLSKWVDFKKSPMCGNNVSHDRKFLIKYMPKLENYFHYHHVDVNSIKELVKRWKPEILNNFKKKNKHRALIDIYESIEELIFYRKYFIYS
SIO_010081: NAREPO1_RS00280
subclass of: SO_0000673
so part of: NAREPO1_RS00280
location: 54650..55195
location: region:54650-55195:1
so has part: feature:54650-55195:1:exon

WP_130624190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54650-55195:1:exon

NAREPO1_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: miaA
locus tag: NAREPO1_RS00285
old locus tag: NAREPO1_00570
so part of: sequence
location: 55207..56145
location: region:55207-56145:1
so has part: feature:55207-56145:1:exon
subclass of: SO_0000010

position:55207:1
position: 55207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56145:1
position: 56145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55207-56145:1:exon

NAREPO1_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: miaA
locus tag: NAREPO1_RS00285
old locus tag: NAREPO1_00570
EC number: 2.5.1.75
inference: COORDINATES: protein motif:HMM:TIGR00174.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MKKLPILFIIGQTASGKTDLSIKIKSIFPSLIEIVNMDSLSIYRDMNIGTAKVSKEILDKYPHKLINIRDPSQNYSVKEYYKDAINVINMCHINKKIPLFCGGSMFYFNTLINGISEYNMVNFTKVKTFINYKFSNYIDNKKIFNNVNNIYKKFKNNNEYKNIYKIKKILSIFITQGFIKYNFKKLNKKYNLYKFCILNNKDNIEKIIKNRFFKMIKNGFENEVRILYNRGDLNIENNKSIRSIGYKEMWLYLLGKISYKSFIEKTIKSNMILIKNQNKWIKKIKKNLLFMENNELYNKKIINIIYNIKNNI
SIO_010081: NAREPO1_RS00285
subclass of: SO_0000673
so part of: NAREPO1_RS00285
location: 55207..56145
location: region:55207-56145:1
so has part: feature:55207-56145:1:exon

WP_130624026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55207-56145:1:exon

NAREPO1_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00290
old locus tag: NAREPO1_00580
so part of: sequence
location: 56185..56907
location: region:56185-56907:1
so has part: feature:56185-56907:1:exon
subclass of: SO_0000010

position:56185:1
position: 56185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56907:1
position: 56907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56185-56907:1:exon

NAREPO1_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00290
old locus tag: NAREPO1_00580
inference: COORDINATES: protein motif:HMM:NF013324.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MKCVYNLVNKFITNYNKIYNNIFFYISFLLIIIVFFWFIKGFYIIKKNEKATILRFGKYYNIKNSGINWIIYGIDNVKIINTKNINNINSLNLIFTKDENLIYIKTNIKYSIIDLKKYLININNIKFNINNIIDSIILENSNKFSFNELLDNNKKKILKEIFLKNINLKINELDIGINIIEVDIKKIYPPEEIKKYIYNNTLLIEKFKLENKKKIEEYNNYIKYKFNIYSIIINNKIKSL
SIO_010081: NAREPO1_RS00290
subclass of: SO_0000673
so part of: NAREPO1_RS00290
location: 56185..56907
location: region:56185-56907:1
so has part: feature:56185-56907:1:exon

WP_172597197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56185-56907:1:exon

NAREPO1_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00295
old locus tag: NAREPO1_00590
so part of: sequence
location: 56956..57681
location: region:56956-57681:1
so has part: feature:56956-57681:1:exon
subclass of: SO_0000010

position:56956:1
position: 56956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57681:1
position: 57681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56956-57681:1:exon

NAREPO1_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00295
old locus tag: NAREPO1_00590
inference: COORDINATES: protein motif:HMM:NF013324.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MKVNYKKFFIFIFLILIIKKSLFIIPEENIGICSRLGKILKNNKNEYIIFNPGLNIKIPYIDKIEIINKNLQIIHDKVKCETIDKKNIIVNYYIKYKIFNINSYYKNTENNYYVIENVLKNKTNIFLKDKISSLYTKNILNNLNLILKKKNIFYDKNINKILLFGIDGIDIKIYKIILDDDFYKYICDKMKLEQKKIFNKNILKIKLKHIKNKINIYYKYKNKMLKLNKLYNLQKKYYKYQ
SIO_010081: NAREPO1_RS00295
subclass of: SO_0000673
so part of: NAREPO1_RS00295
location: 56956..57681
location: region:56956-57681:1
so has part: feature:56956-57681:1:exon

WP_130624028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56956-57681:1:exon

NAREPO1_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00300
old locus tag: NAREPO1_00600
so part of: sequence
location: 57792..58568
location: region:57792-58568:1
so has part: feature:57792-58568:1:exon
subclass of: SO_0000010

position:57792:1
position: 57792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58568:1
position: 58568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57792-58568:1:exon

NAREPO1_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00300
old locus tag: NAREPO1_00600
inference: COORDINATES: protein motif:HMM:NF012797.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA methyltransferase
translation: MNNIVYGFHNINYFLNVKKELIDIFFLYKNINIKENLKLKVILNKINYLNIPIKFVNKKYITNLIGEKLKKNNQNFCIKIKNNISYSFDKIKLLNFINNNNNKKLFIILENIKDSRNLGSCIRNADAAGINIVLITKKNSSSLNNYGTNISSSGAINNLNIMKFNDIKYILNIFKKNKIKIVSTSDKSNNIIYNNNLKLPIVYIFGSEDKGITEISKKYSDLIVKIPTYGYINSINVSVAVGICLFESIRQTFFINKF
SIO_010081: NAREPO1_RS00300
subclass of: SO_0000673
so part of: NAREPO1_RS00300
location: 57792..58568
location: region:57792-58568:1
so has part: feature:57792-58568:1:exon

WP_130624029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57792-58568:1:exon

NAREPO1_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsF
locus tag: NAREPO1_RS00305
old locus tag: NAREPO1_00610
so part of: sequence
location: 58594..58914
location: region:58594-58914:1
so has part: feature:58594-58914:1:exon
subclass of: SO_0000010

position:58594:1
position: 58594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58914:1
position: 58914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58594-58914:1:exon

NAREPO1_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsF
locus tag: NAREPO1_RS00305
old locus tag: NAREPO1_00610
inference: COORDINATES: protein motif:HMM:TIGR00166.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRYYEIMILINPIFQNKIDEIIINYSEIINNNLGKIYKFEKIGIRDLCYPIKKNNKAYFLLTNIQCNVNIIKVIENLIKTNEIIIRYLILKIKNPTNKFSKLYKYE
SIO_010081: NAREPO1_RS00305
subclass of: SO_0000673
so part of: NAREPO1_RS00305
location: 58594..58914
location: region:58594-58914:1
so has part: feature:58594-58914:1:exon

WP_130624030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58594-58914:1:exon

NAREPO1_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsR
locus tag: NAREPO1_RS00310
old locus tag: NAREPO1_00620
so part of: sequence
location: 58907..59143
location: region:58907-59143:1
so has part: feature:58907-59143:1:exon
subclass of: SO_0000010

position:58907:1
position: 58907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59143:1
position: 59143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58907-59143:1:exon

NAREPO1_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsR
locus tag: NAREPO1_RS00310
old locus tag: NAREPO1_00620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354276.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MNNKNNIRKKIYRKKNIIIDYKDINLLNKYVSECYKILPSKTTGTKLKYQHKISKSIKIARFLSLIPYTDKQTIKIKK
SIO_010081: NAREPO1_RS00310
subclass of: SO_0000673
so part of: NAREPO1_RS00310
location: 58907..59143
location: region:58907-59143:1
so has part: feature:58907-59143:1:exon

WP_130624031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58907-59143:1:exon

NAREPO1_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplI
locus tag: NAREPO1_RS00315
old locus tag: NAREPO1_00630
so part of: sequence
location: 59180..59641
location: region:59180-59641:1
so has part: feature:59180-59641:1:exon
subclass of: SO_0000010

position:59180:1
position: 59180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59641:1
position: 59641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59180-59641:1:exon

NAREPO1_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplI
locus tag: NAREPO1_RS00315
old locus tag: NAREPO1_00630
inference: COORDINATES: protein motif:HMM:TIGR00158.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MINLILVKNFNNLGKKGDFIKVKNGYAFNYLIPYKICILKDDKNINKIFLEEDKKKEINNKNLISLNNLINKIKLLKYSININVKSNKNGKLFGSINKKNIFILLNNIENVNFLKEKNIIIYNNKIQKIGNYKIFIKKFNIKFSFNLNILNKN
SIO_010081: NAREPO1_RS00315
subclass of: SO_0000673
so part of: NAREPO1_RS00315
location: 59180..59641
location: region:59180-59641:1
so has part: feature:59180-59641:1:exon

WP_130624032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59180-59641:1:exon

NAREPO1_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00320
old locus tag: NAREPO1_00640
so part of: sequence
location: complement(59649..60398)
location: region:59649-60398:-1
so has part: feature:59649-60398:-1:exon
subclass of: SO_0000010

position:59649:-1
position: 59649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60398:-1
position: 60398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59649-60398:-1:exon

NAREPO1_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00320
old locus tag: NAREPO1_00640
inference: COORDINATES: protein motif:HMM:NF013214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MFNDIYKDSNSNSYDVYCSELIHKFILKVYCWMSFGLFITSLVSFYVSKSSYLLYFLHDNILFFIILSFIQLYIMFVLSNYTKELSENNIITLFIMYSILTGINLSTVFLIYTSYEISYSFLSILITFILMSIYGYFSKSNLIKLNNILLMFLLGIFISSIINIYFSNYLFEWIISYISIFIFIGLIIIDTKKIKNLGSKLIYNEDYLLINKYSILGALILYLDFINLFLIPLKIIKNNNNNNNKKEKK
SIO_010081: NAREPO1_RS00320
subclass of: SO_0000673
so part of: NAREPO1_RS00320
location: complement(59649..60398)
location: region:59649-60398:-1
so has part: feature:59649-60398:-1:exon

WP_130624033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59649-60398:-1:exon

NAREPO1_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rodA
locus tag: NAREPO1_RS00325
old locus tag: NAREPO1_00650
so part of: sequence
location: complement(60492..61574)
location: region:60492-61574:-1
so has part: feature:60492-61574:-1:exon
subclass of: SO_0000010

position:60492:-1
position: 60492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61574:-1
position: 61574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60492-61574:-1:exon

NAREPO1_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rodA
locus tag: NAREPO1_RS00325
old locus tag: NAREPO1_00650
inference: COORDINATES: protein motif:HMM:TIGR02210.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MNKKITIDYILILLIYFILMFSMIILFSSSNKDINILKKLIFNIIISNLVMILISKIDKRKLENYSILIYLISILFLVIVHIYGKNIKGAKRWIKIGYFIFQPSEFIKISNNLICSYFIKKFGCPNSNISLFYYLFILLLPVFFIFIQPDLGTSIILLISGLFILFISGINFEFIKKILLFFTILSILSWKLFMKNYQKNRIISLFKNIDNYSTGYHIMQSKIAIGSGGFFGKGLFKGTQNKFKFVPENNTDFIFSVIGEEFGLLGIMLLITLYLIIIYRMICISYKTNDIFSKILISSFIFTFFLNIIINISMTIGILPVVGIPLPLISYGGSSLLSNFIKIGIILSINSSIEDFEINF
SIO_010081: NAREPO1_RS00325
subclass of: SO_0000673
so part of: NAREPO1_RS00325
location: complement(60492..61574)
location: region:60492-61574:-1
so has part: feature:60492-61574:-1:exon

WP_130624034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60492-61574:-1:exon

NAREPO1_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: mrdA
locus tag: NAREPO1_RS00330
old locus tag: NAREPO1_00660
so part of: sequence
location: complement(61577..63424)
location: region:61577-63424:-1
so has part: feature:61577-63424:-1:exon
subclass of: SO_0000010

position:61577:-1
position: 61577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63424:-1
position: 63424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61577-63424:-1:exon

NAREPO1_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: mrdA
locus tag: NAREPO1_RS00330
old locus tag: NAREPO1_00660
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:TIGR03423.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MIFYNKNYKKCNLSVFNKRIIIFVFLSIISILIIIIRLFYIQVINFNKYYSRSYNNCTKKILLNTKRGFIFDKNNIILAKNITVFKLVIYKNNNLKNDIINISKLINLSKDDINEINLLKNEDCKKKLIILSKDFSLIDIKNFLVNKYLFPNIKIKKKYIRHYPFKNICSHSIGYISRINNKELNKYNHKKKIYNVDDYIGKIGIEKKYEKYLKGKNGFKEIKINNLGKILGLRKTSLPLYGNDVYTSLDINLSIYVRNLIKKSKSAVIISDINGKILSLVSNPDFDLNKFSKKITNEEYKNILNNNSCPMLNRATQGIYPPASTVKPYILISSLNKKIIRENDLIFDDSTWTMPKFYKVYNDWNKNGRGWINLYNAIEESSDIYFYNLAYICGIDNIYDFMSNFEYNKKTGIDIEENNGNLPNEYWKKKVFKNKWLDGDTISVGIGQGYWYSTPIQMLKSLIILLNNGLIKKPVILDYIYDYNIDNIININNNIKNKYIKYKINIKYFNLVKNSMYNVAHGKNGTLKNSFLNSKYKIGSKTGTAQLFSLQNNKIYDEKKLPIDLRDHKMIVAFAPFDNPKFILTIILENGGLENYNIGYITRKIFDYLILKTDK
SIO_010081: NAREPO1_RS00330
subclass of: SO_0000673
so part of: NAREPO1_RS00330
location: complement(61577..63424)
location: region:61577-63424:-1
so has part: feature:61577-63424:-1:exon

WP_130624035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61577-63424:-1:exon

NAREPO1_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rsfS
locus tag: NAREPO1_RS00335
old locus tag: NAREPO1_00670
so part of: sequence
location: complement(63411..63779)
location: region:63411-63779:-1
so has part: feature:63411-63779:-1:exon
subclass of: SO_0000010

position:63411:-1
position: 63411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63779:-1
position: 63779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63411-63779:-1:exon

NAREPO1_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rsfS
locus tag: NAREPO1_RS00335
old locus tag: NAREPO1_00670
inference: COORDINATES: protein motif:HMM:TIGR00090.1
GO function: GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0017148 - negative regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome silencing factor
translation: MFKKITFLKIYMVLNIRNIIKFIKKLEVKDISLFHVYNKFIIIDYILICTTNSENHSKFIYKEIYKNFKYNINKKLEFDINFKWILIDLNDIILNVMQKNTRNIYNLDNIYKRNYIKIDDIL
SIO_010081: NAREPO1_RS00335
subclass of: SO_0000673
so part of: NAREPO1_RS00335
location: complement(63411..63779)
location: region:63411-63779:-1
so has part: feature:63411-63779:-1:exon

WP_130624036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63411-63779:-1:exon

NAREPO1_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00340
old locus tag: NAREPO1_00680
so part of: sequence
location: complement(63764..64723)
location: region:63764-64723:-1
so has part: feature:63764-64723:-1:exon
subclass of: SO_0000010

position:63764:-1
position: 63764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64723:-1
position: 64723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63764-64723:-1:exon

NAREPO1_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00340
old locus tag: NAREPO1_00680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDIILNLKYKNYIFFCKDLYIINVLKSNIIKILSIKKKIINKFILNDIEDCNDLYLNIRSNNIFDIKKIYIITIDKKEIFLFLLKYIKEYKNCILLIICIFFIKNLLFLKKNKLFIIKNYIINNYKTFTNFLIKYNYISLKDNKNKYLNLNILKWLYYLYNNNINIIIILINIFIKKKNIIKNILKNDLIIIDIYNFCYIYSLIIFNYKLFIISLLIIKKNFYSKSYEFLIIISNFLESIIYIKLGINKNIYYINNINNKFDKNDIIFFLKNINYNNLLNILIIIKNIEYNRIMNNNFENEIIWNSLEKLSYVLCLKK
SIO_010081: NAREPO1_RS00340
subclass of: SO_0000673
so part of: NAREPO1_RS00340
location: complement(63764..64723)
location: region:63764-64723:-1
so has part: feature:63764-64723:-1:exon

WP_130624037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63764-64723:-1:exon

NAREPO1_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: leuS
locus tag: NAREPO1_RS00345
old locus tag: NAREPO1_00690
so part of: sequence
location: complement(64744..67209)
location: region:64744-67209:-1
so has part: feature:64744-67209:-1:exon
subclass of: SO_0000010

position:64744:-1
position: 64744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67209:-1
position: 67209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64744-67209:-1:exon

NAREPO1_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: leuS
locus tag: NAREPO1_RS00345
old locus tag: NAREPO1_00690
EC number: 6.1.1.4
inference: COORDINATES: protein motif:HMM:TIGR00396.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MKLYNHKIIEKFVQNFWKKFNTFKVSNDKTLKKYYCLSMFPYPSGKLHIGHIRSYTIGDIFARFNRMNGKNVLFPIGWDSFGLPAENAAIENNLSPKKWTFNNINYMRKQLKLLGFSFDWDKEIITCNENYYKWEQFLFKKLYKKKIIYKKYSSVNWCNKDKTVLANEQVINNKCWRCNNYVSIKFIKQWFIKITNYSDELLNNINKLKFWPKEVKNMQKKWIGKNKWIVIKFNLINLNNKEIIINFKNIYDFLNIKFIFISLKNKLSKYILSFIMNKKNIKLYNNNVIEHIKKYGYIKTNILAINNLINRFININIIDSNYMIYIYKNKIYNNKLIDINLKNYLFFLNKKKYKNEKILYEDILYNTYSISNNIMRDDNILKINFNFKKTYTYNLKDWCISRQRNWGVPIPMATKNDKIVEIPDIYLPIKVKNYYSNDKEKIYINNNIFYLENDTLDTFIQSSWYYIRFTCNKSKYLVNKENVDYWLPIDQYIGGIEHATSHLLYFRFYNKLLRDLNFIKYDEPAIKLLCQGMVLSESYYYINKKNNIIWVPFYEIKKKIENNNIKYFDKNNNEIFYNGLCKMSKSKNNGINPSEIIEKYGADTLRVFIISLAPVNKNIIWKENNIIGIYKFLNKLWSLVLIHLNNKKINLNKKKNYLYLNKEFFNKIKNITFDIEKKQTLNTSISNIIKLTNIIYNIIINDKYNYNYDIINNFIKTLIKLLYPFAPHISFILWNKLGMSNIDFEKWPDYNNYSYIEKENTYLIYINNKYKFKIHFKKYINNKKIIKIINKLNNFKLFIKDKKIKNTYINNEKKIINFLLF
SIO_010081: NAREPO1_RS00345
subclass of: SO_0000673
so part of: NAREPO1_RS00345
location: complement(64744..67209)
location: region:64744-67209:-1
so has part: feature:64744-67209:-1:exon

WP_130624038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64744-67209:-1:exon

NAREPO1_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ybeY
locus tag: NAREPO1_RS00350
old locus tag: NAREPO1_00700
so part of: sequence
location: complement(67238..67684)
location: region:67238-67684:-1
so has part: feature:67238-67684:-1:exon
subclass of: SO_0000010

position:67238:-1
position: 67238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67684:-1
position: 67684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67238-67684:-1:exon

NAREPO1_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ybeY
locus tag: NAREPO1_RS00350
old locus tag: NAREPO1_00700
inference: COORDINATES: protein motif:HMM:TIGR00043.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MSVKLNIIFNKVRKNNYFPTKIDIFNIINYLIINNNNTYNICLYITNNKEITKLNNIYKNINRSTNILTFNSKIYYFKKKILFCDIIMSKDKIEEESKIYNIKLYLYWIHIITHGFLHILGYTHKNNIDNYIMKNKELFILKKFKLKK
SIO_010081: NAREPO1_RS00350
subclass of: SO_0000673
so part of: NAREPO1_RS00350
location: complement(67238..67684)
location: region:67238-67684:-1
so has part: feature:67238-67684:-1:exon

WP_130624039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67238-67684:-1:exon

NAREPO1_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: cysS
locus tag: NAREPO1_RS00355
old locus tag: NAREPO1_00710
so part of: sequence
location: 67739..68896
location: region:67739-68896:1
so has part: feature:67739-68896:1:exon
subclass of: SO_0000010

position:67739:1
position: 67739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68896:1
position: 68896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67739-68896:1:exon

NAREPO1_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: cysS
locus tag: NAREPO1_RS00355
old locus tag: NAREPO1_00710
EC number: 6.1.1.16
inference: COORDINATES: protein motif:HMM:TIGR00435.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MLKIFDTYSKKKKIFINNDNLIKIYVCGITPYSYCHIGHIRTFLIFDIIIRYLKYLNYKIIYVRNITDIDDKIIKKSIDKKINVIKLTKYFIKKNNIIFNKFNITKPNYEPKVTDNIKYIIDNIKILIKNKNAFIDKNGDVIFNTSSYNYYGKLSNRKTNNNFVLWKLNNNNKNELLWKSPWGYGRPGWHIECSVISNKILGDQIDIHGGGYDLLFPHHENEIAQSNCLYKNFNIKYWIHIGTVNVKNNKISKSLNNYIGINKLLNKFNINTIRYYLTKKKYEKPINFNISKIEKSNIELDKINIFFSNKYLNKTEINLKKKTIIKKKYIFNKFIDYMNDDFNIPKIYDLLFNTIKNIKNRNIENKYLYNILKEVKLIMKILGFK
SIO_010081: NAREPO1_RS00355
subclass of: SO_0000673
so part of: NAREPO1_RS00355
location: 67739..68896
location: region:67739-68896:1
so has part: feature:67739-68896:1:exon

WP_130624040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67739-68896:1:exon

NAREPO1_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00360
old locus tag: NAREPO1_00720
so part of: sequence
location: complement(68897..68980)
location: region:68897-68980:-1
so has part: feature:68897-68980:-1:exon
subclass of: SO_0000663

position:68897:-1
position: 68897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68980:-1
position: 68980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68897-68980:-1:exon

NAREPO1_RS00360
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00360
old locus tag: NAREPO1_00720
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(68944..68946),aa:Leu,seq:taa)
SIO_010081: NAREPO1_RS00360
subclass of: SO_0000673
so part of: NAREPO1_RS00360
location: complement(68897..68980)
location: region:68897-68980:-1
so has part: feature:68897-68980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68897-68980:-1:exon

NAREPO1_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00365
old locus tag: NAREPO1_00740
so part of: sequence
location: complement(69069..69141)
location: region:69069-69141:-1
so has part: feature:69069-69141:-1:exon
subclass of: SO_0000663

position:69069:-1
position: 69069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69141:-1
position: 69141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69069-69141:-1:exon

NAREPO1_RS00365
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00365
old locus tag: NAREPO1_00740
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(69106..69108),aa:Gly,seq:gcc)
SIO_010081: NAREPO1_RS00365
subclass of: SO_0000673
so part of: NAREPO1_RS00365
location: complement(69069..69141)
location: region:69069-69141:-1
so has part: feature:69069-69141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69069-69141:-1:exon

NAREPO1_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaX
locus tag: NAREPO1_RS00370
old locus tag: NAREPO1_00750
so part of: sequence
location: complement(69193..70308)
location: region:69193-70308:-1
so has part: feature:69193-70308:-1:exon
subclass of: SO_0000010

position:69193:-1
position: 69193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70308:-1
position: 70308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69193-70308:-1:exon

NAREPO1_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaX
locus tag: NAREPO1_RS00370
old locus tag: NAREPO1_00750
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR02397.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MYDNLYTKWRPNTFNDIIGQKNIVKYFKNAIFFKKIHHSYIFTGYNGIGKTTIARLLVKSINCININELLIKSNNFPCNTCENCILINENKFYDYIEIDAAIKNSIDDIKLLLENIIYYPIKSKYKIYLIDEIHILSKQGFSALLKSLEEPPNYIKFILATNDIKKIPENILSRCIVLNFEKISICDIVKRLVFILDNENIKYTKKSLYNISIFSNGSIRNSLNILEQCILISNNNTINIDIVNKILNICDINLLLDIINSIVINNICLFNKCINYINKYTFNYNNIFINIINILHILFMLKIDKNYIINPILYSENDIKKILYISNNASIKNLNLFIKYLFKYNKYINYYFNEKIGFNLFFIRIFYIINN
SIO_010081: NAREPO1_RS00370
subclass of: SO_0000673
so part of: NAREPO1_RS00370
location: complement(69193..70308)
location: region:69193-70308:-1
so has part: feature:69193-70308:-1:exon

WP_130624041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69193-70308:-1:exon

NAREPO1_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aroC
locus tag: NAREPO1_RS00375
old locus tag: NAREPO1_00760
so part of: sequence
location: complement(70341..71411)
location: region:70341-71411:-1
so has part: feature:70341-71411:-1:exon
subclass of: SO_0000010

position:70341:-1
position: 70341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71411:-1
position: 71411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70341-71411:-1:exon

NAREPO1_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aroC
locus tag: NAREPO1_RS00375
old locus tag: NAREPO1_00760
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004243753.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MSGNSFGKIFKVSTFGESHGIALGGIIDGMPPKFYLSESDIQKELDRRKPGNSKYTSYRKENDKIEILSGLYNGMTTGASIGILVKNNDFKSEDYNNIKDIYRPGHADYTYSIKYGHRDYRGGGRSSARETVIRVAAGAIAKKYLKNVFNTEIKGYISQIGNINCEFLDWKYINLNDFFCPNDYIINDLSNLINKLRENGDSIGAKVSVVITNVPYGLGEPVFDKLDADLSHAIMSINAVKGIEIGDGFNVIYQKGSENRDNMSSKGFLSNHSGGILGGISTGQDILINVAIKPTSSISIEGNTIDKYGNDVKILVKGRHDPCVGIRAVPVIESMISIVLMDHVLRYRSQCNSLLK
SIO_010081: NAREPO1_RS00375
subclass of: SO_0000673
so part of: NAREPO1_RS00375
location: complement(70341..71411)
location: region:70341-71411:-1
so has part: feature:70341-71411:-1:exon

WP_130624042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70341-71411:-1:exon

NAREPO1_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00380
old locus tag: NAREPO1_00770
so part of: sequence
location: 71592..72089
location: region:71592-72089:1
so has part: feature:71592-72089:1:exon
subclass of: SO_0000010

position:71592:1
position: 71592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72089:1
position: 72089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71592-72089:1:exon

NAREPO1_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00380
old locus tag: NAREPO1_00770
inference: COORDINATES: protein motif:HMM:NF012787.2
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redoxin domain-containing protein
translation: MSIVNKQAPNFIASAILKNNKIVNNFNFKNYLNKKIGILFFWPMSFLNIYLEEMIFFNKNYNKLLENNAKIIGISCDSEFANLKWKNIIKKNNKIGNINFPIVSDKKREIIRFYNIENENTGMALKSIFIIDKCNIIRFELIQYNIFFKINIISILNIINFLNKK
SIO_010081: NAREPO1_RS00380
subclass of: SO_0000673
so part of: NAREPO1_RS00380
location: 71592..72089
location: region:71592-72089:1
so has part: feature:71592-72089:1:exon

WP_130624043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71592-72089:1:exon

NAREPO1_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rnpB
locus tag: NAREPO1_RS00385
old locus tag: NAREPO1_00780
so part of: sequence
location: 72107..72472
location: region:72107-72472:1
so has part: feature:72107-72472:1:exon
subclass of: SO_0000011

position:72107:1
position: 72107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72472:1
position: 72472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72107-72472:1:exon

NAREPO1_RS00385
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 650377
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: NAREPO1_RS00385
old locus tag: NAREPO1_00780
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NAREPO1_RS00385
subclass of: SO_0000673
so part of: NAREPO1_RS00385
location: 72107..72472
location: region:72107-72472:1
so has part: feature:72107-72472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72107-72472:1:exon

NAREPO1_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00390
old locus tag: NAREPO1_00790
so part of: sequence
location: 72510..73082
location: region:72510-73082:1
so has part: feature:72510-73082:1:exon
subclass of: SO_0000010

position:72510:1
position: 72510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73082:1
position: 73082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72510-73082:1:exon

NAREPO1_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00390
old locus tag: NAREPO1_00790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFIILKLFVILSLFLNGINKTFYTISFSLITKFILDNRNLKNKIKNNILKNKIIFLIKKNKKINNIKISIILNNNILLILGNINNIKNLKIIENILNNNINNDINIYNKTICKKSNYISEINDILLKFKIYKNIIINKKIYLLKNKIYVHNNKIYIFIFKNDIKNLNNLNEILNNFKNNKIFFNKNIIF
SIO_010081: NAREPO1_RS00390
subclass of: SO_0000673
so part of: NAREPO1_RS00390
location: 72510..73082
location: region:72510-73082:1
so has part: feature:72510-73082:1:exon

WP_130624044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72510-73082:1:exon

NAREPO1_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsI
locus tag: NAREPO1_RS00395
old locus tag: NAREPO1_00800
so part of: sequence
location: complement(73072..73467)
location: region:73072-73467:-1
so has part: feature:73072-73467:-1:exon
subclass of: SO_0000010

position:73072:-1
position: 73072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73467:-1
position: 73467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73072-73467:-1:exon

NAREPO1_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsI
locus tag: NAREPO1_RS00395
old locus tag: NAREPO1_00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091473.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MKNYFYGTGKRKNAISRVFIKNGNGNFVINNKKIDIFCRNNFIKENIIIYPIKIVNLDLKKFDILITVKGGGEFGQIYSIRHGISKALLNYDINYKSILKKNKLITRDSRKVERKKFGFKKSRKRIQFSKR
SIO_010081: NAREPO1_RS00395
subclass of: SO_0000673
so part of: NAREPO1_RS00395
location: complement(73072..73467)
location: region:73072-73467:-1
so has part: feature:73072-73467:-1:exon

WP_130624045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73072-73467:-1:exon

NAREPO1_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplM
locus tag: NAREPO1_RS00400
old locus tag: NAREPO1_00810
so part of: sequence
location: complement(73479..73916)
location: region:73479-73916:-1
so has part: feature:73479-73916:-1:exon
subclass of: SO_0000010

position:73479:-1
position: 73479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73916:-1
position: 73916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73479-73916:-1:exon

NAREPO1_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplM
locus tag: NAREPO1_RS00400
old locus tag: NAREPO1_00810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013755901.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MFFNESFTKTISNDKKKWYILDANNYILGRLASKISIILQGKHKSNYKNNIDNGDYIIVINSSKIIFSGNKLNKKKYYRHSGYIGNLKTYILKDLFLKNSNLVLINAVKNMLPRNKLKKIFINKLKVYKYSNHNHISQNPTIIKI
SIO_010081: NAREPO1_RS00400
subclass of: SO_0000673
so part of: NAREPO1_RS00400
location: complement(73479..73916)
location: region:73479-73916:-1
so has part: feature:73479-73916:-1:exon

WP_130624046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73479-73916:-1:exon

NAREPO1_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00405
old locus tag: NAREPO1_00820
so part of: sequence
location: 74051..75406
location: region:74051-75406:1
so has part: feature:74051-75406:1:exon
subclass of: SO_0000010

position:74051:1
position: 74051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75406:1
position: 75406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74051-75406:1:exon

