Agrobacterium pusense strain 76 plasmid pR76, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Genome Sequence of the Fungal Hyphae-colonizing Rhizobium radiobacter Strain 76
Submitted (18-MAY-2020) Biological Control Department, Institute of Plant Protection, CAAS, Yuanmingyuan West Road 2#, Haidian District, Beijing 100193, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP053858.1.\nBacteria and source DNA available from Biocontrol of soil borne\ndiseases lab, Institute of Plant Protection, Chinese Academy of\nAgricultural Sciences, Beijing.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 27-APR-2020\nAssembly Method :: SOAPdenovo v. 2.04; SPAdes v. 3.13.0\nAssembly Name :: RRad_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 500.0x\nSequencing Technology :: Illumina HiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/14/2023 10:19:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,109\nCDSs (total) :: 5,039\nGenes (coding) :: 4,977\nCDSs (with protein) :: 4,977\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 4\nPseudo Genes (total) :: 62\nCDSs (without protein) :: 62\nPseudo Genes (ambiguous residues) :: 0 of 62\nPseudo Genes (frameshifted) :: 35 of 62\nPseudo Genes (incomplete) :: 38 of 62\nPseudo Genes (internal stop) :: 6 of 62\nPseudo Genes (multiple problems) :: 16 of 62\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_003518687.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006699339.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637019.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015679.2
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01414.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015474 - autotransporter activity [Evidence IEA]
GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006311657.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010974577.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020050408.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017960886.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006312289.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011652406.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017960883.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_003593926.1
COORDINATES: similar to AA sequence:RefSeq:WP_014330274.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003510092.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018493363.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010023905.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: protein motif:HMM:NF025091.2
GO:0003824 - catalytic activity [Evidence IEA]
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007877755.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018009520.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003551657.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006699331.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518564.1
COORDINATES: similar to AA sequence:RefSeq:WP_007245658.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003426794.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602824.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020180625.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501657.1
GO:0004519 - endonuclease activity [Evidence IEA]
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010875315.1
COORDINATES: similar to AA sequence:RefSeq:WP_019486363.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067170.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564803.1
COORDINATES: similar to AA sequence:RefSeq:WP_010875061.1
COORDINATES: similar to AA sequence:RefSeq:WP_011632475.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011632474.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009943523.1
COORDINATES: similar to AA sequence:RefSeq:WP_020457345.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013637122.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637098.1
COORDINATES: similar to AA sequence:RefSeq:WP_004946529.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019565586.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013637126.1
COORDINATES: similar to AA sequence:RefSeq:WP_018322920.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020808231.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637129.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013637130.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013637131.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637132.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637133.1
COORDINATES: similar to AA sequence:RefSeq:WP_012776672.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808334.1
COORDINATES: protein motif:HMM:NF012273.2
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020808336.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006461157.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808338.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996681.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016554985.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020808341.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808342.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808345.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808346.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020808351.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808352.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808353.1
COORDINATES: similar to AA sequence:RefSeq:WP_017965601.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808355.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808356.1
COORDINATES: similar to AA sequence:RefSeq:WP_017965597.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996700.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808359.1
COORDINATES: similar to AA sequence:RefSeq:WP_014075398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007614168.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808362.1
COORDINATES: similar to AA sequence:RefSeq:WP_016556323.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808364.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808365.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017965578.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808367.1
COORDINATES: similar to AA sequence:RefSeq:WP_007812049.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808368.1
COORDINATES: similar to AA sequence:RefSeq:WP_018901722.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808371.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF019174.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808375.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576085.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808376.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_020808377.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808382.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996706.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808384.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808385.1
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808386.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808387.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808388.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982997.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018641315.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019404093.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015343296.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559271.1
COORDINATES: similar to AA sequence:RefSeq:WP_015724452.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002723625.1
COORDINATES: similar to AA sequence:RefSeq:WP_007648404.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842703.1
COORDINATES: similar to AA sequence:RefSeq:WP_020039798.1
glutathione S-transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020811848.1
COORDINATES: similar to AA sequence:RefSeq:WP_003530773.1
GO:0016740 - transferase activity [Evidence IEA]
lipid A biosynthesis lauroyl acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018045496.1
urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013168907.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter permease subunit UrtB
COORDINATES: similar to AA sequence:RefSeq:WP_007558356.1
urea ABC transporter permease subunit UrtC
COORDINATES: similar to AA sequence:RefSeq:WP_020184733.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter ATP-binding protein UrtD
COORDINATES: similar to AA sequence:RefSeq:WP_020184732.1
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: similar to AA sequence:RefSeq:WP_010684480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015457100.1
catalyzes the transfer of electrons from NADH to ubiquinone; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007699532.1
COORDINATES: similar to AA sequence:RefSeq:WP_032490240.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660588.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093680.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010660590.1
