Plasmodium gaboni strain SY75 chromosome 8, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003863.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
von Willebrand factor A domain-related protein
conserved Plasmodium protein, unknown function
putative rRNA processing WD-repeat protein
gap found within coding sequence; ortholog of PF3D7_0802700
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0802700B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0802700A; gap found within coding sequence
putative serine/threonine protein phosphatase 2B catalytic subunit A
putative mitogen-activated protein kinase organizer 1
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
similar to DNA sequence:PlasmoDB:PF3D7_0803900
similar to DNA sequence:PlasmoDB:PF3D7_0804100
gap found within coding sequence; ortholog of PF3D7_0804500
conserved Plasmodium membrane protein, unknown function; part of same gene as PGSY75_0804500B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PGSY75_0804500A; gap found within coding sequence
putative U2 snRNA/tRNA pseudouridine synthase
serine/threonine protein kinase, FIKK family
conserved Plasmodium membrane protein, unknown function
putative glycosyltransferase family 28 protein
putative vacuolar proton translocating ATPase subunit A
putative proteasome subunit alpha type-6
gap found within coding sequence; ortholog of PF3D7_0807600
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0807600A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0807600B; gap found within coding sequence
putative 26S proteasome regulatory subunit RPN10
unknown; annotated by similarity to unknown transcript annotated in Pf3D7
putative histone acetyltransferase subunit NuA4
encoded by transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
putative histone-arginine methyltransferase
putative RNA-binding protein (U1 snRNP-like)
putative translation initiation factor SUI1
Contains in-frame UGA selenocysteine codon
putative eukaryotic translation initiation factor
putative vacuolar protein sorting-associated protein 9
putative nucleolar preribosomal assembly protein
putative vacuolar protein sorting-associated protein 2
putative trafficking protein particle complex subunit 2- like protein
putative meiotic recombination protein DMC1
putative protein kinase c inhibitor-like protein
similar to DNA sequence:PlasmoDB:PF3D7_0817500
putative U3 small nucleolar ribonucleoprotein
putative U6 snRNA-associated Sm-like protein LSm3
2-oxoglutarate dehydrogenase E1 component
putative ATP-dependent RNA helicase prh1
putative ribosomal RNA small subunit methyltransferase NEP1
protein transport protein SEC61 subunit beta
putative mitochondrial ribosomal protein L4 precursor
putative mediator of RNA polymerase II transcription subunit 7
putative small nuclear ribonucleoprotein G
membrane skeletal protein IMC1-like protein
putative Fe-S cluster assembly protein DRE2
putative translation initiation factor IF-3
putative dehydrodolichyl diphosphate synthetase
putative ubiquitin conjugation factor E4 B
similar to DNA sequence:PlasmoDB:PF3D7_0826800
putative ATP-dependent RNA helicase DBP10
putative translation initiation factor IF-2
putative apicoplast ribosomal protein L21 precursor
putative mitochondrial inner membrane protein OXA1
putative translation initiation factor EIF-2b alpha subunit
gap found within coding sequence; ortholog of PF3D7_0829100
part of same gene as PGSY75_0829100B; gap found within coding sequence
part of same gene as PGSY75_0829100A; gap found within coding sequence
putative U6 snRNA-associated Sm-like protein LSm8
putative prolyl 4-hydroxylase subunit alpha
Plasmodium exported protein, unknown function
surface-associated interspersed protein 8.1 (SURFIN 8.1)
gap found within coding sequence; ortholog of PF3D7_0831600
part of same gene as PGSY75_0831600B; gap found within coding sequence
part of same gene as PGSY75_0831600A; gap found within coding sequence