NAREPO1_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00405
old locus tag: NAREPO1_00820
inference: COORDINATES: protein motif:HMM:NF012318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MKYLKFKLILIIIYFFINSKNLAYSYFLNNSLSNIVDETSPSVVSIYTINRKKIYIDIPKEFKFFFGENIFNKRNYNKKYFEGLGSGVIIDSKNKYIITNNHVVNNASKIKIKFYDGKEFDANIIGNDYIYDIALLKVNIKNSNYLLKEIKFCNSDLIKVGDLAIAIGNPFGLGQTVTSGIVSALGRKGLNIINGLENFIQTDASINKGNSGGALLNVKGELIGINTAILTPNGCNIGIGFAIPSNTIKKLSTQLIKYGNIKRGYIGIKCIELNNKTSNILKTNIINGIFVNEVIKNSPAEKYGIRSGDVIVTINNKKINNLFELKSLINLTFINEILKFKILRNNKFKIIHLKLCKNKNKHKKTIYPMFNEIFLKKILKNKNKLIKIIDIKNNSKLYKIGIRKNDFIIKINNFVINNIRQLKKIVNDKIVINYIYILRNGNKILFFIKNN
SIO_010081: NAREPO1_RS00405
subclass of: SO_0000673
so part of: NAREPO1_RS00405
location: 74051..75406
location: region:74051-75406:1
so has part: feature:74051-75406:1:exon

WP_130624047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74051-75406:1:exon

NAREPO1_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murA
locus tag: NAREPO1_RS00410
old locus tag: NAREPO1_00830
so part of: sequence
location: complement(75393..76661)
location: region:75393-76661:-1
so has part: feature:75393-76661:-1:exon
subclass of: SO_0000010

position:75393:-1
position: 75393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76661:-1
position: 76661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75393-76661:-1:exon

NAREPO1_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murA
locus tag: NAREPO1_RS00410
old locus tag: NAREPO1_00830
EC number: 2.5.1.7
inference: COORDINATES: protein motif:HMM:TIGR01072.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MKKIFVYGGNKVNGDVKISGSKNSSLSIIISSLLSNEDILIKNIPNIKDINVLLKILKLLGSKINFINSNLYINNKNINKNIIPLYLSKLIRSSINIIPSILLRFGEVKISFPGGCNFCKRPIDLHIKVFKDFNIKIINLNKKYIELKMFKKITNKKIYIKKISVGVTLNAIFLSVLSYGKFIINNVSTEPEVIDTINFLNTIGANINIINNTLIIYGVKKLYGGVYKVLSDRIETGTFLLSCVLNKGSLYCLNTNNKYLTKIIDVLKISGANIKTGNDYIYISMYKKHKPVTFSSNVYPEFPTDLQPIFTNLNIINNNKISYITENIFFNRFSHVNELINMGANIKILSNFKILCTGVNNIFGKTIYAKDLRCSMSLILAGTYAIGQSVIIDKGDYIDRGYENIFYKLKSIGINILYFNYF
SIO_010081: NAREPO1_RS00410
subclass of: SO_0000673
so part of: NAREPO1_RS00410
location: complement(75393..76661)
location: region:75393-76661:-1
so has part: feature:75393-76661:-1:exon

WP_130624048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75393-76661:-1:exon

NAREPO1_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00415
old locus tag: NAREPO1_00840
so part of: sequence
location: 76769..78022
location: region:76769-78022:1
so has part: feature:76769-78022:1:exon
subclass of: SO_0000010

position:76769:1
position: 76769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78022:1
position: 78022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76769-78022:1:exon

NAREPO1_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00415
old locus tag: NAREPO1_00840
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MKKKKINNKIYDNKIFDLINKEYIRQKNQINLIASESYSSIDVMKAQGSCLTNKYSEGYPNKRYYEGCKYVDEIEKIAIMRAKKIFDCDYVNVQPHSGSQANLAVYNSLLNIGDTVLSMDLKHGGHLTHGSIFNISSKLYNFKYYKLNKKGEINYNNIYKLSKLYKPKMIIAGSSSFSGIIDWKKISNIAKKFNSYFFVDMSHIAGLVAAKIYPNPIYFADIVSSTTHKTLSGPRGGIILSKNKDISFYNKIDKSVFPGIQGGPLMHVIAAKAICFKEAMSNKYIIYQKNIIKNIKQMANIFKNRNIKLVSDSIESNLLLLDLRKYNLTGLEISNILNNYNIIVNKNLIPNDKLNSNITSGIRIGTTSITRRNITPKYINIITNIICNIITDIKYRNKINNNFKKIIYNICKKFPIY
SIO_010081: NAREPO1_RS00415
subclass of: SO_0000673
so part of: NAREPO1_RS00415
location: 76769..78022
location: region:76769-78022:1
so has part: feature:76769-78022:1:exon

WP_130624049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76769-78022:1:exon

NAREPO1_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00420
old locus tag: NAREPO1_00850
so part of: sequence
location: 78196..79689
location: region:78196-79689:1
so has part: feature:78196-79689:1:exon
subclass of: SO_0000010

position:78196:1
position: 78196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79689:1
position: 79689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78196-79689:1:exon

NAREPO1_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00420
old locus tag: NAREPO1_00850
EC number: 3.4.11.1
inference: COORDINATES: protein motif:HMM:NF002074.0
GO function: GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl aminopeptidase
translation: MKINLISNKEFNENINYRKSVFSYVFDNENFEYNNKLICNEYIKKIIKKELFYNKLKYKNIILYDINDLKLDNLIIIKCINNLEFDDYEYKILIKKFINILIDTNINECSCLLTLIPVINRDYNWKIRITTKIIKDNIYKFDRFKKDNIKINIKKINLILSDDNDFEYLNNILNEINIITDAINLTKNLSNLPSNICNPLYISEKCKELSLNNRDILYENIDKKKMESLGMNAYLSVSMGSNNPIMSILKYNGCKNNFKNPIVLIGKGITFDTGGISLKNSYNMDEMKFDMCGAASVYGIIYAINKLKLNINVIGILSLSENLIDKKSYRPGDIVKTMSGKTVEIINTDAEGRLILCDSITYSYKFNPSIIIDIATLTGACIISLGNNFSGLISNNDFESNEIIVASNEIDDKVWRLPLIKDNQNQINSNIADIKNLGDGKCGTITAACFLFNFIKKNSIWIHLDIAGTAYDENKKSTGRPVYLLTQFLINKSKNIR
SIO_010081: NAREPO1_RS00420
subclass of: SO_0000673
so part of: NAREPO1_RS00420
location: 78196..79689
location: region:78196-79689:1
so has part: feature:78196-79689:1:exon

WP_130624050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78196-79689:1:exon

NAREPO1_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00425
old locus tag: NAREPO1_00860
so part of: sequence
location: 79696..82161
location: region:79696-82161:1
so has part: feature:79696-82161:1:exon
subclass of: SO_0000010

position:79696:1
position: 79696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82161:1
position: 82161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79696-82161:1:exon

NAREPO1_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00425
old locus tag: NAREPO1_00860
EC number: 6.1.1.9
inference: COORDINATES: protein motif:HMM:NF004349.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MKIEKNFEISIYNYWEKNNIFKNKNSNNNNYSMILPPPNITGKLHIGHTFQQTIMDFLIRFNKMNGKNVLWQPGLDHAGIATQILIEKKFNKENFKNNKKFLIKKTKSFKNELDISILNQMKSLGNFINWKNIRFTMDKDFKKSVKYAFIKLYNNQLIYKDKKIVNWDIKLKTAISDLEVSYKNITCDSFFIKYKLLNSNKNVIVFVNELEKILGTTAIVTNNIELFNSFKNNKAILPIVNRIIPIIFDKHVNESNGNFINLIPGHNINHFDLAIKHNLQIIDIFSNNGKIKKYIDIIDKNKKFIYIMKLPKILYNLNITNCRKKILDLLNSLNIIEKKISDKLNIPFNNRNNSYVIQKITDQWFIKTNTLLKNSINFIKNKKIKFIQKNYEKIYLKYISSMKDWCISRQIWWGHRIPAWYDKDKNIYVGKNKKDLFNKYNLNKNIKLYKDKNVLDTWFSSSIFSFASLGWPKKTLKFKLFHPTNIIITGYDIIFFWISRMIMMTSFLLKDEKNNIPFKKIYITGLINDKYGKKMSKSNNNVIDPINIINGKLLNNNKKNYYVIDSLRMTLLSLNNSKNINFNINNIYNYKNFCNKLWNSSLYIINNCKNIKKCNFYKIKIKLDINKWIIIELNEIIKNSIFFIKKYKFNIFINLIYNFFWHKFCDWYIEMTKFYFKKYKKKYINEIKNVLLFVIINIIKLLHPVIPFITEKIWILINNDIFLKKKNKSIIFQNINYKKITIDRDNILKKKIIYLQELIILTRKYIKKGKNIINYIVLNDKKYLYIIKKYKNIMIFLLKIDKIYINFKKKNIKNNYINIKI
SIO_010081: NAREPO1_RS00425
subclass of: SO_0000673
so part of: NAREPO1_RS00425
location: 79696..82161
location: region:79696-82161:1
so has part: feature:79696-82161:1:exon

WP_130624051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79696-82161:1:exon

NAREPO1_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00430
old locus tag: NAREPO1_00870
so part of: sequence
location: 82209..82283
location: region:82209-82283:1
so has part: feature:82209-82283:1:exon
subclass of: SO_0000663

position:82209:1
position: 82209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82283:1
position: 82283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82209-82283:1:exon

NAREPO1_RS00430
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00430
old locus tag: NAREPO1_00870
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:82244..82246,aa:Ile,seq:cat)
SIO_010081: NAREPO1_RS00430
subclass of: SO_0000673
so part of: NAREPO1_RS00430
location: 82209..82283
location: region:82209-82283:1
so has part: feature:82209-82283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82209-82283:1:exon

NAREPO1_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpoD
locus tag: NAREPO1_RS00435
old locus tag: NAREPO1_00880
so part of: sequence
location: complement(82290..83858)
location: region:82290-83858:-1
so has part: feature:82290-83858:-1:exon
subclass of: SO_0000010

position:82290:-1
position: 82290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83858:-1
position: 83858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82290-83858:-1:exon

NAREPO1_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpoD
locus tag: NAREPO1_RS00435
old locus tag: NAREPO1_00880
inference: COORDINATES: protein motif:HMM:NF004208.0
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MLNDTFFKNNNFKNNNYEEEVNFRKNNNKNELKLTYTNSNKFSSPTKTYMREMGIINLLTRDNEIKISKEIEYGLYDIQIAISEYHLLLFKFIKEYKNSYNESSKISELIVKFLDYKKNSNDIENECNIDLDFVKNKYKYLNNKYNEFIYCLNKYGRYSRITNKKLKKIQSIFLNFKISNVFLNYLVKYVYNIVKKINKYEKKIKNIFLFKFKFNRLRYKNKFYNNNYLKNIKNYIDKNNNFYYKKVFFVLKIKKIEYISKLNIFHIKSIYFRIKNGLNKSEKAKKIMIESNLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRKGYKFSTYATWWIRQSITRSIADQARTIRIPVHMIETINKLNRISRKFLQEEGKEPSLYELSKKMLISEEKIKRILKISKEPISMETPIGDDDDTYLSDFIEDTSNKLPLELATEEDLKNAIKNILKSLTEREAKVLKMRFGIDNNTDHTLEEVGKKFDVTRERIRQIEAKALRKLKHPSRSDILKNFLDE
SIO_010081: NAREPO1_RS00435
subclass of: SO_0000673
so part of: NAREPO1_RS00435
location: complement(82290..83858)
location: region:82290-83858:-1
so has part: feature:82290-83858:-1:exon

WP_130624052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82290-83858:-1:exon

NAREPO1_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaG
locus tag: NAREPO1_RS00440
old locus tag: NAREPO1_00890
so part of: sequence
location: complement(83899..85653)
location: region:83899-85653:-1
so has part: feature:83899-85653:-1:exon
subclass of: SO_0000010

position:83899:-1
position: 83899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85653:-1
position: 85653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83899-85653:-1:exon

NAREPO1_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaG
locus tag: NAREPO1_RS00440
old locus tag: NAREPO1_00890
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MKLLMKKNNYNNIDYDFINKIIEYTDIIDILSKYINLTKIGNNYFSICPFHKENNPSFIVNKSKKFYYCFGCKVYGNIINFLIFFKKKTFIEVVNELSSLNGIYINSNNIYKKKYNLYSESMKNINKLYIENLFNKFNFYKLSFFFIKKKWKLNVIKLFNIGYSSHLLINKFLKINKINLNILVNIGILKKKNNNYIDIFYNRLIFPIFDYINGNIIGFGGKNLYKKNLPKYINSSDSKIFKKKNCIYGLYQVKQIYNNNISKLLLVEGYTDVISLFNIGINYAVSSLGCNLTNDQIKILFNNTNELILCYDGDKSGFNSLYNLINKILLYLTDDRRISFIIMPKNEDPDSLLQKIKKEDFINIINSSIDIFDFIFKFYENNSNSFYNKINIINNLIKYIDLIPGKLMKFFFKKKICKKFNIDINELNSFLYKKNENYIYINKFINNPIRILIKFLLDKPELHKLIIIPSELKIINNYEMIIFLKIIFICYKYNINKNLLLFFKNYKYFNYLYKISKINILIKNDNNNKIFLHVLNKVYLLLYYNNYDNIIKKIKSIKLLNDIDKKYLIFLNKKILKLSKNFVL
SIO_010081: NAREPO1_RS00440
subclass of: SO_0000673
so part of: NAREPO1_RS00440
location: complement(83899..85653)
location: region:83899-85653:-1
so has part: feature:83899-85653:-1:exon

WP_130624053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83899-85653:-1:exon

NAREPO1_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsU
locus tag: NAREPO1_RS00445
old locus tag: NAREPO1_00900
pseudo: true
so part of: sequence
location: complement(<85679..85825)
location: region:85679-85825:-1
so has part: feature:85679-85825:-1:exon
subclass of: SO_0000010

position:85679:-1
position: 85679
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:85825:-1
position: 85825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85679-85825:-1:exon

NAREPO1_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsU
locus tag: NAREPO1_RS00445
old locus tag: NAREPO1_00900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874014.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
SIO_010081: NAREPO1_RS00445
subclass of: SO_0000673
so part of: NAREPO1_RS00445
location: complement(<85679..85825)
location: region:85679-85825:-1
so has part: feature:85679-85825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85679-85825:-1:exon

NAREPO1_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: tsaD
locus tag: NAREPO1_RS00450
old locus tag: NAREPO1_00910
so part of: sequence
location: 85936..86967
location: region:85936-86967:1
so has part: feature:85936-86967:1:exon
subclass of: SO_0000010

position:85936:1
position: 85936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86967:1
position: 86967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85936-86967:1:exon

NAREPO1_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: tsaD
locus tag: NAREPO1_RS00450
old locus tag: NAREPO1_00910
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03723.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MKILGIETSCDNIGISIFDSIKNTFVFNKIFNQLIHKKYGGVVPNLASIHHSNNIYEYFKKTIKKYNININNDIDCIACTAGPGLFGSLVIGSCFSKSLSYSIKKPFYEINHLEGHLLSSLIYKKYNINKIFPFISLIISGGNTKLIFSEKIGNYKIIGETLDDSIGEIIDKIAKKLKLNYPGGPEIYKLSKFGTENIYKFPIPIINNNNLNFSFSGLKTYIINIIDKYKKIDNRLKYNISLELQNTLSNILIKKSFNSLKKFNVKTLLISGGVSSNIFIRKKFKTFFKGKNIKIFFPKIRFCTDNGAMIAYACYMNILYNKYYFPNNKLNIFINTKWSIENV
SIO_010081: NAREPO1_RS00450
subclass of: SO_0000673
so part of: NAREPO1_RS00450
location: 85936..86967
location: region:85936-86967:1
so has part: feature:85936-86967:1:exon

WP_130624055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85936-86967:1:exon

NAREPO1_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00455
old locus tag: NAREPO1_00920
so part of: sequence
location: complement(86976..88184)
location: region:86976-88184:-1
so has part: feature:86976-88184:-1:exon
subclass of: SO_0000010

position:86976:-1
position: 86976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88184:-1
position: 88184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86976-88184:-1:exon

NAREPO1_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00455
old locus tag: NAREPO1_00920
inference: COORDINATES: protein motif:HMM:NF013871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIYLVGGAIRDSLLKLPIKEKDWVVVGSDINNMIKLGYKQVGKKFPVFIHPKSKEEYALARKEIKNNVGHKGFICFFSKKTTIIDDLYRRDLTINAIAKDSYNNIIDPFNGIKDIKNRIIKHVSNNFSDDPLRLLRVARFYSYLYHLNFNISLSTIKMLKKISYSGELKYISYDRIWKELKKTMLTNNPICFFRVLIISNSLNIIFPEIGYLLNNINNQFFFKKKFFKKNKNINHLEKNYIIRFLSLFYIIFKYYIRSNKNIKKKIFIFKNKINILSIKFNLPKKIKFILKKIDLIYKLDRELNNFNLFKIIDILHLLKINNNLELLNIIIKISFINLDKKIVFIDKKNKINYFKKDLIIKIFKLINCISIKDIILEGFINKNINNELIIRQKKKILLYFK
SIO_010081: NAREPO1_RS00455
subclass of: SO_0000673
so part of: NAREPO1_RS00455
location: complement(86976..88184)
location: region:86976-88184:-1
so has part: feature:86976-88184:-1:exon

WP_130624056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86976-88184:-1:exon

NAREPO1_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsT
locus tag: NAREPO1_RS00460
old locus tag: NAREPO1_00930
so part of: sequence
location: complement(88254..88496)
location: region:88254-88496:-1
so has part: feature:88254-88496:-1:exon
subclass of: SO_0000010

position:88254:-1
position: 88254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88496:-1
position: 88496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88254-88496:-1:exon

NAREPO1_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsT
locus tag: NAREPO1_RS00460
old locus tag: NAREPO1_00930
inference: COORDINATES: protein motif:HMM:TIGR00029.2
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MKNKKFVLKNIRNKKRNSYAKSTIKTLLKKINIYKKNNELNNDHIIKIQSYIDKKSNKNIINKNKASRIKSKIMKLKNNI
SIO_010081: NAREPO1_RS00460
subclass of: SO_0000673
so part of: NAREPO1_RS00460
location: complement(88254..88496)
location: region:88254-88496:-1
so has part: feature:88254-88496:-1:exon

WP_130624057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88254-88496:-1:exon

NAREPO1_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ileS
locus tag: NAREPO1_RS00465
old locus tag: NAREPO1_00940
so part of: sequence
location: 88610..91429
location: region:88610-91429:1
so has part: feature:88610-91429:1:exon
subclass of: SO_0000010

position:88610:1
position: 88610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91429:1
position: 91429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88610-91429:1:exon

NAREPO1_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ileS
locus tag: NAREPO1_RS00465
old locus tag: NAREPO1_00940
EC number: 6.1.1.5
inference: COORDINATES: protein motif:HMM:TIGR00392.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MKFINNLNIPKTSFSIKNKINNELELIKKIKYKNIYNFIIKKRKKNKIFFLHDGPPYANGNIHIGHAVNKILKDIIVKFKLLSGYNISFIPGWDCHGLPIELKIKNNNSNIELLNLKNTNSFFKECRNYTNNEIEKQKESFIKLGIIADWKNFYYTSNFNIESKIINILGELFNLGYLERKFKPVYWCIKCKSSISEMEVIYKNELSLSLYIKFELINVNTINIEKKYLKFKIYLISYTNTIWTLNDVTSISVNKNIFYNIIFYKNEVYILFNKILKNNNLKNINYININTIKGEKLINLRCINPLNKKNINIINNDSIDKNIESIINISPGHNLIDYELGIKNNLDILNSINENGFLFYNEYKKYIYIDEYKLIIKNFLFKNNKIFLYKNTYNKYPFCYRHNFKIFFRLTYQWFINLEHKNLREKAIELTKNVKWIPKWGKNKIQNMLYNRLEWCISRQRKWGIPITFFINKNNNEIHPKSYLFIKKISKKIKKYGIEYWNNLNIKDFLKKKDYNLFYKSKDILDVWFDSGSSLIFMSSLYKRMKKYKRADIYLEGQDQYRGWFMSSLLINAALLNKEPYKTVITHGFVLDNLNKKMSKSLGNVIDPNILINKYGSDVIRLWIASSNYNKDIKISIETLNRVSDIYKKIRNTLRFLISNLYDFNPNINCVKFNNMVKIDQWIINKLYFVQEKIMHNYNNYLFNNVITLISNFCIINLSSTYFEIIKDRQYIFNSDSKYRRSSQTAIFHILKSISIIISPILSFMSNEIYDNFIPNKKNKLVFIEKWYKLKRFNKNEKFNEDFWNIIFNIKHQINIILEEKIKKKYIQTFMEMDIILYIINKKKFFNKINILKNELKYIFIVSHVLLVKLKKINNNNNTINNNLKFSKINFIKIKTFHNFYKKKCNRCWNFYRKKYIKNKICKRCINIINYKEEKRFFA
SIO_010081: NAREPO1_RS00465
subclass of: SO_0000673
so part of: NAREPO1_RS00465
location: 88610..91429
location: region:88610-91429:1
so has part: feature:88610-91429:1:exon

WP_130624058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88610-91429:1:exon

NAREPO1_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rsmA
locus tag: NAREPO1_RS00470
old locus tag: NAREPO1_00950
so part of: sequence
location: complement(91445..92218)
location: region:91445-92218:-1
so has part: feature:91445-92218:-1:exon
subclass of: SO_0000010

position:91445:-1
position: 91445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92218:-1
position: 92218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91445-92218:-1:exon

NAREPO1_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rsmA
locus tag: NAREPO1_RS00470
old locus tag: NAREPO1_00950
EC number: 2.1.1.182
inference: COORDINATES: protein motif:HMM:NF012616.2
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MIIKKKLGQHFIINNNLIKYFIDLIDIKNNNIILEIGAGFGYITSFLVKKTNNLILLEIDKNLYNFLLKKFKKYKKIFILNRDARYVNIEKIKLMFINKNYKLKIIGSLPYCSSIPILLNLNKYYKIIDSAYFIIQKEVAEKLKCSNGFNSKLSVIINIFFNIEIINYKIYPNSFFPIPKVNSSIIKLTPKFNINISKINFLKFKFLLNLIFNKKRKMIKNSLKSFINFDKIKNICDPNFRHNKLSLNDFYNLHKYI
SIO_010081: NAREPO1_RS00470
subclass of: SO_0000673
so part of: NAREPO1_RS00470
location: complement(91445..92218)
location: region:91445-92218:-1
so has part: feature:91445-92218:-1:exon

WP_130624059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91445-92218:-1:exon

NAREPO1_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00475
old locus tag: NAREPO1_00960
so part of: sequence
location: complement(92229..93494)
location: region:92229-93494:-1
so has part: feature:92229-93494:-1:exon
subclass of: SO_0000010

position:92229:-1
position: 92229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93494:-1
position: 93494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92229-93494:-1:exon

NAREPO1_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00475
old locus tag: NAREPO1_00960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNIIYFFLLVFLFIKESFANDIIYNDKIIAVINNNLILSNDLESYCKIESLESLNNDNNLSFKNIILNKILINKIIKDIFKNNIIINNIDIKIDKYLNNISKNLCLNKKEFLHYINKNNLKIEEYKNFIKKKILINKIIKNKIYNINLINKNDILDFKKNRENNLIINDIFNTYNLDLIKIKNNNFDKNKFDIYKIIKNLEDNNNKKIKYNKKNNIIEVKNFNCYFNNLPYILKLNINKNYNNNKNIIGPIYISDFIYFIKINSIKKINNKNKIKLFTFDYFYNNEINDKVNSDNNLNYINGIKKKILNNYKNNNMYENYKNIICKKYFLYHFNKNKKFKIYLENIKKNKCTDFFEYKNKWGFIYLKEYEYYNYDEYLKDNFIKEYILKSKSMYLIKKMIDNYINNNYIKILDKCYKINI
SIO_010081: NAREPO1_RS00475
subclass of: SO_0000673
so part of: NAREPO1_RS00475
location: complement(92229..93494)
location: region:92229-93494:-1
so has part: feature:92229-93494:-1:exon

WP_130624060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92229-93494:-1:exon

NAREPO1_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00480
old locus tag: NAREPO1_00970
so part of: sequence
location: complement(93516..94898)
location: region:93516-94898:-1
so has part: feature:93516-94898:-1:exon
subclass of: SO_0000010

position:93516:-1
position: 93516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94898:-1
position: 94898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93516-94898:-1:exon

NAREPO1_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00480
old locus tag: NAREPO1_00970
inference: COORDINATES: protein motif:HMM:NF039907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
translation: MNLKNKSEIDIINNLFKKNKFYIELLKKILNYIFIIKKVNFSYINIKYNICLEYSIKNNVFFLNKKYNSYINIFLYIKNKFINIKTYNFNIENIKNEINKYISFTTLINNNHIYIPDYHLMCFYPKNLNLLNFDDIFYNKNKFNIIQNIKNNIIDYSKKYNSITKVDDVTFYELYENFIYGNTYNVINNFYSSYYNINCTISSKNKYNITQKYDYINERSKKIINKIDKFGFNIVKESFLELNYIKIKSSISKIIIKNNIVSNIFLDFSRSINGKNIYLNKSYLKNYFNKKIFPSWMNIIEDPHILEEIGSCPFDKEGIETKKKFIIKNGILKNFLLDSFSSKMLKLFNTGNANGIYNWIFIIKHKKVLFDDLIKEMYNGILVTNIIGEGLNIFTGDYSQGISGFIIKNGIIDTFVNEITISGNLLQIFKNILLMSNDYNNKSIIKSGSIMIDNIKISGL
SIO_010081: NAREPO1_RS00480
subclass of: SO_0000673
so part of: NAREPO1_RS00480
location: complement(93516..94898)
location: region:93516-94898:-1
so has part: feature:93516-94898:-1:exon

WP_130624061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93516-94898:-1:exon

NAREPO1_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00485
old locus tag: NAREPO1_00980
so part of: sequence
location: complement(94930..96603)
location: region:94930-96603:-1
so has part: feature:94930-96603:-1:exon
subclass of: SO_0000010

position:94930:-1
position: 94930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96603:-1
position: 96603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94930-96603:-1:exon

NAREPO1_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00485
old locus tag: NAREPO1_00980
inference: COORDINATES: protein motif:HMM:NF014895.2
GO function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative PEP-binding protein
translation: MILNNGIIVSKGLSKGSAFIIKKENFIEEKKISKKEIDIELNKFLLSYKLTINELENIEKRAKIVFNNDNNEIFKAEILILKNKNIINEIKDSICKKLYSSEYSIYYVIKKKINNIFNKDNIYKSDYIIDICNRLINNINKKTLLSINNNNIILISKNILPSYILEINKNILGIISENGNYISHSCIIARSLRIPMIVGIKNIYNIIKNNDYIILDAINNKLFINPNSLEIYKFNLKYKKKIKKENKNKFIKKNIFLNKNIKFYININSSYDIEKLYKYNIYDIGLCRSEFLFNNKNIYEENFQFNQYKKILNILKNNTLTIRIFDILRNNFLCNKNNIYKEEEIFFKNKKINYFNLKNILTIQIQAILRASYFGNIRILLPMISIYEEVIEIKKIIKKVKLYFIKNKILFDKNIKIGIMIETPSIIMILNKIIKYIDFFVIGLNDLTRHTLAFDRSNANFFSYKSIYPSIIIFIKKIIDIVGLKKELYLCGEILDNKNYIKLLISLGIKKFSINIVDINRFNKIINDIDIKKIKKNNYLILNQYKINNIIKILNKC
SIO_010081: NAREPO1_RS00485
subclass of: SO_0000673
so part of: NAREPO1_RS00485
location: complement(94930..96603)
location: region:94930-96603:-1
so has part: feature:94930-96603:-1:exon

WP_130624062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94930-96603:-1:exon

NAREPO1_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00490
old locus tag: NAREPO1_00990
so part of: sequence
location: complement(96626..96892)
location: region:96626-96892:-1
so has part: feature:96626-96892:-1:exon
subclass of: SO_0000010

position:96626:-1
position: 96626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96892:-1
position: 96892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96626-96892:-1:exon

NAREPO1_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00490
old locus tag: NAREPO1_00990
inference: COORDINATES: protein motif:HMM:NF012599.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr family phosphocarrier protein
translation: MYIKNIKINIKQGFHIRPLVKIVNFCKNFNLNLYILKYNYFANGKNLFELQKLKIINNDIITIVIYNKYKIETIYLLEKLLESINKEN
SIO_010081: NAREPO1_RS00490
subclass of: SO_0000673
so part of: NAREPO1_RS00490
location: complement(96626..96892)
location: region:96626-96892:-1
so has part: feature:96626-96892:-1:exon

WP_130624063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96626-96892:-1:exon

NAREPO1_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ligA
locus tag: NAREPO1_RS00495
old locus tag: NAREPO1_01000
so part of: sequence
location: 96995..98746
location: region:96995-98746:1
so has part: feature:96995-98746:1:exon
subclass of: SO_0000010

position:96995:1
position: 96995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98746:1
position: 98746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96995-98746:1:exon

NAREPO1_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ligA
locus tag: NAREPO1_RS00495
old locus tag: NAREPO1_01000
EC number: 6.5.1.2
inference: COORDINATES: protein motif:HMM:NF005932.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MNKIKLKIISLIKKINYFNYNYNILNKSIISDNEYDFLYNKLEILSKKYPNLIKNYYINNINNNLHLTSNSHKHILKMISIKSTYSIKKIYKFEENIIKKNNIKIKEYCCELKLDGIAINIIYKNNNLYKILTRGNGEYGEDITKNKFFIKNIPDKIVFLNYKSPSLVEIRGELCISNYNFDFINKIIKEKYNKIFVNKRHAVSGIIRNKIKNKIYYKLLNFIAHGIGYCFFLNKSLNKFKKHNNLLNYINKLGFETVERKICKTIKESIKYINFIEDNYKFNKYKYLIDGVILKINSIKLQNILGNSSKYPNWSIAYKFNSTYKETILTDVTFNITKNGNFIPIGKIKSINISGINIKKIFLHNIKKIKSLDLMIGDYILIYLSGNLIPTIKNVIKDKRNNEIKNIFYPKNCLSCNYKLSLYKDILKCNNFFCKSKIKYKISHFFSKKCIYIKYLNKKNICELIDDNFVKNIIDIFKLDLNILNKYIKNNKKVNSIYKTINGKVNINIKNFLYALNIENIGEKTLSIICNNIKKYEELFTLNNIYIKDLNKNQLKNINIFFSKIKNINFIKEITQKYINIIF
SIO_010081: NAREPO1_RS00495
subclass of: SO_0000673
so part of: NAREPO1_RS00495
location: 96995..98746
location: region:96995-98746:1
so has part: feature:96995-98746:1:exon

WP_130624064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96995-98746:1:exon

