Plasmodium gaboni strain SY75 chromosome 12, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003867.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
serine/threonine protein kinase, FIKK family
PHIST domain- and DNaJ domain-containing RESA- like protein
Plasmodium exported protein, unknown function
conserved Plasmodium membrane protein, unknown function
putative cytochrome c oxidase assembly protein COX19
encoded by transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
gap found within coding sequence; ortholog of PF3D7_1202300
part of same gene as PGSY75_1202300B; gap found within coding sequence
part of same gene as PGSY75_1202300A; gap found within coding sequence
conserved Plasmodium protein, unknown function
similar to DNA sequence:PlasmoDB:PF3D7_1203100
signal recognition particle subunit SRP14
eukaryotic translation initiation factor 5A
putative O-phosphoseryl-tRNA(Sec) selenium transferase
putative eukaryotic translation initiation factor 3 subunit 8
putative Tat binding protein 1(TBP-1)-interacting protein
putative DNA-directed RNA polymerase III subunit
putative eukaryotic translation initiation factor 5
putative small subunit rRNA processing factor
putative tRNA delta(2)-isopentenylpyrophosphate transferase
gap found within coding sequence; ortholog of PF3D7_1207700
part of same gene as PGSY75_1207700A; gap found within coding sequence
part of same gene as PGSY75_1207700B; gap found within coding sequence
putative apicoplast ribosomal protein L29 precursor
putative mitochondrial import inner membrane translocase subunit TIM10
ortholog of PF3D7_1208800; Starts late compared with Pf3D7
putative U6 snRNA-associated Sm-like protein LSm7
putative zinc finger transcription factor
putative cytosolic iron-sulfur protein assembly protein 1
putative ATP synthase mitochondrial F1 complex assembly factor 1
putative 50S ribosomal protein L1, apicoplast
putative general transcription factor 3C polypeptide 5
similar to DNA sequence:PlasmoDB:PF3D7_1210800
putative mitochondrial ribosomal protein S18 precursor
putative lysine-specific histone demethylase 1
putative DNA replication licensing factor MCM5
putative tetratricopeptide repeat family protein
glycerol-3-phosphate 1-O-acyltransferase
putative eukaryotic translation initiation factor 3 subunit 10
iron-sulfur subunit of succinate dehydrogenase
unknown; annotated by similarity to unknown transcript annotated in Pf3D7
putative integral membrane protein GPR180
putative phosphatidylinositol-glycan biosynthesis class O protein
putative histone-lysine N-methyltransferase
putative geranylgeranyl transferase type2 beta subunit
putative glycerol-3-phosphate dehydrogenase
signal recognition particle subunit SRP19
cell traversal protein for ookinetes and sporozoites
similar to DNA sequence:PlasmoDB:PF3D7_1216800
putative snoRNA-associated small subunit rRNA processing protein
putative anaphase promoting complex subunit 10
thrombospondin-related apical membrane protein
EMP1-like protein, putative; syntenic with PF3D7_1219500; exon 2 fragment
putative D-ribulose-5-phosphate 3-epimerase
hypothetical protein; ortholog of PF3D7_1220200
putative debranching enzyme-associated ribonuclease
putative ribosome biogenesis protein TSR3
histone-lysine N-methyltransferase, H3 lysine-4 specific
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
putative inner membrane complex protein 1h
similar to DNA sequence:PlasmoDB:PF3D7_1222200
cAMP-dependent protein kinase regulatory subunit
putative phospholipid-transporting ATPase
putative haloacid dehalogenase-like hydrolase
putative histone S-adenosyl methyltransferase
putative T-complex protein 1, gamma subunit
putative thioredoxin-like associated protein 1
putative subpellicular microtubule protein 2
putative serine/threonine protein kinase RIO1
putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2
putative phenylalanyl-tRNA synthetase alpha chain
dihydrolipoyl dehydrogenase, mitochondrial
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
putative pentatricopeptide repeat protein
putative homocysteine S-methyltransferase
putative DNA polymerase epsilon subunit b
V-type K+-independent H+-translocating inorganic pyrophosphatase
putative CCR4-NOT transcription complex subunit 4
ATP synthase subunit beta, mitochondrial
putative vesicle transport v-SNARE protein VTI1
putative protein-S-isoprenylcysteine O-methyltransferase
putative rRNA processing WD-repeat protein
similar to DNA sequence:PlasmoDB:PF3D7_1237900
similar to DNA sequence:PlasmoDB:PF3D7_1238000
putative sphingomyelin phosphodiesterase
putative mitochondrial ribosomal protein L23 precursor
ATP-dependent zinc metalloprotease FTSH 1
putative vacuolar protein sorting-associated protein 16
putative 3-hydroxyisobutyryl-coenzyme A hydrolase
putative DEAD/DEAH box ATP-dependent RNA helicase
putative tetratricopeptide repeat protein
putative queuine tRNA-ribosyltransferase
putative protein geranylgeranyltransferase type II, alpha subunit
putative ubiquitin-conjugating enzyme E2
double C2-like domain-containing protein
glucose inhibited division protein a-like protein
putative N-alpha-acetyltransferase 15, NatA auxiliary subunit
similar to DNA sequence:PlasmoDB:PF3D7_1244300
putative ADP-ribosylation factor GTPase-activating protein
putative cytoplasmic translation machinery associated protein
putative mitochondrial ribosomal protein L3 precursor
similar to DNA sequence:PlasmoDB:PF3D7_1245700
putative clathrin coat assembly protein AP180
gap found within coding sequence; ortholog of PF3D7_1246300
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_1246300B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_1246300A; gap found within coding sequence
signal recognition particle receptor, beta subunit
RAC-beta serine/threonine protein kinase
putative DNA replication origin binding protein
FK506-binding protein (FKBP)-type peptidyl- prolyl isomerase
putative serine/threonine protein kinase
putative nucleolar rRNA processing protein
putative 26S protease regulatory subunit 8
putative apicoplast dimethyladenosine synthase
putative vacuolar protein sorting-associated protein 26
putative eukaryotic translation initiation factor 2b, subunit 2