GO:0000334 - 3-hydroxyanthranilate 3,4-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010660591.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660592.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_010660593.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093677.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012093676.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093674.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093670.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660603.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018699793.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611246.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017183759.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011427389.1
COORDINATES: similar to AA sequence:RefSeq:WP_003070863.1
GO:0005324 - long-chain fatty acid transporter activity [Evidence IEA]; GO:0004467 - long-chain fatty acid-CoA ligase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_018063064.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_006462387.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007762429.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008597793.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008968197.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006226416.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF023594.2
COORDINATES: similar to AA sequence:RefSeq:WP_008968199.1
COORDINATES: similar to AA sequence:RefSeq:WP_007755724.1
organic hydroperoxide resistance protein
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_020664510.1
COORDINATES: similar to AA sequence:RefSeq:WP_020163984.1
COORDINATES: similar to AA sequence:RefSeq:WP_018075966.1
COORDINATES: similar to AA sequence:RefSeq:WP_008066910.1
COORDINATES: similar to AA sequence:RefSeq:WP_019105366.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018271192.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_018901444.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338331.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003517453.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565667.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565668.1
COORDINATES: similar to AA sequence:RefSeq:WP_019945739.1
COORDINATES: similar to AA sequence:RefSeq:WP_018099081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637155.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637156.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF018264.2
COORDINATES: similar to AA sequence:RefSeq:WP_020808316.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637125.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565587.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637163.1
COORDINATES: similar to AA sequence:RefSeq:WP_015341832.1
COORDINATES: similar to AA sequence:RefSeq:WP_011650956.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017990688.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808320.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551225.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551227.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019565597.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637171.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565600.1
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003519150.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678471.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551240.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519145.1
COORDINATES: similar to AA sequence:RefSeq:WP_003580260.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519141.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519139.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519137.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558208.1
COORDINATES: similar to AA sequence:RefSeq:WP_006311376.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808154.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517579.1
COORDINATES: similar to AA sequence:RefSeq:WP_006697910.1
COORDINATES: similar to AA sequence:RefSeq:WP_010972696.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010972695.1
COORDINATES: similar to AA sequence:RefSeq:WP_010972694.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517573.1
COORDINATES: similar to AA sequence:RefSeq:WP_019566342.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010972692.1
COORDINATES: similar to AA sequence:RefSeq:WP_006697904.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_006697903.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006699140.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006699139.1
COORDINATES: similar to AA sequence:RefSeq:WP_018210454.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495540.1
COORDINATES: similar to AA sequence:RefSeq:WP_018210455.1
COORDINATES: similar to AA sequence:RefSeq:WP_018210456.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699134.1
COORDINATES: similar to AA sequence:RefSeq:WP_018210458.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0019580 - galactarate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010974433.1
YMGG-like glycine zipper-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008523320.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650505.1
COORDINATES: similar to AA sequence:RefSeq:WP_006313258.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551617.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018070949.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595341.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003595339.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018899367.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390563.1
COORDINATES: similar to AA sequence:RefSeq:WP_007826392.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095341.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017959652.1
COORDINATES: protein motif:HMM:NF025137.2
COORDINATES: protein motif:HMM:NF019016.2
COORDINATES: similar to AA sequence:RefSeq:WP_015729913.1
COORDINATES: similar to AA sequence:RefSeq:WP_012536168.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563825.1
COORDINATES: similar to AA sequence:RefSeq:WP_009096804.1
COORDINATES: similar to AA sequence:RefSeq:WP_012332323.1
COORDINATES: similar to AA sequence:RefSeq:WP_018064123.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899788.1
COORDINATES: similar to AA sequence:RefSeq:WP_010487160.1
COORDINATES: similar to AA sequence:RefSeq:WP_008207459.1
COORDINATES: similar to AA sequence:RefSeq:WP_003590941.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: protein motif:HMM:NF017934.2
COORDINATES: similar to AA sequence:RefSeq:WP_008106353.1
malto-oligosyltrehalose trehalohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013532337.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550707.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699083.1
CGNR zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006699082.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699081.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699080.1
COORDINATES: similar to AA sequence:RefSeq:WP_019567255.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548655.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699077.1
UBP-type zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006699076.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674007.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012557603.1
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010974603.1
COORDINATES: similar to AA sequence:RefSeq:WP_017963371.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808140.1
COORDINATES: similar to AA sequence:RefSeq:WP_018068460.1
COORDINATES: similar to AA sequence:RefSeq:WP_020048036.1
COORDINATES: protein motif:HMM:NF018527.2
COORDINATES: protein motif:HMM:NF024934.2
COORDINATES: similar to AA sequence:RefSeq:WP_008598268.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602363.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1
COORDINATES: similar to AA sequence:RefSeq:WP_009337883.1
COORDINATES: similar to AA sequence:RefSeq:WP_020809046.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003504636.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003504637.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003504639.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811073.1
COORDINATES: similar to AA sequence:RefSeq:WP_020809041.1
COORDINATES: similar to AA sequence:RefSeq:WP_006280770.1
nitric oxide reductase activation protein NorD
COORDINATES: similar to AA sequence:RefSeq:WP_010973800.1
COORDINATES: similar to AA sequence:RefSeq:WP_007608449.1
COORDINATES: similar to AA sequence:RefSeq:WP_002966338.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020811067.1
COORDINATES: similar to AA sequence:RefSeq:WP_020010314.1
COORDINATES: similar to AA sequence:RefSeq:WP_003520964.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811065.1
COORDINATES: similar to AA sequence:RefSeq:WP_003504659.1
COORDINATES: similar to AA sequence:RefSeq:WP_003504669.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020811062.1
COORDINATES: similar to AA sequence:RefSeq:WP_020809032.1
COORDINATES: similar to AA sequence:RefSeq:WP_007877599.1
COORDINATES: similar to AA sequence:RefSeq:WP_003504678.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020809030.1