NAREPO1_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00500
old locus tag: NAREPO1_01010
so part of: sequence
location: complement(98753..98825)
location: region:98753-98825:-1
so has part: feature:98753-98825:-1:exon
subclass of: SO_0000663

position:98753:-1
position: 98753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98825:-1
position: 98825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98753-98825:-1:exon

NAREPO1_RS00500
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00500
old locus tag: NAREPO1_01010
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(98790..98792),aa:Lys,seq:ttt)
SIO_010081: NAREPO1_RS00500
subclass of: SO_0000673
so part of: NAREPO1_RS00500
location: complement(98753..98825)
location: region:98753-98825:-1
so has part: feature:98753-98825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98753-98825:-1:exon

NAREPO1_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00505
old locus tag: NAREPO1_01020
so part of: sequence
location: complement(98837..98908)
location: region:98837-98908:-1
so has part: feature:98837-98908:-1:exon
subclass of: SO_0000663

position:98837:-1
position: 98837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98908:-1
position: 98908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98837-98908:-1:exon

NAREPO1_RS00505
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00505
old locus tag: NAREPO1_01020
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(98874..98876),aa:Val,seq:tac)
SIO_010081: NAREPO1_RS00505
subclass of: SO_0000673
so part of: NAREPO1_RS00505
location: complement(98837..98908)
location: region:98837-98908:-1
so has part: feature:98837-98908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98837-98908:-1:exon

NAREPO1_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: gltX
locus tag: NAREPO1_RS00510
old locus tag: NAREPO1_01030
so part of: sequence
location: 98984..100375
location: region:98984-100375:1
so has part: feature:98984-100375:1:exon
subclass of: SO_0000010

position:98984:1
position: 98984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100375:1
position: 100375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98984-100375:1:exon

NAREPO1_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: gltX
locus tag: NAREPO1_RS00510
old locus tag: NAREPO1_01030
EC number: 6.1.1.17
inference: COORDINATES: protein motif:HMM:TIGR00464.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MIITRFAPSPNGYLHIGNIRIALYSWIFAKKNNGKFLLRIEDTDINDSNKIFKKNIIKDMKWLGLNWDNKVIIQSDRINIYNKIIDELLESKLAYPCFCKINNKIFKKNKKYKKYNKFCRYKNFSSYDLKNKLHVIRFKNPINTEIILNDKIYGLIKFNSNELDDLIIRRENKLPTYNFCVVVDDIYSKITHIIRGSDHISNTPKQINIFNAMNYKVPEYIHIPIILDKNKNKISKIKNNLNLKYFKYNGILSKSIIHYLSSIGNSCFENINKNVFSKKEIINNFNIYKINKSQITFDYKKVLQINKNYLCYTDINKIYKFFRKFINLKKIKIKNDFRILKLFRNSYFTFNEIIENNDFLYIEPKLNINLLKNNLTINNFNIINTINNIKNNIFFINKWNLDNINISLCKEINKYSIEYKHYIYKIIRILISGKLKTTSISIIIYILGKNISINRLDKINIIK
SIO_010081: NAREPO1_RS00510
subclass of: SO_0000673
so part of: NAREPO1_RS00510
location: 98984..100375
location: region:98984-100375:1
so has part: feature:98984-100375:1:exon

WP_130624065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98984-100375:1:exon

NAREPO1_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00515
old locus tag: NAREPO1_01040
so part of: sequence
location: complement(100393..100466)
location: region:100393-100466:-1
so has part: feature:100393-100466:-1:exon
subclass of: SO_0000663

position:100393:-1
position: 100393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100466:-1
position: 100466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100393-100466:-1:exon

NAREPO1_RS00515
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00515
old locus tag: NAREPO1_01040
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(100430..100432),aa:Pro,seq:tgg)
SIO_010081: NAREPO1_RS00515
subclass of: SO_0000673
so part of: NAREPO1_RS00515
location: complement(100393..100466)
location: region:100393-100466:-1
so has part: feature:100393-100466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100393-100466:-1:exon

NAREPO1_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00520
old locus tag: NAREPO1_01050
so part of: sequence
location: complement(100482..100555)
location: region:100482-100555:-1
so has part: feature:100482-100555:-1:exon
subclass of: SO_0000663

position:100482:-1
position: 100482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100555:-1
position: 100555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100482-100555:-1:exon

NAREPO1_RS00520
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00520
old locus tag: NAREPO1_01050
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(100519..100521),aa:His,seq:gtg)
SIO_010081: NAREPO1_RS00520
subclass of: SO_0000673
so part of: NAREPO1_RS00520
location: complement(100482..100555)
location: region:100482-100555:-1
so has part: feature:100482-100555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100482-100555:-1:exon

NAREPO1_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00525
old locus tag: NAREPO1_01060
so part of: sequence
location: complement(100574..100645)
location: region:100574-100645:-1
so has part: feature:100574-100645:-1:exon
subclass of: SO_0000663

position:100574:-1
position: 100574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100645:-1
position: 100645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100574-100645:-1:exon

NAREPO1_RS00525
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00525
old locus tag: NAREPO1_01060
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(100611..100613),aa:Asn,seq:gtt)
SIO_010081: NAREPO1_RS00525
subclass of: SO_0000673
so part of: NAREPO1_RS00525
location: complement(100574..100645)
location: region:100574-100645:-1
so has part: feature:100574-100645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100574-100645:-1:exon

NAREPO1_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01230
old locus tag: NAREPO1_01070
so part of: sequence
location: complement(100675..100956)
location: region:100675-100956:-1
so has part: feature:100675-100956:-1:exon
subclass of: SO_0000010

position:100675:-1
position: 100675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100956:-1
position: 100956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100675-100956:-1:exon

NAREPO1_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01230
old locus tag: NAREPO1_01070
inference: COORDINATES: protein motif:HMM:NF013718.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MNKIFNFINKKILFKNNNYSFPSGHTLLFYNILFNFIYYKNLLNINIIVIFILNFIIIFLLIFRVIFKIHYLTDILFSIIINFIINIIIFYIF
SIO_010081: NAREPO1_RS01230
subclass of: SO_0000673
so part of: NAREPO1_RS01230
location: complement(100675..100956)
location: region:100675-100956:-1
so has part: feature:100675-100956:-1:exon

WP_232616962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100675-100956:-1:exon

NAREPO1_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: lon
locus tag: NAREPO1_RS00535
old locus tag: NAREPO1_01080
so part of: sequence
location: complement(101331..103670)
location: region:101331-103670:-1
so has part: feature:101331-103670:-1:exon
subclass of: SO_0000010

position:101331:-1
position: 101331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103670:-1
position: 103670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101331-103670:-1:exon

NAREPO1_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: lon
locus tag: NAREPO1_RS00535
old locus tag: NAREPO1_01080
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500154.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MDEKNKNKYTLPILPLRDIVIYPNMLVPLFVGREKSIKSLNKAINNDKKIILVTQKSSIEDYPADKNNLYSTGTMSNILQILKLPDGTIKILIEGISRVYIDDLINNGEHIEANVTEVNSYESNSKEYKVMIRTLINQFETYIKLNKKISPEIIGSINNIEDKSKIIDTIASNIPIKVKDKQYILEEINLNKRLEFLIKNIEYEIELLHIEKKIRNRIKKQMEKGQREYYLNEQIKAIQKELGEINNTPDEYEIIKNKINLLKSSKEIKNKLENELNKLKTMSSISAESTVIRSYIDCILSIPWKTKSKIKKDLKYAKNILDNNHYGLYEVKERILEYLAVQNRNNKISGPIICLIGPPGVGKTSLGHSIAKSTGRKFERISLGGLRDEAEIRGHRRTYIGSMPGKIIQKMSKCGVINPLILLDEIDKMSSDIRGDPSSALLEVLDTEQNKKFNDHYLEIDYDLSNVMFIATANSMNISKTLLDRMEIIKISGYSEAEKINIVNKYIIQKQLKSNALKANEINISNSAIISIIRNYTKESGLRNLEREISKIFRKCVKRILISNSNKLIKITKNNLKKFLGISKFDYKKVKDSDNFIGKATGLAWTELGGEILYIESSFVPGKGKLIYTGSLGKVMQESIKIALTVMRYILNKINKKFNYYNYDIHVHSPEGAIPKDGPSAGITICTSLISAFTNISIKSDIAMTGEITLQGDVLPIGGLKEKLLAAKRGGIKKVIIPYKNLKNLYSFDKNIISNLDILPVKNIKDVISNSFTKDIFKT
SIO_010081: NAREPO1_RS00535
subclass of: SO_0000673
so part of: NAREPO1_RS00535
location: complement(101331..103670)
location: region:101331-103670:-1
so has part: feature:101331-103670:-1:exon

WP_130624066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101331-103670:-1:exon

NAREPO1_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00540
old locus tag: NAREPO1_01090
so part of: sequence
location: complement(103730..103803)
location: region:103730-103803:-1
so has part: feature:103730-103803:-1:exon
subclass of: SO_0000663

position:103730:-1
position: 103730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103803:-1
position: 103803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103730-103803:-1:exon

NAREPO1_RS00540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00540
old locus tag: NAREPO1_01090
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(103767..103769),aa:Asp,seq:gtc)
SIO_010081: NAREPO1_RS00540
subclass of: SO_0000673
so part of: NAREPO1_RS00540
location: complement(103730..103803)
location: region:103730-103803:-1
so has part: feature:103730-103803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103730-103803:-1:exon

NAREPO1_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaQ
locus tag: NAREPO1_RS00545
old locus tag: NAREPO1_01100
so part of: sequence
location: complement(103837..104532)
location: region:103837-104532:-1
so has part: feature:103837-104532:-1:exon
subclass of: SO_0000010

position:103837:-1
position: 103837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104532:-1
position: 104532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103837-104532:-1:exon

NAREPO1_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaQ
locus tag: NAREPO1_RS00545
old locus tag: NAREPO1_01100
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499954.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit epsilon
translation: MNEKRIVLDTETTGINKNGIYYINHKIIEIGAVVIINRKITNKKFHYYLNPNKKISYDAYKVHKISNDFLINKPLFKDICNEFIKFIYGSILIIHNAKFDIDFINYELKLINHKIKNILNICKVIDSLDIARKKFPGKKNSLEALCERFKIDKKNLHSAINDSNILAKIFLLLTRGQKKISFKLNNNNNNKILKNNINNEIIKYKITYANNKEIKCHKNFLQYIEKKYRLK
SIO_010081: NAREPO1_RS00545
subclass of: SO_0000673
so part of: NAREPO1_RS00545
location: complement(103837..104532)
location: region:103837-104532:-1
so has part: feature:103837-104532:-1:exon

WP_130624067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103837-104532:-1:exon

NAREPO1_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00550
old locus tag: NAREPO1_01110
so part of: sequence
location: 104582..105061
location: region:104582-105061:1
so has part: feature:104582-105061:1:exon
subclass of: SO_0000010

position:104582:1
position: 104582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105061:1
position: 105061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104582-105061:1:exon

NAREPO1_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00550
old locus tag: NAREPO1_01110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase H family protein
translation: MKIFDIFIDGSCLINPGPGGYGIIIKNYNNCKNIFISKGYYFTTNNRMELMSAIFSLKNIYIKNNNINIYTDSLYLKNGITKWIFIWINNNWKSCKKKKIKNIDLWIKLYNLSKLYIIKWNWIKKNSYYNNILCDNLAKKAAKNPTEIDKWYIKNNNKL
SIO_010081: NAREPO1_RS00550
subclass of: SO_0000673
so part of: NAREPO1_RS00550
location: 104582..105061
location: region:104582-105061:1
so has part: feature:104582-105061:1:exon

WP_130624068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104582-105061:1:exon

NAREPO1_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: argS
locus tag: NAREPO1_RS00555
old locus tag: NAREPO1_01120
so part of: sequence
location: 105071..106831
location: region:105071-106831:1
so has part: feature:105071-106831:1:exon
subclass of: SO_0000010

position:105071:1
position: 105071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106831:1
position: 106831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105071-106831:1:exon

NAREPO1_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: argS
locus tag: NAREPO1_RS00555
old locus tag: NAREPO1_01120
EC number: 6.1.1.19
inference: COORDINATES: protein motif:HMM:TIGR00456.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MLNIKKFLFDFIKNFLAKKKIIYNINLIKIKFIKYRKFGDYQIYGIKNLEDKINKKNNYLFIINNLKLELKKINFIKEINIINFNFINIFLKKEWMEKELKKILISKRLNISKKKNQNNIVIDYSSPNMSKEMHAGHLRSSILGDSFFRISKFLGYNVIKINHIGDWGINFGMIINEIKIRNIENKISNLSISDLELIYINSKNKFNTDKNFKIKSNYYFKQLIDNNKKYVKIWKSIINLSTKNNDKIYKLLDLKLNNNDILGESFYKKFIPFIIKDLKNKKIAIKKNKSIIAPLRNYKNKFGKMMSVVLRKKKIYLYSITEIASIRYRCKYLFADRIIYFIDKRQKDHLLYSLHISKKANYINENVRFDHYSFGMILDNNKQPFKTRNKNNLKLIKLINKYIEKTKEFIINKNKLLLDNKKEMENISKIIAIGSLKYFDLSKNRLTDYIIDWNKIFLLNNNKLIYIYYSYMRINSIFNKINIKNLSKIKFIKKSNINISNNNELNISILIVRFEEILETVINYGTFNILCNYIYELSIEFTNYYHNNNFLLLEKNKYNSLNLILLISKIIKIGLYFLGIKIPKKI
SIO_010081: NAREPO1_RS00555
subclass of: SO_0000673
so part of: NAREPO1_RS00555
location: 105071..106831
location: region:105071-106831:1
so has part: feature:105071-106831:1:exon

WP_130624069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105071-106831:1:exon

NAREPO1_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murJ
locus tag: NAREPO1_RS00560
old locus tag: NAREPO1_01130
so part of: sequence
location: complement(106828..108372)
location: region:106828-108372:-1
so has part: feature:106828-108372:-1:exon
subclass of: SO_0000010

position:106828:-1
position: 106828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108372:-1
position: 108372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106828-108372:-1:exon

NAREPO1_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murJ
locus tag: NAREPO1_RS00560
old locus tag: NAREPO1_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706947.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MNLLKPLIYVSLATFISKILGFIRDIIIARTFGATVMTDAFFISFKLINLLRRIFAEGVFFQVFIPILINYKKNFDLDSTKKFISYVLGMLIVSLSIIIFLGIVFSPNILKITAPGFVNTDFKFSLSTKILRITFPFILIISLSSIFSAILNTWNMFFIPAFSAIFLNGSMIFFTIFSNKISNPPVLSLAWSVIVGGILQIIYQLIYLKNINMLILPKFTLNDNGIWIMFNKMWPVLISMSIHQMSIIFNTIFTSFLSSGSVSWMYYADRIMEFPSGILGIALNTILFPSLSRSVTNKDEEEYSKSLDWGLRLCFILSIPISFALIILSKPIVFSMFQYGKFSYFDAIMTQKALIAYSIGLIGIILVKILTPSFYSHQDTKTPLKVSLISFFATQILNFILIAKLEHIGLSLSMGITACFNSALLYWYLIKKGLFIPKNGWKQFFKKIIISVFIMSLSLIIILEYMPDWEIGGILSRLSRLIFIILFGFLIYILSLLSLGFRLKDFSYTSKYKN
SIO_010081: NAREPO1_RS00560
subclass of: SO_0000673
so part of: NAREPO1_RS00560
location: complement(106828..108372)
location: region:106828-108372:-1
so has part: feature:106828-108372:-1:exon

WP_130624070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106828-108372:-1:exon

NAREPO1_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: mnmA
locus tag: NAREPO1_RS00565
old locus tag: NAREPO1_01140
so part of: sequence
location: 108724..109794
location: region:108724-109794:1
so has part: feature:108724-109794:1:exon
subclass of: SO_0000010

position:108724:1
position: 108724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109794:1
position: 109794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108724-109794:1:exon

NAREPO1_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: mnmA
locus tag: NAREPO1_RS00565
old locus tag: NAREPO1_01140
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010896031.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MCKKVLIAMSGGVDSSVSAYLLKQKYIVEAIFINNWNFNICNNSKDLLDVINITNNILKIKLHILDFSKEFWEKVFIKTIKEYKKGKTPNPDILCNKYVKFNKLIKFMKSIKFDYISTGHYVKLKFINNKYFLKKSKDLYQDQSYFLYSLNQKILKYCIFPLGDMTKYNVRKLAKKNKLFNYNKPSSTGICFINNKNFKKFISKYIEKKYGKILTLDNKYIGNHDGHYYYTIGQRKGLNLGGIKNYNSKPWYIIKKDCKKNILYVSQNKNLNFLYKGLIVKNIDWIFFKSNFLSIKITAKIRYSINCISCKLYIINKNYLIIIFDNLNGIVVPGQSVVFYINNYCIGGGIIHKEIL
SIO_010081: NAREPO1_RS00565
subclass of: SO_0000673
so part of: NAREPO1_RS00565
location: 108724..109794
location: region:108724-109794:1
so has part: feature:108724-109794:1:exon

WP_232616963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108724-109794:1:exon

NAREPO1_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00570
old locus tag: NAREPO1_01150
so part of: sequence
location: complement(109789..110142)
location: region:109789-110142:-1
so has part: feature:109789-110142:-1:exon
subclass of: SO_0000010

position:109789:-1
position: 109789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110142:-1
position: 110142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109789-110142:-1:exon

NAREPO1_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00570
old locus tag: NAREPO1_01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT domain-containing protein
translation: MIKNNNNDIFYKIINRLIYSEIVFQDKLITIFKDKYPLAPIHLLIVTNKKIKTINDINYKDRIIIGHCFYIASRISKLYKISETGYRLISNCNKDACQKIFHFHIHLLGGKYLGDIL
SIO_010081: NAREPO1_RS00570
subclass of: SO_0000673
so part of: NAREPO1_RS00570
location: complement(109789..110142)
location: region:109789-110142:-1
so has part: feature:109789-110142:-1:exon

WP_130624072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109789-110142:-1:exon

NAREPO1_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00575
old locus tag: NAREPO1_01160
so part of: sequence
location: complement(110135..111091)
location: region:110135-111091:-1
so has part: feature:110135-111091:-1:exon
subclass of: SO_0000010

position:110135:-1
position: 110135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111091:-1
position: 111091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110135-111091:-1:exon

NAREPO1_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00575
old locus tag: NAREPO1_01160
inference: COORDINATES: protein motif:HMM:NF020680.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta' C-terminal domain-containing protein
translation: MNINFNFYKNTYNNIIYVISKYNINSIILVLNSNYDGLILFKKIVKWFICINKNNNTYCNLCNNCLKKNTDNVNNNYIILNLDYKNESEIYNLYKYIYQYKKILIYINTSNINFKYLIIISKYLNKKNILFIFKILKLENFNLYILNKSYKIYISNLDKKKIFNFLKKKFFINKIEMKIINNLEKKSIFNIFNIIKKFKNKRNELFYNINFFLKEKKIDNLFNFFLQNKEDFILKLFILIIIDVIYFKLNIKLKFNKDKFRLIYKLSKKMNIDSLFIILNNFIIYDKYYLDINSYIKNNILLYNILLLDKYIFKTKND
SIO_010081: NAREPO1_RS00575
subclass of: SO_0000673
so part of: NAREPO1_RS00575
location: complement(110135..111091)
location: region:110135-111091:-1
so has part: feature:110135-111091:-1:exon

WP_130624073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110135-111091:-1:exon

NAREPO1_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00580
old locus tag: NAREPO1_01170
so part of: sequence
location: complement(111111..111350)
location: region:111111-111350:-1
so has part: feature:111111-111350:-1:exon
subclass of: SO_0000010

position:111111:-1
position: 111111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111350:-1
position: 111350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111111-111350:-1:exon

NAREPO1_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00580
old locus tag: NAREPO1_01170
inference: COORDINATES: protein motif:HMM:NF012759.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopantetheine-binding protein
translation: MNKIEQKIKNIISNKFNITHDKLILIKSFKKELNIDSLDIIEIIMDIEDEFNIVIPDEYVDKLDNFYEIKNYLNKILNK
SIO_010081: NAREPO1_RS00580
subclass of: SO_0000673
so part of: NAREPO1_RS00580
location: complement(111111..111350)
location: region:111111-111350:-1
so has part: feature:111111-111350:-1:exon

WP_130624074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111111-111350:-1:exon

NAREPO1_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmF
locus tag: NAREPO1_RS00585
old locus tag: NAREPO1_01180
so part of: sequence
location: complement(111376..111552)
location: region:111376-111552:-1
so has part: feature:111376-111552:-1:exon
subclass of: SO_0000010

position:111376:-1
position: 111376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111552:-1
position: 111552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111376-111552:-1:exon

NAREPO1_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmF
locus tag: NAREPO1_RS00585
old locus tag: NAREPO1_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069893.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVQKRKKTKSKIGMRRSNKKYIFKNILKNIYTGEYHIYHRITKNGFYKNKLLNLKKK
SIO_010081: NAREPO1_RS00585
subclass of: SO_0000673
so part of: NAREPO1_RS00585
location: complement(111376..111552)
location: region:111376-111552:-1
so has part: feature:111376-111552:-1:exon

WP_130624075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111376-111552:-1:exon

NAREPO1_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00590
old locus tag: NAREPO1_01190
so part of: sequence
location: complement(111555..112478)
location: region:111555-112478:-1
so has part: feature:111555-112478:-1:exon
subclass of: SO_0000010

position:111555:-1
position: 111555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112478:-1
position: 112478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111555-112478:-1:exon

NAREPO1_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00590
old locus tag: NAREPO1_01190
EC number: 5.4.99.-
inference: COORDINATES: protein motif:HMM:TIGR00005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MKFFNIKYIDLNRRIDNWFFSNYKNVPKSLIYKIIRKGYVKINNSIVKPDYKLQINDKLDIIYNLFNKKKYSYIKYNDKEFIKNKILYEDKYLLIINKPHGISVHNGLSNTFNIISYIKSVYNNNYNLVHRLDKNSSGILIISKNLSILKKINFLFNENSIFKKYIALVYGAWNIKNNIIRLPIHTFIDKISKKKKSIISNHLGKKSITKINVIKYFKDMTLIEAIPITGRTHQIRIHTSFIGNPIVMDNIYGNKNYNKIVLKYGLKRMFLHSTYIKFIHPIYNKVIEINSPLDNKLSDFIKKISQL
SIO_010081: NAREPO1_RS00590
subclass of: SO_0000673
so part of: NAREPO1_RS00590
location: complement(111555..112478)
location: region:111555-112478:-1
so has part: feature:111555-112478:-1:exon

WP_130624076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111555-112478:-1:exon

NAREPO1_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00595
old locus tag: NAREPO1_01200
so part of: sequence
location: 112659..114455
location: region:112659-114455:1
so has part: feature:112659-114455:1:exon
subclass of: SO_0000010

position:112659:1
position: 112659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114455:1
position: 114455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112659-114455:1:exon

NAREPO1_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00595
old locus tag: NAREPO1_01200
inference: COORDINATES: protein motif:HMM:TIGR00757.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rne/Rng family ribonuclease
translation: MKKMLIDTSNEEEIRVALINDNWLYDLYIENYNNKQKKNNIYKGKIEHIENSLESVFVNYGYEKHGFLSLKNISDDYFIKKDTKTINRNINNLYKGQDLLVQVIKEERFNKGAVLTTFISLVGSYIILFPNNSKSFGISKRIDNKNKKILKEILSQLKFPNNMGLIIRTSCVGKIIEDIQYDLNLKIKNWEKIKNIYNSIDSPATICEENNILIKIFRDYLTQDISEIIIDNKSFIKKSKICLKDLGKNDFINKIKFYFGNYRIFSYHNIESQIETAFKRNIRLPSGGVITIDTTEALTAIDINSSKSTKCLDIEETAFKTNLEASNEIARQLRLRDLGGLIIIDFIDMLCKKNCLEIENNFKKFTYQDRAKIKFGNISKFGLLEISRQRLTNSLNESNYYICPRCKGNGFIRNNRSLLYLILRLIEEESLKENTKEIHVIVPILIGTILLNEKRKNINEIEEKRSNLIKIIIIPYDKIKTPNYIITRIKNGEEKNIFSYLIPYIYKKNIKHFKYKNTNNLINNNFLNENMTKINNINKIKNIYYLIKNYIFNFINKIKNIILKKFLYKRNNYIYRNKKSFKKRNFYFFKKNKKINKK
SIO_010081: NAREPO1_RS00595
subclass of: SO_0000673
so part of: NAREPO1_RS00595
location: 112659..114455
location: region:112659-114455:1
so has part: feature:112659-114455:1:exon

WP_130624077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112659-114455:1:exon

NAREPO1_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00600
old locus tag: NAREPO1_01210
so part of: sequence
location: complement(114453..114539)
location: region:114453-114539:-1
so has part: feature:114453-114539:-1:exon
subclass of: SO_0000663

position:114453:-1
position: 114453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114539:-1
position: 114539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114453-114539:-1:exon

NAREPO1_RS00600
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00600
old locus tag: NAREPO1_01210
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(114503..114505),aa:Ser,seq:tga)
SIO_010081: NAREPO1_RS00600
subclass of: SO_0000673
so part of: NAREPO1_RS00600
location: complement(114453..114539)
location: region:114453-114539:-1
so has part: feature:114453-114539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114453-114539:-1:exon

NAREPO1_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: asnS
locus tag: NAREPO1_RS00605
old locus tag: NAREPO1_01220
so part of: sequence
location: 114624..115952
location: region:114624-115952:1
so has part: feature:114624-115952:1:exon
subclass of: SO_0000010

position:114624:1
position: 114624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115952:1
position: 115952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114624-115952:1:exon

NAREPO1_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: asnS
locus tag: NAREPO1_RS00605
old locus tag: NAREPO1_01220
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126690.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MKHILLIKNILNNYNRFLDKYINIYGWVKNKRDFKKKSIFIDVNDGSSLNCIQIIINNELIKKELSIGSSIKIFGKLIKSKGHKQKIELIAKKINILGIVYNLNKYPLSSKKHSFEYLREITHLRSRTYIFNSISRIRNNIFYYIHKFMNKYNFLWIPTPIITKFDTEGSSDMFIIDRTLKNNKNFFGKKAFLTVSGQLNLESYACSMSKVYSFGPVFRAEKSNTKKHLAEFWMLELEISFFNLYKIINFSEFFIKKIFKEILNKNYKDIEYINNKINKNSIKKIEQYINNKFIILEYSNIINLLNKNKFNIKWGENITSYHEKFLLEKFKLPIYLIKYPYIMKPFYVKRCNKKLSLSMDLIFPEIGEIIGGSERENRLHILQKSMKLNNIKNKYYEDIRKYGSVIHSGFGMGLERLILLITGIENIRDVSAFPRFPDNINF
SIO_010081: NAREPO1_RS00605
subclass of: SO_0000673
so part of: NAREPO1_RS00605
location: 114624..115952
location: region:114624-115952:1
so has part: feature:114624-115952:1:exon

WP_130624078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114624-115952:1:exon

NAREPO1_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00610
old locus tag: NAREPO1_01230
so part of: sequence
location: complement(115960..116619)
location: region:115960-116619:-1
so has part: feature:115960-116619:-1:exon
subclass of: SO_0000010

position:115960:-1
position: 115960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116619:-1
position: 116619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115960-116619:-1:exon

NAREPO1_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00610
old locus tag: NAREPO1_01230
inference: COORDINATES: protein motif:HMM:NF017806.2
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-5-phosphate isomerase A
translation: MLNINELLLETLKHIKSDIILGIAYDNFTIELIKLIEKKNNIGNKLNCVSSSLNIINKFKDYKINFNKLEDVDYIDLYISSVDEIDNNMNILNGKNGSFTNEKIMLNLSKKFICITDDSKKVQFIGYKSPISIEIINSSIKFIYKKINDINGKCILRNNFISDNGNLIIDIYNLNIENPKFLEIYLNSIPGVIENSIFSNKNPDIIINSSEFGIENKIF
SIO_010081: NAREPO1_RS00610
subclass of: SO_0000673
so part of: NAREPO1_RS00610
location: complement(115960..116619)
location: region:115960-116619:-1
so has part: feature:115960-116619:-1:exon

WP_130624079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115960-116619:-1:exon

NAREPO1_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: pgk
locus tag: NAREPO1_RS00615
old locus tag: NAREPO1_01240
so part of: sequence
location: complement(116731..117885)
location: region:116731-117885:-1
so has part: feature:116731-117885:-1:exon
subclass of: SO_0000010

position:116731:-1
position: 116731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117885:-1
position: 117885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116731-117885:-1:exon

NAREPO1_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: pgk
locus tag: NAREPO1_RS00615
old locus tag: NAREPO1_01240
inference: COORDINATES: protein motif:HMM:NF012389.2
GO function: GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MLSIKDIKINNKILLIRSDFNVPIKNNKILSDIKILDSLETIKYALSNKAYIIIFSNLGDNYNKYFPLFSLEIIKKYLEKKLKVKINLIKNYLYKKNINVKKNEIYLLENVMFNNGEIKNNENLSKKYASLCDIFVMDSFSYSFMFHSSTYGVAKFAKISCCGLSFYKKANNLYTIFNQNRKIVSIIGGCNINKKILFIKKISIISYKIFIGGVIANDLLLFNNYKIGKSIIDYDINDNNNKNNSLEDLNNIILPNDVKTSINISKNSICKNKLINNINSNDIIVDLGSKYIKNIIDNIENIDILLWIGSIGIFEISNFSNGTKLILDNISKNKNLKSIIVGYSNFISLKKFNYIKKIYFYYIDSYTLFKFIENFNIPIIKYFT
SIO_010081: NAREPO1_RS00615
subclass of: SO_0000673
so part of: NAREPO1_RS00615
location: complement(116731..117885)
location: region:116731-117885:-1
so has part: feature:116731-117885:-1:exon

WP_130624080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116731-117885:-1:exon

NAREPO1_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: trmB
locus tag: NAREPO1_RS00620
old locus tag: NAREPO1_01250
pseudo: true
so part of: sequence
location: complement(117901..>118452)
location: region:117901-118452:-1
so has part: feature:117901-118452:-1:exon
subclass of: SO_0000010

position:117901:-1
position: 117901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118452:-1
position: 118452
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117901-118452:-1:exon

NAREPO1_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: trmB
locus tag: NAREPO1_RS00620
old locus tag: NAREPO1_01250
inference: COORDINATES: protein motif:HMM:TIGR00091.1
GO function: GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA (guanosine(46)-N7)-methyltransferase TrmB
SIO_010081: NAREPO1_RS00620
subclass of: SO_0000673
so part of: NAREPO1_RS00620
location: complement(117901..>118452)
location: region:117901-118452:-1
so has part: feature:117901-118452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117901-118452:-1:exon

NAREPO1_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00625
old locus tag: NAREPO1_01260
so part of: sequence
location: 118719..119783
location: region:118719-119783:1
so has part: feature:118719-119783:1:exon
subclass of: SO_0000010

position:118719:1
position: 118719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119783:1
position: 119783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118719-119783:1:exon

NAREPO1_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00625
old locus tag: NAREPO1_01260
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MYKTFIIVINLMYITMKISNSINNYKLYYTSLISINKFKKYNYYIWKEFSIDDDSFVTYKNNFLIRNYIDLNNKNITINCICKNKKIALKIITNEIKNIFSLKNILYYFYNKKINIDRYIYIKSFLLDYSDYLENIKNNLEKFTEILLSKKIYYIRSNGKNMYTLKINLIKNIDNKNDLINIIKLISNKYNIDYLLILSIIKAESNFNKFAISKYGAIGLMQIIENKSCADVLKVFNKKKKISVECLFNEKNNIDMGVAYIYILKNIYLSKIKNLISLRYLIISSYNGGTNSILKIFSNDFNESINIINNMSNDDVYNFIINHHPSEETKKYLKKVNRLYINYKNLEFNKKLCI
SIO_010081: NAREPO1_RS00625
subclass of: SO_0000673
so part of: NAREPO1_RS00625
location: 118719..119783
location: region:118719-119783:1
so has part: feature:118719-119783:1:exon

WP_130624082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118719-119783:1:exon

NAREPO1_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: mnmG
locus tag: NAREPO1_RS00630
old locus tag: NAREPO1_01270
so part of: sequence
location: 119774..121669
location: region:119774-121669:1
so has part: feature:119774-121669:1:exon
subclass of: SO_0000010

position:119774:1
position: 119774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121669:1
position: 121669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119774-121669:1:exon

NAREPO1_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: mnmG
locus tag: NAREPO1_RS00630
old locus tag: NAREPO1_01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353802.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MYLKKNINKNFFDVIVIGGGHSGVEASNASSKMGCKTLLITNNIDSIGQMSCNPSIGGIGKSHLVKEIDALGGIMSMAIDRSGIQFRKLNTSKGLAVQSTRAQADRYIYSREVKKILFSNKNLYVFQDKVIKLLINNNKINGISTVLGFNFFSKSVILCLGTFLNGFIYIGTKFKYKGGRSNDISSTYLSNQLKEIFPFSINKLKTGTPPRLDLKTINFNKLNFQKSDYPIPMFSFIKQNNNLKKIYCYITYTNENTHNIIYKNLHYSPMYTNKICSIGPRYCPSIEDKIIKFKDKKSHHIFLEPESLFSNEIYPNGISTSLPINIQFKIIKSIKGLEKCRITRPGYAVEYNFLDPKNLYYTLESKIISGLFISGQLNGTTGYEEAASQGIISGINAALFSKNMESWYPKKEYSYIGLMIKDLCDNGVIEPYRMFTSRSENRFFLREDNADMRLTKYGYNLGLINEFRWKIFVNKKNNILNEKNRLKNLNIDIKKINNKINKKINIEKKEINAFELLKLNEISYKDILNIIDYTYNKNKNYIEEIYKLIEIDIKYEYFILKQKKEVDIKNKFLKMLIPKDINYNNISGLSNESKYLLYKYRPNNIEDILKIPNITSSSIFILIIWIKNNRK
SIO_010081: NAREPO1_RS00630
subclass of: SO_0000673
so part of: NAREPO1_RS00630
location: 119774..121669
location: region:119774-121669:1
so has part: feature:119774-121669:1:exon

WP_130624083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119774-121669:1:exon

NAREPO1_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: murB
locus tag: NAREPO1_RS00635
old locus tag: NAREPO1_01280
so part of: sequence
location: 121666..122742
location: region:121666-122742:1
so has part: feature:121666-122742:1:exon
subclass of: SO_0000010

position:121666:1
position: 121666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122742:1
position: 122742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121666-122742:1:exon

NAREPO1_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: murB
locus tag: NAREPO1_RS00635
old locus tag: NAREPO1_01280
EC number: 1.3.1.98
inference: COORDINATES: protein motif:HMM:NF000755.0
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MKFISIKKIHSFRLNSKAKKIIKIHSVIDLINIYNMLIIKKINFIIIGNGTNTIFLNNFNGIIIINKILGIKNKSDKINWKLHINSGENWNKIIKYTLKNKIFGLENLAMIPGKIGSASIYNIGAYGSEFKNFCEYVDILNLKNNKIIRFSNKDCKFSYRNSIFKNKNNKKNIFILSIGLIIPKKWKPNISHSIFNNKYFFIKKNITANKIYNFICKIRKKNIPNYNIYGNSGSFFINPIINKKKIKYLKKKYNNIPYSLEKKYKYKIYGGWLIEQCGIKGLIIENFFINDKNSLIIINKGNYNGYNLISIIKIIYYIVLIKFNVKLELEVFLILNNKCINSKKIFTNFLKYNLNLLC
SIO_010081: NAREPO1_RS00635
subclass of: SO_0000673
so part of: NAREPO1_RS00635
location: 121666..122742
location: region:121666-122742:1
so has part: feature:121666-122742:1:exon

WP_130624084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121666-122742:1:exon

NAREPO1_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsP
locus tag: NAREPO1_RS00640
old locus tag: NAREPO1_01290
so part of: sequence
location: 122736..122978
location: region:122736-122978:1
so has part: feature:122736-122978:1:exon
subclass of: SO_0000010

position:122736:1
position: 122736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122978:1
position: 122978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122736-122978:1:exon

NAREPO1_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsP
locus tag: NAREPO1_RS00640
old locus tag: NAREPO1_01290
inference: COORDINATES: protein motif:HMM:TIGR00002.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MLNIKLSKIGRKNKISYRIVVASSKSSKNSKFIEKIGFFNPFDKKNQFNININRFIYWKKCGSKISNRVKFIINKFHYLK
SIO_010081: NAREPO1_RS00640
subclass of: SO_0000673
so part of: NAREPO1_RS00640
location: 122736..122978
location: region:122736-122978:1
so has part: feature:122736-122978:1:exon

WP_130624085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122736-122978:1:exon

NAREPO1_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: trmD
locus tag: NAREPO1_RS00645
old locus tag: NAREPO1_01300
pseudo: true
so part of: sequence
location: 122994..123723
location: region:122994-123723:1
so has part: feature:122994-123723:1:exon
subclass of: SO_0000010

position:122994:1
position: 122994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123723:1
position: 123723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122994-123723:1:exon

NAREPO1_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: trmD
locus tag: NAREPO1_RS00645
old locus tag: NAREPO1_01300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091479.1
GO function: GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
SIO_010081: NAREPO1_RS00645
subclass of: SO_0000673
so part of: NAREPO1_RS00645
location: 122994..123723
location: region:122994-123723:1
so has part: feature:122994-123723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122994-123723:1:exon

NAREPO1_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00650
old locus tag: NAREPO1_01310
so part of: sequence
location: 123739..124056
location: region:123739-124056:1
so has part: feature:123739-124056:1:exon
subclass of: SO_0000010

position:123739:1
position: 123739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124056:1
position: 124056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123739-124056:1:exon

NAREPO1_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00650
old locus tag: NAREPO1_01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070054.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MKNIIKNLNLSQLKNNNLKLKSGYFVDVNFYIDSNKKKNQIFSGLIISIKNKSFLTSIIVRKISYNVGVEKTFYIHAPNIKKIVINKIKKYRKSKLYFLRKISRL
SIO_010081: NAREPO1_RS00650
subclass of: SO_0000673
so part of: NAREPO1_RS00650
location: 123739..124056
location: region:123739-124056:1
so has part: feature:123739-124056:1:exon

WP_232616959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123739-124056:1:exon

NAREPO1_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00655
old locus tag: NAREPO1_01320
so part of: sequence
location: 124160..125206
location: region:124160-125206:1
so has part: feature:124160-125206:1:exon
subclass of: SO_0000010

position:124160:1
position: 124160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125206:1
position: 125206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124160-125206:1:exon

NAREPO1_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00655
old locus tag: NAREPO1_01320
EC number: 2.5.1.54
inference: COORDINATES: protein motif:HMM:NF009395.0
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MITNKNYLEKKIITPKKIKSKYKLNLKNKLKIINNKNTISDIINKKNNKFLIICGPCSISDYKSSIEYGKKLYNLYKKVKNYIYIVMRTYLEKPRTSIGWKGIINDPYINNTNKIEDGIIISRKILVDLIKINIPIGTELLNPIYFKYFDDLFSWISIGARTSESQIHREIVSSLDIPTGFKNSLDGTINSSINSIKSSSTKHTFISIKDDGKICLLDSNGNNNTHIILRGGKNGPNYYSDKINSYIDILKKENLNKSIIIDCSHDNSYKNYKLQKKVSDNIIEQKINGNEYISGIMLESNLFEGNQYCNSLNNLKFGISITDSCIGWDETEYIINNIYKKLKKINKK
SIO_010081: NAREPO1_RS00655
subclass of: SO_0000673
so part of: NAREPO1_RS00655
location: 124160..125206
location: region:124160-125206:1
so has part: feature:124160-125206:1:exon

WP_130624087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124160-125206:1:exon

NAREPO1_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00660
old locus tag: NAREPO1_01330
so part of: sequence
location: 125215..126315
location: region:125215-126315:1
so has part: feature:125215-126315:1:exon
subclass of: SO_0000010

position:125215:1
position: 125215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126315:1
position: 126315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125215-126315:1:exon

NAREPO1_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00660
old locus tag: NAREPO1_01330
EC number: 5.4.99.5
inference: COORDINATES: protein motif:HMM:NF013939.2
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate mutase
translation: MIKNIENIRKKIDIIDNKILDLIEKRLKKVHKLSILKNKLNIPSYIKEREKDVIYNKIIENKRINISNDLIKDILKRIMYESYSIENKYIKIKKYKLYKILFIGKNKNLFKNLFLKSNYKIYELDINFDKKDEKYIKLTNVIFIQVPISEFKITLNKIVHLIKKKCIIIDLSYNKHLSVKIISNYKMPFLSICITKEYDSNYITKNSIIICYLNDKEKFIWFFNQLKLWGINLIELDYTIYNEYIIKNESLKYFIFITYIYLIKNKNIDLEKIFKYSSPLNKIFMCFILFFIKNNELYLENIINFHNIEKYIKEYIYYMNRLLNDIKNKKYLNIKLCINNILKIEKSNILILEKYNNLLLRSLNIY
SIO_010081: NAREPO1_RS00660
subclass of: SO_0000673
so part of: NAREPO1_RS00660
location: 125215..126315
location: region:125215-126315:1
so has part: feature:125215-126315:1:exon

WP_130624088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125215-126315:1:exon

NAREPO1_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00665
old locus tag: NAREPO1_01340
so part of: sequence
location: 126320..127048
location: region:126320-127048:1
so has part: feature:126320-127048:1:exon
subclass of: SO_0000010

position:126320:1
position: 126320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127048:1
position: 127048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126320-127048:1:exon

NAREPO1_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00665
old locus tag: NAREPO1_01340
EC number: 5.4.99.-
inference: COORDINATES: protein motif:HMM:TIGR00005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MNNTNSNIINNINIIYEDEYLFIINKPCNLIVNLNNKYINLINIINNNIKDLSNIENNGLVHRLDKNTTGLIIIAKNNLCYFKLKKLFYKKKIYKEYIGVVTGEMLSGGSIYKSISRDKKRNKMCINEEYGKKSITYYKVIKKLYLHTLIKINIITGRTHQIRVHMSNIGYTLVGDKKYINNNSNYKKSFDFLKKKKFLFERQALHSYKIKFIHPITKKNIKCISKCPDDINKLIKFIEIYS
SIO_010081: NAREPO1_RS00665
subclass of: SO_0000673
so part of: NAREPO1_RS00665
location: 126320..127048
location: region:126320-127048:1
so has part: feature:126320-127048:1:exon

WP_130624089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126320-127048:1:exon

NAREPO1_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aroK
locus tag: NAREPO1_RS00670
old locus tag: NAREPO1_01350
so part of: sequence
location: 127122..127682
location: region:127122-127682:1
so has part: feature:127122-127682:1:exon
subclass of: SO_0000010

position:127122:1
position: 127122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127682:1
position: 127682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127122-127682:1:exon

NAREPO1_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aroK
locus tag: NAREPO1_RS00670
old locus tag: NAREPO1_01350
inference: COORDINATES: protein motif:HMM:NF013375.2
note: type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase
translation: MFKNYTNLILIGHTGSGKTTIANKLSKILNINFFDSDNEIENILSLNINNIFKLYGEQFFREKENEFLIYIKNKSKFILSTGAGILTKKNIKIINKIGIIIYIKLDIKECIKRIINAKNRPLLNNYIKNKNYIDKIFKNRESLYKDISNIIIDANNKNINKILKDILFILNKNLLYKNEKNKNIFK
SIO_010081: NAREPO1_RS00670
subclass of: SO_0000673
so part of: NAREPO1_RS00670
location: 127122..127682
location: region:127122-127682:1
so has part: feature:127122-127682:1:exon

WP_130624090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127122-127682:1:exon

NAREPO1_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aroB
locus tag: NAREPO1_RS00675
old locus tag: NAREPO1_01360
so part of: sequence
location: 127654..128748
location: region:127654-128748:1
so has part: feature:127654-128748:1:exon
subclass of: SO_0000010

position:127654:1
position: 127654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128748:1
position: 128748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127654-128748:1:exon

NAREPO1_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aroB
locus tag: NAREPO1_RS00675
old locus tag: NAREPO1_01360
EC number: 4.2.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011054028.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MKKIKIFSNRIKKYEILIDFDLLNKINIFSKIENNHKIMFITNDFLFKKYFRYIIKKNINNLYYKYYIIPDGEFSKSINILNNIITALLNFNYNKKTYLIAIGGGVIGDLTGFVSSIYLRGIKYVQIPTTLLSQVDSSIGGKTAINHALGKNMIGTFYNPEFVFTDTKFLYSLPNKELLSGIAEIIKYSLILDYNFFIWIEKNIFKILKLDKKTILYCIKKCCTLKSLLINKDEKDLNIRNILNFGHTFGHAIEAFMGYGNWTHGESISAGMIIASKLSFKLNKITYLELNRIKNLILMFKLPIKGPSNMKFNDYINYMNRDKKNSINSNNKININLILLEKIGKAKIVNDININDIKYAIKNH
SIO_010081: NAREPO1_RS00675
subclass of: SO_0000673
so part of: NAREPO1_RS00675
location: 127654..128748
location: region:127654-128748:1
so has part: feature:127654-128748:1:exon

WP_130624091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127654-128748:1:exon

NAREPO1_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: pth
locus tag: NAREPO1_RS00680
old locus tag: NAREPO1_01370
so part of: sequence
location: complement(128745..129308)
location: region:128745-129308:-1
so has part: feature:128745-129308:-1:exon
subclass of: SO_0000010

position:128745:-1
position: 128745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129308:-1
position: 129308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128745-129308:-1:exon

NAREPO1_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: pth
locus tag: NAREPO1_RS00680
old locus tag: NAREPO1_01370
EC number: 3.1.1.29
inference: COORDINATES: protein motif:HMM:NF013368.2
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MNAIIGIGNLNKYTNTRHSIGIYFINKLLKKINLKLIFNKDINGFYCIYNINNIDNIIYIPNSYINNCGYNIKKLLEKYNIKNNNLIVIHDDIYFLPGISKMQFNISDGGHNGIKDIIYNLNSKMFYRIRIGIGKPKLKNFLNNFVLLKPTNLEKKLIDNSINKCIISIFYFINNNPNFAMNYLNRI
SIO_010081: NAREPO1_RS00680
subclass of: SO_0000673
so part of: NAREPO1_RS00680
location: complement(128745..129308)
location: region:128745-129308:-1
so has part: feature:128745-129308:-1:exon

WP_130624092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128745-129308:-1:exon

NAREPO1_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: lolB
locus tag: NAREPO1_RS00685
old locus tag: NAREPO1_01380
so part of: sequence
location: complement(129315..129986)
location: region:129315-129986:-1
so has part: feature:129315-129986:-1:exon
subclass of: SO_0000010

position:129315:-1
position: 129315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129986:-1
position: 129986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129315-129986:-1:exon

NAREPO1_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: lolB
locus tag: NAREPO1_RS00685
old locus tag: NAREPO1_01380
inference: COORDINATES: protein motif:HMM:TIGR00548.1
GO function: GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein insertase outer membrane protein LolB
translation: MYNNFFLKIFIKLIYIFHNKLSFKNNYFLNKNYVENISYINNENLNLNKNKIKWNNHKKNISNIKTFQISGALVYKNGIKRMLLNFYLDNFDKDYFKFELSTFFGLKLMEFVNNSSDSYYKNIGSDPVKNSNPQSLFEQMSKTNIPISNIKNWIIGLPGKYTLFFLNKNGYIREMNYIDDCNKKNYKIFYEYNDNFNPVLPKKIKIIQNDIMLDITIKKWNIN
SIO_010081: NAREPO1_RS00685
subclass of: SO_0000673
so part of: NAREPO1_RS00685
location: complement(129315..129986)
location: region:129315-129986:-1
so has part: feature:129315-129986:-1:exon

WP_130624093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129315-129986:-1:exon

NAREPO1_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00690
old locus tag: NAREPO1_01390
so part of: sequence
location: 130144..131199
location: region:130144-131199:1
so has part: feature:130144-131199:1:exon
subclass of: SO_0000010

position:130144:1
position: 130144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131199:1
position: 131199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130144-131199:1:exon

NAREPO1_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00690
old locus tag: NAREPO1_01390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070149.1
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PCRF domain-containing protein
translation: MNNDIIESIKKINILKLEIEENIYILKKNKNNKNRLEILKNKLNCYNNLIENNLKLIKINNEIYKVSNINDKEIEILIKEEINLLNSEKNNILFNIESIKKSLKKINYNNKGCLIEIKLGTGGNESSLFIENLYKMYIKYFYKKNWNFFLINKILNNKGGYKEIVIKVLNEISYEKLKFESGGHRVQRIPETESKNRIHTSTCIVAVTPIIEENYLKKDINLSDLKIDTFKSSGSGGQHVNTTDSAIRVTHIPTGIVVECQDERSQHRNKSKAISILKSKINFIEEKKIKEKNNIIKKKLLGTGHRIDRIRTYNFVKNRITDHRFNITIYNKLFYILNGELDILLNILEKK
SIO_010081: NAREPO1_RS00690
subclass of: SO_0000673
so part of: NAREPO1_RS00690
location: 130144..131199
location: region:130144-131199:1
so has part: feature:130144-131199:1:exon

WP_130624094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130144-131199:1:exon

NAREPO1_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00695
old locus tag: NAREPO1_01400
so part of: sequence
location: complement(131275..131751)
location: region:131275-131751:-1
so has part: feature:131275-131751:-1:exon
subclass of: SO_0000010

position:131275:-1
position: 131275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131751:-1
position: 131751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131275-131751:-1:exon

NAREPO1_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00695
old locus tag: NAREPO1_01400
inference: COORDINATES: protein motif:HMM:NF016214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MNIKDHIIFNTISIFVLKNFKILKFSIIEWNILLITSIIFSFFPDIDHPISSIGNKLKFISTFINKFFGHRKITHSILFLIIIYFLSKYILYKNNFYLNKSIHYGIILGCINHMLADMLTKHGICLLWPIKFKFKFNKFFLFIIIILIFLLYTYNLHQ
SIO_010081: NAREPO1_RS00695
subclass of: SO_0000673
so part of: NAREPO1_RS00695
location: complement(131275..131751)
location: region:131275-131751:-1
so has part: feature:131275-131751:-1:exon

WP_130624095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131275-131751:-1:exon

NAREPO1_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: thrS
locus tag: NAREPO1_RS00700
old locus tag: NAREPO1_01410
so part of: sequence
location: 131837..133534
location: region:131837-133534:1
so has part: feature:131837-133534:1:exon
subclass of: SO_0000010

position:131837:1
position: 131837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133534:1
position: 133534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131837-133534:1:exon

NAREPO1_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: thrS
locus tag: NAREPO1_RS00700
old locus tag: NAREPO1_01410
EC number: 6.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00418.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MNINNSCSIYLYLLKYSINKMLVHSYIVNFGIIKNYFFCDFIYKKNIKTKNIYDIEKNILNLNTLNKKILKFNIDNINLLKYFKNNKNIYSYNNLKKYTKSNIIYFIYKIDNFIDISLREFNFNININNLNIEKKIYQTWYKNKIIYRICGNEKNTLDIIKNNNNIKKNKFNKLYYIFKESPGMIFWNNNGVIIFNELEKYITEKLFLYDNYFKVKTPIILNSSLWNKTKHSIFYSKNIYNLVINNINYYIKPMNCPCHIKFFLKEVKSYKDLPYRILEFGNCHRNESSGSLHNLMRTRSFFQDDTHIFCSEKDLENEIIKSINIIFEVYNIFNFKNIDIFLSTRPNIKIGNEDIWNNSENIIKNILNKKKIIFNINCGNGAFYGPKIEFVLKDLYNRSWQCGTIQLDFFTSKNLDASYIDNNNNKKFPIIIHRAILGSIERFIGIISNHYLNKYPLWLSPIQIIILSITEKQIDYVKKIFKKILFLKIRVKIDIRNKTLNYKIREHKLNNIPYIIICGEKEKKNKKITIKSINNINYYLISLNKFLKKIIKEINLKKHNEIFNG
SIO_010081: NAREPO1_RS00700
subclass of: SO_0000673
so part of: NAREPO1_RS00700
location: 131837..133534
location: region:131837-133534:1
so has part: feature:131837-133534:1:exon

WP_130624096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131837-133534:1:exon

NAREPO1_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: infC
locus tag: NAREPO1_RS00705
old locus tag: NAREPO1_01420
so part of: sequence
location: 133527..134063
location: region:133527-134063:1
so has part: feature:133527-134063:1:exon
subclass of: SO_0000010

position:133527:1
position: 133527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134063:1
position: 134063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133527-134063:1:exon

NAREPO1_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: infC
locus tag: NAREPO1_RS00705
old locus tag: NAREPO1_01420
inference: COORDINATES: protein motif:HMM:TIGR00168.2
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MVNNKDKIIDNRYLINYDINFEKIRLIDINGKQLGIFYTKDAIKKYKKEDLDLVLINKNINPPICKIINYNKYIYNKNKFLKNLKKKQSFIQIKEIQMKLNIDNNDYLIKLKKIRNFLNKKNRVKIIIKFSGREIVHNSIGFSLFKKIYEELDDICKIHFISNKIEDKQIIMILSSKN
SIO_010081: NAREPO1_RS00705
subclass of: SO_0000673
so part of: NAREPO1_RS00705
location: 133527..134063
location: region:133527-134063:1
so has part: feature:133527-134063:1:exon

WP_130624097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133527-134063:1:exon

NAREPO1_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00710
old locus tag: NAREPO1_01430
so part of: sequence
location: 134076..134279
location: region:134076-134279:1
so has part: feature:134076-134279:1:exon
subclass of: SO_0000010

position:134076:1
position: 134076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134279:1
position: 134279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134076-134279:1:exon

NAREPO1_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00710
old locus tag: NAREPO1_01430
inference: COORDINATES: protein motif:HMM:NF013771.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MNKNNKIKTLKSIKKRFIINNNNKQIKYKHSNTKHLLRKKNSKKKRNLRKLFYLLNKKNKKRILKSI
SIO_010081: NAREPO1_RS00710
subclass of: SO_0000673
so part of: NAREPO1_RS00710
location: 134076..134279
location: region:134076-134279:1
so has part: feature:134076-134279:1:exon

WP_130624098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134076-134279:1:exon

NAREPO1_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplT
locus tag: NAREPO1_RS00715
old locus tag: NAREPO1_01440
so part of: sequence
location: 134308..134655
location: region:134308-134655:1
so has part: feature:134308-134655:1:exon
subclass of: SO_0000010

position:134308:1
position: 134308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134655:1
position: 134655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134308-134655:1:exon

NAREPO1_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplT
locus tag: NAREPO1_RS00715
old locus tag: NAREPO1_01440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005806785.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MTRVNHSVQSRNKHKKILKQAKGYYSARSKNFKSAKQSVIKSCQYSYIHRKVKKRDFRKTWIIKINAELKKNNLSYNNFIFLLKNKKININKKILSYIAEFKQNDFKKIINYIIK
SIO_010081: NAREPO1_RS00715
subclass of: SO_0000673
so part of: NAREPO1_RS00715
location: 134308..134655
location: region:134308-134655:1
so has part: feature:134308-134655:1:exon

WP_130624099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134308-134655:1:exon

NAREPO1_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: pheS
locus tag: NAREPO1_RS00720
old locus tag: NAREPO1_01450
so part of: sequence
location: 134657..135658
location: region:134657-135658:1
so has part: feature:134657-135658:1:exon
subclass of: SO_0000010

position:134657:1
position: 134657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135658:1
position: 135658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134657-135658:1:exon

NAREPO1_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: pheS
locus tag: NAREPO1_RS00720
old locus tag: NAREPO1_01450
EC number: 6.1.1.20
inference: COORDINATES: protein motif:HMM:TIGR00468.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MYKEIKIKLNDILNDIKKYNIKNFYNINDLNIFKSKLIGKKSYIYNIIKNFSNINEINKKDIGKLINIIKNKVNIIYKNNIKNIYLLKKKNNKKFLDITIPTYLNNVGSLNLISIIINKLKNKFLNLGFNIINGKEIEDSKHNFDLLNIHLEHPSRNYNDTFWINDNYLLRTQISSIQTRINNRNIPIKIISYGKVYRKDKGKKHSFMFHQMDGIYIDKNISISNLKFILVNIVKFILNDNDIKIKFRISYFPFTEPSIEMDIFFNDRWIEILGAGMIHNKILKYLNLNNNLYSGFAFGIGIERLIMIKYRIKNIKLLYENNINVLNNFKHKI
SIO_010081: NAREPO1_RS00720
subclass of: SO_0000673
so part of: NAREPO1_RS00720
location: 134657..135658
location: region:134657-135658:1
so has part: feature:134657-135658:1:exon

WP_130624100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134657-135658:1:exon

NAREPO1_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00725
old locus tag: NAREPO1_01460
so part of: sequence
location: 135664..137922
location: region:135664-137922:1
so has part: feature:135664-137922:1:exon
subclass of: SO_0000010

position:135664:1
position: 135664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137922:1
position: 137922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135664-137922:1:exon

NAREPO1_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00725
old locus tag: NAREPO1_01460
inference: COORDINATES: protein motif:HMM:NF036799.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFSLNLIKNNFITETKVNLIKLINNLKKIGIEINSKNKIFNNKINIFIGKIIFKKKNKNNIFLLKIKSKYIKLIDIYTNISIFKKGQIILLIKEISNINKENKYYISNNVFFKLNIKKIKIGTNINKFININKDTILDISIPFNRPDCTNILGLLREINKTKFLNKYKNNNIKNICNNDIYKIDLDIKCNNFIYYYNYIIKDLNINNSTSIIIKNILNIHNINIKNNIEDIVKYVFLQTGYYVHIIDYEFIKNNKIIIECIKNEKNECGILNIKNNNFSFIPNIENNIFINKNTKEIFIGCIIFIPNNINDYLYNKYLKNNYYKLLNNTDPFFVDILMNNLSKLIINTYGGICKNKIKIFNNKIKNKIININFDKIRKIIGLPIRNCTIINILKKIYCKYKIIKNNLTINIPYYRSDLNYEEDIIEEVLKNYNINNIPCKKILSNLNINNYDANEYLNKIKNFLVFNGYNEVINFSISNSKLQKIFYKKNKFVYIKNPLSNKLNTMRISLLTGLLNNVIYNINRKIYKIKIFEIGNCFENNNKFIETEFLSTLNLINNDFIKNDISYDNIFNKIKSEIEDILLLFINNNDFFFKKKNVYFLNKNNSIYIYNKKKILGILGILNNKLIKNKNINNYSIIYSEINLSYLKNIKKNIKNNNVNNNISKFNLIDRDISIEINLNINIDNIIASLYSYNSNIYKIEIKEFYIKNNNKCLLLRIYIKYIKHIKNSYINKFIISCLEYLKKKFNIYYK
SIO_010081: NAREPO1_RS00725
subclass of: SO_0000673
so part of: NAREPO1_RS00725
location: 135664..137922
location: region:135664-137922:1
so has part: feature:135664-137922:1:exon

WP_130624101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135664-137922:1:exon

NAREPO1_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00730
old locus tag: NAREPO1_01470
so part of: sequence
location: 137952..139166
location: region:137952-139166:1
so has part: feature:137952-139166:1:exon
subclass of: SO_0000010

position:137952:1
position: 137952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139166:1
position: 139166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137952-139166:1:exon

NAREPO1_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00730
old locus tag: NAREPO1_01470
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MYCVKKIRSYFPIFKKKNRLYLDNAASTYKPISVINKEYNFYKYEYLSYNKSLYSNSLNNKVEYTRKIISKFINSNYNEIIFTKGATESINLVSNSLLYNNEFLKKGDNIIISNIEHHSNFVTWKFLLKKKNIEIKILPINKKNGYFKKNFLKKIINNKTKFISITHVSNVLGVLNDIEEIICIIKNINKNILVLVDGSQAISHIKVDVKKINCDFYVFSGHKMYGPLGIGILYGKKKILDKMKPWQLGGSIIKNIYNNKIIFVDSPWKFETGTMNSASVIGINESIKFINKIGINNIYNWENKILEYSINKLKKIKDIIIYCDNIYNKLSIISFNIKNINCNDIGFLLKNSNIYIRTGHQCSIPIMNLYKISGVCRISYAMYTNFDDIDFFIENLKFIKKKFF
SIO_010081: NAREPO1_RS00730
subclass of: SO_0000673
so part of: NAREPO1_RS00730
location: 137952..139166
location: region:137952-139166:1
so has part: feature:137952-139166:1:exon

WP_130624102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137952-139166:1:exon

NAREPO1_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00735
old locus tag: NAREPO1_01480
so part of: sequence
location: 139169..139615
location: region:139169-139615:1
so has part: feature:139169-139615:1:exon
subclass of: SO_0000010

position:139169:1
position: 139169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139615:1
position: 139615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139169-139615:1:exon

NAREPO1_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00735
old locus tag: NAREPO1_01480
inference: COORDINATES: protein motif:HMM:NF014688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SufE family protein
translation: MLNNNFILIKSINNSNTNINNILYDFNKINNLIDKYKYIIKLEKNLLKDNSIRNKNTIINSCDSNIWFYCLYNNKRIIMFSDSESLIMKGLISIIHIYFNNKNIDFFLNKKNIHYIIENIFIKKLKIKNYKFINIYQFMKYKILKIIK
SIO_010081: NAREPO1_RS00735
subclass of: SO_0000673
so part of: NAREPO1_RS00735
location: 139169..139615
location: region:139169-139615:1
so has part: feature:139169-139615:1:exon

WP_130624103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139169-139615:1:exon

NAREPO1_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: def
locus tag: NAREPO1_RS00740
old locus tag: NAREPO1_01490
so part of: sequence
location: 139784..140236
location: region:139784-140236:1
so has part: feature:139784-140236:1:exon
subclass of: SO_0000010

position:139784:1
position: 139784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140236:1
position: 140236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139784-140236:1:exon