COORDINATES: similar to AA sequence:RefSeq:WP_020809029.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811056.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811055.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003504687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973819.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase, NapE protein
COORDINATES: similar to AA sequence:RefSeq:WP_020811053.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020010330.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967653.1
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_020479568.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003504700.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974608.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312951.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006699059.1
COORDINATES: similar to AA sequence:RefSeq:WP_017270994.1
magnesium and cobalt transport protein CorA
COORDINATES: similar to AA sequence:RefSeq:WP_013637316.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565689.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517409.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006724009.1
COORDINATES: similar to AA sequence:RefSeq:WP_003546544.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576948.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699034.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594536.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006699031.1
COORDINATES: similar to AA sequence:RefSeq:WP_003585969.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017958532.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958533.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_017969103.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_012559850.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559851.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559853.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559854.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969108.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_012559856.1
COORDINATES: similar to AA sequence:RefSeq:WP_003585988.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003498570.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969113.1
COORDINATES: similar to AA sequence:RefSeq:WP_003586014.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017969116.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969117.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559864.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958552.1
COORDINATES: similar to AA sequence:RefSeq:WP_020486314.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969123.1
COORDINATES: similar to AA sequence:RefSeq:WP_003586031.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559871.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559872.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007694651.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_016958492.1
COORDINATES: similar to AA sequence:RefSeq:WP_007599527.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490298.1
COORDINATES: similar to AA sequence:RefSeq:WP_007599529.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007636116.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007537818.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808204.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808203.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808202.1
COORDINATES: nucleotide motif:Rfam:14.4:RF03058
sul1 is cis-regulatory element that is thought to sense ions involved in sulfur or methionine metabolism; They are found in Alphaproteobacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010660388.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017991112.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020808183.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699027.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519215.1
COORDINATES: similar to AA sequence:RefSeq:WP_018114736.1
COORDINATES: similar to AA sequence:RefSeq:WP_011424577.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493252.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699022.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576998.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_010974355.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974356.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974357.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012654860.1
COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
COORDINATES: similar to AA sequence:RefSeq:WP_017988832.1
COORDINATES: similar to AA sequence:RefSeq:WP_008262237.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482330.1
COORDINATES: similar to AA sequence:RefSeq:WP_020048936.1
COORDINATES: similar to AA sequence:RefSeq:WP_013529210.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007768770.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015918470.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015918469.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018444940.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018444941.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015887386.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018481986.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516602.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245827.1
COORDINATES: similar to AA sequence:RefSeq:WP_018481989.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444948.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006449176.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012650059.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0006835 - dicarboxylic acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003518402.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016552143.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013529606.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008130726.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518393.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518391.1
COORDINATES: similar to AA sequence:RefSeq:WP_011471969.1
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_003518389.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518387.1
GO:0008152 - metabolic process [Evidence IEA]
This protein belongs to a clade of FMN-dependent monooxygenases, within a broader family of flavin-dependent oxidoreductases, the luciferase-like monooxygenase (LMM) family, some of whose members use coenzyme F420 rather than FMN; Derived by automated computational analysis using gene prediction method: Protein Homology.
NtaA/DmoA family FMN-dependent monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_003518385.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518382.1
COORDINATES: protein motif:HMM:NF019157.2
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003518380.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_017270789.1
COORDINATES: similar to AA sequence:RefSeq:WP_020009243.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808166.1
COORDINATES: similar to AA sequence:RefSeq:WP_017276664.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699012.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006699013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760334.1
TIGR03885 family FMN-dependent LLM class oxidoreductase
COORDINATES: protein motif:HMM:NF037968.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760461.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699016.1
COORDINATES: similar to AA sequence:RefSeq:WP_006700482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637609.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637610.1
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013637611.1
COORDINATES: similar to AA sequence:RefSeq:WP_006700485.1
COORDINATES: protein motif:HMM:NF037016.2
BapA prefix-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013637615.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010450898.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699359.1
COORDINATES: similar to AA sequence:RefSeq:WP_013637420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699356.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003519957.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555123.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991796.1
COORDINATES: similar to AA sequence:RefSeq:WP_010017635.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760535.1
COORDINATES: similar to AA sequence:RefSeq:WP_018116069.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699355.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519960.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519959.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790036.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: similar to AA sequence:RefSeq:WP_004682938.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540443.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315876.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006699344.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315880.1
COORDINATES: similar to AA sequence:RefSeq:WP_018093958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699341.1