NAREPO1_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: def
locus tag: NAREPO1_RS00740
old locus tag: NAREPO1_01490
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499627.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MSILSILIYPDENLRKKAELVSDKENLNEINIFVKNMFDTMYYYNGIGLSATQVNIHKQIITIDIDNNKIVLINPIIKNKKGYVSFCEGCLSIPNFFLNIIRYKNIEIEYLDIDLKKKKLKASNILSSCIQHEIDHLYGILIIDHLKKNK
SIO_010081: NAREPO1_RS00740
subclass of: SO_0000673
so part of: NAREPO1_RS00740
location: 139784..140236
location: region:139784-140236:1
so has part: feature:139784-140236:1:exon

WP_130624104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139784-140236:1:exon

NAREPO1_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00745
old locus tag: NAREPO1_01500
so part of: sequence
location: 140241..141167
location: region:140241-141167:1
so has part: feature:140241-141167:1:exon
subclass of: SO_0000010

position:140241:1
position: 140241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141167:1
position: 141167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140241-141167:1:exon

NAREPO1_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00745
old locus tag: NAREPO1_01500
inference: COORDINATES: protein motif:HMM:NF012760.2
GO function: GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formyltransferase family protein
translation: MFLKKNNLKIIFMGSCYFSLNQLFILNKKYIISLIIFKEKINFYKIKEFAIKNKIFFLKIKNFSNEIINIIKNINPDIIIVSSFGLLLNNTILNIPKYGCINIHPSLLPSLKGPAPIYWAIIKNYKYTGISIIKMNDIFDNGNIIFQIKYKIKKHFDYKYLSNKLSNMSGIVLNNILEKIEYYINLKVKNNYIESYARKITKSDALLNFNNNSFLEYKKIKSFNIWPICYFIFNDKKIKIIDSKYRFSKIKFNKKIGNIFFFKKKVFIILKYGLLEIIKIKIQNKKNILYMRNDIFTFFNNLKKKTIF
SIO_010081: NAREPO1_RS00745
subclass of: SO_0000673
so part of: NAREPO1_RS00745
location: 140241..141167
location: region:140241-141167:1
so has part: feature:140241-141167:1:exon

WP_130624105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140241-141167:1:exon

NAREPO1_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplQ
locus tag: NAREPO1_RS00750
old locus tag: NAREPO1_01510
so part of: sequence
location: complement(141157..141519)
location: region:141157-141519:-1
so has part: feature:141157-141519:-1:exon
subclass of: SO_0000010

position:141157:-1
position: 141157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141519:-1
position: 141519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141157-141519:-1:exon

NAREPO1_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplQ
locus tag: NAREPO1_RS00750
old locus tag: NAREPO1_01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013878028.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MNHKIIGRHLNRTRSHYKLMLRNMCNSLIKYEKIKTTLQKAKELRRVIEKIINISKKNCLHNKRIIFSKIRNMENTKKTINVFGKYFSNINGGYTKIIKYYKFRNGDNANMVYIIINIKK
SIO_010081: NAREPO1_RS00750
subclass of: SO_0000673
so part of: NAREPO1_RS00750
location: complement(141157..141519)
location: region:141157-141519:-1
so has part: feature:141157-141519:-1:exon

WP_130624106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141157-141519:-1:exon

NAREPO1_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00755
old locus tag: NAREPO1_01520
so part of: sequence
location: complement(141539..142555)
location: region:141539-142555:-1
so has part: feature:141539-142555:-1:exon
subclass of: SO_0000010

position:141539:-1
position: 141539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142555:-1
position: 142555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141539-142555:-1:exon

NAREPO1_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00755
old locus tag: NAREPO1_01520
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070372.1
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MKNLDTNINVENISKKESIITLSPLEKGFGHTIGNSMRRILLSSIPGYAITEIEIDNIFHEYSNKYGIKEDIINIILNIKEISIKLINDDIGILNIYKNEIGPVKSSDITSDKEFFIYNKDHVICNITKNDVSINIKMKIQKGIGYISSSEINNKYINYNEKNIMSHKIFIDAIYNPIENVSYKIETTKFKENLDLDKLIIHIITNGTIDSKYAIEYASKLLINKLNIFNFNNYNNNINNNNNEKIIIKNNNNLEKNNVNPILFKSIDNLDLTVRSYNCLKLESINYVYDLVSKTEFELLKIPNLGKKSLLEIKNILSLYELKLGMNINDKNLLNLKK
SIO_010081: NAREPO1_RS00755
subclass of: SO_0000673
so part of: NAREPO1_RS00755
location: complement(141539..142555)
location: region:141539-142555:-1
so has part: feature:141539-142555:-1:exon

WP_130624107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141539-142555:-1:exon

NAREPO1_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsD
locus tag: NAREPO1_RS00760
old locus tag: NAREPO1_01530
so part of: sequence
location: complement(142585..143205)
location: region:142585-143205:-1
so has part: feature:142585-143205:-1:exon
subclass of: SO_0000010

position:142585:-1
position: 142585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143205:-1
position: 143205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142585-143205:-1:exon

NAREPO1_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsD
locus tag: NAREPO1_RS00760
old locus tag: NAREPO1_01530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004589199.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MSKYIGPKLKLIRREKTDLYLKSGIKNIENKCKINQTPGQIHLRKSRISNYSIQLREKQKLKRIYCILEKQFYNYYKKSIKKKRNTGVVLLQMLESRLDNIVYRMGFGSTRLESRQLINHKLIKVNGKIINIPSYNLLPNSKIELSEKMINNVKIKFSINLMKNRENIPWVNINENELYGFFLYIPDRKEFLKEINENLIIEFYSR
SIO_010081: NAREPO1_RS00760
subclass of: SO_0000673
so part of: NAREPO1_RS00760
location: complement(142585..143205)
location: region:142585-143205:-1
so has part: feature:142585-143205:-1:exon

WP_130624108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142585-143205:-1:exon

NAREPO1_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsK
locus tag: NAREPO1_RS00765
old locus tag: NAREPO1_01540
so part of: sequence
location: complement(143261..143656)
location: region:143261-143656:-1
so has part: feature:143261-143656:-1:exon
subclass of: SO_0000010

position:143261:-1
position: 143261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143656:-1
position: 143656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143261-143656:-1:exon

NAREPO1_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsK
locus tag: NAREPO1_RS00765
old locus tag: NAREPO1_01540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353969.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MKKIKFLKKIKKKRKQINEGIVNIHSSFNNTIINITDLYGNTLGWATSGSSGFKGHRKSTPFAAQIAAEKCSKYVKENYGLEFVYVKVSGPGPGRESVIRAIYNSGFQINSIMDVTPIPHNGCKPPKKRRV
SIO_010081: NAREPO1_RS00765
subclass of: SO_0000673
so part of: NAREPO1_RS00765
location: complement(143261..143656)
location: region:143261-143656:-1
so has part: feature:143261-143656:-1:exon

WP_130624109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143261-143656:-1:exon

NAREPO1_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsM
locus tag: NAREPO1_RS00770
old locus tag: NAREPO1_01550
so part of: sequence
location: complement(143682..144029)
location: region:143682-144029:-1
so has part: feature:143682-144029:-1:exon
subclass of: SO_0000010

position:143682:-1
position: 143682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144029:-1
position: 144029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143682-144029:-1:exon

NAREPO1_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsM
locus tag: NAREPO1_RS00770
old locus tag: NAREPO1_01550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015482518.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MIRIYGVNIPDNKQILIALTYIFGIGISTSRKICNKLNIKYSTKICDIDSKLIDEIRKEISYINIEGDLKKNILSNIKRLINIGSYRGIRHKRGLPTRGQRTKTNAKTRKKYKIF
SIO_010081: NAREPO1_RS00770
subclass of: SO_0000673
so part of: NAREPO1_RS00770
location: complement(143682..144029)
location: region:143682-144029:-1
so has part: feature:143682-144029:-1:exon

WP_130624192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143682-144029:-1:exon

NAREPO1_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmJ
locus tag: NAREPO1_RS00775
old locus tag: NAREPO1_01560
so part of: sequence
location: complement(144074..144190)
location: region:144074-144190:-1
so has part: feature:144074-144190:-1:exon
subclass of: SO_0000010

position:144074:-1
position: 144074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144190:-1
position: 144190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144074-144190:-1:exon

NAREPO1_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmJ
locus tag: NAREPO1_RS00775
old locus tag: NAREPO1_01560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020210089.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRVSIKKICNNCKIIKRNSIIRVICNKNQKHKQRQK
SIO_010081: NAREPO1_RS00775
subclass of: SO_0000673
so part of: NAREPO1_RS00775
location: complement(144074..144190)
location: region:144074-144190:-1
so has part: feature:144074-144190:-1:exon

WP_130624110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144074-144190:-1:exon

NAREPO1_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00780
old locus tag: NAREPO1_01570
so part of: sequence
location: complement(144212..145498)
location: region:144212-145498:-1
so has part: feature:144212-145498:-1:exon
subclass of: SO_0000010

position:144212:-1
position: 144212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145498:-1
position: 145498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144212-145498:-1:exon

NAREPO1_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00780
old locus tag: NAREPO1_01570
inference: COORDINATES: protein motif:HMM:NF012564.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYNFFSFNIGKKFIKIILFLILFRIGSFIPIYNIKMSFIVNKFIDFNDHPILKIYNLFSGGSLVKFSIFSMGMMPYISSTILIQFLSNTVPYFIKLKNDFNSKNIYNLYIYIFTFIISIINSFITLLSINRIFNIIDINIISFIFSMISLISGTFILIWLSNKITDIGIGNGGSIMVFIGIINNLPTYVTKIIKKIFNNSIKFEIILLILILIILYILIYAITFIECSQRKIIINYPKQYIFNKNFTNIFSPSYLPIKINISGIMPISFSSTLITFFRMLIYNIYIYTKFNIFNLILLFLKSGTLSYIIIYAILIFIFNYAYSFISFNISNTSNNLKKSGILIPGIRPGINTEIYLSKIINNLIFISFLYIFFIYIITEMLNKINLINVSGSSLLIVVVISIEIINQLQNNLISNKYSLILKKLNLDY
SIO_010081: NAREPO1_RS00780
subclass of: SO_0000673
so part of: NAREPO1_RS00780
location: complement(144212..145498)
location: region:144212-145498:-1
so has part: feature:144212-145498:-1:exon

WP_130624111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144212-145498:-1:exon

NAREPO1_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplO
locus tag: NAREPO1_RS00785
old locus tag: NAREPO1_01580
so part of: sequence
location: complement(145533..145970)
location: region:145533-145970:-1
so has part: feature:145533-145970:-1:exon
subclass of: SO_0000010

position:145533:-1
position: 145533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145970:-1
position: 145970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145533-145970:-1:exon

NAREPO1_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplO
locus tag: NAREPO1_RS00785
old locus tag: NAREPO1_01580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011282757.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MKLNNIKCSKGSKKKKKRICRGISSGYGKTGGRGHKGQKSRSGSKIRINFEGGQTPFYRKVPKYGFKNNINKNIYKKTLTTNDIKKIHSNIINLDILKENKLINKSIKEVKIILKDKIINPISIIGLKLSNGVINNIKLIGGKIE
SIO_010081: NAREPO1_RS00785
subclass of: SO_0000673
so part of: NAREPO1_RS00785
location: complement(145533..145970)
location: region:145533-145970:-1
so has part: feature:145533-145970:-1:exon

WP_130624112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145533-145970:-1:exon

NAREPO1_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsE
locus tag: NAREPO1_RS00790
old locus tag: NAREPO1_01590
so part of: sequence
location: complement(145991..146473)
location: region:145991-146473:-1
so has part: feature:145991-146473:-1:exon
subclass of: SO_0000010

position:145991:-1
position: 145991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146473:-1
position: 146473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145991-146473:-1:exon

NAREPO1_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsE
locus tag: NAREPO1_RS00790
old locus tag: NAREPO1_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126490.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MEFIEKLISIKRVSKTVKGGRIFSFSSLTVVGNQNGKVGFGYGKSKEAPISIQKSINNAYKNIIDIYINSNKSIYYESYGKYIKSKVLIKPSKGTGIIAGNTVRLIFQLSGIKNIITKIYGSTNPINVVKATIIAIKKIKSIQYLSRKRNKNIKYLLINK
SIO_010081: NAREPO1_RS00790
subclass of: SO_0000673
so part of: NAREPO1_RS00790
location: complement(145991..146473)
location: region:145991-146473:-1
so has part: feature:145991-146473:-1:exon

WP_130624113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145991-146473:-1:exon

NAREPO1_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplR
locus tag: NAREPO1_RS00795
old locus tag: NAREPO1_01600
so part of: sequence
location: complement(146512..146886)
location: region:146512-146886:-1
so has part: feature:146512-146886:-1:exon
subclass of: SO_0000010

position:146512:-1
position: 146512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146886:-1
position: 146886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146512-146886:-1:exon

NAREPO1_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplR
locus tag: NAREPO1_RS00795
old locus tag: NAREPO1_01600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053998.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MKIKNKFIHNKIKSKKIKKKIKNKNTNIFTVYRTSRHIYAKILSVDKSKIEVYASTTEKKILKLLIDKKIYTGNRKSAEIIGEIIAKRAIEKNIKKVIFNRSRFKFHGRIKSLANSSRNNGLIF
SIO_010081: NAREPO1_RS00795
subclass of: SO_0000673
so part of: NAREPO1_RS00795
location: complement(146512..146886)
location: region:146512-146886:-1
so has part: feature:146512-146886:-1:exon

WP_130624114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146512-146886:-1:exon

NAREPO1_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplF
locus tag: NAREPO1_RS00800
old locus tag: NAREPO1_01610
so part of: sequence
location: complement(146890..147453)
location: region:146890-147453:-1
so has part: feature:146890-147453:-1:exon
subclass of: SO_0000010

position:146890:-1
position: 146890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147453:-1
position: 147453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146890-147453:-1:exon

NAREPO1_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplF
locus tag: NAREPO1_RS00800
old locus tag: NAREPO1_01610
inference: COORDINATES: protein motif:HMM:NF012567.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MIKNIKKNKKIKNILLIPDNINIDIKKDNIISVCGKLGKINILFNKFLEINIYNKKIIINPINNYFRINIKSLIHTYISLIKNAIIGVDIGYTKNLILYGIGYKVELKDNFLIFNLGFSHSILYKIPNNINIICKNNIELSINGIDKQFVGQVSSDIFNLKKPDPYKGKGVRYLGQKIFLKESKKVK
SIO_010081: NAREPO1_RS00800
subclass of: SO_0000673
so part of: NAREPO1_RS00800
location: complement(146890..147453)
location: region:146890-147453:-1
so has part: feature:146890-147453:-1:exon

WP_130624115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146890-147453:-1:exon

NAREPO1_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsH
locus tag: NAREPO1_RS00805
old locus tag: NAREPO1_01620
so part of: sequence
location: complement(147468..147854)
location: region:147468-147854:-1
so has part: feature:147468-147854:-1:exon
subclass of: SO_0000010

position:147468:-1
position: 147468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147854:-1
position: 147854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147468-147854:-1:exon

NAREPO1_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsH
locus tag: NAREPO1_RS00805
old locus tag: NAREPO1_01620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315388.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MNIQCTLSDMFIRIKNTKFNKKKNIYCFNSKINKNILNILCKEGYINKFNIFKKYIIEINLKYYKNNSVIDDIILISKPSLRVYYNINKIKKISIKNGIIIISTSKGIMTHKDARFFNIGGEAICYVY
SIO_010081: NAREPO1_RS00805
subclass of: SO_0000673
so part of: NAREPO1_RS00805
location: complement(147468..147854)
location: region:147468-147854:-1
so has part: feature:147468-147854:-1:exon

WP_130624116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147468-147854:-1:exon

NAREPO1_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsN
locus tag: NAREPO1_RS00810
old locus tag: NAREPO1_01630
so part of: sequence
location: complement(147862..148167)
location: region:147862-148167:-1
so has part: feature:147862-148167:-1:exon
subclass of: SO_0000010

position:147862:-1
position: 147862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148167:-1
position: 148167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147862-148167:-1:exon

NAREPO1_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsN
locus tag: NAREPO1_RS00810
old locus tag: NAREPO1_01630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011282752.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MTKKSIIFRNNKRILLYNKYYKKRLYLKKIISNKNIQEKERWESMLKLQKLPKNSCKIRIRNRCYITGRSRSYLRRFGLSRIKLREMAMLGLIPGLKKSSW
SIO_010081: NAREPO1_RS00810
subclass of: SO_0000673
so part of: NAREPO1_RS00810
location: complement(147862..148167)
location: region:147862-148167:-1
so has part: feature:147862-148167:-1:exon

WP_130624117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147862-148167:-1:exon

NAREPO1_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplE
locus tag: NAREPO1_RS00815
old locus tag: NAREPO1_01640
so part of: sequence
location: complement(148179..148721)
location: region:148179-148721:-1
so has part: feature:148179-148721:-1:exon
subclass of: SO_0000010

position:148179:-1
position: 148179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148721:-1
position: 148721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148179-148721:-1:exon

NAREPO1_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplE
locus tag: NAREPO1_RS00815
old locus tag: NAREPO1_01640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010946090.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MSILKLYKDYVINNMMEKFNYKSIMEVPYIYKITLNIGIGHLASDKNILNKYIKNISLISGQKPILTKSKKSISNFKIRENFVIGCKVTLRKYNMWLFIDRLIYITIPRIRDFKGLSIKSFDKFGNYNFGIKEQIVFTEVDYNESNNMKGLDICISIKSKKISESLELLKLLNFPLKIEN
SIO_010081: NAREPO1_RS00815
subclass of: SO_0000673
so part of: NAREPO1_RS00815
location: complement(148179..148721)
location: region:148179-148721:-1
so has part: feature:148179-148721:-1:exon

WP_130624118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148179-148721:-1:exon

NAREPO1_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplX
locus tag: NAREPO1_RS00820
old locus tag: NAREPO1_01650
so part of: sequence
location: complement(148730..148951)
location: region:148730-148951:-1
so has part: feature:148730-148951:-1:exon
subclass of: SO_0000010

position:148730:-1
position: 148730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148951:-1
position: 148951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148730-148951:-1:exon

NAREPO1_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplX
locus tag: NAREPO1_RS00820
old locus tag: NAREPO1_01650
inference: COORDINATES: protein motif:HMM:TIGR01079.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MKYKIKLNDVVKIIYGKDKGKIGKIIKIKNNFVFVENVKLVKKHVKPSPNLNRVGGIIYIESKIHISNVTLIK
SIO_010081: NAREPO1_RS00820
subclass of: SO_0000673
so part of: NAREPO1_RS00820
location: complement(148730..148951)
location: region:148730-148951:-1
so has part: feature:148730-148951:-1:exon

WP_232616960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148730-148951:-1:exon

NAREPO1_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplN
locus tag: NAREPO1_RS00825
old locus tag: NAREPO1_01660
so part of: sequence
location: complement(148978..149352)
location: region:148978-149352:-1
so has part: feature:148978-149352:-1:exon
subclass of: SO_0000010

position:148978:-1
position: 148978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149352:-1
position: 149352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148978-149352:-1:exon

NAREPO1_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplN
locus tag: NAREPO1_RS00825
old locus tag: NAREPO1_01660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126483.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQEQSILYVADNSGAKKVLCIKVLGGSRKKYAYIGDIIKISVKEILNNKSKVKKGEVLKALIIRIKKKIYRKDGTFIKFDNNFCILLNDKTLQPIGTRIFGPVTKELRDKNFMKIISLANEVL
SIO_010081: NAREPO1_RS00825
subclass of: SO_0000673
so part of: NAREPO1_RS00825
location: complement(148978..149352)
location: region:148978-149352:-1
so has part: feature:148978-149352:-1:exon

WP_130624120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148978-149352:-1:exon

NAREPO1_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsQ
locus tag: NAREPO1_RS00830
old locus tag: NAREPO1_01670
so part of: sequence
location: complement(149364..149615)
location: region:149364-149615:-1
so has part: feature:149364-149615:-1:exon
subclass of: SO_0000010

position:149364:-1
position: 149364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149615:-1
position: 149615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149364-149615:-1:exon

NAREPO1_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsQ
locus tag: NAREPO1_RS00830
old locus tag: NAREPO1_01670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126482.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MNNLKICKFLKCCVIKKNGNKSIIASYLRIKKHNLYKKNIKLNIKIKIHDEYNISNIGDIILVRYFRPISKTKSWILYKKINS
SIO_010081: NAREPO1_RS00830
subclass of: SO_0000673
so part of: NAREPO1_RS00830
location: complement(149364..149615)
location: region:149364-149615:-1
so has part: feature:149364-149615:-1:exon

WP_130624121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149364-149615:-1:exon

NAREPO1_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmC
locus tag: NAREPO1_RS00835
old locus tag: NAREPO1_01680
so part of: sequence
location: complement(149620..149802)
location: region:149620-149802:-1
so has part: feature:149620-149802:-1:exon
subclass of: SO_0000010

position:149620:-1
position: 149620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149802:-1
position: 149802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149620-149802:-1:exon

NAREPO1_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmC
locus tag: NAREPO1_RS00835
old locus tag: NAREPO1_01680
inference: COORDINATES: protein motif:HMM:TIGR00012.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKYNENVYNKLLMMLNNKIKLKIKLANNLLKKTHLIKKNNKNIARIKMMISYKKKNNNKK
SIO_010081: NAREPO1_RS00835
subclass of: SO_0000673
so part of: NAREPO1_RS00835
location: complement(149620..149802)
location: region:149620-149802:-1
so has part: feature:149620-149802:-1:exon

WP_130624122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149620-149802:-1:exon

NAREPO1_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplP
locus tag: NAREPO1_RS00840
old locus tag: NAREPO1_01690
so part of: sequence
location: complement(149792..150205)
location: region:149792-150205:-1
so has part: feature:149792-150205:-1:exon
subclass of: SO_0000010

position:149792:-1
position: 149792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150205:-1
position: 150205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149792-150205:-1:exon

NAREPO1_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplP
locus tag: NAREPO1_RS00840
old locus tag: NAREPO1_01690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888898.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKNSKYTKCHKSKTKGILNMFINFGSFAIVSMESGRITSFQIESTRRVITKILKKESKIWIRIFPDKPFTKKPLEVRMGKGKGNLEYWVSFIKPGSILYEIDNVDEKLANKSCKHASFKLPIKIILMKKRLYEI
SIO_010081: NAREPO1_RS00840
subclass of: SO_0000673
so part of: NAREPO1_RS00840
location: complement(149792..150205)
location: region:149792-150205:-1
so has part: feature:149792-150205:-1:exon

WP_130624123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149792-150205:-1:exon

NAREPO1_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsC
locus tag: NAREPO1_RS00845
old locus tag: NAREPO1_01700
so part of: sequence
location: complement(150219..150845)
location: region:150219-150845:-1
so has part: feature:150219-150845:-1:exon
subclass of: SO_0000010

position:150219:-1
position: 150219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150845:-1
position: 150845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150219-150845:-1:exon

NAREPO1_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsC
locus tag: NAREPO1_RS00845
old locus tag: NAREPO1_01700
inference: COORDINATES: protein motif:HMM:TIGR01009.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVNPIIFRLGINKFWNSIWYSDKKKFLDNLRNDYLIRNFINIYLHKVPISNIIIERLSSNIIINIYTSKPGIIIGKKGEDLIKLKNKISGISKIETLIKVFEVKNPELDAKLISENISFQIKKKKSFRKVIKRYIQQSMKYGALGIKIKISGRLGGSDIARSEWYKEGRIPLHTIRSNIDYNCSICKTTYGIIGIKVWVFKGMIF
SIO_010081: NAREPO1_RS00845
subclass of: SO_0000673
so part of: NAREPO1_RS00845
location: complement(150219..150845)
location: region:150219-150845:-1
so has part: feature:150219-150845:-1:exon

WP_130624124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150219-150845:-1:exon

NAREPO1_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplV
locus tag: NAREPO1_RS00850
old locus tag: NAREPO1_01710
so part of: sequence
location: complement(150829..151185)
location: region:150829-151185:-1
so has part: feature:150829-151185:-1:exon
subclass of: SO_0000010

position:150829:-1
position: 150829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151185:-1
position: 151185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150829-151185:-1:exon

NAREPO1_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplV
locus tag: NAREPO1_RS00850
old locus tag: NAREPO1_01710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070352.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MNIYSKYKFAKSSDLKLRIVANSINKKLSAEKNMHILSLSNKKSSFLINKALKSAIFNAINNYNININDLFIEKILINKGPYIKKVFPRAKGRVNYIKKRTSHIIIKLNIKKKDGTKS
SIO_010081: NAREPO1_RS00850
subclass of: SO_0000673
so part of: NAREPO1_RS00850
location: complement(150829..151185)
location: region:150829-151185:-1
so has part: feature:150829-151185:-1:exon

WP_130624125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150829-151185:-1:exon

NAREPO1_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsS
locus tag: NAREPO1_RS00855
old locus tag: NAREPO1_01720
so part of: sequence
location: complement(151193..151474)
location: region:151193-151474:-1
so has part: feature:151193-151474:-1:exon
subclass of: SO_0000010

position:151193:-1
position: 151193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151474:-1
position: 151474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151193-151474:-1:exon

NAREPO1_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsS
locus tag: NAREPO1_RS00855
old locus tag: NAREPO1_01720
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312208.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MSRSVKKGPFIDLHLIKKVDNLLKNKDNKIIKTWSRRSVIFPKMIGLTIAVHNGKKHIPVYITEEMVGHKLGEFSPTRTYKGHITKNKKINKK
SIO_010081: NAREPO1_RS00855
subclass of: SO_0000673
so part of: NAREPO1_RS00855
location: complement(151193..151474)
location: region:151193-151474:-1
so has part: feature:151193-151474:-1:exon

WP_130624126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151193-151474:-1:exon

NAREPO1_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplB
locus tag: NAREPO1_RS00860
old locus tag: NAREPO1_01730
so part of: sequence
location: complement(151480..152310)
location: region:151480-152310:-1
so has part: feature:151480-152310:-1:exon
subclass of: SO_0000010

position:151480:-1
position: 151480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152310:-1
position: 152310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151480-152310:-1:exon

NAREPO1_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplB
locus tag: NAREPO1_RS00860
old locus tag: NAREPO1_01730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126476.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MKSNIIKYKPTSPGIRHLRRLKNNFLFKGKNKNKKMIFPIKKTGGRNNQGKITVRHIGGGHKRKYRIIDFKRNKDNIFAKVIRLEYDPNRSCNIALIVYSDGIKKYILLPKNLNIGDKIISGSKVDIKIGNCMEIKNIPIGTNIHNIEMLPKKGGKISRSAGSYSQLLSKDKKYSIIKLKSGEIRKILSSCRATIGEVGNEKMFLQSLGKAGANRWRGTRPTVRGTAMNPVDHPHGGGEGKNFGKHPVTPLGIKTKGKKTRKNKRTNKFIIKKRKK
SIO_010081: NAREPO1_RS00860
subclass of: SO_0000673
so part of: NAREPO1_RS00860
location: complement(151480..152310)
location: region:151480-152310:-1
so has part: feature:151480-152310:-1:exon

WP_130624127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151480-152310:-1:exon

NAREPO1_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplW
locus tag: NAREPO1_RS00865
old locus tag: NAREPO1_01740
so part of: sequence
location: complement(152300..152653)
location: region:152300-152653:-1
so has part: feature:152300-152653:-1:exon
subclass of: SO_0000010

position:152300:-1
position: 152300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152653:-1
position: 152653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152300-152653:-1:exon

NAREPO1_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplW
locus tag: NAREPO1_RS00865
old locus tag: NAREPO1_01740
inference: COORDINATES: protein motif:HMM:NF012498.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MIINIKNLYLFDIIKNIYISEKSNFLLEKSNILVFKVNNKYNKIDIKRSIVYFFNLKIKKINVCLVKKKKNKKIKNNKFGYSKLWKKVYVILESNQKKIFLNKLNEINSSNIIDYEK
SIO_010081: NAREPO1_RS00865
subclass of: SO_0000673
so part of: NAREPO1_RS00865
location: complement(152300..152653)
location: region:152300-152653:-1
so has part: feature:152300-152653:-1:exon

WP_130624128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152300-152653:-1:exon

NAREPO1_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplD
locus tag: NAREPO1_RS00870
old locus tag: NAREPO1_01750
so part of: sequence
location: complement(152650..153258)
location: region:152650-153258:-1
so has part: feature:152650-153258:-1:exon
subclass of: SO_0000010

position:152650:-1
position: 152650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153258:-1
position: 153258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152650-153258:-1:exon

NAREPO1_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplD
locus tag: NAREPO1_RS00870
old locus tag: NAREPO1_01750
inference: COORDINATES: protein motif:HMM:TIGR03953.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MKIILKDTKKEIDILDNIFNVKYNESVIHQVYVSYLSNIRQNTKLNKNRSNVSGSNKKPWKQKGTGKARSGCIRSPIWRSGGVTFGNQRKNYVCKINKKMYKLACKSMFSKFININSFIVFNEFYVNSIKTKYLYNKIFNIVKKNKTVILIDKYNEYLIKSSNNIYFLYVKCIFDINLISLLNFNYIILTEFTLRNLEKLLL
SIO_010081: NAREPO1_RS00870
subclass of: SO_0000673
so part of: NAREPO1_RS00870
location: complement(152650..153258)
location: region:152650-153258:-1
so has part: feature:152650-153258:-1:exon

WP_130624129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152650-153258:-1:exon

NAREPO1_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplC
locus tag: NAREPO1_RS00875
old locus tag: NAREPO1_01760
so part of: sequence
location: complement(153278..153904)
location: region:153278-153904:-1
so has part: feature:153278-153904:-1:exon
subclass of: SO_0000010

position:153278:-1
position: 153278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153904:-1
position: 153904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153278-153904:-1:exon

NAREPO1_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplC
locus tag: NAREPO1_RS00875
old locus tag: NAREPO1_01760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070347.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MIYMIGFKCGMTRFFLESGSIPITVIKIFDNRIISIDNINNNRSIIKITSGVKLKKKFNKPFLGIFNKKKITPSSIIKSFIIDNDYLKNNIKDNLFIKLDYFLNFSKVNITGISKGKGFSGVIKRWNFKSQDASHGNSLSHRASGSIGQNQSPGRVHKGKKMAGHYGCDKITIKNIKIFKIDINNKLLFVKGSIPGYNNNNVYIKFVC
SIO_010081: NAREPO1_RS00875
subclass of: SO_0000673
so part of: NAREPO1_RS00875
location: complement(153278..153904)
location: region:153278-153904:-1
so has part: feature:153278-153904:-1:exon

WP_130624130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153278-153904:-1:exon

NAREPO1_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsJ
locus tag: NAREPO1_RS00880
old locus tag: NAREPO1_01770
so part of: sequence
location: complement(153920..154231)
location: region:153920-154231:-1
so has part: feature:153920-154231:-1:exon
subclass of: SO_0000010

position:153920:-1
position: 153920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154231:-1
position: 154231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153920-154231:-1:exon

NAREPO1_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsJ
locus tag: NAREPO1_RS00880
old locus tag: NAREPO1_01770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000070912.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MNKNKIRIKLKSFNFKFINNSSKEIINTAKKTGANVIGPVFLPTRRERYTILTSPHVNKDARDQYEILTYKRLIDINNISNKTIDALMKLELNSGVSVQIILL
SIO_010081: NAREPO1_RS00880
subclass of: SO_0000673
so part of: NAREPO1_RS00880
location: complement(153920..154231)
location: region:153920-154231:-1
so has part: feature:153920-154231:-1:exon

WP_172597200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153920-154231:-1:exon

NAREPO1_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: fusA
locus tag: NAREPO1_RS00885
old locus tag: NAREPO1_01780
so part of: sequence
location: complement(154240..156339)
location: region:154240-156339:-1
so has part: feature:154240-156339:-1:exon
subclass of: SO_0000010

position:154240:-1
position: 154240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156339:-1
position: 156339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154240-156339:-1:exon

NAREPO1_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: fusA
locus tag: NAREPO1_RS00885
old locus tag: NAREPO1_01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069833.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MTNIKNYRNIGISAHIDAGKTTLTERILFYTGINRKIGEVHDGLATMDWMKQEQERGITITSATTTCFWSGIDNKYDQHRINIIDTPGHVDFTIEVERSMRILDGAIMVYCSVGGVQPQSETVWKQVNKYSIPRIAFINKMDRLGSNYFDIINQIKNKLNCNAVPLFLPIILKDTFLGLVDLIEMKSIYWNENNYGSEFFFDKIPDDMLNISNYWRNNLIEISVESSESLLNKYIDNNLSNKDIIFGLRKKTLDNSIMLITCGSAFKNKGVQPLLDMIIEYLPSPLDIPDIKCIEIGKENKKEIYINALNKNFSALVFKIYSDPCIGNLTFFRVYSGNIKSGNFVFNSNKNCKERLGRIVQMHANNKFEIKEVNSGDIAAVIGLKNVSTGDTLCDIKFNPIIFENIEFPNPVISIAVEPNTKLDQDKMSIAISKLLQEDPSFKSYVNNDTGQTIISGMGELHLEILTDRMKREFNIDFKMGKPEVSYRETIKKLVRKEGKYIRQTGGRGQFGHVFIQIEPCYDKNYIFVNNIIGGAIPKEYIPSIDKGIQEQMKIGILAGYPIVNIKVSCYDGSYHPVDSSEIAFKIAGSIAFKKAFLDADPVILEPIMKVEVITPIEYMGDIIGDLNKRRGIINNIKENFNNKIIISYVPLSEMFGYSTDLRSKTKGRANYSMEFLKYKESPKYILDKIINKKNINNK
SIO_010081: NAREPO1_RS00885
subclass of: SO_0000673
so part of: NAREPO1_RS00885
location: complement(154240..156339)
location: region:154240-156339:-1
so has part: feature:154240-156339:-1:exon

WP_130624132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154240-156339:-1:exon

NAREPO1_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsG
locus tag: NAREPO1_RS00890
old locus tag: NAREPO1_01790
so part of: sequence
location: complement(156353..156829)
location: region:156353-156829:-1
so has part: feature:156353-156829:-1:exon
subclass of: SO_0000010

position:156353:-1
position: 156353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156829:-1
position: 156829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156353-156829:-1:exon

NAREPO1_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsG
locus tag: NAREPO1_RS00890
old locus tag: NAREPO1_01790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344805.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MSRKNLSFNKKILPDYKFNSKIISKFINLLMLKGKKTLARYIVYKSLDIFFNKINNFDILNFEKNVIEKVKPIIEVKSRKIGGSKYSIPVEISINRANTLAIRWIINSARKRLENKFMFIKLSNEYIDILNNKGFSLKKRDEIHKIAESNKAFTHYKL
SIO_010081: NAREPO1_RS00890
subclass of: SO_0000673
so part of: NAREPO1_RS00890
location: complement(156353..156829)
location: region:156353-156829:-1
so has part: feature:156353-156829:-1:exon

WP_130624133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156353-156829:-1:exon

NAREPO1_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsL
locus tag: NAREPO1_RS00895
old locus tag: NAREPO1_01800
so part of: sequence
location: complement(156847..157215)
location: region:156847-157215:-1
so has part: feature:156847-157215:-1:exon
subclass of: SO_0000010

position:156847:-1
position: 156847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157215:-1
position: 157215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156847-157215:-1:exon

NAREPO1_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsL
locus tag: NAREPO1_RS00895
old locus tag: NAREPO1_01800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672719.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MTTINQLIKNSRKKKKYKSNTLALNKCPQKRGICIKVYTITPKKPNSALRKVCRVRLTNNYEITAYISGEGHNLQEHSSVLVRGGRVKDLPGVRYHVIRGILDCNGVKDRKKSRSKYGTKKI
SIO_010081: NAREPO1_RS00895
subclass of: SO_0000673
so part of: NAREPO1_RS00895
location: complement(156847..157215)
location: region:156847-157215:-1
so has part: feature:156847-157215:-1:exon

WP_130624134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156847-157215:-1:exon

NAREPO1_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpoC
locus tag: NAREPO1_RS00900
old locus tag: NAREPO1_01810
so part of: sequence
location: complement(157315..161340)
location: region:157315-161340:-1
so has part: feature:157315-161340:-1:exon
subclass of: SO_0000010

position:157315:-1
position: 157315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161340:-1
position: 161340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157315-161340:-1:exon

NAREPO1_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpoC
locus tag: NAREPO1_RS00900
old locus tag: NAREPO1_01810
EC number: 2.7.7.6
inference: COORDINATES: protein motif:HMM:TIGR02386.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MNNLYKKFNSIKLSIASPDIIRSWSYGEVKKPETINYRTFKPERDGLFCSKIFGPIKDYECLCGKYKKVKFKGIKCEKCGVEIIESKVRRIRMGHIELSSPVAHIWFLRSLPSKIGLLLDMSIKDIEKVLYFESYIITKSNNNKFPIGKIISEKEFLDINNFDFEVKMGAEAIQILLKNINLQQELIKLNKILSYTQSDFKNKRILKRIDLIKSFINSNNKPDWMILNVLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRKLINLSAPDIIIKNEKRMLQESVDSLLDNSRQDKTISSKRHLKSLSDMIKGKHGRFRQNLLGKRVDYSGRSVITVGPYLKLNQCGIPKEMALELFKPFIYNKLIENGISNNLKSSKKIVDSKDSIVWDVLLEIIKDYPILLNRAPTLHRLGIQSFYPILIEGKSIQLHPLVCTAYNADFDGDQMAIHIPISIESKIESKILMMSTNNILSPSNGDPVIIPSQDIIIGIYYLTVNIDENIKYNSIFSNLNEVKKYYDMNIISIHTNIKVRILEIINNEEIYNIVSTTVGRILLWDFFPKKLRFNLINKCLRKKDILNLINISYKLLGIKDTIKLIDNLMYIGFIYASKSGISVSLDDLVIPDKKFNIINKADIEVENIQNQYKSGLLSNEERYNKIINIWLNVSEEITTEMINNLSKYKNSSNYKELLNSIFIMYDSGARGSSTQIRQLSGIRGLMTKPDGSIIENPIKSNFKEGLDVFQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVITKYNCNTKEGIYIYDILENEKIKEEIYNKIFGRFIINDICINNKIIIRDNTIIDSNICNIIEFNLINKLKIRSVIMCDNEFGICSVCYGIDLSNGNIVSQGESVGVIAAQSIGEPGTQLTMRTFHIGGAAFSNSIIDSNIYSKYSGILDFNNLKYVKNKFDQFVVISKNSEIKIFNNNELQGKYKIPYGSIIYKMNNDFVKSGDLLIKYDPYYIPIISNIDGRVKFKDIIVDKTVINKLDEITGIDFIMIIDYHDRLIENRNFLPTIEIINSNNESYQFIIPDKSIIQVHDNEYINCGDIIAKIPQNKGSIKEDITGGLPRISDLFEVRNPKNQAILAEENGIIFINNLPKGKRKIIIKSIDNNKILYETIIPKWKNLQVLNESLVEKGDIISDGQASLNDILRLRGLNKLINFMIDEIQSIYKLQGVKINDKHIEIIIKQMLKKVLIIDPGESFLNKNDSIEFIKVKKINYDLNKKNKKNIKYQHILLGITKSSLITDSFISSASFQETTRVLTESSILGKIDFLKGLKENVIVGRLIPAGTGYIDYQKKMNFEK
SIO_010081: NAREPO1_RS00900
subclass of: SO_0000673
so part of: NAREPO1_RS00900
location: complement(157315..161340)
location: region:157315-161340:-1
so has part: feature:157315-161340:-1:exon

WP_130624135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157315-161340:-1:exon

NAREPO1_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpoB
locus tag: NAREPO1_RS00905
old locus tag: NAREPO1_01820
so part of: sequence
location: complement(161348..165337)
location: region:161348-165337:-1
so has part: feature:161348-165337:-1:exon
subclass of: SO_0000010

position:161348:-1
position: 161348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165337:-1
position: 165337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161348-165337:-1:exon

NAREPO1_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpoB
locus tag: NAREPO1_RS00905
old locus tag: NAREPO1_01820
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013877755.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MNILKKNFRKSFNKYNSIIELPNLLDIQKESFSKFIEFGINNILNSIFPIFNYNNNIELRYINYNIEKNVNVDSDECKLKGLTYSICLKIILELIIYNKNNEIINKIEQEVYIGDIPNMTKNGSFIINGVEKVIVSQLHRSPGVFFDIVKEKNIQLKNLYNARIIPYRGSWIDFEFDIKDCIFARIDRKKKFPVTMFLHCINYSNKDIINLFYKILEIDIIDNKFYINIDFLLNKKSNFNIYIENVLEINKSEIFTLEIILNLKSKNISFLEIEDNEIINSIIFDDCFDNSKNIFLKSFSKISKDLVNKILKFCNKLFIIDILNSSYGLSIFNTLKKDYTIDYKDSINEIQKYIRPGEFSSFESSEYLFKSLFFKKNKYDLSNVGRLKINQSINNYDSNENILNNNDIILILKKLINIKNGIYKIDDIDNLENRRIKLVGEMIENQFRIGLLRIEKNVKDKLSVVNDLCNITPQKIISSKQLSATIKEFFNSSQLSQFMDQNNPLSEITHKRRISSLGPGGLTRERAGFEVRDVHYTYYGKLCPIETPEGPNIGLINSLSIYSRVNKYGFLETPYRVVNNGIVTNKVKYLSSNEEFNNIIVQANYNLDKNNKFKDIKLICRYNGEFNLFNSNDINYMDISNQQIVSVGSSLIPFLEHNDANRALMGANMQRQAVPLMISESPLVGTGMEIIVSKDTNYTIYAKRGGIVSYLDSDCIIIEVNNEEVNESNPLYIDIYRLKKFNKSNQNTCINYIPIVNINDKINKNDIISDSQSTNFGELSLGKNIRVAFMSWYGYNFEDSMIISEKLVRDNIFTSIHIQEFSCICRETKLGKEEITADIPNISDSLLSKLDECGIIYKGSYVSPGDILVGKVTPKNETQLTPEEKLLRAIFGEKASDIKDTSLRVPNGIFGTVIDVQIFIKDGIKKDKRYIDIENDKLNKFKKFIDDEKNILSNILINNIKNLCIKNNINYDYNNLKNKQFEYLLKDNKITNDLKKIIKYLESIDSIYDNKYALFKNKIIQYDDLSNDILKIVKIYIATKKYIQIGDKMAGRHGNKGVISKINSIEDMPFDEYGNTIDIILNPLGVPSRMNIGQILEAHLGSSLKNIGKNIQYLYDKYNDIERIRKYLSKIYNFDKKDNIIDFNKFTNSEIYIIYNNIKNGLKISTPVFDGINEYEIKKMLNLSNLPDSGQIDLFDGFTGDKFDRKVTVGYIYMMKLNHLVDDKMHARSTGSYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLKEMLTVKSDDVDGRSNMYKNIIYGNNNIESNIPESFNVLFNEIKSLAINIELNEKTKNNE
SIO_010081: NAREPO1_RS00905
subclass of: SO_0000673
so part of: NAREPO1_RS00905
location: complement(161348..165337)
location: region:161348-165337:-1
so has part: feature:161348-165337:-1:exon

WP_130624136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161348-165337:-1:exon

NAREPO1_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplL
locus tag: NAREPO1_RS00910
old locus tag: NAREPO1_01830
so part of: sequence
location: complement(165424..165783)
location: region:165424-165783:-1
so has part: feature:165424-165783:-1:exon
subclass of: SO_0000010

position:165424:-1
position: 165424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165783:-1
position: 165783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165424-165783:-1:exon

NAREPO1_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplL
locus tag: NAREPO1_RS00910
old locus tag: NAREPO1_01830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014246113.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MISKEDIVETISNMSVLEVSELILMIEKKFSIKYSDIILNNNKKENIEEKKIFNLTLKSVGSNKISVVKLVRSITNLGLKESKDLVESCPVIIKENIDKEEFIKIKKMFEDIGSIVDLN
SIO_010081: NAREPO1_RS00910
subclass of: SO_0000673
so part of: NAREPO1_RS00910
location: complement(165424..165783)
location: region:165424-165783:-1
so has part: feature:165424-165783:-1:exon

WP_130624137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165424-165783:-1:exon

NAREPO1_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplJ
locus tag: NAREPO1_RS00915
old locus tag: NAREPO1_01840
so part of: sequence
location: complement(165813..166307)
location: region:165813-166307:-1
so has part: feature:165813-166307:-1:exon
subclass of: SO_0000010

position:165813:-1
position: 165813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166307:-1
position: 166307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165813-166307:-1:exon

NAREPO1_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplJ
locus tag: NAREPO1_RS00915
old locus tag: NAREPO1_01840
inference: COORDINATES: protein motif:HMM:NF012679.2
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MNNKNFIIKKNIIDKFDILFTKFKIFFFININNMPSRDINIFRKNLKKNNSVSFFIKKTLLNNYFKKNKLNNLINLNIFEQNLIIFSNEDVLNIVKFLVNFINIINISKISYLYYNKNIYDTNYIKYLYNIPTYEKSIFNLVIILKYLSIGKFLNLLHIINKKH
SIO_010081: NAREPO1_RS00915
subclass of: SO_0000673
so part of: NAREPO1_RS00915
location: complement(165813..166307)
location: region:165813-166307:-1
so has part: feature:165813-166307:-1:exon

WP_130624138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165813-166307:-1:exon

NAREPO1_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00920
old locus tag: NAREPO1_01850
so part of: sequence
location: complement(166326..167012)
location: region:166326-167012:-1
so has part: feature:166326-167012:-1:exon
subclass of: SO_0000010

position:166326:-1
position: 166326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167012:-1
position: 167012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166326-167012:-1:exon

NAREPO1_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00920
old locus tag: NAREPO1_01850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNNKNEYIKIIKNINKEKIYNLNDSINILKSISYRNFIENIEIVIVFNLKLLKINFNNLYGNCLLPYSNGIFPKIYIISLYEDKNNIEKLGFNFININDNNIKKLNFKFSNLFFIKNNIYINNKNNNFIKNLIKYMIFDKKYGNLINNYDFIEDNIKNGKKIFYRCKNGILNLVIGKINYKNEYLVDNIISFYKHLLNNKIIINNKKNIFKKIYITSTMGISLKINI
SIO_010081: NAREPO1_RS00920
subclass of: SO_0000673
so part of: NAREPO1_RS00920
location: complement(166326..167012)
location: region:166326-167012:-1
so has part: feature:166326-167012:-1:exon

WP_130624139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166326-167012:-1:exon

NAREPO1_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rplK
locus tag: NAREPO1_RS00925
old locus tag: NAREPO1_01860
so part of: sequence
location: complement(167031..167450)
location: region:167031-167450:-1
so has part: feature:167031-167450:-1:exon
subclass of: SO_0000010

position:167031:-1
position: 167031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167450:-1
position: 167450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167031-167450:-1:exon

NAREPO1_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rplK
locus tag: NAREPO1_RS00925
old locus tag: NAREPO1_01860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013877759.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MKKIISYLKLQIYAKKATPNPPIGSILGQKGINIISFCNKFNDRTKDFSDILVSVFITIYDDKSFDFIIKTTPTSILLKKELNINKGSSNCKNKIIGSISKSKIEEISKIKFNDMLNDDINIISKSIIGTAKSMGIEII
SIO_010081: NAREPO1_RS00925
subclass of: SO_0000673
so part of: NAREPO1_RS00925
location: complement(167031..167450)
location: region:167031-167450:-1
so has part: feature:167031-167450:-1:exon

WP_130624140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167031-167450:-1:exon

NAREPO1_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: nusG
locus tag: NAREPO1_RS00930
old locus tag: NAREPO1_01870
so part of: sequence
location: complement(167483..168025)
location: region:167483-168025:-1
so has part: feature:167483-168025:-1:exon
subclass of: SO_0000010

position:167483:-1
position: 167483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168025:-1
position: 168025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167483-168025:-1:exon

NAREPO1_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: nusG
locus tag: NAREPO1_RS00930
old locus tag: NAREPO1_01870
inference: COORDINATES: protein motif:HMM:TIGR00922.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MENINNKWYVLKVLSGSEDKVLKYIKYYSNYFNVDKYFKQIIIPKEEIIEIKNGKKIKSKRKFLPGYILLNMEVNDKTINMINKIKNVFGFIKSGSHLSYIPDDKINNILEKIKISCENPKPKILFNIGEIIRIKDGPFVDFNGKVENIDYSKNRITVYVSIFGRNTPVNLNFSQIEKII
SIO_010081: NAREPO1_RS00930
subclass of: SO_0000673
so part of: NAREPO1_RS00930
location: complement(167483..168025)
location: region:167483-168025:-1
so has part: feature:167483-168025:-1:exon

WP_172597198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167483-168025:-1:exon

NAREPO1_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: tuf
locus tag: NAREPO1_RS00940
old locus tag: NAREPO1_01880
so part of: sequence
location: complement(168263..169447)
location: region:168263-169447:-1
so has part: feature:168263-169447:-1:exon
subclass of: SO_0000010

position:168263:-1
position: 168263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169447:-1
position: 169447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168263-169447:-1:exon

NAREPO1_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: tuf
locus tag: NAREPO1_RS00940
old locus tag: NAREPO1_01880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874477.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFNRTKTHINVGTIGHVDHGKTTLTSAITIVLSKKFGGNIYNFDQIDNAPEEKKRGITINTSHVEYDTKLRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSANDGPMPQTREHILLARQVGVPKIIVFINKCDLVEDNEILELIEMEIRDLLSKYGFSGEETPIIKGSALKAIEGDVKWENSIIDLSETLDKYIPDPKRDIDKPFLLPIEDVFSIPGRGTVVTGRIEKGIIKIGDEVEIVGIKDTIKTICTGIEMFRKILDEGRAGENVGILLRGVKRDDVERGQVLSKPGSIKPYTKFKSEVYILTKDEGGRHTPFFNGYKPQFYFRTTDVTGIIELPDNVDMVIPGDNINIVSELISPIAMENGLRFAIREGGKTVGAGLVTEIIL
SIO_010081: NAREPO1_RS00940
subclass of: SO_0000673
so part of: NAREPO1_RS00940
location: complement(168263..169447)
location: region:168263-169447:-1
so has part: feature:168263-169447:-1:exon

WP_130624143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168263-169447:-1:exon

NAREPO1_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00945
old locus tag: NAREPO1_01890
so part of: sequence
location: complement(169497..169568)
location: region:169497-169568:-1
so has part: feature:169497-169568:-1:exon
subclass of: SO_0000663

position:169497:-1
position: 169497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169568:-1
position: 169568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169497-169568:-1:exon

NAREPO1_RS00945
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00945
old locus tag: NAREPO1_01890
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169533..169535),aa:Gly,seq:tcc)
SIO_010081: NAREPO1_RS00945
subclass of: SO_0000673
so part of: NAREPO1_RS00945
location: complement(169497..169568)
location: region:169497-169568:-1
so has part: feature:169497-169568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169497-169568:-1:exon

NAREPO1_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00950
old locus tag: NAREPO1_01900
so part of: sequence
location: complement(169599..169682)
location: region:169599-169682:-1
so has part: feature:169599-169682:-1:exon
subclass of: SO_0000663

position:169599:-1
position: 169599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169682:-1
position: 169682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169599-169682:-1:exon

NAREPO1_RS00950
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00950
old locus tag: NAREPO1_01900
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169646..169648),aa:Tyr,seq:gta)
SIO_010081: NAREPO1_RS00950
subclass of: SO_0000673
so part of: NAREPO1_RS00950
location: complement(169599..169682)
location: region:169599-169682:-1
so has part: feature:169599-169682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169599-169682:-1:exon

NAREPO1_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00955
old locus tag: NAREPO1_01910
so part of: sequence
location: complement(169698..169770)
location: region:169698-169770:-1
so has part: feature:169698-169770:-1:exon
subclass of: SO_0000663

position:169698:-1
position: 169698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169770:-1
position: 169770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169698-169770:-1:exon

NAREPO1_RS00955
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00955
old locus tag: NAREPO1_01910
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169735..169737),aa:Thr,seq:tgt)
SIO_010081: NAREPO1_RS00955
subclass of: SO_0000673
so part of: NAREPO1_RS00955
location: complement(169698..169770)
location: region:169698-169770:-1
so has part: feature:169698-169770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169698-169770:-1:exon

NAREPO1_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00960
old locus tag: NAREPO1_01920
so part of: sequence
location: complement(169834..169908)
location: region:169834-169908:-1
so has part: feature:169834-169908:-1:exon
subclass of: SO_0000663

position:169834:-1
position: 169834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169908:-1
position: 169908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169834-169908:-1:exon

NAREPO1_RS00960
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00960
old locus tag: NAREPO1_01920
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169871..169873),aa:Arg,seq:acg)
SIO_010081: NAREPO1_RS00960
subclass of: SO_0000673
so part of: NAREPO1_RS00960
location: complement(169834..169908)
location: region:169834-169908:-1
so has part: feature:169834-169908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169834-169908:-1:exon

NAREPO1_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00965
old locus tag: NAREPO1_01930
so part of: sequence
location: complement(169918..170006)
location: region:169918-170006:-1
so has part: feature:169918-170006:-1:exon
subclass of: SO_0000663

position:169918:-1
position: 169918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170006:-1
position: 170006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169918-170006:-1:exon

NAREPO1_RS00965
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS00965
old locus tag: NAREPO1_01930
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169970..169972),aa:Ser,seq:gct)
SIO_010081: NAREPO1_RS00965
subclass of: SO_0000673
so part of: NAREPO1_RS00965
location: complement(169918..170006)
location: region:169918-170006:-1
so has part: feature:169918-170006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169918-170006:-1:exon

NAREPO1_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: csrA
locus tag: NAREPO1_RS00970
old locus tag: NAREPO1_01940
so part of: sequence
location: complement(170025..170198)
location: region:170025-170198:-1
so has part: feature:170025-170198:-1:exon
subclass of: SO_0000010

position:170025:-1
position: 170025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170198:-1
position: 170198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170025-170198:-1:exon

NAREPO1_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: csrA
locus tag: NAREPO1_RS00970
old locus tag: NAREPO1_01940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013746356.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLILTRKCGEKLIINNDIIITILNIKVKDSQIKIGIDAPKLIKIYREEIFNKIKKNI
SIO_010081: NAREPO1_RS00970
subclass of: SO_0000673
so part of: NAREPO1_RS00970
location: complement(170025..170198)
location: region:170025-170198:-1
so has part: feature:170025-170198:-1:exon

WP_130624144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170025-170198:-1:exon

NAREPO1_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00975
old locus tag: NAREPO1_01950
so part of: sequence
location: complement(170226..171548)
location: region:170226-171548:-1
so has part: feature:170226-171548:-1:exon
subclass of: SO_0000010

position:170226:-1
position: 170226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171548:-1
position: 171548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170226-171548:-1:exon

NAREPO1_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00975
old locus tag: NAREPO1_01950
inference: COORDINATES: protein motif:HMM:NF013570.2
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase-related protein
translation: MNYIKSLDEIRNIFINFFKFNNHILINGSSIIPYNDNSILFTNSGISQFKKKLLGNKKFQNKNVITIQKCLRVGGKHNDLDQIGYSNYHHTFFEMLGNFSFNGYFKKESICLIFELITGSKWFNISRNNLIITVHNIDDESYKIWLSLGINKNNIFKIGSSKNISYSDNFWKMSNYGLCGTSTEILYINDYNLKKSKNLIKDSLEICNIVFIQFNLLRNDKLINLPYKSIDTGIGLERISSVIQQVDSSYKIDVFNKIINEILNLNLFVNINNNYISLKVISDHIRSIIFIINENIYPSNEGRGYILRKIIRRAICYGIFAGINEKFLYKLVEPVINIMFFYKKDFNNIDNIKNIILIEESKFLNILKNGIKILNNKIKKNDNIFLNGDFIFKLHDTYGLPIFFIEKYLKYKNIKFDKKKFIILMKLQRKNSSINNKKFL
SIO_010081: NAREPO1_RS00975
subclass of: SO_0000673
so part of: NAREPO1_RS00975
location: complement(170226..171548)
location: region:170226-171548:-1
so has part: feature:170226-171548:-1:exon

WP_130624145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170226-171548:-1:exon

NAREPO1_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: recA
locus tag: NAREPO1_RS00980
old locus tag: NAREPO1_01960
pseudo: true
so part of: sequence
location: complement(<171612..172571)
location: region:171612-172571:-1
so has part: feature:171612-172571:-1:exon
subclass of: SO_0000010

position:171612:-1
position: 171612
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:172571:-1
position: 172571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171612-172571:-1:exon

NAREPO1_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: recA
locus tag: NAREPO1_RS00980
old locus tag: NAREPO1_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004387897.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase RecA
SIO_010081: NAREPO1_RS00980
subclass of: SO_0000673
so part of: NAREPO1_RS00980
location: complement(<171612..172571)
location: region:171612-172571:-1
so has part: feature:171612-172571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171612-172571:-1:exon

NAREPO1_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00985
old locus tag: NAREPO1_01970
so part of: sequence
location: complement(172675..173676)
location: region:172675-173676:-1
so has part: feature:172675-173676:-1:exon
subclass of: SO_0000010

position:172675:-1
position: 172675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173676:-1
position: 173676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172675-173676:-1:exon

NAREPO1_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00985
old locus tag: NAREPO1_01970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLYLIVPTKNFFSFFITFIKNLDNLKYKKFNLIDINFKKKNNSIKYIKKKNSLNIKYLNLNNNLNFINFNLLNKKTENIISNFKKNNNNIILVNGIPLNFDKYNLNISSLFINLELIKRNNFNIIIELYIIHNNYFLKFKKIIKDLFFIFNKYIFISIKNIIIINFSKNCILKNNKYTSFFKKYNLNVLSVINVNYFKINISYFNFINITKSMILNKIKNNFMIEKILFFSENIFIYKNNIYKKNYLLVELISNINDINLFFNKLEYNKCTLLIINDFFSLKHNLKLNNIIKFLLNKKFLFSILISNYDLSYIINLLKIYKIDKLDIDSIS
SIO_010081: NAREPO1_RS00985
subclass of: SO_0000673
so part of: NAREPO1_RS00985
location: complement(172675..173676)
location: region:172675-173676:-1
so has part: feature:172675-173676:-1:exon

WP_130624147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172675-173676:-1:exon

NAREPO1_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS00990
old locus tag: NAREPO1_01980
so part of: sequence
location: complement(173700..174797)
location: region:173700-174797:-1
so has part: feature:173700-174797:-1:exon
subclass of: SO_0000010

position:173700:-1
position: 173700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174797:-1
position: 174797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173700-174797:-1:exon

NAREPO1_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS00990
old locus tag: NAREPO1_01980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MSKLDYYKILGIDKNSTDKEIKTAYKKLAIKFHPDKNLGDKNCELKFKEIKEAYETLIDHKKRNLYDKYGHSAFEENQESYDQNFSYNFNSGFGDIFGDIFGDFFNNKNKNNKKKENIFYSLEITFEESIKGVEKSIKVLINDTCFVCNGKGSKDGSFPITCPTCKGSGKMQIKQGFFIIQQICSNCNGNKKIIKNPCKKCNGSGECEVEKILNIKIPSGINNGDQINLSKFNLDNIYIKIFVKNHSIFKREKDDLYCDVPINFSIASLGGEICIPTFDGKIKIKIPKETQSGKLLKIKGKGVYNHRNYNQGDLICKIIVETPINLNDYQKKLIYEFGKSLSDSQNISSNNYKFKSFIDSIKKFF
SIO_010081: NAREPO1_RS00990
subclass of: SO_0000673
so part of: NAREPO1_RS00990
location: complement(173700..174797)
location: region:173700-174797:-1
so has part: feature:173700-174797:-1:exon

WP_130624148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173700-174797:-1:exon

NAREPO1_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaK
locus tag: NAREPO1_RS00995
old locus tag: NAREPO1_01990
so part of: sequence
location: complement(174821..176746)
location: region:174821-176746:-1
so has part: feature:174821-176746:-1:exon
subclass of: SO_0000010

position:174821:-1
position: 174821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176746:-1
position: 176746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174821-176746:-1:exon

NAREPO1_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaK
locus tag: NAREPO1_RS00995
old locus tag: NAREPO1_01990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087439.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MNKIIGIDLGTTNSCVSIIENSKPKVIENNEGNRTTPSIVAYMDNGEILVGQPAKRQSVTNPKNTLFAIKRLIGRKFNDEEIKKDINIMPYKIVSSDNGDAWIEINNKKIAPQQISAEILKKMKKTAEDYLGEIVNQAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKTGNSIIAVYDLGGGTFDISIIEIDEVDGEKTFEVLSTNGDTHLGGEDFDNVIINYLVNEFKKDYGIDLKSDPLAMQRLKDASEKAKIELSSSKQTEINLPYITSDSSGPKHMVYKITKSKLESLVESLIDKTMNPVKLAIKDSNLSIENINEIVLVGGQTRMPLVQEKVSKFFNKEVKKDINPDEAVAIGAAIQGGVLSGDVKDLLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRSIDNKSLGQFNLDGILPAMRGIPQIEVTFDINSDGILHVSAKDKNSGKEQKITIQSSSGLNEQEIKKMIKEAEENEELDKKFEELTQIKNQGDQILHSTKKQLSEVKDKMSSEDIENIEKSILDLENSMKNDDKSEIEKNIRLVINLSSKMINLSQDLNKSDDINSNNFNNDNNKNIKENSNTADDIDFEEVKK
SIO_010081: NAREPO1_RS00995
subclass of: SO_0000673
so part of: NAREPO1_RS00995
location: complement(174821..176746)
location: region:174821-176746:-1
so has part: feature:174821-176746:-1:exon

WP_130624149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174821-176746:-1:exon

NAREPO1_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01000
old locus tag: NAREPO1_02000
so part of: sequence
location: complement(177043..179289)
location: region:177043-179289:-1
so has part: feature:177043-179289:-1:exon
subclass of: SO_0000010

position:177043:-1
position: 177043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179289:-1
position: 179289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177043-179289:-1:exon

NAREPO1_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01000
old locus tag: NAREPO1_02000
inference: COORDINATES: protein motif:HMM:NF013100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MKNKVTKIIVLILFLLTIPLVYIYILSNFIKNNFYNFNENSPTIFSKIIDIDINNNFNINKFLKILELSRYKESDKLYESGNYILEKNRIFIFRRSFYSFDNYIKKAKFLINFNNNKILNIINLDINKEIKNFQIEPQIIYFSNLNNNFYLYKFITDFPDSLIKIILLVEDENFFFHKGININSILRSVIKNIKNRKIVQGGSTITQQLVKNIFFNYYNKNFIRKFNEILISLIIENKYKKDYILEFYLNKIFFGNINNNNIYGFPLASLFYFGKNIDELDLNEQVILVSMIKGPSLYNPYKNKKIIIDRRNFIFKKMKDKNLIDNYLFDKLISKDIILNNYNIYINYSYLDIIKNEIKKLNKNFYDFKYIFSNFDLLSQNSSKISCKKILSNLREKTKIKDLEISMLITDFKNGNIKCSIGSFDNKFGYNRIYINRNIGSIIKPIIYLLSLIKKKYKLNSLIDNKNVIYNDGKKIWIPKNLNNNFKEKVIFIDSLIHSLNIPVINIGFSVGIDNIINFIKLILNDYNIDIKKYPSIFLGSIGLNLINISQIYQSIFNYGNIVELNSISFLIDKKDIKYNFQNQIRKENNIFSEEHSYLIMYCMKKIIEEGTAKNLNKNKDLVLLGKTGTTNNFVDSWFIGSDNNEMCIIWIGRDNNCTTYLSGSSGSMKIYEEYIKYSFPESFYFKELKNIYYVNIDEYGNIICSEHNKKIIPIIIDNEEALNNNFLCPHHNIIVKYFNKIFNIKKK
SIO_010081: NAREPO1_RS01000
subclass of: SO_0000673
so part of: NAREPO1_RS01000
location: complement(177043..179289)
location: region:177043-179289:-1
so has part: feature:177043-179289:-1:exon

WP_172597199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177043-179289:-1:exon

NAREPO1_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: tyrS
locus tag: NAREPO1_RS01005
old locus tag: NAREPO1_02010
so part of: sequence
location: 179383..180639
location: region:179383-180639:1
so has part: feature:179383-180639:1:exon
subclass of: SO_0000010

position:179383:1
position: 179383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180639:1
position: 180639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179383-180639:1:exon

NAREPO1_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: tyrS
locus tag: NAREPO1_RS01005
old locus tag: NAREPO1_02010
EC number: 6.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00234.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MDNIIKKLNKRDLIFQITKKEYLLKNFNNLNINLYCGFDPTCDSLHIGHLLLIKYIIFFLKKKYNVIIVIGSSTSLIGDPSFKKNINFINNKYLIKKWAYSIKNQIYKLINLEKKKILILDNKKWFNSINLVDFLNNIGNKFKINYLLNKQSIKNRLKNNNLSFREFSYSIIQSYDFLYLYDKYKINLQIGGSDQWGNITSGIQLIKKIRKKNVYGITFPILTKLNGHKFSKSDSNNIWLDKTKTSSYNFYQFFININDKEVKNYLKYFTNIKIEDIHNICNSNKKNIIAGKKIIANELTKMVHGKTELNIINKITDKIFNTNNLLTEDDLNYLYINNFNLIILNNYIKLRDFLIKCNISKSNTESNILINQGSIKINGKINNNIKYIFSKNDILFNKYTFIKKGKKNFYLIKWLTII
SIO_010081: NAREPO1_RS01005
subclass of: SO_0000673
so part of: NAREPO1_RS01005
location: 179383..180639
location: region:179383-180639:1
so has part: feature:179383-180639:1:exon

WP_130624151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179383-180639:1:exon

NAREPO1_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01010
old locus tag: NAREPO1_02020
so part of: sequence
location: 180657..180938
location: region:180657-180938:1
so has part: feature:180657-180938:1:exon
subclass of: SO_0000010

position:180657:1
position: 180657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180938:1
position: 180938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180657-180938:1:exon

NAREPO1_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01010
old locus tag: NAREPO1_02020
inference: COORDINATES: protein motif:HMM:NF013545.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25
translation: MKIIEAYIKEEKNNNLLRKLGFIPAVIYKKNFKNILIKIKENNLYFIINSKIELFNNNFIIKIYENNLLEVYIKKIQYHPFKNKIIHIDFIKK
SIO_010081: NAREPO1_RS01010
subclass of: SO_0000673
so part of: NAREPO1_RS01010
location: 180657..180938
location: region:180657-180938:1
so has part: feature:180657-180938:1:exon

WP_130624152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180657-180938:1:exon

NAREPO1_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01015
old locus tag: NAREPO1_02030
so part of: sequence
location: complement(180943..181800)
location: region:180943-181800:-1
so has part: feature:180943-181800:-1:exon
subclass of: SO_0000010

position:180943:-1
position: 180943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181800:-1
position: 181800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180943-181800:-1:exon

NAREPO1_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01015
old locus tag: NAREPO1_02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
translation: MITKILNGKYISNILNKNIKNKYIKILNSRKYLGIPSIAIIYVGDNISSNIYIKNKIKKIEYIGYRVYIYKFDYNVKECIIIRLINLLNINNNIHGILVQFPLPSNINSLNIVSNINCNKDIDCLNPYNFGKLCYKKSYFRPCTAYGIIILLQKYNILNNKSYAVVIGISNVIGKPICIELLNYGYTVTLVNKNCIYIKEIIEQADLLIIAVGIPNFINNKFNIKKGSIIIDVGINILNNKIVGDVNMNSVVNKASYITPVPGGIGPVTISILLNNILNSFIINS
SIO_010081: NAREPO1_RS01015
subclass of: SO_0000673
so part of: NAREPO1_RS01015
location: complement(180943..181800)
location: region:180943-181800:-1
so has part: feature:180943-181800:-1:exon

WP_130624153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180943-181800:-1:exon

NAREPO1_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01020
old locus tag: NAREPO1_02040
so part of: sequence
location: 181851..181925
location: region:181851-181925:1
so has part: feature:181851-181925:1:exon
subclass of: SO_0000663

position:181851:1
position: 181851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181925:1
position: 181925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181851-181925:1:exon

NAREPO1_RS01020
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS01020
old locus tag: NAREPO1_02040
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:181886..181888,aa:Arg,seq:tct)
SIO_010081: NAREPO1_RS01020
subclass of: SO_0000673
so part of: NAREPO1_RS01020
location: 181851..181925
location: region:181851-181925:1
so has part: feature:181851-181925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181851-181925:1:exon

NAREPO1_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aroQ
locus tag: NAREPO1_RS01025
old locus tag: NAREPO1_02050
so part of: sequence
location: 182045..182494
location: region:182045-182494:1
so has part: feature:182045-182494:1:exon
subclass of: SO_0000010

position:182045:1
position: 182045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182494:1
position: 182494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182045-182494:1:exon

NAREPO1_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aroQ
locus tag: NAREPO1_RS01025
old locus tag: NAREPO1_02050
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353932.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MNFNIFLINGPNLGLLGSRENEIYGNKSLNILIKELEDFSKKLNINLIHFQSNSESKIINFIHKFKINNINFIIINAGAYSHTSIAIRDALKLTNLPIIEVHISNIYSRETFRRFSYISDISLGVICGFGTKGYFYSLEFANIYLNKLL
SIO_010081: NAREPO1_RS01025
subclass of: SO_0000673
so part of: NAREPO1_RS01025
location: 182045..182494
location: region:182045-182494:1
so has part: feature:182045-182494:1:exon

WP_130624154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182045-182494:1:exon

NAREPO1_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01030
old locus tag: NAREPO1_02060
so part of: sequence
location: 182519..183577
location: region:182519-183577:1
so has part: feature:182519-183577:1:exon
subclass of: SO_0000010

position:182519:1
position: 182519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183577:1
position: 183577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182519-183577:1:exon

NAREPO1_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01030
old locus tag: NAREPO1_02060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014657562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MFSFLKKINGMFSNDLSIDLGTANTLIYVKGKGIVLNEPSVVSIIKDKNGVPNKVAAVGNMAKKMLGRTPENILTVKPLKDGVIADFSVTEKMLEFFINKIHKNKIIRPSPRILICTPSGATKVEKKAIKESAYSAGARDVFVMEEPMAAAIGANLPVSEPTGSMIIDIGGGTTEVAIISLNGIVYSSSIRIGGHKFDEYIIHYVRRNYGSLIGEVTAEKIKYNIGTAFKDEKILEYKVIGRNLSEGIPKSFILNSNQILESLQEPLSNIISSIMVALEQCPPELSSDISEKGMILTGGGSLLRNIDKLIEYHTGISVTIADDPLTCVVKGGGKALDLIDECDNINIFNNYY
SIO_010081: NAREPO1_RS01030
subclass of: SO_0000673
so part of: NAREPO1_RS01030
location: 182519..183577
location: region:182519-183577:1
so has part: feature:182519-183577:1:exon

WP_130624155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182519-183577:1:exon

NAREPO1_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01035
old locus tag: NAREPO1_02070
so part of: sequence
location: 183602..184366
location: region:183602-184366:1
so has part: feature:183602-184366:1:exon
subclass of: SO_0000010

position:183602:1
position: 183602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184366:1
position: 184366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183602-184366:1:exon

NAREPO1_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01035
old locus tag: NAREPO1_02070
inference: COORDINATES: protein motif:HMM:NF016011.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MKIKTVKKIIFITFILIFLYKFKFCNNFLNKMISYNYYNYIYNKNSLIKNYIKLFKNNSKLLSEIDLLKNELNDEKFKNLILKRNINNNKNILKKINFNIIKACVINRNIINNVYTINKGLNHNIKVGQVVLDKNGVIGQIINVYKDKSNFLSICSKKILIPSFIKRSNFKCILKGCGYKNELYFYHIDNEMISEDDIKIGDIFLTSGLDNKFIKNIPVAIVKYVKIKNFRINKIYIKPLFYAFLIKNVFIINK
SIO_010081: NAREPO1_RS01035
subclass of: SO_0000673
so part of: NAREPO1_RS01035
location: 183602..184366
location: region:183602-184366:1
so has part: feature:183602-184366:1:exon

WP_130624156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183602-184366:1:exon

NAREPO1_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ssb
locus tag: NAREPO1_RS01040
old locus tag: NAREPO1_02080
so part of: sequence
location: complement(184406..184897)
location: region:184406-184897:-1
so has part: feature:184406-184897:-1:exon
subclass of: SO_0000010

position:184406:-1
position: 184406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184897:-1
position: 184897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184406-184897:-1:exon

NAREPO1_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ssb
locus tag: NAREPO1_RS01040
old locus tag: NAREPO1_02080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354037.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSNKSINKVILIGYLGQDPDSKYTNNGNMVTTINLATSNKWKDKKSGEIKNKTEWHRIVFFGKIAEICSEYLKKGSYIYVEGQLQTRKWKNQEGIDKYITEIIVSVNGIMKILNNIKQNWNESSFIKNNSEIKNNIDEDDDNEENDDDDFNIKDNFEDDDISF
SIO_010081: NAREPO1_RS01040
subclass of: SO_0000673
so part of: NAREPO1_RS01040
location: complement(184406..184897)
location: region:184406-184897:-1
so has part: feature:184406-184897:-1:exon

WP_130624157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184406-184897:-1:exon

NAREPO1_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: gyrA
locus tag: NAREPO1_RS01045
old locus tag: NAREPO1_02090
so part of: sequence
location: 185032..187548
location: region:185032-187548:1
so has part: feature:185032-187548:1:exon
subclass of: SO_0000010

position:185032:1
position: 185032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187548:1
position: 187548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185032-187548:1:exon

NAREPO1_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: gyrA
locus tag: NAREPO1_RS01045
old locus tag: NAREPO1_02090
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091303.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MENNKNNNNIISLEKEIKKSYLDYAMSVIISRALPDVRDGLKPVHRRILYAMSILKNDYNKDYKKSARIVGDVIGKYHPHGDNSVYDAIVRMAQFFSLRYPLIDGQGNFGSIDGDPAAAMRYTEIRMSKISHELLQDIDKNTVNFNMNYDNTEEIPEVLPTRIPNLLINGSYGIAVGVATNIPPHNINEIIDGCIAIIKNKNISVKDLIKYIPGPDFPTGGIICNKNDIENIYRTGKGKISIKSKIDIEINKNTGDKFIIIKEIPYQINKIKLIEKIIDCIKQKKIIGINNIIDESSQEGIRIVIDIKKDFSEENILNNLYINTQLQNNLYINMIALCNKKPKLMSLKDILLEFIKHRENIIYRKNLFLFNKYNKKINIIEGFIITIYNINNIIDIIKESNSLEETKNKLKNIEFKILENFKININKYYNIISKNIINNNIYKFNDEQIKSILDLKLYKLTKLENELLINEYNLLINNIKECISILNNKNSLENSIYKELLEIKNLYKDKRLTKIIDDKLYTENKNILTKEFKVIITISYYGYIKYQPLSHYNIQKRGGKGKSSTKIKSEDFIKSLLISDINKDILLFSNIGKMYKMKIFQLPESSKYSKGKPIYNLININKNERITSIISIDSEKINNNNYFLMSTSMGFVKKTLVKELIKSRNSGIIVIKLYKNDELIDINITNGNNDIMLFSENGKSVRFKENNVRLTKRNSYGIKGICLNKNDRIVSLIISENNNNQILTITKNGFGKRTEKIEFPVKSRATQGVISTKITNKTGKIIKSIEVNNNDQILIITDTGTIVRLKVNEIRISKRNTLGVKLIKISKTETVVDIKRFN
SIO_010081: NAREPO1_RS01045
subclass of: SO_0000673
so part of: NAREPO1_RS01045
location: 185032..187548
location: region:185032-187548:1
so has part: feature:185032-187548:1:exon

WP_130624158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185032-187548:1:exon

NAREPO1_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01050
old locus tag: NAREPO1_02100
so part of: sequence
location: 187635..188792
location: region:187635-188792:1
so has part: feature:187635-188792:1:exon
subclass of: SO_0000010

position:187635:1
position: 187635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188792:1
position: 188792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187635-188792:1:exon

NAREPO1_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01050
old locus tag: NAREPO1_02100
inference: COORDINATES: protein motif:HMM:NF012489.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MFNIFKLFIIIVLLLINISTSYSSEYYNSDIEQTYRILKRKIMKYDLSEDFGENTKMSAEIKIKSEINDSISLLNKLSNDMYCNNINDNNTFLISKLKNGYMEIIHDKYGRFSYGKNNGVMRDVFDVHNEIPFSNNEYNSFDNFMFNRSNNVVSYKNDNLFELVNGLSTNIQFQFKNDSTIHRRNRKIIKYSNGIGCGYSLTYNISDFTVSAAFTQSERNVDQMMIDIDQLKNKYASSYGVAFKYDNDNIYIASLYANSKFMMPYGNINNHYIRHYIFEEASILRKYYYCGFAPTVDTIEIMAKLKFIKNIYPYILYMNIFSKNIKNDLDQYLTKSLNFGIDYKINEDISIIANLCINFLKENSFTKNVEINVDNTFSLETIYKF
SIO_010081: NAREPO1_RS01050
subclass of: SO_0000673
so part of: NAREPO1_RS01050
location: 187635..188792
location: region:187635-188792:1
so has part: feature:187635-188792:1:exon

WP_130624159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187635-188792:1:exon

NAREPO1_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01055
old locus tag: NAREPO1_02110
so part of: sequence
location: 188797..189885
location: region:188797-189885:1
so has part: feature:188797-189885:1:exon
subclass of: SO_0000010

position:188797:1
position: 188797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189885:1
position: 189885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188797-189885:1:exon

NAREPO1_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01055
old locus tag: NAREPO1_02110
EC number: 6.3.2.4
inference: COORDINATES: protein motif:HMM:NF002528.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MISSNNRKILVACIYGGISLENEISIKSAINIINNIDLNKFNLILIGINKNGTFHLEDFDININYTFYNLKRILNKKSNILKIVYNKIPYITSNNFKNKKIIPDIFFPITHGIFGEDGNLQGILNSLKIPYIGSNLKSSCISSNKDIFKDVLKNNNFPIIPYFKIYKNDIINLSYKGIAKKINSKKFFVKPSNQGSSIGINLIKSEKDFNKEKILKIFNYSDILLIEPLIIGKEIECGIINYFGKIKVSNSFEIYRKNNFYSYKQKYFDNNIKIKEIKENSIINKKIKNLSYKIFNILECKSLARIDFIINKNNKIFINEINTIPGFTEKSLYIKMWNKYILNIKELISIIIYSSIKKIKNL
SIO_010081: NAREPO1_RS01055
subclass of: SO_0000673
so part of: NAREPO1_RS01055
location: 188797..189885
location: region:188797-189885:1
so has part: feature:188797-189885:1:exon

WP_130624160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188797-189885:1:exon

NAREPO1_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: glnS
locus tag: NAREPO1_RS01060
old locus tag: NAREPO1_02120
so part of: sequence
location: complement(189872..191473)
location: region:189872-191473:-1
so has part: feature:189872-191473:-1:exon
subclass of: SO_0000010

position:189872:-1
position: 189872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191473:-1
position: 191473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189872-191473:-1:exon

NAREPO1_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: glnS
locus tag: NAREPO1_RS01060
old locus tag: NAREPO1_02120
EC number: 6.1.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_044006058.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--tRNA ligase
translation: MDTKNFILNIIEKDIIKNNLTKINTRFAPDPNGYLHIGHVKSILINYLIAKKYNGNFNIRIDDTNPINRNDIYINEIINNIKWLGIKYNGIEKYTSNYFNEIFKFAIILIKKKLAYVDELPISIYKKYKGNYNNLGIDSPYRNRSVKENIDYFLKMKNGFYKENHACLRAKINMKSSNIIIRDPILYRIKYKKHFKTKYNWCIYPTYDFSHCICDFLEEITYSLCTLEFQNNKILYNWILDSLDIKNKPKQYEFSRLNIEYLTLSKRKLNILVEKNIVTGWDDPRMPTISGLKNRGYTSKSIIDFCNSLGITKKNSLVKIKNLEFFIKNDLNFKSIRIMSVINPIKLYIINLKKNFFIKTPLNPNNLKNGYKLINFCNELYVEKNDFINKENFNNLIGKIFKLRYSYILKIIDIEIKKDIINKIYCIYYKNTINNLYLKNNKVNKIIHWVSCKYNFISYYIFYDYIFKNINYLKNKNILDYINNNSIIIKKGFTEKSNYIYSKNIYYQFERIGYFNIKNINNNKIIFNNIINF
SIO_010081: NAREPO1_RS01060
subclass of: SO_0000673
so part of: NAREPO1_RS01060
location: complement(189872..191473)
location: region:189872-191473:-1
so has part: feature:189872-191473:-1:exon

WP_130624161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189872-191473:-1:exon

NAREPO1_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01065
old locus tag: NAREPO1_02130
so part of: sequence
location: 191555..191629
location: region:191555-191629:1
so has part: feature:191555-191629:1:exon
subclass of: SO_0000663

position:191555:1
position: 191555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191629:1
position: 191629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191555-191629:1:exon

NAREPO1_RS01065
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS01065
old locus tag: NAREPO1_02130
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:191590..191592,aa:Met,seq:cat)
SIO_010081: NAREPO1_RS01065
subclass of: SO_0000673
so part of: NAREPO1_RS01065
location: 191555..191629
location: region:191555-191629:1
so has part: feature:191555-191629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191555-191629:1:exon

NAREPO1_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01070
old locus tag: NAREPO1_02140
so part of: sequence
location: 191641..191723
location: region:191641-191723:1
so has part: feature:191641-191723:1:exon
subclass of: SO_0000663

position:191641:1
position: 191641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191723:1
position: 191723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191641-191723:1:exon

NAREPO1_RS01070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS01070
old locus tag: NAREPO1_02140
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:191676..191678,aa:Leu,seq:tag)
SIO_010081: NAREPO1_RS01070
subclass of: SO_0000673
so part of: NAREPO1_RS01070
location: 191641..191723
location: region:191641-191723:1
so has part: feature:191641-191723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191641-191723:1:exon

NAREPO1_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01075
old locus tag: NAREPO1_02150
so part of: sequence
location: 191741..191812
location: region:191741-191812:1
so has part: feature:191741-191812:1:exon
subclass of: SO_0000663

position:191741:1
position: 191741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191812:1
position: 191812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191741-191812:1:exon

NAREPO1_RS01075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 650377
locus tag: NAREPO1_RS01075
old locus tag: NAREPO1_02150
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:191774..191776,aa:Gln,seq:ttg)
SIO_010081: NAREPO1_RS01075
subclass of: SO_0000673
so part of: NAREPO1_RS01075
location: 191741..191812
location: region:191741-191812:1
so has part: feature:191741-191812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191741-191812:1:exon

NAREPO1_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: xth
locus tag: NAREPO1_RS01080
old locus tag: NAREPO1_02160
so part of: sequence
location: 191841..192650
location: region:191841-192650:1
so has part: feature:191841-192650:1:exon
subclass of: SO_0000010

position:191841:1
position: 191841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192650:1
position: 192650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191841-192650:1:exon

NAREPO1_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: xth
locus tag: NAREPO1_RS01080
old locus tag: NAREPO1_02160
EC number: 3.1.11.2
inference: COORDINATES: protein motif:HMM:TIGR00195.1
GO function: GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MKIISFNINGIRSNIKQLENIIYLYDPDIIGLQETKISNNLFPIKYFNKYGYNNIYCNGNKNHFGVALISKIKPNNIYYNFLNSDTDFKYRIIIGEFYIKNKYLLIINIYVPQGDNIKNKIKFNYKLSFLNKFIHYVKSIINCKNLYILIIGDMNILNKKIDIGIENKILVKMIKNKICPFTLLEKKIFIKILNCGLIDIYRNKYFKCKKFTWFSFKNNNFIENKGLRIDYMFSNKILFDLCDYIDIKYEIKFSKKTSDHIPILSKFLI
SIO_010081: NAREPO1_RS01080
subclass of: SO_0000673
so part of: NAREPO1_RS01080
location: 191841..192650
location: region:191841-192650:1
so has part: feature:191841-192650:1:exon

WP_130624162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191841-192650:1:exon

NAREPO1_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: map
locus tag: NAREPO1_RS01085
old locus tag: NAREPO1_02170
so part of: sequence
location: complement(192703..193470)
location: region:192703-193470:-1
so has part: feature:192703-193470:-1:exon
subclass of: SO_0000010

position:192703:-1
position: 192703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193470:-1
position: 193470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192703-193470:-1:exon

NAREPO1_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: map
locus tag: NAREPO1_RS01085
old locus tag: NAREPO1_02170
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001018195.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MINLKTDLCKMRLVGKIASKILEDIEYYIKPGISTGKIDELCNNFIKNNNAKSATFNYMGYPKNICTSINNVVCHGIPSYKKIIKIGDIINIDISLEKDGFYSDTSKMFIVKKTNSIGRKICDVAKKSLYLAIKIIKPGIKLREIGKTIQKFVEYNGFSVVRDYCGHGIGKKLHEYPQVLHYDSLTQDNIILEPGMCITIEPMINSGSYKTKIMKDGWTVKTKDNSLSAQYEHTIVITEKGFEVTTLRSYENIYF
SIO_010081: NAREPO1_RS01085
subclass of: SO_0000673
so part of: NAREPO1_RS01085
location: complement(192703..193470)
location: region:192703-193470:-1
so has part: feature:192703-193470:-1:exon

WP_130624163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192703-193470:-1:exon

NAREPO1_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpsB
locus tag: NAREPO1_RS01090
old locus tag: NAREPO1_02180
so part of: sequence
location: 193566..194237
location: region:193566-194237:1
so has part: feature:193566-194237:1:exon
subclass of: SO_0000010

position:193566:1
position: 193566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194237:1
position: 194237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193566-194237:1:exon

NAREPO1_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpsB
locus tag: NAREPO1_RS01090
old locus tag: NAREPO1_02180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070196.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MKNNISIENMFNNYVHYGHSIKNWNPKMKKYIYGIHNGIHIINLDKTLVLFNIALKKIKNIINNNGKILFVGTKKEAKEKIKYYAESCNQFFINNRWLGGTLTNWKTIKKSIKKYKLLYNNYKNLQFNKFTKKESIIYLRNLNKLKKNLYGIQNMNKLPDAIFVIDANYEKIAIKESIKMNIPIFSIVDTDSNPDYIDYIIPGNDDSIKSIDFYLSSIYKILK
SIO_010081: NAREPO1_RS01090
subclass of: SO_0000673
so part of: NAREPO1_RS01090
location: 193566..194237
location: region:193566-194237:1
so has part: feature:193566-194237:1:exon

WP_130624164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193566-194237:1:exon

NAREPO1_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: tsf
locus tag: NAREPO1_RS01095
old locus tag: NAREPO1_02190
so part of: sequence
location: 194242..195039
location: region:194242-195039:1
so has part: feature:194242-195039:1:exon
subclass of: SO_0000010

position:194242:1
position: 194242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195039:1
position: 195039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194242-195039:1:exon

NAREPO1_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: tsf
locus tag: NAREPO1_RS01095
old locus tag: NAREPO1_02190
inference: COORDINATES: protein motif:HMM:TIGR00116.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MYYKNLKKLRELTNINIIDCKKALDESNNDINTAILILKKYENNFNIKNNNLYNSSYKYGIIISEVNENNDYGFIMKLLSNNDLVLKNDNVLNFYKKVSNFCISNKIKDFDIIRNNFNLEYKKLIFKLKENLIIKDFKYLEGNLIKNYVHINKRGVIVNFKSFNNIDNNFNILKFILMQIIFSNPIYIYKSDIKKNDINNIRNIIINKYKDKKINENNLIEEKINHFLKEKILEEQIFIMDNNLKMKDLFYKYEIKIDKFKMLNI
SIO_010081: NAREPO1_RS01095
subclass of: SO_0000673
so part of: NAREPO1_RS01095
location: 194242..195039
location: region:194242-195039:1
so has part: feature:194242-195039:1:exon

WP_130624165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194242-195039:1:exon

NAREPO1_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01100
old locus tag: NAREPO1_02200
so part of: sequence
location: 195057..195629
location: region:195057-195629:1
so has part: feature:195057-195629:1:exon
subclass of: SO_0000010

position:195057:1
position: 195057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195629:1
position: 195629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195057-195629:1:exon

NAREPO1_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01100
old locus tag: NAREPO1_02200
inference: COORDINATES: protein motif:HMM:NF013891.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MNNLEKIIQELNSIIYKKINDFKDFVNKIHIDKMSTCLVNNIKIDIDNNKTKKKIYEISNINLLNNNSIEIIPNDKKNLKYIYISLNKNNYLDFNISKNNKSIILTTNFITIEKKKKIINFINKELEFAKINIRNIRRDFNNKIKYLLKTNKLSEDNKNFLLKKIDININNFIYELDLFFLNKKNKFLKT
SIO_010081: NAREPO1_RS01100
subclass of: SO_0000673
so part of: NAREPO1_RS01100
location: 195057..195629
location: region:195057-195629:1
so has part: feature:195057-195629:1:exon

WP_130624166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195057-195629:1:exon

NAREPO1_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: uppS
locus tag: NAREPO1_RS01105
old locus tag: NAREPO1_02210
so part of: sequence
location: 195653..196405
location: region:195653-196405:1
so has part: feature:195653-196405:1:exon
subclass of: SO_0000010

position:195653:1
position: 195653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196405:1
position: 196405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195653-196405:1:exon

NAREPO1_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: uppS
locus tag: NAREPO1_RS01105
old locus tag: NAREPO1_02210
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053756.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl diphosphate synthase
translation: MMNRNLYLNKLKKIKNIINHVAIIADGNGRWANINGKSRYFGHKEGLKSIMKIINISIYYHIKALTLYVFSTENWKRPETEVNYLMDLFKKTLKKQIYKLNNKNIKLNIIGEKIEFNKELRTYIYESENITKNNTGLILNIAANYGGKWDIIQCIKKIFYKIKNKKISIEDINESIINKNISTYNSPPIDLLIRTGGELRISNFLLWQIAYSELYFTKTLWPDFDKFNFEEALISFYKRTRKFGNLINKG
SIO_010081: NAREPO1_RS01105
subclass of: SO_0000673
so part of: NAREPO1_RS01105
location: 195653..196405
location: region:195653-196405:1
so has part: feature:195653-196405:1:exon

WP_130624167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195653-196405:1:exon

NAREPO1_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: bamA
locus tag: NAREPO1_RS01110
old locus tag: NAREPO1_02220
so part of: sequence
location: 196411..198783
location: region:196411-198783:1
so has part: feature:196411-198783:1:exon
subclass of: SO_0000010

position:196411:1
position: 196411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198783:1
position: 198783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196411-198783:1:exon

NAREPO1_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: bamA
locus tag: NAREPO1_RS01110
old locus tag: NAREPO1_02220
inference: COORDINATES: protein motif:HMM:TIGR03303.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MIKKIIKNIIFFIILINIFFNNILYADDNNKFLIKKINIIGVNNFSKDIIENKIKNYKNKNISKSDIKNIIKYLYDTKLFNNIKIDIKNNDLIIYINENKLINNIKFFNNKLLNNTELINILKKFNLNNNEIFNEKNLFDFKKEIKKIYINNGKFFFNIEDIIENINNNKINITLFFNEGEFTKINNVNIEGNRLLNKKSILNILDINYGLFKTVYNKNKLLNNLLKLNLIYKKKGYLNFSINKLNTKFIEKNNSIDIDLVINEGKIFLINKFIVNGNYNELHKLDINSLCNFKKNEIYNYKKIYNVKNKIKNFLLKKGYKNPKINILISNLNKNKCTLDINVEIDIQDKLNIRNIKIYGNKKTLDKVLKNKMKQKEKTEFNIFQTKSDILELNKFKYFNKINIYTKKIYKIDNLIDLIYFVKEPYVNNFSVGANLNSKTLNFECNYNNINWLGSGNSLLLKAIYNDPKYFLSCDIKNPYNLLKNNKQYECKIFDNLNTVNNNSDVLRIKDSGLSSSINNNINDKINTENRLCFSTRTINFNEFEENINEIIKKNIFNDNIPKNIIDLNKSDKYIKFNKIDLFTKMKYIYNVNKYKEKYLNISFSTDNNLLPFGINLYRLLFEYLNNNKINDYISLKNEIIFFIMPDINNKIPFYEYGLIKNYIDNIRGFKSNCIEEIDYSNIDENCENLNILKNNSKINIINEIYLPIELIFNNIKDFLKISLFIDSSNNLYLGNNIFKNILSFHDHMSFGINAKINLKIGNINTSYSIPIKYCDSNNIINFQFKFNRK
SIO_010081: NAREPO1_RS01110
subclass of: SO_0000673
so part of: NAREPO1_RS01110
location: 196411..198783
location: region:196411-198783:1
so has part: feature:196411-198783:1:exon

WP_130624168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196411-198783:1:exon

NAREPO1_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: dnaE
locus tag: NAREPO1_RS01115
old locus tag: NAREPO1_02230
so part of: sequence
location: 198793..201558
location: region:198793-201558:1
so has part: feature:198793-201558:1:exon
subclass of: SO_0000010

position:198793:1
position: 198793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201558:1
position: 201558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198793-201558:1:exon

NAREPO1_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: dnaE
locus tag: NAREPO1_RS01115
old locus tag: NAREPO1_02230
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004226.0
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MNKFIHLKVHSEYSIIDSIIKIENLIKKIKLFNMKSVAINDFYNFFGLIKFYEESCKNEIKPIIGIDILINNDFDNNNNNNYCYLTLIACNLLGYKNIISIISESYIKSKKKYNKYPIVNNDILFKYKDEIIVLSGGINGYIGKSIINNNNNNNLKKYINLYLKTFKDKFYLEISRIGLKNEELYINESKIISKKYNISIVATNNVIFINKNEFDIHNIKILINKNIHGIKNNYTVNQYLKSEEEMNNLFLDIPEAIINTFEIYKRCNVILNFDKYYLPKFYKKFKSTEKILYRYSKYKLYKKINEKDNNIDYKKHKIYYDRLYKEIKIINKMGFSGYFLIVMEFIKWSKNNDIPVGPGRGSGTGSLVSYVLNITELDPIKFNLIFERFLNPNRLSMPDFDIDFCVKKRDFVINHIINKYSINNVARIITFNSMTAKSSIKDVGRVLNYPYGFINKITNIIPNIPGMTISKCFKINEFMNLYNENDEIKYLIDVSIKLEGIIKGIGKHAGGIVITPCKITNLIPVYYDNIYNCYITQFDKNDIEKSGLVKFDFLGLKTLSLIDETIKLINIRYNKNININKISLSDKNSFNLLKLGLTNAIFQLESKGIKNIIKKINPNKFEEIIDIIALFRPGPIKSKMVDNYINRKNKKEKIYYPSMDIKSNILKKILYSTYGIILYQEQIIEIAQKFSNYSIIEADLFRIAISKKNTKEMRKQKEKFINGIILKNNNMNYNTSEKIFNIIEKFSGYGFNKSHSTAYAMIAYQTLWLKSNYKKEFMLSIMNLEINNNSKIINLIKECNNLNIKINKININSSKYEFYINKNNEIEYGLGFIKGISENIIKKIIDNRIKYGIYKNMLDFSTRVNLSKIGKKNLEILINNNIINFEKIKNINDFINKYFNISKQYFNNINNKQINLFKNLI
SIO_010081: NAREPO1_RS01115
subclass of: SO_0000673
so part of: NAREPO1_RS01115
location: 198793..201558
location: region:198793-201558:1
so has part: feature:198793-201558:1:exon

WP_130624169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198793-201558:1:exon

NAREPO1_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01120
old locus tag: NAREPO1_02240
so part of: sequence
location: 201727..201933
location: region:201727-201933:1
so has part: feature:201727-201933:1:exon
subclass of: SO_0000010

position:201727:1
position: 201727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201933:1
position: 201933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201727-201933:1:exon

NAREPO1_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01120
old locus tag: NAREPO1_02240
inference: COORDINATES: similar to AA sequence:RefSeq:NP_310560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MRIKGQVKWFNESKGFGFITPSDGTKDVFVHFSSIQGSGFKTLSEGQDVEFEIQESQKGPSAINVTTL
SIO_010081: NAREPO1_RS01120
subclass of: SO_0000673
so part of: NAREPO1_RS01120
location: 201727..201933
location: region:201727-201933:1
so has part: feature:201727-201933:1:exon

WP_130624170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201727-201933:1:exon

NAREPO1_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01125
old locus tag: NAREPO1_02250
so part of: sequence
location: complement(202006..202407)
location: region:202006-202407:-1
so has part: feature:202006-202407:-1:exon
subclass of: SO_0000010

position:202006:-1
position: 202006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202407:-1
position: 202407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202006-202407:-1:exon

NAREPO1_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01125
old locus tag: NAREPO1_02250
inference: COORDINATES: protein motif:HMM:NF015567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIAILLCTHGRLSIYLMKSLEIILGKQNNFSCIYLDSDNDSNKYINNIFVKKIEELNIKNGIICVTDIFGGSLFNISYNILKEKKYKFSIISGINLPMLIDFFMNKNNKSIKTITKSLIEIGKNSIKNINNF
SIO_010081: NAREPO1_RS01125
subclass of: SO_0000673
so part of: NAREPO1_RS01125
location: complement(202006..202407)
location: region:202006-202407:-1
so has part: feature:202006-202407:-1:exon

WP_130624171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202006-202407:-1:exon

NAREPO1_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01130
old locus tag: NAREPO1_02260
so part of: sequence
location: 202438..203064
location: region:202438-203064:1
so has part: feature:202438-203064:1:exon
subclass of: SO_0000010

position:202438:1
position: 202438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203064:1
position: 203064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202438-203064:1:exon

NAREPO1_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01130
old locus tag: NAREPO1_02260
inference: COORDINATES: protein motif:HMM:NF013012.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKNILYIYTSKLKCNILLLYNNNIIKSKKYSYKNHLNVILKELNNIIKNNNININNINLISSINDPINISSIKFGLSISQGLSIGLNIPLIKLSLYEIILYKIKKKNIKNNNNNNILIIINITNNTFLLVICKLKLNKYKIKKYIYNLKEIINYIIYNQNINWIINTNNFKNKIKNFIYNKKIKFINYGYTNNEIIFDIINEKINIL
SIO_010081: NAREPO1_RS01130
subclass of: SO_0000673
so part of: NAREPO1_RS01130
location: 202438..203064
location: region:202438-203064:1
so has part: feature:202438-203064:1:exon

WP_130624172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202438-203064:1:exon

NAREPO1_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01135
old locus tag: NAREPO1_02270
so part of: sequence
location: complement(203051..204331)
location: region:203051-204331:-1
so has part: feature:203051-204331:-1:exon
subclass of: SO_0000010

position:203051:-1
position: 203051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204331:-1
position: 204331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203051-204331:-1:exon

NAREPO1_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01135
old locus tag: NAREPO1_02270
inference: COORDINATES: protein motif:HMM:TIGR00231.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKIKISLIGKSKVGKTFLFNRLTSSKSIISNIKGTTRDREYKNFIYKENIIIIDTGSLIDNPREFNENIYKQTKMAILESNIIFFIVEFFNFNKIDFEIFNYIKKFNKEIILIINKIDLKKYKENYNFNSLNILYTYYVSVKKNIGMKNIFKYIINLDVKKKTFNKSINIINDINMLILGKFNSGKSTFINKILKNDRLVVSNCKGTTLNNIDTYLIYKNYKFIFTDTFGVDDIEHKKKYNNYILNIHKKYDFIIYIIDMNNILSNKDIFFIQKIYKLDKLILIFNKIDCLDKFCILNYKKEISNKLYYIINNIRIFYISALHNNVDFIVKYIYKLFIKYKIKIKTKTINTLLQKSNLLFNIYSKKEIKPKLKYAYILSNKKPFKIIIYGKNINYININHKKFLKNFFIKNLNLKNNFIEFYFKEY
SIO_010081: NAREPO1_RS01135
subclass of: SO_0000673
so part of: NAREPO1_RS01135
location: complement(203051..204331)
location: region:203051-204331:-1
so has part: feature:203051-204331:-1:exon

WP_130624173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203051-204331:-1:exon

NAREPO1_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01140
old locus tag: NAREPO1_02280
so part of: sequence
location: complement(204362..205651)
location: region:204362-205651:-1
so has part: feature:204362-205651:-1:exon
subclass of: SO_0000010

position:204362:-1
position: 204362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205651:-1
position: 205651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204362-205651:-1:exon

NAREPO1_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01140
old locus tag: NAREPO1_02280
inference: COORDINATES: protein motif:HMM:NF012796.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP phosphoribosyltransferase regulatory subunit
translation: MKNIKKIKGFKDYDYIYLFRWNIILNEIKKIVISYGYNEIIFPLLEYDYLFKNSIGLNNNLINQMFYIKNKNFVLRPEGTSCCIRFGLENGFFRGQKNKWWYFGPMFRYENTQLGRYREFYQFGIECFGYDSIGIDIELILIINKFLKKIKIINEIILEINYIGINYINLYKNDIINFLIKNKEIFGNLNINNINNNPFNILESKYNIGCNNIKNFILKNCPKITKYFTIKDYIYFKYFRKLLYLNKINFYYNPFLFRGINYYSKIIFEYKSNYLNGLSICSGGRYDNLCNKLNNKYNISSVGLAIGWNRLLLILDNKYKKKNNLYLKNKYNIYISLIKFKSLKFTIYISEKIRFLYPKLKILVDYSFSNIKNKIKIIKKNNIYISLIINKKNNINEIFLFNKNVMIEKISFNNLKKIIDKLNFFFKYN
SIO_010081: NAREPO1_RS01140
subclass of: SO_0000673
so part of: NAREPO1_RS01140
location: complement(204362..205651)
location: region:204362-205651:-1
so has part: feature:204362-205651:-1:exon

WP_130624174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204362-205651:-1:exon

NAREPO1_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01145
old locus tag: NAREPO1_02290
so part of: sequence
location: complement(205689..207599)
location: region:205689-207599:-1
so has part: feature:205689-207599:-1:exon
subclass of: SO_0000010

position:205689:-1
position: 205689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207599:-1
position: 207599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205689-207599:-1:exon

NAREPO1_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01145
old locus tag: NAREPO1_02290
EC number: 6.1.1.14
inference: COORDINATES: protein motif:HMM:NF014183.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MIKNKNNLLLEIYIENIPNNFVISLSNIFFDYFTNKIKNNFYINDNIEYISTNKRLGFIIKNFLIKKNVNLTKNIKIYKIVKENILDSINYILKKFNIMKWNNSNIFFIRPIRNILLLFNNKILKIKIFNLESNNFTYKNFFDKENKIIINNIKNYYLFLRKNNIIINFNDRKFKIKKYIEAIEKKLNGNIIINNALLKKISYLYENPNIFYIKIYNNLFIDKNIMINILYKYYNYLLIMSNLNNKLLPYIVCVSNIKINKNIKYHYKNIIINYFKKIKILFNLDKRYLLLNNFDKFKKIIFRKEFGSMYHKILRITNISFLLSKKSNLNIDYKKINLSCFLYKNDINSNLVKEFFCMKGYINSYFLNLNKNINKDIIILIKEQCNINYIKNNKLNYLSFLILLVDKIDNIVCNLYFYFLKNKNNLDNDPFFIKKDINFIINILLKNDFYFDINYTVRKLILYTRKYNKDLYYNVNFNKYLFFIKKIIFIRFKLFFLKINKNKHLVNFLITKNIKIFNINLILNIIKKYNNEFKFISIIFKRIINLLKKNKNKIKINNYKFYYNNLSKLEKKFLNILLYIEKIIKKKDNDSKFNLIILNLFKLSNFIKYLLNKIIVINNNNLIYLLFKYINFINKI
SIO_010081: NAREPO1_RS01145
subclass of: SO_0000673
so part of: NAREPO1_RS01145
location: complement(205689..207599)
location: region:205689-207599:-1
so has part: feature:205689-207599:-1:exon

WP_130624175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205689-207599:-1:exon

NAREPO1_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01150
old locus tag: NAREPO1_02300
so part of: sequence
location: complement(207586..208458)
location: region:207586-208458:-1
so has part: feature:207586-208458:-1:exon
subclass of: SO_0000010

position:207586:-1
position: 207586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208458:-1
position: 208458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207586-208458:-1:exon

NAREPO1_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01150
old locus tag: NAREPO1_02300
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015396523.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MKTFENIIFLLKKYWSKKKCIVIQPYDLEIGAGTLHPITFFRGINKEKTNFVYVQPCRRPNDSKPYKNFYKRFYYFQLQVIIKPVPENIQYLYIESLKYIGINLKLNNIDFLEDNWENPTLSAWGIGWEIHINGLEVSQFTYFQQIGGINCNPIMIEITYGLERLSLIIQKKNNISDILWSKNNNLKYGNIFDSYEKEFSIYNLKLFNKKFLFNIFNEYKKNINALFLLKKKLILPTYEYILKLIHIFNMIDAKYFFSIFEKKSNIIYIQNLSKKIANIYYKSINKYDKK
SIO_010081: NAREPO1_RS01150
subclass of: SO_0000673
so part of: NAREPO1_RS01150
location: complement(207586..208458)
location: region:207586-208458:-1
so has part: feature:207586-208458:-1:exon

WP_130624176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207586-208458:-1:exon

NAREPO1_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01155
old locus tag: NAREPO1_02310
so part of: sequence
location: complement(208500..209594)
location: region:208500-209594:-1
so has part: feature:208500-209594:-1:exon
subclass of: SO_0000010

position:208500:-1
position: 208500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209594:-1
position: 209594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208500-209594:-1:exon

NAREPO1_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01155
old locus tag: NAREPO1_02310
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MLKIFNFIFLFIFIKNKFFFNKNKTIINNVLYITLRNKKFFITNNKLYLYKSIYLIKYNLYYIFIFKLINFFFKLKLICNNSYINNKQQNNIKKVNYNNIYKKCSYDFIKNNFKIFFLNKVINDNNYLLINFIVDENFINFLLKLGIKNNDIYYIINIIKKCVNLNSILKKKCFLLLETEKYNNYLYKYRSFLLIKFNIKNKSYIVIKKNNKFNLIILKLKNKFIGFPVKDKFKISSKFNLQRLNPITNKLSPHKGIDIAVPLNTPIFSVDFGIIIEVSYNKYAGNYVIIKHNDKYTTKYMHLDKIFVYKNKLVKKNELIGLSGNSGKSTGPHLHFEFWINNIAVDPIKIYFYYFLNNIFKIIN
SIO_010081: NAREPO1_RS01155
subclass of: SO_0000673
so part of: NAREPO1_RS01155
location: complement(208500..209594)
location: region:208500-209594:-1
so has part: feature:208500-209594:-1:exon

WP_130624177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208500-209594:-1:exon

NAREPO1_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ruvC
locus tag: NAREPO1_RS01160
old locus tag: NAREPO1_02320
so part of: sequence
location: complement(209611..210084)
location: region:209611-210084:-1
so has part: feature:209611-210084:-1:exon
subclass of: SO_0000010

position:209611:-1
position: 209611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210084:-1
position: 210084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209611-210084:-1:exon

NAREPO1_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ruvC
locus tag: NAREPO1_RS01160
old locus tag: NAREPO1_02320
EC number: 3.1.21.10
inference: COORDINATES: protein motif:HMM:TIGR00228.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MILISIDPGSNNIGYCILYFDKNNITYLTSNSIKVNDNIFIYKLKFIYFKIMDILKYFNPKQSAIEKIFVGKNINSSLKLCQARTVIMLALINFNIPIFEYNSKQIKKYSLNNIYSNKFYTRFFVKNIFNLYNVPSSDEADSISIGITHIKNFNFNK
SIO_010081: NAREPO1_RS01160
subclass of: SO_0000673
so part of: NAREPO1_RS01160
location: complement(209611..210084)
location: region:209611-210084:-1
so has part: feature:209611-210084:-1:exon

WP_130624178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209611-210084:-1:exon

NAREPO1_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: aspS
locus tag: NAREPO1_RS01165
old locus tag: NAREPO1_02330
so part of: sequence
location: complement(210124..211779)
location: region:210124-211779:-1
so has part: feature:210124-211779:-1:exon
subclass of: SO_0000010

position:210124:-1
position: 210124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211779:-1
position: 211779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210124-211779:-1:exon

NAREPO1_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: aspS
locus tag: NAREPO1_RS01165
old locus tag: NAREPO1_02330
EC number: 6.1.1.12
inference: COORDINATES: protein motif:HMM:NF001750.0
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MRKLFCKDIKNIYLNKKIILYGWIQNKIIFKNFIVIILRDNSGTIKLNILKENFKLYILNIIYNLNIESCIKIIGLVFLNSKHIIEINVKKFFLISKSDKLPIDINNKNISEKNKLKFRYLYLRRSNILNNLKIKSKIIWYINYFMNKNKYIYIETPILSKPTLEGANNFLIRNYLKNKYMALSQSPQIFKQMLMISGVNKYYQLAKCFRNEDLRKDRQPEFTQLDIESSFVNEDYIINLSNKLICFLFKKILNIDVKNNILEINYNKSIEMYGSEKPDLRNPLKIYNLVNILIENNFYIENNHDFIYIIPIKNNIDIKNNYNYILNYFKDIKCYIVNKFKFNEEILKIKINFINNFNINIIKNIFINSIENYNYSFFIVFISSYDCIFNIGKFIKNLSIKLNLINKKVYSLLWIKYFPMFVKKNNNYECVHHPFTSPKFFNKNIDIIKDPDKIISNSYDLIINGVEIASGSVRINNQILQRKVFNILNISKKDQNKNFGFFLNSLKYGTPPHSGIAFGLDRLIMVMKNIDNIKDVIAFPKSSSFYDFITE
SIO_010081: NAREPO1_RS01165
subclass of: SO_0000673
so part of: NAREPO1_RS01165
location: complement(210124..211779)
location: region:210124-211779:-1
so has part: feature:210124-211779:-1:exon

WP_130624179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210124-211779:-1:exon

NAREPO1_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01170
old locus tag: NAREPO1_02340
so part of: sequence
location: complement(211928..212614)
location: region:211928-212614:-1
so has part: feature:211928-212614:-1:exon
subclass of: SO_0000010

position:211928:-1
position: 211928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212614:-1
position: 212614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211928-212614:-1:exon

NAREPO1_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01170
old locus tag: NAREPO1_02340
inference: COORDINATES: protein motif:HMM:NF025973.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III domain-containing protein
translation: MNFLKIENKLKYIFKNKNLLLQAISHKSYTNLNNERLEFLGDSILNFIFSKYLYDKYINFSEGDMSKIRSFLINSKLILKISKKIKLNNFIRYKNLNNISNSIIENTFESIIAAIYLDSNYNLIKVEEFIINIYIKYLKLISNISLKIVKNFKSNLQEICNKLSSCPVYSVDKILLNKKYNKKIFYVKCDLIINNIKLSKIAFGLNIKDAEKLFAKKMISFMKYKKII
SIO_010081: NAREPO1_RS01170
subclass of: SO_0000673
so part of: NAREPO1_RS01170
location: complement(211928..212614)
location: region:211928-212614:-1
so has part: feature:211928-212614:-1:exon

WP_130624180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211928-212614:-1:exon

NAREPO1_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: lepB
locus tag: NAREPO1_RS01175
old locus tag: NAREPO1_02350
so part of: sequence
location: complement(212633..213250)
location: region:212633-213250:-1
so has part: feature:212633-213250:-1:exon
subclass of: SO_0000010

position:212633:-1
position: 212633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213250:-1
position: 213250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212633-213250:-1:exon

NAREPO1_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: lepB
locus tag: NAREPO1_RS01175
old locus tag: NAREPO1_02350
EC number: 3.4.21.89
inference: COORDINATES: protein motif:HMM:TIGR02227.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MINFLFIILNIKKKIYFLFKKIIIFIIKENYFLLFIIFIKLFIFDIFYIPSMSMYPTLKPGDIILVNKFIYNIKIPIINYIINIKNPNKNDIVVFKYPFNKNINYVKRIKGVPGDKIENINNLLYLKNNNYINLNLNFFNLFKINYIIFNIPNNYYFLLGDNINNSYDSRYWGLLHKNLLIGKVVYKIFNINFINKLILNFFLIK
SIO_010081: NAREPO1_RS01175
subclass of: SO_0000673
so part of: NAREPO1_RS01175
location: complement(212633..213250)
location: region:212633-213250:-1
so has part: feature:212633-213250:-1:exon

WP_130624181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212633-213250:-1:exon

NAREPO1_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ung
locus tag: NAREPO1_RS01180
old locus tag: NAREPO1_02360
so part of: sequence
location: 213311..213976
location: region:213311-213976:1
so has part: feature:213311-213976:1:exon
subclass of: SO_0000010

position:213311:1
position: 213311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213976:1
position: 213976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213311-213976:1:exon

NAREPO1_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: ung
locus tag: NAREPO1_RS01180
old locus tag: NAREPO1_02360
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087816.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MKITWNKIFKIEKEKKYFKKIKKYIYISKKNKKIIYPNNEDIFNAFKLTKFNNIKIVIIGQDPYYKKNQANGLSFSVNKNIMIPPSLKNIYTELKRDLNNFKYPNHGYLKKWSTQGILLLNLILTVEEKKPLSHEFIGWKIFTKRIINIINIYKSNIIFLLWGNYVKNNILNIINKKKHYILQTSHPSPLSFRNGFYGCSHFSKVNNILKYNKKKIIDWQI
SIO_010081: NAREPO1_RS01180
subclass of: SO_0000673
so part of: NAREPO1_RS01180
location: 213311..213976
location: region:213311-213976:1
so has part: feature:213311-213976:1:exon

WP_130624182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213311-213976:1:exon

NAREPO1_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: grpE
locus tag: NAREPO1_RS01185
old locus tag: NAREPO1_02370
so part of: sequence
location: complement(213985..214545)
location: region:213985-214545:-1
so has part: feature:213985-214545:-1:exon
subclass of: SO_0000010

position:213985:-1
position: 213985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214545:-1
position: 214545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213985-214545:-1:exon

NAREPO1_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: grpE
locus tag: NAREPO1_RS01185
old locus tag: NAREPO1_02370
inference: COORDINATES: protein motif:HMM:NF010748.0
GO function: GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MFEKDINDKNDNINNDIINNENNDINSCDKCKSIILDLEKKIDENEKEYFDKILRLNAELENIDKRSKIEIDKIYKFSLEKFFTEFLEVIDNLERTEKELENDKIDINIIKEGIILTLKMLIQITNKFGLIVIDKINVIFDPNIHQAILTIKNESLEDNLVTEIIQKGYILNNRLIRPAMVKVSKK
SIO_010081: NAREPO1_RS01185
subclass of: SO_0000673
so part of: NAREPO1_RS01185
location: complement(213985..214545)
location: region:213985-214545:-1
so has part: feature:213985-214545:-1:exon

WP_130624183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213985-214545:-1:exon

NAREPO1_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
locus tag: NAREPO1_RS01190
old locus tag: NAREPO1_02380
so part of: sequence
location: 214691..215128
location: region:214691-215128:1
so has part: feature:214691-215128:1:exon
subclass of: SO_0000010

position:214691:1
position: 214691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215128:1
position: 215128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214691-215128:1:exon

NAREPO1_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
locus tag: NAREPO1_RS01190
old locus tag: NAREPO1_02380
inference: COORDINATES: protein motif:HMM:NF013804.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein
translation: MKKNNVIIKNKNIYKYIIDYEIDAGIVLLGWEVKSLRYKKVDINNSNIIIKNNEIYLIDSKFNLNLYKEKKIDYSTNRIKKLLLNKKEIYKLYSKLKNKIIYIFPIYIFWNNNYAKLKIGIGKKNNNYKKKNKLNNKKNILNYLY
SIO_010081: NAREPO1_RS01190
subclass of: SO_0000673
so part of: NAREPO1_RS01190
location: 214691..215128
location: region:214691-215128:1
so has part: feature:214691-215128:1:exon

WP_130624184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214691-215128:1:exon

NAREPO1_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: ssrA
locus tag: NAREPO1_RS01195
old locus tag: NAREPO1_02390
so part of: sequence
location: 215172..215535
location: region:215172-215535:1
so has part: feature:215172-215535:1:exon
subclass of: SO_0000659

position:215172:1
position: 215172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215535:1
position: 215535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215172-215535:1:exon

NAREPO1_RS01195
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 650377
gene: ssrA
locus tag: NAREPO1_RS01195
old locus tag: NAREPO1_02390
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NAREPO1_RS01195
subclass of: SO_0000673
so part of: NAREPO1_RS01195
location: 215172..215535
location: region:215172-215535:1
so has part: feature:215172-215535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215172-215535:1:exon

NAREPO1_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: metG
locus tag: NAREPO1_RS01200
old locus tag: NAREPO1_02400
so part of: sequence
location: 215554..217212
location: region:215554-217212:1
so has part: feature:215554-217212:1:exon
subclass of: SO_0000010

position:215554:1
position: 215554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217212:1
position: 217212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215554-217212:1:exon

NAREPO1_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: metG
locus tag: NAREPO1_RS01200
old locus tag: NAREPO1_02400
EC number: 6.1.1.10
inference: COORDINATES: protein motif:HMM:TIGR00398.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MIKNNNSIVYKKTILVTTAFPYSNGCLHLGHILENIQADIYVRFNKLINNNIYFISSDDSHGTPIMLKSIYLNINPNILIKFFYKNHKKIFKKYYINFDYYGKTHNKENYRLLIKIFSILKKKKMLINKKINQLYDEKKSMFLPDRMIIGICPICKSPNQYGDNCNLCNSVYNAIDLINPISVISKKKPIIKTSNHILFNINAIKNDILYTIKNDIKLQKSIFKKSIEWFYSKLKPWDISRDHPYFGFKIPNYHNKFFYVWLDATIGYISSSKTLFKYKNINYLDFWGKNSKYKICQFIGKDISYFHVLFLPAILICINFKKPDNIFIHGHLTIKNKKMSKSLFNYINANNFLKYIESDYIRYYFASKLSNKVIDINFDIYELTYKVNNILINKILNIGSRCSKLINIYYNNNIFYNKLIYKDNLYKDFIYISNYIWYMYENLEYYKIINIIEKLSDNINKYISINKPWSIKNNNTKIVLSTSINLFKIIIFYMKPIIPKIFLEIENFLNLKININNFYKIIPNNHKINNFSSKFIKIDINHLKNNLNKNLF
SIO_010081: NAREPO1_RS01200
subclass of: SO_0000673
so part of: NAREPO1_RS01200
location: 215554..217212
location: region:215554-217212:1
so has part: feature:215554-217212:1:exon

WP_130624185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215554-217212:1:exon

NAREPO1_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: mnmE
locus tag: NAREPO1_RS01205
old locus tag: NAREPO1_02410
so part of: sequence
location: complement(217264..218655)
location: region:217264-218655:-1
so has part: feature:217264-218655:-1:exon
subclass of: SO_0000010

position:217264:-1
position: 217264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218655:-1
position: 218655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217264-218655:-1:exon

NAREPO1_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: mnmE
locus tag: NAREPO1_RS01205
old locus tag: NAREPO1_02410
inference: COORDINATES: protein motif:HMM:TIGR00450.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MNKYFLNINDTIIAISTPIGKGGIGIIRISGSKSELISKIFFNKKLKPRYATFSIFINPYNNEKLDNGILILFKKPNSFTGEDVLEFQTHGNPIMLNYIIDIIIKKIKIRLSYPGEFSFRSYINNKINLDQSEAILNLINSESILSAKMSIKSLYNIFLEKLNIFLEKIDELHILLETYINFSEYDIDENYILKKINYIRNSLIQDINKNIENFNISKSIFNGIKISIIGDTNVGKSTLFNALINENKSIISNISGTTRDVVDYNLWINGILFNIYDTAGIRETNDKLELLGIEKTIEKIINSDHILYVIDKELNTKNINIDNIINNLLKNNNININNIKNIPYTIIKNKSDIYNEKICIKNINNINIIYISAKKKYGIKMLNKYLKFLIKKNIKNINFFINSRQIELLKKIINILNLSYLSNFVIFSKYIKDIKNLILDYINNNNKNENILEKIFSKFCIGK
SIO_010081: NAREPO1_RS01205
subclass of: SO_0000673
so part of: NAREPO1_RS01205
location: complement(217264..218655)
location: region:217264-218655:-1
so has part: feature:217264-218655:-1:exon

WP_130624186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217264-218655:-1:exon

NAREPO1_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: yidC
locus tag: NAREPO1_RS01210
old locus tag: NAREPO1_02420
so part of: sequence
location: complement(218648..219298)
location: region:218648-219298:-1
so has part: feature:218648-219298:-1:exon
subclass of: SO_0000010

position:218648:-1
position: 218648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219298:-1
position: 219298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218648-219298:-1:exon

NAREPO1_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: yidC
locus tag: NAREPO1_RS01210
old locus tag: NAREPO1_02420
inference: COORDINATES: protein motif:HMM:TIGR03592.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0051205 - protein insertion into membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MSNLYHKYVTFYILKLLIIINNYVKNLGFSIIIIITLIKIITYPLVKYQFISYIKLNSLKSELNNINNCYKDNKNSRNEKILFLYKDKNINIIKNILFIFLQIPIFFSLYKIFTDFKEFDNKNFLWINNLLHKDPYFILPLLVGITIVFLQKNISDIIGNINLINIIIISILFTILFLFIPSGLVLYYLVNNIITIIQQIIILRNFNLKKNNINNE
SIO_010081: NAREPO1_RS01210
subclass of: SO_0000673
so part of: NAREPO1_RS01210
location: complement(218648..219298)
location: region:218648-219298:-1
so has part: feature:218648-219298:-1:exon

WP_130624187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218648-219298:-1:exon

NAREPO1_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rnpA
locus tag: NAREPO1_RS01215
old locus tag: NAREPO1_02430
so part of: sequence
location: complement(219310..219639)
location: region:219310-219639:-1
so has part: feature:219310-219639:-1:exon
subclass of: SO_0000010

position:219310:-1
position: 219310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219639:-1
position: 219639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219310-219639:-1:exon

NAREPO1_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rnpA
locus tag: NAREPO1_RS01215
old locus tag: NAREPO1_02430
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:NF013022.2
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MNTLKKKLIIRKKNDYIKLLTFSKKIILNYIIINYLKNNFNYPRIGFIIKKKIINKSFLRNYFKRILKEFFRKNKNRFENFDVLIIFKKSLLINKEYIIKDINNFLIKK
SIO_010081: NAREPO1_RS01215
subclass of: SO_0000673
so part of: NAREPO1_RS01215
location: complement(219310..219639)
location: region:219310-219639:-1
so has part: feature:219310-219639:-1:exon

WP_130624188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219310-219639:-1:exon

NAREPO1_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 650377
gene: rpmH
locus tag: NAREPO1_RS01220
old locus tag: NAREPO1_02440
so part of: sequence
location: complement(219636..219791)
location: region:219636-219791:-1
so has part: feature:219636-219791:-1:exon
subclass of: SO_0000010

position:219636:-1
position: 219636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219791:-1
position: 219791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219636-219791:-1:exon

NAREPO1_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 650377
gene: rpmH
locus tag: NAREPO1_RS01220
old locus tag: NAREPO1_02440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015799436.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPSKIKRIRKLGFRSRMSTKSGRKIISNRRKKGRLHLIPKVIKYHK
SIO_010081: NAREPO1_RS01220
subclass of: SO_0000673
so part of: NAREPO1_RS01220
location: complement(219636..219791)
location: region:219636-219791:-1
so has part: feature:219636-219791:-1:exon

WP_130624189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219636-219791:-1:exon